Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08593.t1 | KEH37878.1 | 43.8 | 550 | 190 | 14 | 1 | 516 | 1 | 465 | 9.70E-101 | 378.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08593.t1 | Q680K8 | 34.9 | 218 | 131 | 3 | 634 | 840 | 102 | 319 | 4.4e-25 | 118.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08593.t1 | A0A072V973 | 43.8 | 550 | 190 | 14 | 1 | 516 | 1 | 465 | 7.0e-101 | 378.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene08593.t1 | TR | TRAF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08593.t1 | MTR_2g450410 | 43.248 | 548 | 196 | 12 | 1 | 516 | 1 | 465 | 4.39e-123 | 379 |
MS.gene08593.t1 | MTR_0031s0120 | 46.903 | 339 | 154 | 9 | 270 | 603 | 65 | 382 | 9.37e-85 | 276 |
MS.gene08593.t1 | MTR_4g061490 | 33.109 | 595 | 255 | 11 | 47 | 604 | 28 | 516 | 4.96e-74 | 254 |
MS.gene08593.t1 | MTR_3g049960 | 37.500 | 472 | 203 | 13 | 176 | 643 | 44 | 427 | 1.66e-72 | 249 |
MS.gene08593.t1 | MTR_7g083690 | 51.440 | 243 | 112 | 4 | 364 | 602 | 176 | 416 | 6.96e-72 | 257 |
MS.gene08593.t1 | MTR_7g083690 | 39.259 | 135 | 52 | 3 | 142 | 275 | 70 | 175 | 3.91e-16 | 84.0 |
MS.gene08593.t1 | MTR_8g058470 | 59.770 | 174 | 64 | 2 | 409 | 580 | 38 | 207 | 4.88e-64 | 225 |
MS.gene08593.t1 | MTR_7g108760 | 59.770 | 174 | 64 | 2 | 409 | 580 | 38 | 207 | 5.46e-64 | 225 |
MS.gene08593.t1 | MTR_3g067565 | 54.585 | 229 | 83 | 7 | 1 | 227 | 16 | 225 | 3.10e-62 | 211 |
MS.gene08593.t1 | MTR_8g045280 | 33.833 | 600 | 293 | 22 | 2 | 545 | 6 | 557 | 1.34e-60 | 221 |
MS.gene08593.t1 | MTR_2g060030 | 34.750 | 541 | 248 | 14 | 2 | 510 | 9 | 476 | 4.26e-59 | 216 |
MS.gene08593.t1 | MTR_4g005250 | 39.233 | 339 | 140 | 8 | 209 | 526 | 67 | 360 | 2.22e-53 | 190 |
MS.gene08593.t1 | MTR_5g048260 | 60.000 | 130 | 52 | 0 | 365 | 494 | 106 | 235 | 2.87e-53 | 185 |
MS.gene08593.t1 | MTR_5g048260 | 45.143 | 175 | 81 | 4 | 113 | 286 | 20 | 180 | 2.52e-35 | 134 |
MS.gene08593.t1 | MTR_3g464880 | 41.935 | 279 | 119 | 9 | 140 | 415 | 39 | 277 | 4.07e-49 | 175 |
MS.gene08593.t1 | MTR_1148s0010 | 40.870 | 230 | 128 | 2 | 362 | 589 | 138 | 361 | 7.46e-49 | 183 |
MS.gene08593.t1 | MTR_1148s0010 | 45.000 | 80 | 44 | 0 | 143 | 222 | 13 | 92 | 9.15e-14 | 75.5 |
MS.gene08593.t1 | MTR_6g048830 | 34.894 | 235 | 148 | 3 | 367 | 599 | 44 | 275 | 9.17e-48 | 172 |
MS.gene08593.t1 | MTR_0073s0040 | 36.727 | 275 | 167 | 4 | 351 | 621 | 46 | 317 | 3.67e-47 | 172 |
MS.gene08593.t1 | MTR_6g045577 | 50.000 | 212 | 88 | 5 | 18 | 227 | 16 | 211 | 7.93e-47 | 168 |
MS.gene08593.t1 | MTR_5g049880 | 50.000 | 212 | 88 | 5 | 18 | 227 | 16 | 211 | 7.93e-47 | 168 |
MS.gene08593.t1 | MTR_3g048390 | 31.868 | 455 | 249 | 13 | 198 | 621 | 6 | 430 | 1.47e-46 | 173 |
MS.gene08593.t1 | MTR_0242s0010 | 29.825 | 456 | 250 | 9 | 144 | 587 | 103 | 500 | 2.02e-42 | 163 |
MS.gene08593.t1 | MTR_6g024400 | 28.330 | 533 | 286 | 15 | 178 | 684 | 107 | 569 | 1.45e-41 | 162 |
MS.gene08593.t1 | MTR_6g054900 | 37.634 | 186 | 112 | 1 | 360 | 545 | 31 | 212 | 1.50e-41 | 154 |
MS.gene08593.t1 | MTR_6g053340 | 55.556 | 117 | 52 | 0 | 423 | 539 | 153 | 269 | 2.22e-41 | 153 |
MS.gene08593.t1 | MTR_4g027930 | 39.779 | 181 | 94 | 1 | 359 | 539 | 1 | 166 | 5.93e-41 | 150 |
MS.gene08593.t1 | MTR_5g073130 | 36.967 | 211 | 124 | 2 | 374 | 580 | 163 | 368 | 2.89e-40 | 154 |
MS.gene08593.t1 | MTR_1g062580 | 30.400 | 500 | 233 | 18 | 1 | 435 | 1 | 450 | 1.09e-38 | 154 |
MS.gene08593.t1 | MTR_5g096790 | 34.035 | 285 | 167 | 6 | 575 | 843 | 42 | 321 | 9.37e-38 | 144 |
MS.gene08593.t1 | MTR_6g033695 | 34.244 | 476 | 215 | 19 | 2 | 408 | 6 | 452 | 2.08e-35 | 144 |
MS.gene08593.t1 | MTR_5g053650 | 32.819 | 259 | 158 | 5 | 365 | 620 | 5 | 250 | 1.03e-34 | 137 |
MS.gene08593.t1 | MTR_3g022785 | 27.818 | 417 | 197 | 9 | 144 | 556 | 138 | 454 | 3.66e-33 | 134 |
MS.gene08593.t1 | MTR_8g103960 | 54.545 | 99 | 45 | 0 | 439 | 537 | 2 | 100 | 2.87e-32 | 122 |
MS.gene08593.t1 | MTR_3g061090 | 32.900 | 231 | 141 | 4 | 622 | 840 | 20 | 248 | 2.14e-31 | 124 |
MS.gene08593.t1 | MTR_5g096700 | 34.685 | 222 | 133 | 4 | 631 | 840 | 41 | 262 | 7.62e-31 | 122 |
MS.gene08593.t1 | MTR_5g096700 | 34.685 | 222 | 133 | 4 | 631 | 840 | 100 | 321 | 1.97e-30 | 123 |
MS.gene08593.t1 | MTR_3g061090 | 32.900 | 231 | 141 | 4 | 622 | 840 | 92 | 320 | 2.79e-30 | 122 |
MS.gene08593.t1 | MTR_6g039210 | 33.229 | 319 | 157 | 11 | 151 | 437 | 118 | 412 | 4.88e-29 | 121 |
MS.gene08593.t1 | MTR_7g033825 | 32.599 | 227 | 113 | 3 | 360 | 586 | 34 | 220 | 1.15e-27 | 120 |
MS.gene08593.t1 | MTR_3g022950 | 34.572 | 269 | 121 | 8 | 144 | 405 | 142 | 362 | 1.19e-27 | 120 |
MS.gene08593.t1 | MTR_6g036830 | 65.854 | 82 | 28 | 0 | 142 | 223 | 230 | 311 | 1.26e-27 | 116 |
MS.gene08593.t1 | MTR_6g033770 | 64.865 | 74 | 26 | 0 | 154 | 227 | 1 | 74 | 1.39e-24 | 103 |
MS.gene08593.t1 | MTR_0406s0010 | 53.659 | 82 | 38 | 0 | 143 | 224 | 2 | 83 | 1.17e-23 | 99.0 |
MS.gene08593.t1 | MTR_1g029850 | 30.000 | 250 | 154 | 5 | 608 | 845 | 85 | 325 | 1.17e-21 | 97.4 |
MS.gene08593.t1 | MTR_2g056170 | 58.667 | 75 | 30 | 1 | 155 | 229 | 45 | 118 | 5.52e-21 | 92.8 |
MS.gene08593.t1 | MTR_3g088560 | 27.574 | 272 | 160 | 4 | 606 | 840 | 46 | 317 | 2.48e-20 | 93.6 |
MS.gene08593.t1 | MTR_3g088560 | 29.412 | 221 | 142 | 3 | 634 | 840 | 27 | 247 | 1.30e-19 | 89.7 |
MS.gene08593.t1 | MTR_6g052740 | 53.750 | 80 | 37 | 0 | 143 | 222 | 125 | 204 | 1.70e-19 | 90.9 |
MS.gene08593.t1 | MTR_3g088560 | 29.412 | 221 | 142 | 3 | 634 | 840 | 42 | 262 | 3.50e-19 | 89.0 |
MS.gene08593.t1 | MTR_3g088560 | 33.333 | 162 | 99 | 3 | 688 | 840 | 34 | 195 | 4.05e-19 | 87.0 |
MS.gene08593.t1 | MTR_5g054740 | 50.000 | 90 | 45 | 0 | 143 | 232 | 257 | 346 | 8.52e-19 | 92.0 |
MS.gene08593.t1 | MTR_5g054740 | 51.429 | 70 | 34 | 0 | 439 | 508 | 487 | 556 | 2.76e-18 | 90.5 |
MS.gene08593.t1 | MTR_4g056240 | 46.429 | 84 | 45 | 0 | 143 | 226 | 57 | 140 | 1.86e-18 | 87.4 |
MS.gene08593.t1 | MTR_1g033770 | 40.000 | 120 | 65 | 2 | 481 | 594 | 2 | 120 | 2.71e-18 | 89.4 |
MS.gene08593.t1 | MTR_7g050780 | 47.500 | 80 | 42 | 0 | 143 | 222 | 35 | 114 | 3.17e-17 | 79.3 |
MS.gene08593.t1 | MTR_0007s0010 | 73.469 | 49 | 13 | 0 | 179 | 227 | 63 | 111 | 1.32e-16 | 78.2 |
MS.gene08593.t1 | MTR_2g103400 | 32.812 | 128 | 86 | 0 | 399 | 526 | 139 | 266 | 5.33e-16 | 82.4 |
MS.gene08593.t1 | MTR_0347s0040 | 43.056 | 144 | 66 | 4 | 157 | 290 | 4 | 141 | 6.69e-16 | 77.4 |
MS.gene08593.t1 | MTR_7g113670 | 35.338 | 133 | 64 | 3 | 124 | 256 | 179 | 289 | 1.21e-15 | 79.3 |
MS.gene08593.t1 | MTR_6g453110 | 45.238 | 84 | 46 | 0 | 144 | 227 | 68 | 151 | 6.78e-15 | 76.3 |
MS.gene08593.t1 | MTR_5g021380 | 30.612 | 196 | 105 | 4 | 435 | 629 | 206 | 371 | 3.95e-14 | 77.4 |
MS.gene08593.t1 | MTR_4g044667 | 35.329 | 167 | 91 | 4 | 137 | 286 | 120 | 286 | 1.34e-13 | 73.9 |
MS.gene08593.t1 | MTR_5g065250 | 29.771 | 131 | 92 | 0 | 395 | 525 | 211 | 341 | 1.28e-11 | 68.9 |
MS.gene08593.t1 | MTR_1g033680 | 27.049 | 122 | 89 | 0 | 386 | 507 | 131 | 252 | 1.88e-11 | 68.2 |
MS.gene08593.t1 | MTR_1g035030 | 56.863 | 51 | 22 | 0 | 163 | 213 | 105 | 155 | 2.61e-11 | 66.2 |
MS.gene08593.t1 | MTR_1g024800 | 28.947 | 114 | 75 | 1 | 433 | 540 | 41 | 154 | 3.71e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08593.t1 | AT1G55760 | 34.862 | 218 | 131 | 3 | 634 | 840 | 102 | 319 | 3.96e-30 | 122 |
MS.gene08593.t1 | AT1G21780 | 29.218 | 243 | 151 | 3 | 610 | 840 | 83 | 316 | 1.05e-23 | 103 |
MS.gene08593.t1 | AT1G21780 | 29.218 | 243 | 151 | 3 | 610 | 840 | 83 | 316 | 1.05e-23 | 103 |
Find 231 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGCCAGGGTGGCAGATAC+TGG | 0.160858 | 4.1:+38502191 | MS.gene08593:CDS |
CAGGATCGGCATCAGGTTTC+TGG | 0.192463 | 4.1:+38502338 | MS.gene08593:CDS |
CGTTTATGTGTTTCTGGTTA+TGG | 0.220961 | 4.1:+38503490 | MS.gene08593:CDS |
GGATTGGGGATTGTCGGGTT+TGG | 0.281199 | 4.1:+38502705 | MS.gene08593:CDS |
GATTGGGGATTGTCGGGTTT+GGG | 0.282893 | 4.1:+38502706 | MS.gene08593:CDS |
TTCTCATCAATCTGTATCTA+AGG | 0.306209 | 4.1:+38503849 | MS.gene08593:CDS |
CTCTAAATAATGTGTGGATT+GGG | 0.314488 | 4.1:+38502690 | MS.gene08593:CDS |
TTGAACCAAGAGCAAACTTA+TGG | 0.314969 | 4.1:-38508809 | None:intergenic |
TCTTGGGAGAGCGGCGAAAT+AGG | 0.318715 | 4.1:+38502369 | MS.gene08593:CDS |
CAGCCAGGGTGGCAGATACT+GGG | 0.320187 | 4.1:+38502192 | MS.gene08593:CDS |
TGCATCTAAACAAACTATTA+TGG | 0.321751 | 4.1:+38508785 | MS.gene08593:CDS |
CCCTTCCTATCAGTCACCTT+CGG | 0.326703 | 4.1:-38502782 | None:intergenic |
TCCAATCCCTCATCAACATT+TGG | 0.327016 | 4.1:-38503733 | None:intergenic |
TATTAAAATGGTGGAGGAAT+GGG | 0.331983 | 4.1:+38503645 | MS.gene08593:CDS |
ATGCTAGAGGTCAGGAATTC+GGG | 0.333083 | 4.1:+38502621 | MS.gene08593:CDS |
GGGAAGGTGGTGACGGGTGC+AGG | 0.335024 | 4.1:+38503037 | MS.gene08593:CDS |
TTACTCCTATGGGCGGTGAT+AGG | 0.338497 | 4.1:+38503287 | MS.gene08593:CDS |
GGTTTCTGGAAGAGGTTTCT+TGG | 0.342458 | 4.1:+38502352 | MS.gene08593:CDS |
GGTTCAAGGGGAATGGGAAT+TGG | 0.344500 | 4.1:+38503759 | MS.gene08593:CDS |
GGGGCATGGTTGCGAGCTTA+TGG | 0.345284 | 4.1:+38503433 | MS.gene08593:CDS |
GGAGGAATGGGGCTGTCACT+TGG | 0.347274 | 4.1:+38503657 | MS.gene08593:CDS |
GTGTTTCTTAATTGTAATAA+TGG | 0.348013 | 4.1:+38503310 | MS.gene08593:CDS |
GGAGAATCTTTCCGAGCTAA+TGG | 0.351527 | 4.1:+38508690 | MS.gene08593:CDS |
AATGCTAGAGGTCAGGAATT+CGG | 0.353092 | 4.1:+38502620 | MS.gene08593:CDS |
CCTTCCTATCAGTCACCTTC+GGG | 0.355756 | 4.1:-38502781 | None:intergenic |
GAGGACTTACACTATTAAAA+TGG | 0.359772 | 4.1:+38503633 | MS.gene08593:CDS |
GGAGATAACAAGCTGAGAAT+TGG | 0.361097 | 4.1:+38502896 | MS.gene08593:CDS |
GGAGGTTGTTGTAACGGTTC+GGG | 0.362657 | 4.1:+38502919 | MS.gene08593:CDS |
TTATGTTGTGGTTACTCCTA+TGG | 0.366002 | 4.1:+38503276 | MS.gene08593:CDS |
GTCTGAGAGGCGGGAGCTCT+AGG | 0.368010 | 4.1:+38502102 | MS.gene08593:CDS |
CGAAACAAAGGCATGTTATC+CGG | 0.370634 | 4.1:-38502536 | None:intergenic |
TGATGTAATTGATCTGATAA+AGG | 0.372083 | 4.1:+38509001 | MS.gene08593:CDS |
CCAGTATCTGCCACCCTGGC+TGG | 0.373272 | 4.1:-38502191 | None:intergenic |
GTTGTAACGGTTCGGGAAGA+TGG | 0.375678 | 4.1:+38502926 | MS.gene08593:CDS |
GTCAGGAATTCGGGTTTGTT+AGG | 0.378613 | 4.1:+38502630 | MS.gene08593:CDS |
GAGATAACAAGCTGAGAATT+GGG | 0.379266 | 4.1:+38502897 | MS.gene08593:CDS |
GATAGACAGTGGGCTAGTTC+AGG | 0.380787 | 4.1:+38503181 | MS.gene08593:CDS |
CGGCATCAGGTTTCTGGAAG+AGG | 0.383238 | 4.1:+38502344 | MS.gene08593:CDS |
GTAATAATGGCAGAGACATT+TGG | 0.391795 | 4.1:+38503323 | MS.gene08593:CDS |
AGCCAGGGTGGCAGATACTG+GGG | 0.392303 | 4.1:+38502193 | MS.gene08593:CDS |
GAGGGAGTCGGAGGCGTGTT+AGG | 0.397165 | 4.1:+38502977 | MS.gene08593:CDS |
AATAACTCCTCACTATAATT+CGG | 0.404720 | 4.1:-38508960 | None:intergenic |
TTTCCGTAGAACTCTTGATA+TGG | 0.407271 | 4.1:+38509181 | MS.gene08593:CDS |
GCTGATGGAGGTAGGGAACG+TGG | 0.412583 | 4.1:+38502805 | MS.gene08593:CDS |
GTTTCTGGAAGAGGTTTCTT+GGG | 0.412858 | 4.1:+38502353 | MS.gene08593:CDS |
TGAACCAAGAGCAAACTTAT+GGG | 0.415322 | 4.1:-38508808 | None:intergenic |
GGGAGGTTGTTGTAACGGTT+CGG | 0.416651 | 4.1:+38502918 | MS.gene08593:CDS |
GGAAGAGGTTCAAGGGGAAT+GGG | 0.421227 | 4.1:+38503753 | MS.gene08593:CDS |
TGTGTGGATTGGGGATTGTC+GGG | 0.421945 | 4.1:+38502700 | MS.gene08593:CDS |
ATGGCCCATAAGTTTGCTCT+TGG | 0.423668 | 4.1:+38508804 | MS.gene08593:CDS |
TGGAAGAGGTTCAAGGGGAA+TGG | 0.423986 | 4.1:+38503752 | MS.gene08593:CDS |
CGAGGAACGGCGACAGGTTA+CGG | 0.431257 | 4.1:+38502314 | MS.gene08593:CDS |
GGAATTGGATAATTTAGTTA+CGG | 0.432293 | 4.1:+38503774 | MS.gene08593:CDS |
ATGTGTGGATTGGGGATTGT+CGG | 0.432390 | 4.1:+38502699 | MS.gene08593:CDS |
TTGATAGCAACAGTAATTGC+GGG | 0.433239 | 4.1:+38503205 | MS.gene08593:CDS |
AGGAAGGGGCTGATGGAGGT+AGG | 0.434297 | 4.1:+38502797 | MS.gene08593:CDS |
GATGCGACCTCCCACTTTGT+TGG | 0.443588 | 4.1:-38502435 | None:intergenic |
GTAAGGAGCGTCTGAGAGGC+GGG | 0.449527 | 4.1:+38502093 | MS.gene08593:CDS |
GCTCTAAATAATGTGTGGAT+TGG | 0.450921 | 4.1:+38502689 | MS.gene08593:CDS |
GAATAAGCATAAACTGTCTC+AGG | 0.451107 | 4.1:+38502667 | MS.gene08593:CDS |
TTACGGACAGGATCGGCATC+AGG | 0.458948 | 4.1:+38502331 | MS.gene08593:CDS |
TTACGGATTTGCAGCAAGAA+TGG | 0.459007 | 4.1:+38503791 | MS.gene08593:CDS |
GAGGGATTGGAAGAGGTTCA+AGG | 0.461543 | 4.1:+38503745 | MS.gene08593:CDS |
TCTCCCACAACTCTCTTCTC+TGG | 0.461958 | 4.1:-38502878 | None:intergenic |
TCTATGACTTGAAGACTTTG+AGG | 0.462188 | 4.1:+38509093 | MS.gene08593:CDS |
ATGGCATTCCCGTCCATGCT+TGG | 0.463826 | 4.1:+38503452 | MS.gene08593:CDS |
GCCAGGGTGGCAGATACTGG+GGG | 0.464200 | 4.1:+38502194 | MS.gene08593:CDS |
TACTCCTATGGGCGGTGATA+GGG | 0.466270 | 4.1:+38503288 | MS.gene08593:CDS |
TATGTTGTGGTTACTCCTAT+GGG | 0.466591 | 4.1:+38503277 | MS.gene08593:CDS |
GTGTGTGGATTCTAAAAGTA+AGG | 0.467659 | 4.1:+38503117 | MS.gene08593:CDS |
CTGCGGTGAGGTCGAGGAAG+AGG | 0.469229 | 4.1:+38502234 | MS.gene08593:CDS |
GGATTGGGGTCCAGCCAGGG+TGG | 0.472381 | 4.1:+38502181 | MS.gene08593:CDS |
GATCTTCGAGGAACGGCGAC+AGG | 0.472669 | 4.1:+38502308 | MS.gene08593:CDS |
CGTGGGTGTTAAGAAAGGTC+TGG | 0.477090 | 4.1:+38502823 | MS.gene08593:CDS |
CATAACCAGAAACACATAAA+CGG | 0.478345 | 4.1:-38503489 | None:intergenic |
GAGGGAGGAGGAGAAAAGTA+CGG | 0.480436 | 4.1:+38503006 | MS.gene08593:CDS |
GAAGAGGAAAGTGACTGAAC+AGG | 0.480516 | 4.1:+38502250 | MS.gene08593:CDS |
TCTTTGTCTCCTCGAATCAA+TGG | 0.480595 | 4.1:-38508744 | None:intergenic |
GGGCCAGAGAAGAGAGTTGT+GGG | 0.481083 | 4.1:+38502875 | MS.gene08593:CDS |
TTTGGAAACGATGGCGCTAC+CGG | 0.484496 | 4.1:-38503715 | None:intergenic |
GACTGATAGGAAGGGGCTGA+TGG | 0.485425 | 4.1:+38502790 | MS.gene08593:CDS |
GAGAAAAGTACGGAATTGAA+TGG | 0.488760 | 4.1:+38503016 | MS.gene08593:CDS |
AGGGATTGGAAGAGGTTCAA+GGG | 0.488863 | 4.1:+38503746 | MS.gene08593:CDS |
GTTAGGTGAGTTGAGGGAGG+AGG | 0.489908 | 4.1:+38502994 | MS.gene08593:CDS |
ATATTGATGTCGGGGACGAA+GGG | 0.492835 | 4.1:+38502854 | MS.gene08593:CDS |
CTATTAAAATGGTGGAGGAA+TGG | 0.493097 | 4.1:+38503644 | MS.gene08593:CDS |
TCCAAATGTTGATGAGGGAT+TGG | 0.494247 | 4.1:+38503732 | MS.gene08593:CDS |
GTGGGTGTTAAGAAAGGTCT+GGG | 0.494717 | 4.1:+38502824 | MS.gene08593:CDS |
TGTATCTAAGGTTGATAAAG+AGG | 0.496745 | 4.1:+38503861 | MS.gene08593:CDS |
ATAGGAGTAACCACAACATA+AGG | 0.496794 | 4.1:-38503274 | None:intergenic |
CATAATCATTATGTGCAAAC+CGG | 0.499721 | 4.1:-38502748 | None:intergenic |
AGATGAATGCACAGTAGATA+AGG | 0.500809 | 4.1:+38503528 | MS.gene08593:CDS |
CTATGACTTGAAGACTTTGA+GGG | 0.500931 | 4.1:+38509094 | MS.gene08593:CDS |
TTGAATGGGAAGGTGGTGAC+GGG | 0.501756 | 4.1:+38503031 | MS.gene08593:CDS |
TCATAAGTGGTCAGCGGAGG+CGG | 0.502953 | 4.1:+38503396 | MS.gene08593:CDS |
CCAGGGTGGCAGATACTGGG+GGG | 0.503159 | 4.1:+38502195 | MS.gene08593:CDS |
ATTGGACTGCGGTGAGGTCG+AGG | 0.505382 | 4.1:+38502228 | MS.gene08593:CDS |
ACCTCAATGTAGTATGCCTC+AGG | 0.505531 | 4.1:-38508529 | None:intergenic |
GAAACAAAGGCATGTTATCC+GGG | 0.505730 | 4.1:-38502535 | None:intergenic |
CGCTGACCACTTATGAACAT+TGG | 0.509694 | 4.1:-38503389 | None:intergenic |
ACATCGTAATGCTAGAGGTC+AGG | 0.511191 | 4.1:+38502613 | MS.gene08593:CDS |
ACCGCGTCGGAGTTTATCTC+CGG | 0.511472 | 4.1:+38502139 | MS.gene08593:CDS |
AGGCGTGTTAGGTGAGTTGA+GGG | 0.514091 | 4.1:+38502988 | MS.gene08593:CDS |
TTGTAACGGTTCGGGAAGAT+GGG | 0.514278 | 4.1:+38502927 | MS.gene08593:CDS |
TGTTGATGAGGGATTGGAAG+AGG | 0.515694 | 4.1:+38503738 | MS.gene08593:CDS |
AGGATCAACGTCGACGGGAC+AGG | 0.516350 | 4.1:+38502270 | MS.gene08593:CDS |
ACCTCATTCCAAGCATGGAC+GGG | 0.517562 | 4.1:-38503460 | None:intergenic |
ATCGCTTAAATCCATTAGCT+CGG | 0.517959 | 4.1:-38508701 | None:intergenic |
GTAACCCGAAGGTGACTGAT+AGG | 0.519380 | 4.1:+38502777 | MS.gene08593:CDS |
CAACAACGAGTCGAGGATGC+AGG | 0.522696 | 4.1:+38503247 | MS.gene08593:CDS |
TCTGATGATCCATTGATTCG+AGG | 0.522998 | 4.1:+38508735 | MS.gene08593:CDS |
CCCGAAGGTGACTGATAGGA+AGG | 0.524962 | 4.1:+38502781 | MS.gene08593:CDS |
AAATTTAAAGGAAACAATAC+AGG | 0.527641 | 4.1:+38503090 | MS.gene08593:CDS |
AGAAAAGTACGGAATTGAAT+GGG | 0.527723 | 4.1:+38503017 | MS.gene08593:CDS |
ATTGAATGGGAAGGTGGTGA+CGG | 0.530049 | 4.1:+38503030 | MS.gene08593:CDS |
TCTGAGAGGCGGGAGCTCTA+GGG | 0.534309 | 4.1:+38502103 | MS.gene08593:CDS |
ATGGGGCTGTCACTTGGGAG+AGG | 0.534427 | 4.1:+38503663 | MS.gene08593:CDS |
TTCGACACAGGCTGTAACAC+CGG | 0.534784 | 4.1:-38503922 | None:intergenic |
TCAATGTGCTCGTTTACTTG+TGG | 0.534848 | 4.1:+38509118 | MS.gene08593:CDS |
GAGGAATGGGGCTGTCACTT+GGG | 0.537395 | 4.1:+38503658 | MS.gene08593:CDS |
TTCGATACGAACGTGGGGCA+TGG | 0.537774 | 4.1:+38503419 | MS.gene08593:CDS |
AGGAGGGTTGACGAGGGAGT+CGG | 0.538614 | 4.1:+38502965 | MS.gene08593:CDS |
CGTGTTAGGTGAGTTGAGGG+AGG | 0.538793 | 4.1:+38502991 | MS.gene08593:CDS |
CTCGAGAGGCTAGGTATGAC+CGG | 0.538894 | 4.1:+38502729 | MS.gene08593:CDS |
AATATTGATGTCGGGGACGA+AGG | 0.544267 | 4.1:+38502853 | MS.gene08593:CDS |
GAGGCGTGTTAGGTGAGTTG+AGG | 0.545741 | 4.1:+38502987 | MS.gene08593:CDS |
AATTGGGGAGGTTGTTGTAA+CGG | 0.546256 | 4.1:+38502913 | MS.gene08593:CDS |
AAGGTGGTGACGGGTGCAGG+TGG | 0.552025 | 4.1:+38503040 | MS.gene08593:CDS |
TATAGTTGTCATATCTGAGA+TGG | 0.556735 | 4.1:-38508883 | None:intergenic |
TATCCATATCAAGAGTTCTA+CGG | 0.557020 | 4.1:-38509184 | None:intergenic |
GGTAAGGAGCGTCTGAGAGG+CGG | 0.558904 | 4.1:+38502092 | MS.gene08593:CDS |
GGAAGGGGCTGATGGAGGTA+GGG | 0.560525 | 4.1:+38502798 | MS.gene08593:CDS |
GACAGAGATTGAGTCTATAC+CGG | 0.561047 | 4.1:+38503696 | MS.gene08593:CDS |
TCGTTTCCAAATGTTGATGA+GGG | 0.561577 | 4.1:+38503727 | MS.gene08593:CDS |
ATCGTTTCCAAATGTTGATG+AGG | 0.562858 | 4.1:+38503726 | MS.gene08593:CDS |
TGAACAGGATCAACGTCGAC+GGG | 0.563096 | 4.1:+38502265 | MS.gene08593:CDS |
TCCCGTCCATGCTTGGAATG+AGG | 0.563363 | 4.1:+38503459 | MS.gene08593:CDS |
GGGTTTGGGCTCGAGAGGCT+AGG | 0.563877 | 4.1:+38502720 | MS.gene08593:CDS |
CTGATGGAGGTAGGGAACGT+GGG | 0.566704 | 4.1:+38502806 | MS.gene08593:CDS |
TTGTCGGGTTTGGGCTCGAG+AGG | 0.566742 | 4.1:+38502715 | MS.gene08593:CDS |
ATTAAAATGGTGGAGGAATG+GGG | 0.567267 | 4.1:+38503646 | MS.gene08593:CDS |
GGGGCCAGAGAAGAGAGTTG+TGG | 0.568649 | 4.1:+38502874 | MS.gene08593:CDS |
GACCTCATTCCAAGCATGGA+CGG | 0.568690 | 4.1:-38503461 | None:intergenic |
GGGAACGTGGGTGTTAAGAA+AGG | 0.570556 | 4.1:+38502818 | MS.gene08593:CDS |
AGGGTTGACGAGGGAGTCGG+AGG | 0.570589 | 4.1:+38502968 | MS.gene08593:CDS |
TCTAAATAATGTGTGGATTG+GGG | 0.571938 | 4.1:+38502691 | MS.gene08593:CDS |
CGAAGGTGACTGATAGGAAG+GGG | 0.576924 | 4.1:+38502783 | MS.gene08593:CDS |
TTGCAGCAGATGACAGAGGA+AGG | 0.577276 | 4.1:+38502393 | MS.gene08593:CDS |
GTCGCATCGCATCATCAGAA+TGG | 0.578960 | 4.1:+38502450 | MS.gene08593:CDS |
TCAAAGTCTTCAAGTCATAG+AGG | 0.581895 | 4.1:-38509091 | None:intergenic |
AAAAGACCTCATTCCAAGCA+TGG | 0.581932 | 4.1:-38503465 | None:intergenic |
TTAAAATCACTCGGTAGCAA+AGG | 0.583693 | 4.1:-38509237 | None:intergenic |
AACAATACAGGCAAAGTGTG+TGG | 0.585262 | 4.1:+38503102 | MS.gene08593:CDS |
TGAGATGGAAATACTATCAA+CGG | 0.585416 | 4.1:-38508868 | None:intergenic |
TTTGATAGCAACAGTAATTG+CGG | 0.588101 | 4.1:+38503204 | MS.gene08593:CDS |
ATGGGAAGAAACTGAAGGCA+AGG | 0.588987 | 4.1:+38502945 | MS.gene08593:CDS |
TACGGAATTGAATGGGAAGG+TGG | 0.589893 | 4.1:+38503024 | MS.gene08593:CDS |
CTCAGGCTCTAAATAATGTG+TGG | 0.591365 | 4.1:+38502684 | MS.gene08593:CDS |
TTACACTATTAAAATGGTGG+AGG | 0.592990 | 4.1:+38503639 | MS.gene08593:CDS |
TTCAGAGGATCTTCGAGGAA+CGG | 0.593122 | 4.1:+38502301 | MS.gene08593:CDS |
GACAGTATCTCCAACAAAGT+GGG | 0.596911 | 4.1:+38502425 | MS.gene08593:CDS |
AGATAACAAGCTGAGAATTG+GGG | 0.597459 | 4.1:+38502898 | MS.gene08593:CDS |
CCGAAGGTGACTGATAGGAA+GGG | 0.597533 | 4.1:+38502782 | MS.gene08593:CDS |
TGATAAAGGATATTGAGATA+AGG | 0.600618 | 4.1:+38509015 | MS.gene08593:CDS |
CGTCGACGGGACAGGTCAAG+AGG | 0.603100 | 4.1:+38502278 | MS.gene08593:CDS |
GAAGAGGTTTCTTGGGAGAG+CGG | 0.603706 | 4.1:+38502360 | MS.gene08593:CDS |
CATTTGGCAAGAGTTTAATG+AGG | 0.603970 | 4.1:+38503339 | MS.gene08593:CDS |
CAGGGTGGCAGATACTGGGG+GGG | 0.604492 | 4.1:+38502196 | MS.gene08593:CDS |
CTGAACAGGATCAACGTCGA+CGG | 0.604866 | 4.1:+38502264 | MS.gene08593:CDS |
AACGGCGACAGGTTACGGAC+AGG | 0.609886 | 4.1:+38502319 | MS.gene08593:CDS |
CTACGATATCGTGAGAGACG+AGG | 0.613258 | 4.1:+38508932 | MS.gene08593:CDS |
CTACACAGAATGTAATTGAG+AGG | 0.614219 | 4.1:+38509054 | MS.gene08593:CDS |
ATCATCAGAATGGCATGGCG+CGG | 0.615905 | 4.1:+38502460 | MS.gene08593:CDS |
TCTCCGGCAGAGAGATACCA+TGG | 0.615945 | 4.1:+38502155 | MS.gene08593:CDS |
GTGTTCAAAATCTCTAATTG+TGG | 0.619075 | 4.1:-38503586 | None:intergenic |
GACTTACACTATTAAAATGG+TGG | 0.619306 | 4.1:+38503636 | MS.gene08593:CDS |
GAAGGCAAGGAGGGTTGACG+AGG | 0.620236 | 4.1:+38502958 | MS.gene08593:CDS |
TGATAGCAACAGTAATTGCG+GGG | 0.620613 | 4.1:+38503206 | MS.gene08593:CDS |
GGACAGGTCAAGAGGTTCAG+AGG | 0.622301 | 4.1:+38502286 | MS.gene08593:CDS |
GAGGCGGTTCGATACGAACG+TGG | 0.623229 | 4.1:+38503412 | MS.gene08593:CDS |
CGACAGGTTACGGACAGGAT+CGG | 0.623360 | 4.1:+38502324 | MS.gene08593:CDS |
TCATCAACATTTGGAAACGA+TGG | 0.623481 | 4.1:-38503724 | None:intergenic |
AGCACGAATTTCTGTCCGAA+CGG | 0.623731 | 4.1:-38509159 | None:intergenic |
CTCCGGCAGAGAGATACCAT+GGG | 0.623955 | 4.1:+38502156 | MS.gene08593:CDS |
TGATAGGAAGGGGCTGATGG+AGG | 0.624747 | 4.1:+38502793 | MS.gene08593:CDS |
GAAGAAACTGAAGGCAAGGA+GGG | 0.624858 | 4.1:+38502949 | MS.gene08593:CDS |
TATTGATGTCGGGGACGAAG+GGG | 0.625982 | 4.1:+38502855 | MS.gene08593:CDS |
TGACAGTATCTCCAACAAAG+TGG | 0.629681 | 4.1:+38502424 | MS.gene08593:CDS |
ATCGCATCATCAGAATGGCA+TGG | 0.630424 | 4.1:+38502455 | MS.gene08593:CDS |
GCTCGACATCGTAATGCTAG+AGG | 0.630851 | 4.1:+38502608 | MS.gene08593:CDS |
AAGGTTGATAAAGAGGTGAA+CGG | 0.639443 | 4.1:+38503868 | MS.gene08593:CDS |
ATGCATTGAGGATAGACAGT+GGG | 0.639450 | 4.1:+38503171 | MS.gene08593:CDS |
AGAGGTAAGGAGCGTCTGAG+AGG | 0.639995 | 4.1:+38502089 | MS.gene08593:CDS |
AAGTACGGAATTGAATGGGA+AGG | 0.641333 | 4.1:+38503021 | MS.gene08593:CDS |
TTATGTTGTTTGTAACCCGA+AGG | 0.645511 | 4.1:+38502766 | MS.gene08593:CDS |
GGAACTTCAACAACGAGTCG+AGG | 0.646837 | 4.1:+38503240 | MS.gene08593:CDS |
GGGATTGGAAGAGGTTCAAG+GGG | 0.648152 | 4.1:+38503747 | MS.gene08593:CDS |
TGTTCATAAGTGGTCAGCGG+AGG | 0.649306 | 4.1:+38503393 | MS.gene08593:CDS |
TAATCTATAAATATTTGACA+TGG | 0.652304 | 4.1:-38508906 | None:intergenic |
CGGCAGAGAGATACCATGGG+GGG | 0.654413 | 4.1:+38502159 | MS.gene08593:CDS |
AGGCGGTTCGATACGAACGT+GGG | 0.659007 | 4.1:+38503413 | MS.gene08593:CDS |
AGAGGTTCAGAGGATCTTCG+AGG | 0.659642 | 4.1:+38502296 | MS.gene08593:CDS |
GGAAGATGGGAAGAAACTGA+AGG | 0.663495 | 4.1:+38502940 | MS.gene08593:CDS |
GGGTGTTAAGAAAGGTCTGG+GGG | 0.663664 | 4.1:+38502826 | MS.gene08593:CDS |
GGTGTACAACTCATGCATTG+AGG | 0.664394 | 4.1:+38503159 | MS.gene08593:CDS |
GCTTGACGTAAACGAAACAA+AGG | 0.664584 | 4.1:-38502548 | None:intergenic |
GGATAGGGGAAATTGGACTG+CGG | 0.664920 | 4.1:+38502217 | MS.gene08593:CDS |
GGCAGAGAGATACCATGGGG+GGG | 0.667921 | 4.1:+38502160 | MS.gene08593:CDS |
GCCTGAGGCATACTACATTG+AGG | 0.668232 | 4.1:+38508528 | MS.gene08593:CDS |
GGAAGAAACTGAAGGCAAGG+AGG | 0.673801 | 4.1:+38502948 | MS.gene08593:CDS |
AGGTTTGCAGCAGATGACAG+AGG | 0.674931 | 4.1:+38502389 | MS.gene08593:CDS |
AACACCCTATCACCGCCCAT+AGG | 0.674973 | 4.1:-38503292 | None:intergenic |
TCAATGCATGAGTTGTACAC+CGG | 0.675018 | 4.1:-38503157 | None:intergenic |
GGCGGTTCGATACGAACGTG+GGG | 0.675477 | 4.1:+38503414 | MS.gene08593:CDS |
CAATGTTCATAAGTGGTCAG+CGG | 0.678293 | 4.1:+38503390 | MS.gene08593:CDS |
TAACAAGCTGAGAATTGGGG+AGG | 0.680341 | 4.1:+38502901 | MS.gene08593:CDS |
GGATCTTCCGAATTATAGTG+AGG | 0.686527 | 4.1:+38508953 | MS.gene08593:CDS |
GATAGCAACAGTAATTGCGG+GGG | 0.687511 | 4.1:+38503207 | MS.gene08593:CDS |
GTGCTGTCTGACATTCAACA+AGG | 0.687994 | 4.1:+38502482 | MS.gene08593:CDS |
GTGTGATATTGAGCTGCCTG+AGG | 0.690565 | 4.1:+38508513 | MS.gene08593:CDS |
TTAGCTTCGAGCAACCGCGT+CGG | 0.692547 | 4.1:+38502126 | MS.gene08593:CDS |
GGGGAAATTGGACTGCGGTG+AGG | 0.694971 | 4.1:+38502222 | MS.gene08593:CDS |
AGTATCTCCAACAAAGTGGG+AGG | 0.703500 | 4.1:+38502428 | MS.gene08593:CDS |
TGGGTGTTAAGAAAGGTCTG+GGG | 0.705809 | 4.1:+38502825 | MS.gene08593:CDS |
GTTGTGGTTACTCCTATGGG+CGG | 0.709672 | 4.1:+38503280 | MS.gene08593:CDS |
AAGGCAAGGAGGGTTGACGA+GGG | 0.714754 | 4.1:+38502959 | MS.gene08593:CDS |
TCCGGCAGAGAGATACCATG+GGG | 0.722309 | 4.1:+38502157 | MS.gene08593:CDS |
CATGCATTGAGGATAGACAG+TGG | 0.748259 | 4.1:+38503170 | MS.gene08593:CDS |
GGTGTTAAGAAAGGTCTGGG+GGG | 0.750120 | 4.1:+38502827 | MS.gene08593:CDS |
CCGGCAGAGAGATACCATGG+GGG | 0.782535 | 4.1:+38502158 | MS.gene08593:CDS |
GCCGGAGATAAACTCCGACG+CGG | 0.783668 | 4.1:-38502140 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 38502086 | 38509253 | 38502086 | ID=MS.gene08593 |
chr4.1 | mRNA | 38502086 | 38509253 | 38502086 | ID=MS.gene08593.t1;Parent=MS.gene08593 |
chr4.1 | exon | 38502086 | 38503967 | 38502086 | ID=MS.gene08593.t1.exon1;Parent=MS.gene08593.t1 |
chr4.1 | CDS | 38502086 | 38503967 | 38502086 | ID=cds.MS.gene08593.t1;Parent=MS.gene08593.t1 |
chr4.1 | exon | 38508485 | 38508585 | 38508485 | ID=MS.gene08593.t1.exon2;Parent=MS.gene08593.t1 |
chr4.1 | CDS | 38508485 | 38508585 | 38508485 | ID=cds.MS.gene08593.t1;Parent=MS.gene08593.t1 |
chr4.1 | exon | 38508687 | 38509253 | 38508687 | ID=MS.gene08593.t1.exon3;Parent=MS.gene08593.t1 |
chr4.1 | CDS | 38508687 | 38509253 | 38508687 | ID=cds.MS.gene08593.t1;Parent=MS.gene08593.t1 |
Gene Sequence |
Protein sequence |