AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09058

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09058.t1 MTR_8g086290 98.870 177 2 0 1 177 1 177 1.11e-130 363
MS.gene09058.t1 MTR_2g105290 71.856 167 47 0 1 167 1 167 4.99e-87 253
MS.gene09058.t1 MTR_4g127140 67.232 177 48 2 1 167 1 177 2.14e-72 216
MS.gene09058.t1 MTR_7g028448 64.596 161 49 2 1 161 1 153 5.47e-65 197
MS.gene09058.t1 MTR_4g036915 64.596 161 49 2 1 161 1 153 5.47e-65 197
MS.gene09058.t1 MTR_1g105910 42.169 166 86 2 8 166 5 167 6.51e-41 138
MS.gene09058.t1 MTR_1g108510 42.529 174 88 3 8 174 5 173 1.28e-40 137
MS.gene09058.t1 MTR_3g030770 42.529 174 88 3 8 174 5 173 2.67e-40 136
MS.gene09058.t1 MTR_3g052920 41.040 173 88 3 8 173 5 170 5.56e-40 135
MS.gene09058.t1 MTR_1g106070 40.964 166 88 2 8 166 5 167 5.99e-40 134
MS.gene09058.t1 MTR_8g043650 41.566 166 87 2 8 166 5 167 1.04e-39 135
MS.gene09058.t1 MTR_2g030740 41.566 166 87 2 8 166 5 167 1.87e-39 134
MS.gene09058.t1 MTR_1g105920 40.964 166 88 2 8 166 5 167 5.39e-39 133
MS.gene09058.t1 MTR_1g012570 40.964 166 88 2 8 166 5 167 6.47e-39 133
MS.gene09058.t1 MTR_2g093190 42.604 169 87 2 8 169 5 170 1.04e-38 132
MS.gene09058.t1 MTR_1g108580 40.230 174 92 3 8 174 5 173 1.21e-37 129
MS.gene09058.t1 MTR_3g080940 38.365 159 94 1 7 161 4 162 5.56e-34 119
MS.gene09058.t1 MTR_5g053390 38.037 163 97 2 8 166 5 167 2.44e-32 116
MS.gene09058.t1 MTR_5g045560 36.585 164 100 2 8 167 5 168 2.47e-31 113
MS.gene09058.t1 MTR_2g085280 36.747 166 95 2 8 166 5 167 3.16e-31 113
MS.gene09058.t1 MTR_2g085250 36.747 166 95 2 8 166 5 167 3.30e-31 113
MS.gene09058.t1 MTR_3g052870 43.200 125 61 2 8 125 5 126 1.08e-30 111
MS.gene09058.t1 MTR_0121s0100 44.882 127 60 2 8 127 5 128 1.38e-30 108
MS.gene09058.t1 MTR_0121s0080 36.464 181 101 3 8 177 5 182 2.41e-30 110
MS.gene09058.t1 MTR_1g075600 35.838 173 97 3 8 173 5 170 2.47e-30 110
MS.gene09058.t1 MTR_1g105905 36.601 153 87 2 21 166 1 150 1.02e-29 108
MS.gene09058.t1 MTR_1g077360 37.576 165 93 2 8 165 5 166 2.33e-29 108
MS.gene09058.t1 MTR_5g055100 35.583 163 101 2 8 166 5 167 1.37e-27 103
MS.gene09058.t1 MTR_3g030780 53.488 86 33 1 8 86 5 90 4.75e-25 94.4
MS.gene09058.t1 MTR_7g062350 36.747 166 93 3 10 166 17 179 1.77e-23 93.2
MS.gene09058.t1 MTR_8g046350 38.806 134 77 4 12 142 2 133 4.94e-23 90.1
MS.gene09058.t1 MTR_1g047550 38.312 154 73 4 12 158 2 140 5.57e-23 90.5
MS.gene09058.t1 MTR_4g131030 39.241 158 81 5 12 157 2 156 1.68e-22 90.1
MS.gene09058.t1 MTR_8g051580 39.806 103 60 1 12 112 2 104 5.67e-22 87.8
MS.gene09058.t1 MTR_1g054265 40.000 130 66 4 12 131 2 129 2.26e-21 85.9
MS.gene09058.t1 MTR_8g079502 37.500 128 72 3 12 131 2 129 5.48e-21 85.1
MS.gene09058.t1 MTR_1g063160 35.915 142 76 4 12 140 2 141 2.78e-20 83.6
MS.gene09058.t1 MTR_4g094632 46.479 71 38 0 12 82 2 72 4.96e-19 79.7
MS.gene09058.t1 MTR_8g033220 35.000 160 87 4 13 160 3 157 8.56e-19 80.5
MS.gene09058.t1 MTR_8g033220 35.000 160 87 4 13 160 3 157 1.10e-18 80.5
MS.gene09058.t1 MTR_3g113030 40.157 127 60 3 12 123 2 127 1.15e-18 80.1
MS.gene09058.t1 MTR_8g087860 36.313 179 87 9 4 177 10 166 1.92e-18 80.1
MS.gene09058.t1 MTR_8g022970 34.911 169 98 5 2 161 5 170 2.33e-18 78.6
MS.gene09058.t1 MTR_3g102570 54.930 71 31 1 12 81 2 72 2.89e-18 80.5
MS.gene09058.t1 MTR_4g094638 41.250 80 47 0 12 91 2 81 3.04e-18 78.2
MS.gene09058.t1 MTR_3g452380 37.097 124 62 4 8 127 13 124 5.53e-18 78.6
MS.gene09058.t1 MTR_2g017865 34.899 149 80 5 2 148 7 140 6.72e-18 79.0
MS.gene09058.t1 MTR_4g102530 34.161 161 95 4 13 163 3 162 6.95e-18 77.8
MS.gene09058.t1 MTR_8g033270 50.000 68 34 0 12 79 2 69 1.61e-17 77.8
MS.gene09058.t1 MTR_1g053070 51.429 70 34 0 12 81 2 71 1.92e-17 77.4
MS.gene09058.t1 MTR_3g067875 51.786 56 27 0 21 76 1 56 2.27e-17 72.8
MS.gene09058.t1 MTR_1g029670 46.875 64 34 0 12 75 2 65 3.91e-17 75.1
MS.gene09058.t1 MTR_5g066180 47.059 68 36 0 12 79 2 69 4.01e-17 76.3
MS.gene09058.t1 MTR_4g084740 50.704 71 34 1 12 81 2 72 4.29e-17 77.4
MS.gene09058.t1 MTR_3g005530 51.471 68 33 0 12 79 2 69 4.68e-17 75.9
MS.gene09058.t1 MTR_3g088615 45.714 70 36 1 12 79 2 71 4.88e-17 75.1
MS.gene09058.t1 MTR_0003s0590 35.294 153 91 3 12 162 2 148 5.31e-17 76.3
MS.gene09058.t1 MTR_3g067870 50.820 61 30 0 19 79 83 143 1.34e-16 73.2
MS.gene09058.t1 MTR_4g093970 32.934 167 98 3 13 168 29 192 1.98e-16 74.3
MS.gene09058.t1 MTR_1g038300 48.649 74 36 1 12 83 2 75 2.38e-16 74.3
MS.gene09058.t1 MTR_4g109830 30.000 170 108 5 12 173 2 168 2.56e-16 73.9
MS.gene09058.t1 MTR_3g109930 35.135 148 81 5 23 161 12 153 3.58e-16 72.4
MS.gene09058.t1 MTR_7g016600 36.364 143 70 6 12 150 2 127 3.59e-16 73.9
MS.gene09058.t1 MTR_6g015975 42.708 96 50 3 12 103 2 96 5.10e-16 73.6
MS.gene09058.t1 MTR_5g021270 50.000 70 33 1 12 79 2 71 8.36e-16 72.8
MS.gene09058.t1 MTR_2g461710 55.556 54 24 0 12 65 2 55 8.45e-16 68.6
MS.gene09058.t1 MTR_5g021270 50.000 70 33 1 12 79 2 71 8.57e-16 72.8
MS.gene09058.t1 MTR_5g032150 50.000 68 34 0 12 79 2 69 9.52e-16 72.4
MS.gene09058.t1 MTR_5g032520 50.000 68 34 0 12 79 2 69 9.88e-16 72.4
MS.gene09058.t1 MTR_4g109810 34.043 141 75 5 12 150 2 126 1.60e-15 72.0
MS.gene09058.t1 MTR_1g108500 63.265 49 18 0 25 73 110 158 1.91e-15 72.8
MS.gene09058.t1 MTR_6g464720 40.594 101 56 3 12 111 2 99 2.63e-15 71.6
MS.gene09058.t1 MTR_7g075870 46.479 71 38 0 13 83 3 73 3.03e-15 70.9
MS.gene09058.t1 MTR_7g075870 55.357 56 25 0 13 68 3 58 3.60e-15 70.5
MS.gene09058.t1 MTR_2g009890 45.588 68 37 0 12 79 2 69 3.73e-15 71.6
MS.gene09058.t1 MTR_5g066960 48.276 58 30 0 12 69 2 59 3.89e-15 66.6
MS.gene09058.t1 MTR_3g084980 55.357 56 25 0 12 67 2 57 6.43e-15 70.5
MS.gene09058.t1 MTR_7g075850 54.386 57 26 0 12 68 2 58 6.66e-15 70.5
MS.gene09058.t1 MTR_5g046870 53.704 54 25 0 12 65 2 55 9.12e-15 67.4
MS.gene09058.t1 MTR_8g097090 53.571 56 26 0 12 67 2 57 9.83e-15 70.1
MS.gene09058.t1 MTR_1g101970 27.500 160 97 4 12 158 2 155 1.16e-14 68.9
MS.gene09058.t1 MTR_5g031000 42.647 68 39 0 12 79 2 69 1.91e-14 68.9
MS.gene09058.t1 MTR_5g031000 42.647 68 39 0 12 79 2 69 2.08e-14 68.9
MS.gene09058.t1 MTR_8g066260 54.717 53 24 0 12 64 2 54 2.43e-14 68.9
MS.gene09058.t1 MTR_1g075570 34.127 126 73 2 21 146 1 116 3.67e-14 67.0
MS.gene09058.t1 MTR_7g016630 44.928 69 37 1 12 79 2 70 6.35e-14 67.8
MS.gene09058.t1 MTR_2g045020 32.558 172 96 7 10 170 20 182 6.51e-14 66.6
MS.gene09058.t1 MTR_5g046790 44.928 69 37 1 12 79 2 70 6.69e-14 67.4
MS.gene09058.t1 MTR_3g067910 44.286 70 32 1 24 86 2 71 7.74e-14 64.7
MS.gene09058.t1 MTR_3g437790 31.159 138 90 2 29 161 30 167 9.21e-14 66.2
MS.gene09058.t1 MTR_4g108720 51.923 52 25 0 12 63 2 53 6.86e-13 65.9
MS.gene09058.t1 MTR_5g041650 28.485 165 82 5 12 166 39 177 1.12e-12 65.5
MS.gene09058.t1 MTR_4g093030 53.704 54 25 0 12 65 2 55 1.21e-12 62.8
MS.gene09058.t1 MTR_1g041615 33.981 103 51 1 26 128 20 105 1.50e-12 62.0
MS.gene09058.t1 MTR_4g036050 26.061 165 114 4 12 174 2 160 2.35e-12 62.8
MS.gene09058.t1 MTR_4g036050 38.356 73 44 1 12 83 2 74 2.58e-12 62.4
MS.gene09058.t1 MTR_1g114730 30.380 158 87 5 12 161 2 144 2.75e-12 63.9
MS.gene09058.t1 MTR_4g036050 38.356 73 44 1 12 83 2 74 2.91e-12 62.8
MS.gene09058.t1 MTR_4g036050 38.356 73 44 1 12 83 2 74 3.00e-12 62.0
MS.gene09058.t1 MTR_6g018920 29.252 147 84 4 12 150 2 136 1.38e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09058.t1 AT5G60440 41.509 159 86 3 8 159 3 161 2.15e-34 123
MS.gene09058.t1 AT2G24840 40.506 158 89 2 10 162 61 218 1.08e-32 117
MS.gene09058.t1 AT1G65360 42.073 164 86 3 8 165 3 163 5.32e-32 115
MS.gene09058.t1 AT1G01530 38.182 165 99 2 6 167 1 165 2.49e-29 108
MS.gene09058.t1 AT4G36590 35.119 168 99 3 12 169 7 174 6.83e-28 105
MS.gene09058.t1 AT2G34440 37.838 148 84 4 12 154 2 146 2.70e-25 96.3
MS.gene09058.t1 AT1G28460 34.731 167 98 4 8 165 4 168 1.58e-21 86.7
MS.gene09058.t1 AT3G66656 46.875 96 50 1 12 107 2 96 2.52e-21 86.3
MS.gene09058.t1 AT5G51870 33.523 176 100 4 13 171 3 178 3.80e-21 86.3
MS.gene09058.t1 AT5G51870 34.932 146 83 2 5 150 18 151 1.56e-20 84.3
MS.gene09058.t1 AT5G51870 34.194 155 95 2 13 160 3 157 2.78e-20 84.3
MS.gene09058.t1 AT5G51870 34.194 155 95 2 13 160 13 167 3.06e-20 84.3
MS.gene09058.t1 AT5G51870 35.507 138 77 2 13 150 3 128 5.82e-20 82.4
MS.gene09058.t1 AT2G42830 37.063 143 69 5 9 147 14 139 7.19e-20 84.0
MS.gene09058.t1 AT2G42830 37.063 143 69 5 9 147 14 139 7.88e-20 83.6
MS.gene09058.t1 AT1G72350 32.026 153 75 3 12 164 43 166 1.77e-19 82.4
MS.gene09058.t1 AT5G10140 36.913 149 75 5 12 159 2 132 1.82e-19 80.9
MS.gene09058.t1 AT1G77950 35.099 151 87 4 12 161 2 142 2.49e-19 82.4
MS.gene09058.t1 AT1G77950 35.099 151 87 4 12 161 2 142 2.49e-19 82.4
MS.gene09058.t1 AT1G77950 35.099 151 87 4 12 161 2 142 2.49e-19 82.4
MS.gene09058.t1 AT1G77950 35.099 151 87 4 12 161 2 142 2.49e-19 82.4
MS.gene09058.t1 AT4G09960 36.129 155 85 5 12 162 3 147 2.69e-19 82.0
MS.gene09058.t1 AT4G09960 36.129 155 85 5 12 162 2 146 2.78e-19 82.0
MS.gene09058.t1 AT4G09960 36.129 155 85 5 12 162 12 156 3.34e-19 82.0
MS.gene09058.t1 AT4G09960 36.842 152 81 6 12 160 2 141 3.76e-19 81.3
MS.gene09058.t1 AT5G10140 36.913 149 75 5 12 159 2 132 3.88e-19 80.5
MS.gene09058.t1 AT5G10140 36.913 149 75 5 12 159 2 132 4.17e-19 80.9
MS.gene09058.t1 AT4G09960 36.129 155 85 5 12 162 28 172 4.60e-19 82.0
MS.gene09058.t1 AT5G10140 36.913 149 75 5 12 159 2 132 6.95e-19 80.1
MS.gene09058.t1 AT4G18960 38.776 147 65 8 6 147 14 140 7.98e-19 81.3
MS.gene09058.t1 AT1G28450 32.738 168 99 5 8 163 4 169 1.15e-18 79.3
MS.gene09058.t1 AT3G54340 57.377 61 26 0 12 72 2 62 1.62e-18 80.1
MS.gene09058.t1 AT1G29962 30.769 169 105 4 8 165 4 171 2.47e-18 78.6
MS.gene09058.t1 AT2G45660 33.540 161 89 4 13 161 3 157 2.48e-18 77.8
MS.gene09058.t1 AT4G09960 41.739 115 55 4 12 124 97 201 2.69e-18 80.9
MS.gene09058.t1 AT3G58780 39.167 120 57 4 9 124 14 121 5.06e-18 79.0
MS.gene09058.t1 AT3G58780 39.167 120 57 4 9 124 20 127 5.42e-18 79.0
MS.gene09058.t1 AT1G77980 50.704 71 34 1 12 81 2 72 7.04e-18 79.7
MS.gene09058.t1 AT3G58780 35.417 144 72 5 9 148 14 140 7.72e-18 79.0
MS.gene09058.t1 AT5G23260 32.051 156 91 3 12 163 2 146 1.01e-17 77.8
MS.gene09058.t1 AT5G23260 49.351 77 37 1 7 81 13 89 1.22e-17 78.2
MS.gene09058.t1 AT5G23260 49.351 77 37 1 7 81 13 89 1.23e-17 78.2
MS.gene09058.t1 AT2G22540 31.325 166 100 3 12 167 2 163 2.18e-17 77.0
MS.gene09058.t1 AT2G22540 31.325 166 100 3 12 167 2 163 2.18e-17 77.0
MS.gene09058.t1 AT1G22130 50.704 71 34 1 12 81 2 72 2.22e-17 78.6
MS.gene09058.t1 AT3G57390 52.941 68 32 0 12 79 2 69 2.58e-17 76.6
MS.gene09058.t1 AT5G13790 52.857 70 33 0 12 81 2 71 2.87e-17 77.4
MS.gene09058.t1 AT5G13790 52.857 70 33 0 12 81 2 71 3.10e-17 77.4
MS.gene09058.t1 AT5G62165 31.613 155 100 2 13 161 3 157 3.48e-17 74.7
MS.gene09058.t1 AT5G62165 31.613 155 100 2 13 161 3 157 3.48e-17 74.7
MS.gene09058.t1 AT5G62165 31.613 155 100 2 13 161 3 157 3.48e-17 74.7
MS.gene09058.t1 AT4G11880 31.613 155 100 2 13 161 3 157 4.19e-17 75.1
MS.gene09058.t1 AT4G11880 31.613 155 100 2 13 161 3 157 4.19e-17 75.1
MS.gene09058.t1 AT2G45660 33.750 160 88 4 13 160 3 156 4.20e-17 75.9
MS.gene09058.t1 AT3G57390 52.941 68 32 0 12 79 2 69 5.50e-17 76.3
MS.gene09058.t1 AT5G23260 51.389 72 33 1 12 81 2 73 6.60e-17 75.9
MS.gene09058.t1 AT5G15800 36.364 143 71 5 12 150 2 128 7.29e-17 75.9
MS.gene09058.t1 AT3G57230 45.588 68 37 0 12 79 2 69 8.06e-17 73.6
MS.gene09058.t1 AT4G37940 44.595 74 41 0 12 85 2 75 8.91e-17 75.1
MS.gene09058.t1 AT5G62165 44.872 78 43 0 13 90 3 80 9.05e-17 72.4
MS.gene09058.t1 AT4G37940 44.595 74 41 0 12 85 2 75 9.65e-17 73.9
MS.gene09058.t1 AT4G37940 44.595 74 41 0 12 85 2 75 9.71e-17 75.1
MS.gene09058.t1 AT4G22950 30.464 151 100 2 13 158 3 153 9.97e-17 73.9
MS.gene09058.t1 AT3G04100 26.415 159 109 2 8 158 10 168 1.03e-16 74.7
MS.gene09058.t1 AT5G51860 45.570 79 43 0 13 91 3 81 1.19e-16 74.3
MS.gene09058.t1 AT4G24540 51.471 68 33 0 12 79 2 69 1.20e-16 74.7
MS.gene09058.t1 AT3G02310 36.364 143 71 5 12 150 2 128 1.26e-16 74.3
MS.gene09058.t1 AT5G15800 36.364 143 71 5 12 150 2 128 1.31e-16 75.5
MS.gene09058.t1 AT5G62165 38.532 109 65 1 13 119 3 111 1.79e-16 72.8
MS.gene09058.t1 AT5G62165 38.532 109 65 1 13 119 3 111 1.79e-16 72.8
MS.gene09058.t1 AT5G62165 38.532 109 65 1 13 119 3 111 1.79e-16 72.8
MS.gene09058.t1 AT5G62165 38.532 109 65 1 13 119 3 111 1.79e-16 72.8
MS.gene09058.t1 AT5G62165 38.532 109 65 1 13 119 3 111 1.79e-16 72.8
MS.gene09058.t1 AT5G51860 45.570 79 43 0 13 91 3 81 1.83e-16 73.9
MS.gene09058.t1 AT5G62165 31.818 154 99 2 13 160 3 156 2.36e-16 73.9
MS.gene09058.t1 AT5G62165 31.818 154 99 2 13 160 3 156 2.36e-16 73.9
MS.gene09058.t1 AT5G62165 31.818 154 99 2 13 160 3 156 2.36e-16 73.9
MS.gene09058.t1 AT2G22540 31.515 165 96 4 12 167 2 158 3.38e-16 73.9
MS.gene09058.t1 AT5G62165 44.872 78 43 0 13 90 3 80 3.58e-16 73.2
MS.gene09058.t1 AT5G62165 44.872 78 43 0 13 90 3 80 3.58e-16 73.2
MS.gene09058.t1 AT4G22950 30.464 151 100 2 13 158 3 153 3.94e-16 73.6
MS.gene09058.t1 AT4G22950 30.464 151 100 2 13 158 3 153 3.94e-16 73.6
MS.gene09058.t1 AT3G58780 38.136 118 54 4 9 124 14 114 4.44e-16 73.6
MS.gene09058.t1 AT3G57230 45.588 68 37 0 12 79 2 69 4.46e-16 73.6
MS.gene09058.t1 AT3G57230 45.588 68 37 0 12 79 2 69 4.46e-16 73.6
MS.gene09058.t1 AT2G45650 40.816 98 36 1 12 109 2 77 5.05e-16 73.6
MS.gene09058.t1 AT4G11880 33.835 133 82 2 13 139 3 135 6.10e-16 72.8
MS.gene09058.t1 AT4G11880 33.835 133 82 2 13 139 3 135 6.10e-16 72.8
MS.gene09058.t1 AT3G02310 36.364 143 71 5 12 150 2 128 1.05e-15 72.8
MS.gene09058.t1 AT3G58780 53.333 60 28 0 9 68 14 73 1.12e-15 73.2
MS.gene09058.t1 AT5G60910 30.409 171 107 6 12 173 2 169 2.08e-15 72.0
MS.gene09058.t1 AT5G65070 44.928 69 37 1 12 79 2 70 2.55e-15 69.7
MS.gene09058.t1 AT1G69120 29.412 170 109 6 12 173 2 168 2.73e-15 71.2
MS.gene09058.t1 AT1G69120 29.412 170 109 6 12 173 2 168 3.18e-15 71.6
MS.gene09058.t1 AT2G03710 28.662 157 103 5 12 160 2 157 3.65e-15 70.1
MS.gene09058.t1 AT3G61120 44.118 68 38 0 12 79 2 69 5.66e-15 70.9
MS.gene09058.t1 AT1G24260 53.571 56 26 0 12 67 2 57 5.77e-15 70.5
MS.gene09058.t1 AT3G30260 44.928 69 37 1 12 79 2 70 6.09e-15 70.9
MS.gene09058.t1 AT1G24260 53.571 56 26 0 12 67 2 57 6.18e-15 70.9
MS.gene09058.t1 AT1G24260 53.571 56 26 0 12 67 2 57 6.30e-15 70.5
MS.gene09058.t1 AT5G65070 44.928 69 37 1 12 79 2 70 6.42e-15 69.7
MS.gene09058.t1 AT2G03710 53.571 56 26 0 12 67 2 57 9.59e-15 70.1
MS.gene09058.t1 AT2G03710 53.571 56 26 0 12 67 2 57 9.70e-15 70.1
MS.gene09058.t1 AT5G65060 44.928 69 37 1 12 79 2 70 9.94e-15 68.9
MS.gene09058.t1 AT5G65060 44.928 69 37 1 12 79 2 70 1.23e-14 68.9
MS.gene09058.t1 AT5G65060 36.036 111 66 3 12 117 2 112 1.33e-14 68.6
MS.gene09058.t1 AT5G20240 50.000 62 31 0 12 73 2 63 1.35e-14 67.8
MS.gene09058.t1 AT5G65050 44.928 69 37 1 12 79 2 70 1.53e-14 68.2
MS.gene09058.t1 AT5G65050 33.784 148 78 5 12 139 2 149 1.63e-14 68.6
MS.gene09058.t1 AT5G20240 33.566 143 86 5 12 148 2 141 1.64e-14 68.9
MS.gene09058.t1 AT2G14210 50.877 57 28 0 12 68 2 58 1.86e-14 69.3
MS.gene09058.t1 AT5G65070 44.928 69 37 1 12 79 2 70 1.96e-14 68.6
MS.gene09058.t1 AT5G65070 44.928 69 37 1 12 79 2 70 2.00e-14 68.9
MS.gene09058.t1 AT1G47760 49.153 59 30 0 12 70 2 60 2.59e-14 67.8
MS.gene09058.t1 AT1G26310 46.377 69 36 1 12 79 2 70 2.75e-14 68.9
MS.gene09058.t1 AT2G14210 50.877 57 28 0 12 68 2 58 2.81e-14 68.6
MS.gene09058.t1 AT5G65050 44.928 69 37 1 12 79 2 70 3.65e-14 67.8
MS.gene09058.t1 AT5G65050 44.928 69 37 1 12 79 2 70 3.75e-14 67.4
MS.gene09058.t1 AT5G65070 49.123 57 29 0 12 68 2 58 6.31e-14 67.8
MS.gene09058.t1 AT1G71692 51.923 52 25 0 13 64 3 54 8.61e-14 67.0
MS.gene09058.t1 AT2G22630 41.892 74 43 0 12 85 2 75 1.02e-13 67.0
MS.gene09058.t1 AT2G22630 41.892 74 43 0 12 85 2 75 1.02e-13 67.0
MS.gene09058.t1 AT5G49420 29.341 167 88 7 8 167 3 146 3.37e-13 66.6
MS.gene09058.t1 AT1G18750 46.429 56 30 0 12 67 2 57 1.10e-12 65.5
MS.gene09058.t1 AT1G18750 46.429 56 30 0 12 67 2 57 1.24e-12 65.5
MS.gene09058.t1 AT1G18750 46.429 56 30 0 12 67 2 57 1.29e-12 65.1
MS.gene09058.t1 AT4G37435 48.214 56 29 0 12 67 2 57 1.55e-12 63.2
MS.gene09058.t1 AT1G69540 39.130 69 41 1 12 79 2 70 2.09e-12 64.3
MS.gene09058.t1 AT1G69540 39.130 69 41 1 12 79 2 70 2.87e-12 64.3
MS.gene09058.t1 AT5G49490 37.209 86 48 2 3 82 34 119 3.63e-12 63.5
MS.gene09058.t1 AT5G65080 48.148 54 28 0 12 65 9 62 6.72e-12 61.6
MS.gene09058.t1 AT2G03060 48.276 58 29 1 12 68 2 59 7.39e-12 63.2
MS.gene09058.t1 AT2G03060 48.276 58 29 1 12 68 2 59 7.39e-12 63.2
MS.gene09058.t1 AT2G03060 48.276 58 29 1 12 68 2 59 7.39e-12 63.2
MS.gene09058.t1 AT5G65080 48.148 54 28 0 12 65 9 62 8.11e-12 61.6
MS.gene09058.t1 AT2G03060 48.276 58 29 1 12 68 2 59 8.94e-12 62.8
MS.gene09058.t1 AT5G38620 28.395 162 88 6 13 167 6 146 1.97e-11 61.6
MS.gene09058.t1 AT1G77080 35.849 106 47 1 12 117 2 86 7.23e-11 58.5
MS.gene09058.t1 AT1G46408 38.356 73 39 2 13 80 5 76 8.26e-11 59.3
MS.gene09058.t1 AT1G77080 35.849 106 47 1 12 117 2 86 9.10e-11 58.2

Find 31 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGACTAAGATTTGGAATA+TGG 0.116779 4.4:-13855721 MS.gene09058:CDS
TGATCAGCTTGAAGAATTTA+TGG 0.178411 4.4:-13855661 MS.gene09058:CDS
TTCCATTGATGTAGCTATTA+AGG 0.197208 4.4:+13855868 None:intergenic
AGATTTGGAATATGGGTAAT+TGG 0.238134 4.4:-13855713 MS.gene09058:CDS
CTCAAATTCCACCATGAATA+TGG 0.248872 4.4:-13856105 None:intergenic
TTGAAAATTTGACTAAGATT+TGG 0.254246 4.4:-13855728 MS.gene09058:CDS
TTGTTTATTGTACTCTTTGT+AGG 0.257540 4.4:+13855803 None:intergenic
TGATGTAGCTATTAAGGATT+TGG 0.289298 4.4:+13855874 None:intergenic
TCTTAGGTTATCCATATTCA+TGG 0.338275 4.4:+13856094 None:intergenic
TTGACTAAGATTTGGAATAT+GGG 0.365430 4.4:-13855720 MS.gene09058:CDS
TTAAGGATTTGGTCAGTGTT+TGG 0.380076 4.4:+13855885 None:intergenic
ACCGAAACAGTGTAGTTTGC+CGG 0.381099 4.4:+13855911 None:intergenic
TGAGAAAGTGACTTGTTTGT+TGG 0.387841 4.4:+13856019 None:intergenic
TTTGATGTTTCAAATTCAAC+AGG 0.390139 4.4:-13855837 MS.gene09058:CDS
CTTCCTCTTCAACTCAGAAA+TGG 0.428773 4.4:+13855635 None:intergenic
GCCGGCAAACTACACTGTTT+CGG 0.438295 4.4:-13855912 MS.gene09058:CDS
ATTTGAAACATCAAACTCAA+TGG 0.455608 4.4:+13855845 None:intergenic
ATCCTTAATAGCTACATCAA+TGG 0.463621 4.4:-13855870 MS.gene09058:CDS
ACAATATGAGGAGGCACTAA+AGG 0.492528 4.4:-13855784 MS.gene09058:CDS
AGAGTACAATAAACAATATG+AGG 0.506442 4.4:-13855796 MS.gene09058:CDS
GGCACTAAAGGTGTTGGAGA+TGG 0.510619 4.4:-13855772 MS.gene09058:CDS
TGAGGAGGCACTAAAGGTGT+TGG 0.525149 4.4:-13855778 MS.gene09058:CDS
GAAGAGGAAGCTACTTGAAA+GGG 0.526324 4.4:-13855622 MS.gene09058:CDS
TTTGGAATATGGGTAATTGG+TGG 0.532497 4.4:-13855710 MS.gene09058:CDS
GGCAGGAGAAAACACGATGA+TGG 0.556314 4.4:+13855932 None:intergenic
TGAAGAGGAAGCTACTTGAA+AGG 0.570414 4.4:-13855623 MS.gene09058:CDS
AGTCCATTTCTGAGTTGAAG+AGG 0.572765 4.4:-13855638 MS.gene09058:CDS
AAACAGTGTAGTTTGCCGGC+AGG 0.581035 4.4:+13855915 None:intergenic
ACTTTCTCAAAGAGAAGACA+AGG 0.611669 4.4:-13856005 MS.gene09058:CDS
CTACAACATAGAAAACATCA+TGG 0.627330 4.4:+13855581 None:intergenic
GTACAATAAACAATATGAGG+AGG 0.656498 4.4:-13855793 MS.gene09058:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAATTTGACTAAGATT+TGG - chr4.4:13855945-13855964 MS.gene09058:CDS 20.0%
! AGAGTACAATAAACAATATG+AGG - chr4.4:13855877-13855896 MS.gene09058:CDS 25.0%
! TTGTTTATTGTACTCTTTGT+AGG + chr4.4:13855873-13855892 None:intergenic 25.0%
! TTTGATGTTTCAAATTCAAC+AGG - chr4.4:13855836-13855855 MS.gene09058:CDS 25.0%
!! ATTTGAAACATCAAACTCAA+TGG + chr4.4:13855831-13855850 None:intergenic 25.0%
!! TTGACTAAGATTTGGAATAT+GGG - chr4.4:13855953-13855972 MS.gene09058:CDS 25.0%
!! TTTGACTAAGATTTGGAATA+TGG - chr4.4:13855952-13855971 MS.gene09058:CDS 25.0%
AACCTAAGAAAGAAAAACAC+AGG - chr4.4:13855593-13855612 MS.gene09058:CDS 30.0%
ACCTAAGAAAGAAAAACACA+GGG - chr4.4:13855594-13855613 MS.gene09058:CDS 30.0%
ATCCTTAATAGCTACATCAA+TGG - chr4.4:13855803-13855822 MS.gene09058:CDS 30.0%
CTACAACATAGAAAACATCA+TGG + chr4.4:13856095-13856114 None:intergenic 30.0%
GTACAATAAACAATATGAGG+AGG - chr4.4:13855880-13855899 MS.gene09058:CDS 30.0%
TGATCAGCTTGAAGAATTTA+TGG - chr4.4:13856012-13856031 MS.gene09058:CDS 30.0%
TGATGTAGCTATTAAGGATT+TGG + chr4.4:13855802-13855821 None:intergenic 30.0%
TTCCATTGATGTAGCTATTA+AGG + chr4.4:13855808-13855827 None:intergenic 30.0%
! AGATTTGGAATATGGGTAAT+TGG - chr4.4:13855960-13855979 MS.gene09058:CDS 30.0%
ACTTTCTCAAAGAGAAGACA+AGG - chr4.4:13855668-13855687 MS.gene09058:CDS 35.0%
! TTAAGGATTTGGTCAGTGTT+TGG + chr4.4:13855791-13855810 None:intergenic 35.0%
! TTTGGAATATGGGTAATTGG+TGG - chr4.4:13855963-13855982 MS.gene09058:CDS 35.0%
!! TGAGAAAGTGACTTGTTTGT+TGG + chr4.4:13855657-13855676 None:intergenic 35.0%
CTTCCTCTTCAACTCAGAAA+TGG + chr4.4:13856041-13856060 None:intergenic 40.0%
GAAGAGGAAGCTACTTGAAA+GGG - chr4.4:13856051-13856070 MS.gene09058:CDS 40.0%
TGAAGAGGAAGCTACTTGAA+AGG - chr4.4:13856050-13856069 MS.gene09058:CDS 40.0%
! AGTCCATTTCTGAGTTGAAG+AGG - chr4.4:13856035-13856054 MS.gene09058:CDS 40.0%
! GCCCTGTGTTTTTCTTTCTT+AGG + chr4.4:13855598-13855617 None:intergenic 40.0%
!! ACAATATGAGGAGGCACTAA+AGG - chr4.4:13855889-13855908 MS.gene09058:CDS 40.0%
!! TGCAAAGTTCACTCGCTTTT+CGG + chr4.4:13855700-13855719 None:intergenic 40.0%
! ACCGAAACAGTGTAGTTTGC+CGG + chr4.4:13855765-13855784 None:intergenic 45.0%
! ATCATCGTGTTTTCTCCTGC+CGG - chr4.4:13855743-13855762 MS.gene09058:CDS 45.0%
GCCGGCAAACTACACTGTTT+CGG - chr4.4:13855761-13855780 MS.gene09058:CDS 50.0%
GGCAGGAGAAAACACGATGA+TGG + chr4.4:13855744-13855763 None:intergenic 50.0%
! AAACAGTGTAGTTTGCCGGC+AGG + chr4.4:13855761-13855780 None:intergenic 50.0%
!! GGCACTAAAGGTGTTGGAGA+TGG - chr4.4:13855901-13855920 MS.gene09058:CDS 50.0%
!! TGAGGAGGCACTAAAGGTGT+TGG - chr4.4:13855895-13855914 MS.gene09058:CDS 50.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 13855581 13856114 13855581 ID=MS.gene09058
chr4.4 mRNA 13855581 13856114 13855581 ID=MS.gene09058.t1;Parent=MS.gene09058
chr4.4 exon 13855581 13856114 13855581 ID=MS.gene09058.t1.exon1;Parent=MS.gene09058.t1
chr4.4 CDS 13855581 13856114 13855581 ID=cds.MS.gene09058.t1;Parent=MS.gene09058.t1
Gene Sequence

>MS.gene09058

ATGAATATGGATAACCTAAGAAAGAAAAACACAGGGCGTAGAAAGATTGAGATCAAAAAGCTTGAAAAAGAAACCAACAAACAAGTCACTTTCTCAAAGAGAAGACAAGGTTTATTCCGAAAAGCGAGTGAACTTTGCACTTTATGTGATGTTCATGCAGCCATCATCGTGTTTTCTCCTGCCGGCAAACTACACTGTTTCGGTGAACCAAACACTGACCAAATCCTTAATAGCTACATCAATGGAACCATTGAGTTTGATGTTTCAAATTCAACAGGAAATTCTTCAACCTACAAAGAGTACAATAAACAATATGAGGAGGCACTAAAGGTGTTGGAGATGGAAAAACAGAAACTTGCTGATGTTGAAAATTTGACTAAGATTTGGAATATGGGTAATTGGTGGAATGAATCTATTGATGAGATGAATAGTGATCAGCTTGAAGAATTTATGGAGTCCATTTCTGAGTTGAAGAGGAAGCTACTTGAAAGGGCTGATGAACATACGAATACCATGATGTTTTCTATGTTGTAG
Protein sequence

>MS.gene09058.t1

MNMDNLRKKNTGRRKIEIKKLEKETNKQVTFSKRRQGLFRKASELCTLCDVHAAIIVFSPAGKLHCFGEPNTDQILNSYINGTIEFDVSNSTGNSSTYKEYNKQYEEALKVLEMEKQKLADVENLTKIWNMGNWWNESIDEMNSDQLEEFMESISELKRKLLERADEHTNTMMFSML