AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09228

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09228.t1 MTR_8g097090 100.000 242 0 0 1 242 1 242 4.04e-180 494
MS.gene09228.t1 MTR_3g084980 84.898 245 33 4 1 242 1 244 2.66e-151 421
MS.gene09228.t1 MTR_6g015975 66.142 254 68 7 1 241 1 249 9.48e-107 308
MS.gene09228.t1 MTR_7g016600 64.542 251 76 5 1 241 1 248 8.34e-102 296
MS.gene09228.t1 MTR_4g109810 57.399 223 90 2 1 221 1 220 5.55e-81 243
MS.gene09228.t1 MTR_8g033270 50.000 252 113 5 1 241 1 250 3.41e-75 228
MS.gene09228.t1 MTR_7g075850 50.394 254 108 7 1 241 1 249 1.47e-74 227
MS.gene09228.t1 MTR_4g109830 60.947 169 65 1 1 169 1 168 3.98e-62 194
MS.gene09228.t1 MTR_8g066260 56.805 169 72 1 1 169 1 168 9.74e-59 186
MS.gene09228.t1 MTR_6g464720 54.438 169 77 0 1 169 1 169 7.45e-56 179
MS.gene09228.t1 MTR_7g016630 44.144 222 105 3 1 222 1 203 9.42e-53 171
MS.gene09228.t1 MTR_5g046790 53.254 169 78 1 1 169 1 168 2.26e-52 169
MS.gene09228.t1 MTR_1g101970 47.929 169 87 1 1 169 1 168 2.21e-48 158
MS.gene09228.t1 MTR_2g017865 48.571 175 88 2 1 175 16 188 9.73e-47 156
MS.gene09228.t1 MTR_8g087860 42.222 225 120 4 1 220 17 236 7.23e-46 153
MS.gene09228.t1 MTR_5g046870 85.185 81 12 0 1 81 1 81 1.08e-45 149
MS.gene09228.t1 MTR_3g452380 48.387 186 92 3 1 185 16 198 1.21e-45 152
MS.gene09228.t1 MTR_3g005530 47.059 187 91 3 1 184 1 182 1.77e-45 152
MS.gene09228.t1 MTR_4g102530 50.000 174 75 4 1 169 1 167 7.15e-45 149
MS.gene09228.t1 MTR_8g033220 47.701 174 86 3 1 172 1 171 2.11e-44 149
MS.gene09228.t1 MTR_8g033220 47.701 174 86 3 1 172 1 171 2.55e-44 149
MS.gene09228.t1 MTR_7g075870 49.704 169 84 1 1 169 1 168 9.57e-44 147
MS.gene09228.t1 MTR_7g075870 49.704 169 83 2 1 169 1 167 5.48e-42 142
MS.gene09228.t1 MTR_4g036050 42.857 175 100 0 1 175 1 175 6.06e-40 137
MS.gene09228.t1 MTR_2g009890 43.503 177 87 3 1 172 1 169 7.08e-39 136
MS.gene09228.t1 MTR_5g031000 36.697 218 125 5 1 213 1 210 6.42e-37 129
MS.gene09228.t1 MTR_5g031000 41.279 172 97 2 1 172 1 168 1.16e-36 129
MS.gene09228.t1 MTR_4g036050 43.038 158 90 0 1 158 1 158 1.66e-36 127
MS.gene09228.t1 MTR_4g036050 44.828 145 80 0 1 145 1 145 1.41e-35 124
MS.gene09228.t1 MTR_4g036050 41.714 175 88 1 1 175 1 161 1.53e-35 125
MS.gene09228.t1 MTR_5g046830 45.098 153 77 2 94 241 21 171 2.03e-35 124
MS.gene09228.t1 MTR_0003s0590 46.629 178 88 5 1 175 1 174 3.18e-35 126
MS.gene09228.t1 MTR_1g053070 45.989 187 78 8 1 175 1 176 2.77e-34 123
MS.gene09228.t1 MTR_1g038300 40.556 180 88 6 1 169 1 172 4.45e-34 122
MS.gene09228.t1 MTR_3g088615 41.447 152 74 3 1 147 1 142 1.18e-33 120
MS.gene09228.t1 MTR_1g029670 37.113 194 101 5 1 187 1 180 2.47e-31 114
MS.gene09228.t1 MTR_3g113030 43.396 159 84 3 1 159 1 153 4.43e-30 112
MS.gene09228.t1 MTR_2g461710 83.051 59 10 0 1 59 1 59 5.14e-30 107
MS.gene09228.t1 MTR_5g032150 40.936 171 99 2 1 171 1 169 6.01e-30 112
MS.gene09228.t1 MTR_5g066180 38.506 174 99 3 1 172 1 168 9.41e-30 111
MS.gene09228.t1 MTR_4g093970 39.655 174 99 3 1 171 27 197 4.15e-29 110
MS.gene09228.t1 MTR_5g032520 41.667 180 94 5 1 176 1 173 6.24e-29 109
MS.gene09228.t1 MTR_5g021270 39.306 173 96 4 1 169 1 168 1.03e-27 106
MS.gene09228.t1 MTR_5g021270 39.306 173 96 4 1 169 1 168 1.14e-27 105
MS.gene09228.t1 MTR_4g084740 57.143 70 30 0 1 70 1 70 1.44e-21 91.7
MS.gene09228.t1 MTR_5g066960 63.333 60 22 0 1 60 1 60 1.55e-21 85.1
MS.gene09228.t1 MTR_3g102570 60.000 70 28 0 1 70 1 70 2.04e-21 91.3
MS.gene09228.t1 MTR_4g093030 63.333 60 22 0 1 60 1 60 9.77e-21 85.9
MS.gene09228.t1 MTR_2g461760 44.860 107 58 1 63 169 1 106 3.83e-19 82.0
MS.gene09228.t1 MTR_2g461760 44.860 107 58 1 63 169 1 106 4.00e-19 82.0
MS.gene09228.t1 MTR_1g041615 75.556 45 11 0 16 60 20 64 1.53e-17 76.6
MS.gene09228.t1 MTR_2g030740 49.275 69 34 1 2 70 9 76 1.25e-15 73.9
MS.gene09228.t1 MTR_3g052920 46.835 79 39 1 2 77 9 87 3.42e-15 72.8
MS.gene09228.t1 MTR_8g051580 35.882 170 88 7 1 162 1 157 3.47e-15 71.6
MS.gene09228.t1 MTR_1g108580 55.357 56 25 0 2 57 9 64 4.31e-15 72.4
MS.gene09228.t1 MTR_1g108510 46.377 69 36 1 2 70 9 76 6.46e-15 72.0
MS.gene09228.t1 MTR_3g030770 35.185 108 66 2 2 109 9 112 6.59e-15 72.0
MS.gene09228.t1 MTR_2g105290 43.902 82 28 2 1 82 11 74 7.35e-15 70.5
MS.gene09228.t1 MTR_8g086290 53.571 56 26 0 2 57 12 67 1.29e-14 70.1
MS.gene09228.t1 MTR_2g093190 44.928 69 37 1 2 70 9 76 1.79e-14 70.5
MS.gene09228.t1 MTR_8g079502 52.632 57 27 0 1 57 1 57 2.16e-14 69.3
MS.gene09228.t1 MTR_3g052870 46.377 69 36 1 2 70 9 76 4.94e-14 69.3
MS.gene09228.t1 MTR_1g012570 57.143 56 24 0 2 57 9 64 5.65e-14 69.3
MS.gene09228.t1 MTR_1g047550 52.632 57 27 0 1 57 1 57 6.20e-14 68.2
MS.gene09228.t1 MTR_8g043650 46.377 69 36 1 2 70 9 76 6.62e-14 69.3
MS.gene09228.t1 MTR_1g075600 46.377 69 36 1 2 70 9 76 6.76e-14 69.3
MS.gene09228.t1 MTR_1g105920 46.377 69 36 1 2 70 9 76 6.89e-14 69.3
MS.gene09228.t1 MTR_1g105910 46.377 69 36 1 2 70 9 76 8.59e-14 68.9
MS.gene09228.t1 MTR_1g054265 50.877 57 28 0 1 57 1 57 1.12e-13 67.4
MS.gene09228.t1 MTR_5g041650 32.597 181 96 6 1 156 38 217 1.15e-13 70.1
MS.gene09228.t1 MTR_5g045560 48.571 70 35 1 1 70 8 76 1.17e-13 68.6
MS.gene09228.t1 MTR_4g094632 47.541 61 32 0 1 61 1 61 1.20e-13 67.0
MS.gene09228.t1 MTR_1g077360 46.377 69 36 1 2 70 9 76 1.99e-13 67.8
MS.gene09228.t1 MTR_0121s0080 38.235 102 57 3 2 101 7 104 2.04e-13 67.8
MS.gene09228.t1 MTR_1g063160 49.123 57 29 0 1 57 1 57 3.00e-13 66.2
MS.gene09228.t1 MTR_2g085280 47.826 69 35 1 2 70 9 76 3.08e-13 67.4
MS.gene09228.t1 MTR_4g131030 49.123 57 29 0 1 57 1 57 3.25e-13 67.0
MS.gene09228.t1 MTR_2g085250 47.826 69 35 1 2 70 9 76 3.43e-13 67.4
MS.gene09228.t1 MTR_0121s0100 50.000 56 28 0 2 57 9 64 4.32e-13 64.7
MS.gene09228.t1 MTR_5g055100 55.357 56 25 0 2 57 9 64 8.14e-13 66.2
MS.gene09228.t1 MTR_5g053390 55.357 56 25 0 2 57 9 64 1.03e-12 65.9
MS.gene09228.t1 MTR_4g108720 30.435 207 112 9 1 194 1 188 1.03e-12 67.0
MS.gene09228.t1 MTR_1g106070 43.478 69 38 1 2 70 9 76 1.81e-12 64.3
MS.gene09228.t1 MTR_4g094638 45.763 59 32 0 1 59 1 59 3.92e-12 63.2
MS.gene09228.t1 MTR_7g028448 66.667 42 14 0 16 57 26 67 4.79e-12 62.8
MS.gene09228.t1 MTR_4g036915 66.667 42 14 0 16 57 26 67 4.79e-12 62.8
MS.gene09228.t1 MTR_3g030780 31.148 122 78 3 2 121 9 126 6.29e-12 61.6
MS.gene09228.t1 MTR_8g046350 45.614 57 31 0 1 57 1 57 2.27e-11 60.8
MS.gene09228.t1 MTR_3g080940 45.614 57 31 0 1 57 8 64 2.48e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09228.t1 AT1G24260 76.829 246 51 5 1 242 1 244 2.48e-124 353
MS.gene09228.t1 AT1G24260 76.518 247 51 5 1 242 1 245 2.86e-124 353
MS.gene09228.t1 AT1G24260 73.279 247 45 6 1 242 1 231 4.72e-114 327
MS.gene09228.t1 AT3G02310 63.492 252 78 6 1 241 1 249 5.61e-101 294
MS.gene09228.t1 AT5G15800 62.500 256 75 5 1 241 1 250 1.32e-99 290
MS.gene09228.t1 AT5G15800 68.750 224 61 3 1 218 1 221 1.02e-97 286
MS.gene09228.t1 AT3G02310 79.290 169 34 1 1 169 1 168 2.75e-90 265
MS.gene09228.t1 AT2G03710 51.538 260 103 8 1 241 1 256 4.18e-75 228
MS.gene09228.t1 AT2G03710 51.341 261 103 8 1 241 1 257 5.08e-75 228
MS.gene09228.t1 AT2G03710 66.474 173 55 2 1 172 1 171 2.17e-74 224
MS.gene09228.t1 AT2G45650 47.244 254 118 8 1 241 1 251 2.11e-64 201
MS.gene09228.t1 AT1G69120 54.023 174 69 2 1 169 1 168 4.07e-59 187
MS.gene09228.t1 AT1G26310 44.828 261 115 8 1 240 1 253 2.69e-58 186
MS.gene09228.t1 AT1G69120 54.023 174 69 2 1 169 1 168 2.77e-58 186
MS.gene09228.t1 AT5G60910 56.977 172 67 2 1 169 1 168 4.49e-58 184
MS.gene09228.t1 AT3G61120 51.020 196 81 5 1 187 1 190 8.70e-55 176
MS.gene09228.t1 AT4G09960 48.128 187 91 4 1 184 2 185 3.51e-50 164
MS.gene09228.t1 AT4G09960 48.128 187 91 4 1 184 1 184 3.52e-50 164
MS.gene09228.t1 AT4G09960 48.128 187 91 4 1 184 11 194 5.78e-50 164
MS.gene09228.t1 AT4G09960 48.128 187 91 4 1 184 27 210 1.78e-49 163
MS.gene09228.t1 AT3G58780 47.090 189 96 3 1 188 16 201 3.73e-48 159
MS.gene09228.t1 AT3G58780 47.090 189 96 3 1 188 22 207 4.01e-48 159
MS.gene09228.t1 AT4G18960 49.153 177 82 3 2 175 18 189 3.57e-47 157
MS.gene09228.t1 AT4G09960 47.120 191 91 5 1 184 96 283 2.46e-46 157
MS.gene09228.t1 AT4G09960 47.594 187 78 5 1 184 1 170 3.31e-45 150
MS.gene09228.t1 AT3G58780 45.503 189 92 3 1 188 16 194 5.00e-45 151
MS.gene09228.t1 AT3G58780 42.254 213 96 3 1 188 16 226 2.38e-44 150
MS.gene09228.t1 AT2G42830 46.154 182 94 3 1 181 16 194 3.28e-44 149
MS.gene09228.t1 AT4G11880 53.750 160 68 2 1 158 1 156 8.10e-44 146
MS.gene09228.t1 AT4G11880 53.750 160 68 2 1 158 1 156 8.10e-44 146
MS.gene09228.t1 AT3G30260 50.641 156 70 3 1 153 1 152 3.30e-43 147
MS.gene09228.t1 AT2G45660 43.814 194 105 3 1 194 1 190 7.58e-43 144
MS.gene09228.t1 AT2G42830 46.196 184 93 4 1 181 16 196 1.19e-42 145
MS.gene09228.t1 AT4G22950 47.191 178 79 3 1 172 1 169 1.37e-42 142
MS.gene09228.t1 AT4G22950 47.222 180 80 3 1 174 1 171 1.46e-42 144
MS.gene09228.t1 AT4G22950 47.222 180 80 3 1 174 1 171 1.46e-42 144
MS.gene09228.t1 AT4G11880 56.000 150 60 2 1 148 1 146 1.53e-42 144
MS.gene09228.t1 AT4G11880 56.000 150 60 2 1 148 1 146 1.53e-42 144
MS.gene09228.t1 AT5G62165 46.552 174 91 2 1 174 1 172 3.92e-42 142
MS.gene09228.t1 AT5G62165 46.552 174 91 2 1 174 1 172 3.92e-42 142
MS.gene09228.t1 AT5G62165 46.552 174 91 2 1 174 1 172 3.92e-42 142
MS.gene09228.t1 AT3G58780 52.000 150 68 3 1 149 16 162 1.87e-41 143
MS.gene09228.t1 AT2G45660 48.101 158 80 2 1 158 1 156 6.34e-41 138
MS.gene09228.t1 AT5G62165 47.468 158 81 2 1 158 1 156 7.31e-40 135
MS.gene09228.t1 AT5G62165 47.468 158 81 2 1 158 1 156 7.31e-40 135
MS.gene09228.t1 AT5G62165 47.468 158 81 2 1 158 1 156 7.31e-40 135
MS.gene09228.t1 AT3G57230 44.186 172 93 2 1 172 1 169 2.58e-39 136
MS.gene09228.t1 AT3G57230 44.186 172 93 2 1 172 1 169 2.58e-39 136
MS.gene09228.t1 AT5G62165 47.297 148 76 2 1 148 1 146 5.21e-38 130
MS.gene09228.t1 AT5G62165 47.297 148 76 2 1 148 1 146 5.21e-38 130
MS.gene09228.t1 AT5G62165 47.297 148 76 2 1 148 1 146 5.21e-38 130
MS.gene09228.t1 AT5G62165 47.297 148 76 2 1 148 1 146 5.21e-38 130
MS.gene09228.t1 AT5G62165 47.297 148 76 2 1 148 1 146 5.21e-38 130
MS.gene09228.t1 AT5G62165 44.828 174 80 3 1 174 1 158 1.79e-37 130
MS.gene09228.t1 AT5G62165 44.828 174 80 3 1 174 1 158 1.79e-37 130
MS.gene09228.t1 AT4G37940 43.787 169 92 2 1 169 1 166 5.51e-37 130
MS.gene09228.t1 AT2G14210 38.462 208 110 4 1 194 1 204 8.97e-37 129
MS.gene09228.t1 AT2G14210 38.942 208 109 4 1 194 1 204 1.10e-36 129
MS.gene09228.t1 AT3G57230 50.355 141 67 2 1 141 1 138 3.21e-36 125
MS.gene09228.t1 AT2G22630 38.863 211 119 5 1 211 1 201 1.12e-35 126
MS.gene09228.t1 AT2G22630 38.863 211 119 5 1 211 1 201 1.12e-35 126
MS.gene09228.t1 AT5G13790 45.029 171 85 3 1 171 1 162 1.50e-35 127
MS.gene09228.t1 AT4G37940 44.379 169 91 2 1 169 1 166 1.67e-35 125
MS.gene09228.t1 AT5G13790 46.512 172 84 3 1 171 1 165 4.33e-35 126
MS.gene09228.t1 AT1G71692 39.698 199 113 3 1 193 1 198 9.22e-35 124
MS.gene09228.t1 AT2G22540 38.384 198 113 4 1 194 1 193 2.35e-34 123
MS.gene09228.t1 AT2G22540 38.384 198 113 4 1 194 1 193 2.35e-34 123
MS.gene09228.t1 AT5G23260 41.765 170 94 2 1 169 1 166 3.05e-34 124
MS.gene09228.t1 AT4G37940 48.936 141 69 2 1 141 1 138 4.64e-34 120
MS.gene09228.t1 AT5G23260 41.765 170 94 2 1 169 17 182 5.22e-34 123
MS.gene09228.t1 AT3G57390 43.503 177 93 3 1 171 1 176 7.80e-34 122
MS.gene09228.t1 AT3G57390 43.258 178 94 3 1 172 1 177 1.27e-33 122
MS.gene09228.t1 AT5G51860 42.169 166 91 3 1 164 1 163 1.84e-33 120
MS.gene09228.t1 AT5G51860 42.169 166 91 3 1 164 1 163 1.94e-33 120
MS.gene09228.t1 AT5G20240 39.683 189 89 6 1 184 1 169 2.25e-33 120
MS.gene09228.t1 AT5G10140 40.828 169 87 2 1 165 1 160 2.40e-33 119
MS.gene09228.t1 AT5G51870 39.904 208 109 8 1 203 1 197 2.44e-33 120
MS.gene09228.t1 AT5G51870 41.341 179 97 4 1 175 11 185 4.42e-33 120
MS.gene09228.t1 AT5G51870 41.341 179 97 4 1 175 1 175 4.54e-33 119
MS.gene09228.t1 AT5G65050 41.765 170 88 4 1 169 1 160 4.55e-33 118
MS.gene09228.t1 AT5G65050 41.765 170 88 4 1 169 1 160 1.16e-32 118
MS.gene09228.t1 AT5G10140 42.953 149 76 1 1 149 1 140 2.53e-32 117
MS.gene09228.t1 AT5G10140 42.953 149 76 1 1 149 1 140 3.44e-32 115
MS.gene09228.t1 AT5G10140 42.953 149 76 1 1 149 1 140 7.97e-32 115
MS.gene09228.t1 AT5G65050 40.588 170 79 4 1 169 1 149 1.71e-31 114
MS.gene09228.t1 AT5G65080 44.025 159 78 3 1 158 8 156 2.89e-31 114
MS.gene09228.t1 AT5G20240 42.857 147 69 3 1 142 1 137 4.21e-31 112
MS.gene09228.t1 AT5G23260 41.176 170 90 3 1 169 17 177 5.13e-31 115
MS.gene09228.t1 AT5G62165 73.611 72 18 1 1 72 1 71 6.25e-31 110
MS.gene09228.t1 AT5G51870 44.295 149 76 4 1 146 1 145 1.15e-30 112
MS.gene09228.t1 AT5G51870 44.295 149 76 4 1 146 24 168 3.39e-30 111
MS.gene09228.t1 AT5G65060 40.000 170 91 4 1 169 1 160 5.15e-30 111
MS.gene09228.t1 AT5G65060 40.000 170 91 4 1 169 1 160 5.33e-30 111
MS.gene09228.t1 AT5G65070 41.420 169 90 1 1 169 1 160 1.14e-29 110
MS.gene09228.t1 AT5G65050 39.655 174 90 5 1 169 1 164 1.78e-29 109
MS.gene09228.t1 AT2G22540 35.354 198 114 4 1 194 1 188 8.66e-29 108
MS.gene09228.t1 AT5G23260 39.412 170 84 3 1 169 1 152 9.89e-29 108
MS.gene09228.t1 AT5G65060 38.824 170 82 4 1 169 1 149 2.13e-28 106
MS.gene09228.t1 AT5G65070 39.267 191 94 3 1 169 1 191 3.58e-28 107
MS.gene09228.t1 AT1G31140 42.308 156 75 4 1 148 1 149 1.02e-27 105
MS.gene09228.t1 AT4G24540 39.791 191 99 6 1 183 1 183 1.05e-27 105
MS.gene09228.t1 AT1G31140 42.949 156 72 5 1 148 1 147 5.22e-27 103
MS.gene09228.t1 AT3G54340 35.542 166 86 4 1 158 1 153 1.54e-25 100
MS.gene09228.t1 AT5G65070 37.056 197 91 4 1 169 1 192 2.27e-25 100
MS.gene09228.t1 AT5G65080 41.026 156 82 4 1 156 8 153 3.81e-25 98.6
MS.gene09228.t1 AT5G65070 38.333 180 89 3 1 158 1 180 1.06e-24 97.8
MS.gene09228.t1 AT5G65070 63.380 71 26 0 1 71 1 71 3.03e-24 94.7
MS.gene09228.t1 AT1G77080 38.824 170 93 3 1 169 1 160 9.61e-24 94.7
MS.gene09228.t1 AT1G77080 40.000 170 91 4 1 169 1 160 9.98e-24 94.4
MS.gene09228.t1 AT1G77080 40.000 170 91 4 1 169 1 160 1.18e-23 94.0
MS.gene09228.t1 AT1G77980 35.185 216 90 10 1 183 1 199 7.54e-22 92.4
MS.gene09228.t1 AT1G77080 34.021 194 96 4 1 169 1 187 1.19e-20 87.4
MS.gene09228.t1 AT1G22130 55.714 70 31 0 1 70 1 70 1.36e-20 89.4
MS.gene09228.t1 AT1G77080 36.095 169 95 2 1 169 1 156 2.82e-20 85.5
MS.gene09228.t1 AT1G69120 41.964 112 54 2 63 169 1 106 8.26e-20 84.3
MS.gene09228.t1 AT5G60910 45.455 110 53 2 63 169 1 106 4.64e-19 82.0
MS.gene09228.t1 AT1G77950 52.857 70 33 0 1 70 1 70 7.31e-18 80.5
MS.gene09228.t1 AT1G77950 52.857 70 33 0 1 70 1 70 7.31e-18 80.5
MS.gene09228.t1 AT1G77950 52.857 70 33 0 1 70 1 70 7.31e-18 80.5
MS.gene09228.t1 AT1G77950 52.857 70 33 0 1 70 1 70 7.31e-18 80.5
MS.gene09228.t1 AT1G77080 35.443 158 89 2 1 158 1 145 1.72e-17 77.0
MS.gene09228.t1 AT4G37435 59.649 57 23 0 1 57 1 57 1.36e-16 75.5
MS.gene09228.t1 AT1G01530 29.545 176 103 4 1 155 6 181 2.88e-15 73.2
MS.gene09228.t1 AT2G03060 45.946 74 39 1 1 73 1 74 6.36e-15 73.6
MS.gene09228.t1 AT2G03060 45.946 74 39 1 1 73 1 74 6.36e-15 73.6
MS.gene09228.t1 AT2G03060 45.946 74 39 1 1 73 1 74 6.36e-15 73.6
MS.gene09228.t1 AT2G03060 45.946 74 39 1 1 73 1 74 7.49e-15 73.6
MS.gene09228.t1 AT1G65360 35.088 114 69 3 1 111 6 117 1.20e-14 71.2
MS.gene09228.t1 AT1G18750 46.269 67 36 0 1 67 1 67 1.77e-14 72.4
MS.gene09228.t1 AT1G18750 46.269 67 36 0 1 67 1 67 2.15e-14 72.0
MS.gene09228.t1 AT1G18750 47.692 65 34 0 1 65 1 65 2.68e-14 72.0
MS.gene09228.t1 AT4G36590 44.737 76 41 1 2 77 7 81 1.21e-13 68.6
MS.gene09228.t1 AT3G04100 34.906 106 68 1 2 107 14 118 1.29e-13 67.8
MS.gene09228.t1 AT1G72350 49.206 63 32 0 2 64 43 105 2.42e-13 67.4
MS.gene09228.t1 AT3G66656 47.368 57 30 0 1 57 1 57 1.85e-12 64.3
MS.gene09228.t1 AT2G34440 29.897 194 102 8 1 188 1 166 2.18e-12 63.9
MS.gene09228.t1 AT5G60440 39.773 88 50 2 2 87 7 93 2.28e-12 65.9
MS.gene09228.t1 AT2G24840 44.286 70 38 1 1 70 62 130 5.46e-12 64.3
MS.gene09228.t1 AT1G69540 27.848 158 90 3 1 158 1 134 6.32e-12 64.7
MS.gene09228.t1 AT1G69540 27.848 158 90 3 1 158 1 134 6.79e-12 64.7
MS.gene09228.t1 AT4G18960 31.967 122 76 2 54 172 55 172 1.21e-11 62.0
MS.gene09228.t1 AT4G18960 31.746 126 79 2 54 176 55 176 1.73e-11 62.4
MS.gene09228.t1 AT4G18960 31.746 126 79 2 54 176 55 176 1.73e-11 62.4
MS.gene09228.t1 AT1G47760 51.020 49 24 0 1 49 1 49 2.13e-11 61.2
MS.gene09228.t1 AT1G29962 50.000 60 30 0 2 61 8 67 7.25e-11 60.1

Find 60 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGCACCATAGTTGCATTTC+TGG 0.164988 4.1:-14938317 None:intergenic
TGTGAGCCAACTTTACAAAT+TGG 0.284934 4.1:+14941639 MS.gene09228:CDS
TGGCCTTGATAGGAACCTTA+TGG 0.343083 4.1:+14939800 MS.gene09228:intron
CTTCAACACATGCATTCATT+TGG 0.343102 4.1:-14941554 None:intergenic
ACAGCTGGTCCAGCATGAAT+TGG 0.364414 4.1:-14941230 None:intergenic
ATATGCTAAGTGAGGCTAAC+AGG 0.379033 4.1:+14941367 MS.gene09228:CDS
GAATGCATGTGTTGAAGAAA+TGG 0.393724 4.1:+14941560 MS.gene09228:CDS
TGCAGCTATCAGCCGGATCC+AGG 0.395569 4.1:+14942344 MS.gene09228:intron
GCTTACCCAATTTGTAAAGT+TGG 0.401741 4.1:-14941645 None:intergenic
TGTGGATCTTATCTGCTTCA+AGG 0.407133 4.1:-14939886 None:intergenic
GTGAGCCAACTTTACAAATT+GGG 0.418802 4.1:+14941640 MS.gene09228:CDS
TGATGGTCTTTATCAACAAT+TGG 0.424945 4.1:+14941614 MS.gene09228:CDS
ATAGGAGTTAAGCAGTCAAC+AGG 0.444832 4.1:+14939653 MS.gene09228:intron
CTTATCATCTTCTCCAATAG+AGG 0.448617 4.1:+14936060 MS.gene09228:CDS
CCCATGTAATTACTCATGCT+TGG 0.457909 4.1:-14942386 None:intergenic
GGCCTTGATAGGAACCTTAT+GGG 0.459553 4.1:+14939801 MS.gene09228:intron
AGGTACCAGAAATGCAACTA+TGG 0.459586 4.1:+14938312 MS.gene09228:CDS
CTAACAGGTCTCTCAGACAA+AGG 0.463260 4.1:+14941382 MS.gene09228:CDS
AACCTTATGGGAGAAGATCT+TGG 0.476304 4.1:+14939813 MS.gene09228:CDS
AAGAGCTCGAGTCGCTTGAA+AGG 0.484895 4.1:+14939850 MS.gene09228:CDS
CAGCTGGTCCAGCATGAATT+GGG 0.487202 4.1:-14941229 None:intergenic
GGCCAAGATCTTCTCCCATA+AGG 0.490557 4.1:-14939815 None:intergenic
CCATCACCCTGAGTTTGACT+TGG 0.495536 4.1:-14941597 None:intergenic
GGATCCAGGGTCAGTCTGTA+CGG 0.504556 4.1:+14942358 MS.gene09228:CDS
TTTAAGTTGCAGCTATCAGC+CGG 0.506629 4.1:+14942337 MS.gene09228:intron
TGTGTCTGCACGAGAAGCCT+TGG 0.516756 4.1:+14938350 MS.gene09228:CDS
CCAGGGTCAGTCTGTACGGC+AGG 0.524716 4.1:+14942362 MS.gene09228:CDS
CGTGCAGACACATTAGTCTC+AGG 0.527777 4.1:-14938339 None:intergenic
TTTACAGACCCAATTCATGC+TGG 0.530409 4.1:+14941221 MS.gene09228:intron
ACCAAGCATGAGTAATTACA+TGG 0.537203 4.1:+14942385 MS.gene09228:CDS
AATGCATGTGTTGAAGAAAT+GGG 0.539143 4.1:+14941561 MS.gene09228:CDS
TTTGTTATTTAGCAGTTGGA+AGG 0.539499 4.1:+14941513 MS.gene09228:intron
CGAGCTCTTTGCTGCTCAGA+GGG 0.541646 4.1:-14939836 None:intergenic
TCGGCATCCAAGTCAAACTC+AGG 0.544754 4.1:+14941590 MS.gene09228:CDS
TGCGTTGAAGATCAGACAGC+TGG 0.550159 4.1:-14941245 None:intergenic
TTGTTATTTAGCAGTTGGAA+GGG 0.552307 4.1:+14941514 MS.gene09228:intron
TAACAGGTCTCTCAGACAAA+GGG 0.562062 4.1:+14941383 MS.gene09228:CDS
GTACAGACTGACCCTGGATC+CGG 0.563619 4.1:-14942356 None:intergenic
TCGAGCTCTTTGCTGCTCAG+AGG 0.567595 4.1:-14939837 None:intergenic
ACCGTTCCTTCGTTTAGCGA+AGG 0.581124 4.1:-14935986 None:intergenic
TGAGTAATTACATGGGAGGA+TGG 0.586709 4.1:+14942393 MS.gene09228:CDS
CCAAGTCAAACTCAGGGTGA+TGG 0.590463 4.1:+14941597 MS.gene09228:CDS
GCAGCTATCAGCCGGATCCA+GGG 0.601563 4.1:+14942345 MS.gene09228:intron
GAAATTGATGAGTACCCTTG+TGG 0.603275 4.1:-14939904 None:intergenic
CCTGCCGTACAGACTGACCC+TGG 0.607784 4.1:-14942362 None:intergenic
ACAGGAATATTTGAAGCTGA+AGG 0.614815 4.1:+14939671 MS.gene09228:CDS
GCTGTCTGATCTTCAACGCA+AGG 0.624674 4.1:+14941248 MS.gene09228:CDS
GCATGCTGAAAACGCTAGAG+AGG 0.625770 4.1:+14938292 MS.gene09228:intron
TGTGTTGAAGAAATGGGCTA+TGG 0.635413 4.1:+14941567 MS.gene09228:CDS
CGGCATCCAAGTCAAACTCA+GGG 0.644538 4.1:+14941591 MS.gene09228:CDS
AGCATGAGTAATTACATGGG+AGG 0.654679 4.1:+14942389 MS.gene09228:CDS
ACCTTCGCTAAACGAAGGAA+CGG 0.658430 4.1:+14935985 MS.gene09228:CDS
GTAGGAACATATGCTAAGTG+AGG 0.659473 4.1:+14941359 MS.gene09228:intron
TTGAAGAAATGGGCTATGGT+CGG 0.681367 4.1:+14941571 MS.gene09228:CDS
AAGTTACCTTCGCTAAACGA+AGG 0.697050 4.1:+14935980 MS.gene09228:CDS
TGAAGCAGATAAGATCCACA+AGG 0.704252 4.1:+14939889 MS.gene09228:CDS
GGATCTTATCTGCTTCAAGG+AGG 0.704987 4.1:-14939883 None:intergenic
CCAAGCATGAGTAATTACAT+GGG 0.716770 4.1:+14942386 MS.gene09228:CDS
GAAGCAGATAAGATCCACAA+GGG 0.741834 4.1:+14939890 MS.gene09228:CDS
AAGCATTACAACGATCCCAG+CGG 0.752193 4.1:+14939703 MS.gene09228:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATATACTAAGAATA+TGG + chr4.1:14937655-14937674 MS.gene09228:intron 10.0%
!! CTTAACAATATATTATAATT+TGG - chr4.1:14942048-14942067 None:intergenic 10.0%
!!! ATAAGGAATTTTTTAATTTT+TGG + chr4.1:14937571-14937590 MS.gene09228:intron 10.0%
!!! TTTGTTTTCATTAATAAAAT+AGG + chr4.1:14938825-14938844 MS.gene09228:intron 10.0%
!! AAAATTGAAAAAGTTAAAGT+TGG - chr4.1:14936761-14936780 None:intergenic 15.0%
!! AAATTTAATTCTATGATGTT+TGG + chr4.1:14937791-14937810 MS.gene09228:intron 15.0%
!! ACAATATTTAAATGCAAAAA+AGG + chr4.1:14938759-14938778 MS.gene09228:intron 15.0%
!! AGTTATGATTTAAATTTCAT+TGG + chr4.1:14941911-14941930 MS.gene09228:intron 15.0%
!! AGTTGTAATTTATAATATGA+TGG - chr4.1:14938706-14938725 None:intergenic 15.0%
!! GTTGATTATTAATGATTTAT+GGG + chr4.1:14937351-14937370 MS.gene09228:intron 15.0%
!! TAATACATATGAAAAGATAA+AGG - chr4.1:14938916-14938935 None:intergenic 15.0%
!! TTTAATCTGTAATAATGATA+AGG + chr4.1:14941011-14941030 MS.gene09228:intron 15.0%
!!! AAAAAGCATCAAATTAATTA+AGG - chr4.1:14938136-14938155 None:intergenic 15.0%
!!! AAGTTTTTGTGTATTAAAAT+GGG + chr4.1:14941959-14941978 MS.gene09228:intron 15.0%
!!! ATTTTTTAAAGTTTTCGTTT+TGG - chr4.1:14938957-14938976 None:intergenic 15.0%
!!! GGTTTTTATTAAAGAAAATT+GGG + chr4.1:14941986-14942005 MS.gene09228:intron 15.0%
!!! GTTTTTATTAAAGAAAATTG+GGG + chr4.1:14941987-14942006 MS.gene09228:intron 15.0%
!!! TGTTGATTATTAATGATTTA+TGG + chr4.1:14937350-14937369 MS.gene09228:intron 15.0%
!!! TTATATTATTTAGTTTTGAG+AGG + chr4.1:14937621-14937640 MS.gene09228:intron 15.0%
!! ACACAATAATGAAATTTGAT+TGG - chr4.1:14942115-14942134 None:intergenic 20.0%
!! ATTACAGATTAAACTAATGA+AGG - chr4.1:14941004-14941023 None:intergenic 20.0%
!! CTGAATAAATAGATATTTGT+AGG + chr4.1:14940449-14940468 MS.gene09228:intron 20.0%
!! GAAAAATATTAGTATGTTAG+TGG - chr4.1:14941093-14941112 None:intergenic 20.0%
!! GTAAAAAACAATCATACAAT+CGG + chr4.1:14942203-14942222 MS.gene09228:intron 20.0%
!!! ACATAAAAGATAATGGAATT+TGG - chr4.1:14936888-14936907 None:intergenic 20.0%
!!! ACTTAATTATGTTTTAAGAG+AGG + chr4.1:14938189-14938208 MS.gene09228:intron 20.0%
!!! ATATATATATTCCCCTTTTT+TGG + chr4.1:14936818-14936837 MS.gene09228:intron 20.0%
!!! ATATTTTCAGCAATGTTTTA+GGG - chr4.1:14937530-14937549 None:intergenic 20.0%
!!! CAAAAACTTGTCTATTTTTT+TGG - chr4.1:14941948-14941967 None:intergenic 20.0%
!!! CAAGTTTTTGTGTATTAAAA+TGG + chr4.1:14941958-14941977 MS.gene09228:intron 20.0%
!!! CTTAATTATGTTTTAAGAGA+GGG + chr4.1:14938190-14938209 MS.gene09228:intron 20.0%
!!! GCTTTTTTGACATATTAATT+TGG + chr4.1:14938149-14938168 MS.gene09228:intron 20.0%
!!! GGGTTTTTATTAAAGAAAAT+TGG + chr4.1:14941985-14942004 MS.gene09228:intron 20.0%
!!! GTCTATTTTTTTGGTATAAT+TGG - chr4.1:14941939-14941958 None:intergenic 20.0%
!!! GTTTTTTTAGTCAAGATAAA+AGG - chr4.1:14938432-14938451 None:intergenic 20.0%
!!! TAAAAAGAAAGAGAGATTTT+AGG - chr4.1:14936142-14936161 None:intergenic 20.0%
!!! TTTATTTAATAGAGTATCAG+AGG + chr4.1:14940142-14940161 MS.gene09228:intron 20.0%
!!! TTTTTAATTTCCTAACCTTT+TGG - chr4.1:14940302-14940321 None:intergenic 20.0%
! AAAACATTTATTGACAGAAG+AGG - chr4.1:14937083-14937102 None:intergenic 25.0%
! AAAAGGAATGATAAAAGGAA+AGG + chr4.1:14939076-14939095 MS.gene09228:intron 25.0%
! AAAGGAATGATAAAAGGAAA+GGG + chr4.1:14939077-14939096 MS.gene09228:intron 25.0%
! AACAATGCATATGAAGAAAT+AGG + chr4.1:14940356-14940375 MS.gene09228:intron 25.0%
! AAGGACAAAAAAAGAATAAG+AGG - chr4.1:14938117-14938136 None:intergenic 25.0%
! AATCTGTAATAATGATAAGG+AGG + chr4.1:14941014-14941033 MS.gene09228:intron 25.0%
! AATTATGATACCAAAAGGTT+AGG + chr4.1:14940289-14940308 MS.gene09228:intron 25.0%
! AGAAAAAGAGAATGACAAAA+AGG - chr4.1:14939222-14939241 None:intergenic 25.0%
! ATAATATGATGGTAGACTAT+AGG - chr4.1:14938695-14938714 None:intergenic 25.0%
! ATGTCAGTCATATATATTGT+TGG - chr4.1:14941058-14941077 None:intergenic 25.0%
! ATTAGAGAAATAAGCACATA+AGG - chr4.1:14939612-14939631 None:intergenic 25.0%
! ATTTGTGTTTCACCAAAAAA+GGG - chr4.1:14936833-14936852 None:intergenic 25.0%
! CCTACATAAGTAACATTAAT+TGG - chr4.1:14941344-14941363 None:intergenic 25.0%
! GAAAGAAAAGGAATGATAAA+AGG + chr4.1:14939071-14939090 MS.gene09228:intron 25.0%
! GAACATGATGAATTATCTAT+TGG - chr4.1:14938628-14938647 None:intergenic 25.0%
! GAGTGGTATGAAAAAAAAAA+GGG - chr4.1:14939157-14939176 None:intergenic 25.0%
! TAAAAAAAAAGTCCATGACT+TGG + chr4.1:14937966-14937985 MS.gene09228:intron 25.0%
! TAAGATTTAGACCATTTATG+AGG - chr4.1:14937229-14937248 None:intergenic 25.0%
! TAATAATGATAAGGAGGTTA+AGG + chr4.1:14941020-14941039 MS.gene09228:intron 25.0%
! TAATTATGTGCATTCTTCAT+TGG + chr4.1:14941150-14941169 MS.gene09228:intron 25.0%
! TATTTGTGTTTCACCAAAAA+AGG - chr4.1:14936834-14936853 None:intergenic 25.0%
! TCATGAATTATGATACCAAA+AGG + chr4.1:14940284-14940303 MS.gene09228:intron 25.0%
! TCTTTGGACATAAAAGATAA+TGG - chr4.1:14936895-14936914 None:intergenic 25.0%
! TGAAAAAAGCAAAAATCGAA+AGG - chr4.1:14936185-14936204 None:intergenic 25.0%
! TGAAACAATGAATTGAAAGA+AGG - chr4.1:14936971-14936990 None:intergenic 25.0%
! TGAGTGGTATGAAAAAAAAA+AGG - chr4.1:14939158-14939177 None:intergenic 25.0%
! TTAGCTAAAACTCTCAAAAT+GGG - chr4.1:14940014-14940033 None:intergenic 25.0%
! TTGGAATTTCATATAGCAAA+TGG - chr4.1:14939945-14939964 None:intergenic 25.0%
!! AAATTTTGCAAGCAACAAAT+TGG - chr4.1:14938038-14938057 None:intergenic 25.0%
!! AATTTTGCAAGCAACAAATT+GGG - chr4.1:14938037-14938056 None:intergenic 25.0%
!! ATAGTCACAAAAATTGCTTT+TGG - chr4.1:14936584-14936603 None:intergenic 25.0%
!! ATTATCTATTGGAGTTTTCA+TGG - chr4.1:14938617-14938636 None:intergenic 25.0%
!! ATTTGTTGCTTGCAAAATTT+AGG + chr4.1:14938038-14938057 MS.gene09228:intron 25.0%
!! CAAAAAATAAACGTGTTGAT+TGG + chr4.1:14939529-14939548 MS.gene09228:intron 25.0%
!! CCAATTAATGTTACTTATGT+AGG + chr4.1:14941341-14941360 MS.gene09228:intron 25.0%
!! GATATTTTCAGCAATGTTTT+AGG - chr4.1:14937531-14937550 None:intergenic 25.0%
!! TAAAAATTGATTCCAAGTCA+TGG - chr4.1:14937981-14938000 None:intergenic 25.0%
!! TAATCAACACATATTTTACC+TGG - chr4.1:14937339-14937358 None:intergenic 25.0%
!! TTATTTCCTTTTTCTTCTAG+TGG + chr4.1:14940498-14940517 MS.gene09228:intron 25.0%
!! TTGTGTATTAAAATGGGTTT+GGG + chr4.1:14941965-14941984 MS.gene09228:intron 25.0%
!! TTTGCTATATGAAATTCCAA+AGG + chr4.1:14939945-14939964 MS.gene09228:intron 25.0%
!! TTTGTGTATTAAAATGGGTT+TGG + chr4.1:14941964-14941983 MS.gene09228:intron 25.0%
!! TTTTAGGCATTTGATATCTT+AGG + chr4.1:14941760-14941779 MS.gene09228:intron 25.0%
!!! ACAAAAATTGCTTTTGGAAA+AGG - chr4.1:14936578-14936597 None:intergenic 25.0%
!!! ACATGTACCAGATTTTTTTT+TGG - chr4.1:14937178-14937197 None:intergenic 25.0%
!!! CTTGTTTTCATATTTTCCTT+TGG + chr4.1:14937118-14937137 MS.gene09228:intron 25.0%
!!! TAGATGATGCTCTTTTAATT+GGG + chr4.1:14940628-14940647 MS.gene09228:intron 25.0%
!!! TATGATCCTTTTTTTAGATC+TGG + chr4.1:14937148-14937167 MS.gene09228:intron 25.0%
!!! TGACATATTAATTTGGTGTT+AGG + chr4.1:14938156-14938175 MS.gene09228:intron 25.0%
!!! TGTTTCATGATAGTGATTTT+TGG + chr4.1:14936984-14937003 MS.gene09228:intron 25.0%
!!! TGTTTTTGTGGAGATATTTT+AGG - chr4.1:14942156-14942175 None:intergenic 25.0%
!!! TTTAGGATTATGTTTTCCTT+TGG - chr4.1:14939964-14939983 None:intergenic 25.0%
!!! TTTTTTTCTTTCCCTCTTTT+AGG + chr4.1:14936483-14936502 MS.gene09228:intron 25.0%
AAAGTTCTTCGAAAACAGAT+TGG + chr4.1:14940896-14940915 MS.gene09228:intron 30.0%
AAATTGTCCAAAACGTAACA+CGG - chr4.1:14938520-14938539 None:intergenic 30.0%
AAGTTCTTCGAAAACAGATT+GGG + chr4.1:14940897-14940916 MS.gene09228:intron 30.0%
AATATCTCCACAAAAACATG+TGG + chr4.1:14942158-14942177 MS.gene09228:intron 30.0%
AATGCATGTGTTGAAGAAAT+GGG + chr4.1:14941561-14941580 MS.gene09228:CDS 30.0%
AATTTCAAATAGCCACAGAA+TGG + chr4.1:14941866-14941885 MS.gene09228:intron 30.0%
ACAAATACCCTTGAATTTCA+TGG + chr4.1:14936847-14936866 MS.gene09228:intron 30.0%
AGATGTTATATGAGTGGTAT+GGG + chr4.1:14939125-14939144 MS.gene09228:intron 30.0%
AGTTTCTCAATTGTAAGCTA+GGG + chr4.1:14940790-14940809 MS.gene09228:intron 30.0%
ATACACGCACAAAAAAATAG+AGG - chr4.1:14939558-14939577 None:intergenic 30.0%
ATATCATCATACAGTCGAAA+GGG - chr4.1:14941294-14941313 None:intergenic 30.0%
ATATGACAATATCAGTTGCT+TGG - chr4.1:14941473-14941492 None:intergenic 30.0%
CAAATACCCTTGAATTTCAT+GGG + chr4.1:14936848-14936867 MS.gene09228:intron 30.0%
CAAATGGCAATGTCAAAATT+TGG - chr4.1:14939929-14939948 None:intergenic 30.0%
CCACAGTTAAAAACAGTATT+AGG - chr4.1:14939783-14939802 None:intergenic 30.0%
CGAAAATATGGTAATTTCAG+AGG - chr4.1:14936520-14936539 None:intergenic 30.0%
CTAGCTATTAACACTGAAAA+TGG - chr4.1:14936656-14936675 None:intergenic 30.0%
CTTAGCTAAAACTCTCAAAA+TGG - chr4.1:14940015-14940034 None:intergenic 30.0%
GAAAAAGGAAATAAACCGAT+TGG - chr4.1:14940492-14940511 None:intergenic 30.0%
GAGGCAATAACAAATTATCA+AGG - chr4.1:14938098-14938117 None:intergenic 30.0%
TAAAGCATGGATAAACCAAT+CGG + chr4.1:14940474-14940493 MS.gene09228:intron 30.0%
TCAGTCATATATATTGTTGG+TGG - chr4.1:14941055-14941074 None:intergenic 30.0%
TCTATATGATCAAGAGATTG+AGG + chr4.1:14937469-14937488 MS.gene09228:intron 30.0%
TGATGGTCTTTATCAACAAT+TGG + chr4.1:14941614-14941633 MS.gene09228:CDS 30.0%
TGCTTAAAAACCAATCAACA+AGG - chr4.1:14938071-14938090 None:intergenic 30.0%
TGGTTGTCCAAAAAAAAATC+TGG + chr4.1:14937168-14937187 MS.gene09228:intron 30.0%
TTAAATGTGGGGATAATGAT+TGG - chr4.1:14939990-14940009 None:intergenic 30.0%
TTAGCTTAACATGATTGATG+AGG - chr4.1:14941426-14941445 None:intergenic 30.0%
TTGCTGATGTTTATATACCT+TGG + chr4.1:14940813-14940832 MS.gene09228:intron 30.0%
TTTATGTCCAAAGAGCAATA+TGG + chr4.1:14936901-14936920 MS.gene09228:intron 30.0%
TTTGTGTTTCACCAAAAAAG+GGG - chr4.1:14936832-14936851 None:intergenic 30.0%
! ATATTTGTAGGTCTAAAGCA+TGG + chr4.1:14940461-14940480 MS.gene09228:intron 30.0%
! ATCAATTTTGAATCATCCCA+AGG - chr4.1:14937760-14937779 None:intergenic 30.0%
! CAAGGGTATATAGGAATAAA+TGG - chr4.1:14939369-14939388 None:intergenic 30.0%
! CAATTTTTGTGACTATAGTC+AGG + chr4.1:14936588-14936607 MS.gene09228:intron 30.0%
! GCAGTAATACATTTTTGTCA+AGG + chr4.1:14937683-14937702 MS.gene09228:intron 30.0%
! GTAGATGATGCTCTTTTAAT+TGG + chr4.1:14940627-14940646 MS.gene09228:intron 30.0%
! TCATGATGTGCATTTCTTTT+AGG + chr4.1:14941744-14941763 MS.gene09228:intron 30.0%
! TTTTGTCATTAGTGACTCTT+TGG - chr4.1:14940946-14940965 None:intergenic 30.0%
!! ACTCTTTGTTATTTAGCAGT+TGG + chr4.1:14941509-14941528 MS.gene09228:intron 30.0%
!! AGATGATGCTCTTTTAATTG+GGG + chr4.1:14940629-14940648 MS.gene09228:intron 30.0%
!! CATTATTGTGTCACTTTCAT+AGG + chr4.1:14942124-14942143 MS.gene09228:intron 30.0%
!! TTAATTTGGTGTTAGGCATA+AGG + chr4.1:14938163-14938182 MS.gene09228:intron 30.0%
!! TTGTTATTTAGCAGTTGGAA+GGG + chr4.1:14941514-14941533 MS.gene09228:intron 30.0%
!! TTTGTTATTTAGCAGTTGGA+AGG + chr4.1:14941513-14941532 MS.gene09228:intron 30.0%
!!! CCTAATACTGTTTTTAACTG+TGG + chr4.1:14939780-14939799 MS.gene09228:intron 30.0%
!!! GACTTTTTTTTTAGTGATCC+AGG - chr4.1:14937959-14937978 None:intergenic 30.0%
!!! GTTTTAGGGCTATAATCAAA+AGG - chr4.1:14937516-14937535 None:intergenic 30.0%
!!! TAATAGCTAGTTTGCTTTTC+TGG + chr4.1:14936666-14936685 MS.gene09228:intron 30.0%
AAAAGGCAAGAGATATCGTT+TGG - chr4.1:14940549-14940568 None:intergenic 35.0%
AAAGTGACACTCCTCATAAA+TGG + chr4.1:14937215-14937234 MS.gene09228:intron 35.0%
AATTTCATGGGACTTTGTCT+TGG + chr4.1:14936860-14936879 MS.gene09228:intron 35.0%
ACAAAGTCCCATGAAATTCA+AGG - chr4.1:14936858-14936877 None:intergenic 35.0%
ACCAAGCATGAGTAATTACA+TGG + chr4.1:14942385-14942404 MS.gene09228:CDS 35.0%
AGAAAAACTGTGGGTAATGA+AGG + chr4.1:14940662-14940681 MS.gene09228:intron 35.0%
AGAGATTAATCATTACCGCT+GGG - chr4.1:14939721-14939740 None:intergenic 35.0%
ATATGAAGAAATAGGTGCAG+AGG + chr4.1:14940364-14940383 MS.gene09228:intron 35.0%
ATTCATGTTAGATCTGCAAC+TGG + chr4.1:14936362-14936381 MS.gene09228:intron 35.0%
CAAAGAGAGCAAAAACCATT+GGG - chr4.1:14937269-14937288 None:intergenic 35.0%
CAAAGTCCCATGAAATTCAA+GGG - chr4.1:14936857-14936876 None:intergenic 35.0%
CAACAAATTGGGACAACTTA+AGG - chr4.1:14938026-14938045 None:intergenic 35.0%
CACATGAGATGATATATGAG+TGG - chr4.1:14939174-14939193 None:intergenic 35.0%
CACATGAGATGTTATATGAG+TGG + chr4.1:14939119-14939138 MS.gene09228:intron 35.0%
CACTCATATAACATCTCATG+TGG - chr4.1:14939121-14939140 None:intergenic 35.0%
CAGTTTCTCAATTGTAAGCT+AGG + chr4.1:14940789-14940808 MS.gene09228:intron 35.0%
CCAAGCATGAGTAATTACAT+GGG + chr4.1:14942386-14942405 MS.gene09228:CDS 35.0%
CCATGAAAGATATGTTACCA+AGG - chr4.1:14938370-14938389 None:intergenic 35.0%
CTGAGTTTAGACCTAAAAGA+GGG - chr4.1:14936497-14936516 None:intergenic 35.0%
CTGATGTTTATATACCTTGG+AGG + chr4.1:14940816-14940835 MS.gene09228:intron 35.0%
CTTATCATCTTCTCCAATAG+AGG + chr4.1:14936060-14936079 MS.gene09228:CDS 35.0%
CTTCAACACATGCATTCATT+TGG - chr4.1:14941557-14941576 None:intergenic 35.0%
GAATGCATGTGTTGAAGAAA+TGG + chr4.1:14941560-14941579 MS.gene09228:CDS 35.0%
GAGATGTTATATGAGTGGTA+TGG + chr4.1:14939124-14939143 MS.gene09228:intron 35.0%
GATATCATCATACAGTCGAA+AGG - chr4.1:14941295-14941314 None:intergenic 35.0%
GCATTAAGTTACAGAAGACT+TGG + chr4.1:14940045-14940064 MS.gene09228:intron 35.0%
GCTTACCCAATTTGTAAAGT+TGG - chr4.1:14941648-14941667 None:intergenic 35.0%
GGAAATAATATAGACTTCGC+TGG + chr4.1:14940066-14940085 MS.gene09228:intron 35.0%
GGACAACCAGATCTAAAAAA+AGG - chr4.1:14937157-14937176 None:intergenic 35.0%
GGGATAATGATTGGAACTTT+AGG - chr4.1:14939981-14940000 None:intergenic 35.0%
GTGAGCCAACTTTACAAATT+GGG + chr4.1:14941640-14941659 MS.gene09228:CDS 35.0%
TAAAGTTGGAGAAAAACCCT+AGG - chr4.1:14936747-14936766 None:intergenic 35.0%
TACAGTACTAATCCATTCTG+TGG - chr4.1:14941881-14941900 None:intergenic 35.0%
TAGAGATTAATCATTACCGC+TGG - chr4.1:14939722-14939741 None:intergenic 35.0%
TATGATACATAGACACCCTT+AGG - chr4.1:14939506-14939525 None:intergenic 35.0%
TCAATGCTCACTAGTATGTA+TGG + chr4.1:14937729-14937748 MS.gene09228:intron 35.0%
TCATCTTCTTACGTGTCAAT+TGG - chr4.1:14938569-14938588 None:intergenic 35.0%
TCTTTGGATTCCAATCTGTT+TGG - chr4.1:14940930-14940949 None:intergenic 35.0%
TGTGAGCCAACTTTACAAAT+TGG + chr4.1:14941639-14941658 MS.gene09228:CDS 35.0%
TTAACTCCTATACTCATGGT+TGG - chr4.1:14939644-14939663 None:intergenic 35.0%
TTGCTGAACTGCAATTTGAA+CGG + chr4.1:14938669-14938688 MS.gene09228:intron 35.0%
TTTCGAAGAACTTTCAACGA+TGG - chr4.1:14940890-14940909 None:intergenic 35.0%
! AACGATATCTCTTGCCTTTT+TGG + chr4.1:14940549-14940568 MS.gene09228:intron 35.0%
! AAGGTGTTTGTGTTTGATTC+AGG - chr4.1:14938007-14938026 None:intergenic 35.0%
! ACAGGAATATTTGAAGCTGA+AGG + chr4.1:14939671-14939690 MS.gene09228:CDS 35.0%
! AGGATCATAGTTGTTTCCAA+AGG - chr4.1:14937137-14937156 None:intergenic 35.0%
! ATAGTCTTTTCCATCACTCT+TGG + chr4.1:14937024-14937043 MS.gene09228:intron 35.0%
! CATGTGTCAGATTTTTGTGT+GGG + chr4.1:14939460-14939479 MS.gene09228:intron 35.0%
! CCTTGGTAACATATCTTTCA+TGG + chr4.1:14938367-14938386 MS.gene09228:intron 35.0%
! CTCAAAATGGGCTTAAATGT+GGG - chr4.1:14940002-14940021 None:intergenic 35.0%
! CTCATAGAGTTTTCCTCTAT+TGG - chr4.1:14936076-14936095 None:intergenic 35.0%
! CTTTTTCTTCTAGTGGTTGT+GGG + chr4.1:14940505-14940524 MS.gene09228:intron 35.0%
! TAAGGGCATATGCATATTCA+AGG + chr4.1:14940397-14940416 MS.gene09228:intron 35.0%
! TCAAAATGGGCTTAAATGTG+GGG - chr4.1:14940001-14940020 None:intergenic 35.0%
! TCTCAAAATGGGCTTAAATG+TGG - chr4.1:14940003-14940022 None:intergenic 35.0%
! TTATATGCCGTGTTACGTTT+TGG + chr4.1:14938510-14938529 MS.gene09228:intron 35.0%
! TTTTTCTTCTAGTGGTTGTG+GGG + chr4.1:14940506-14940525 MS.gene09228:intron 35.0%
!! ATGAGTTTTGTAGCAGTTCA+AGG + chr4.1:14936091-14936110 MS.gene09228:CDS 35.0%
!! GTGTTACGTTTTGGACAATT+TGG + chr4.1:14938519-14938538 MS.gene09228:intron 35.0%
!! TACATACTAGTGAGCATTGA+TGG - chr4.1:14937729-14937748 None:intergenic 35.0%
!! TTTTTAACTGTGGCCTTGAT+AGG + chr4.1:14939790-14939809 MS.gene09228:intron 35.0%
!!! ATTGGGTAAGCACTTTTTCT+TGG + chr4.1:14941657-14941676 MS.gene09228:intron 35.0%
!!! CTGGTACATGTTTTTTCTCA+TGG + chr4.1:14937187-14937206 MS.gene09228:intron 35.0%
AACCTTATGGGAGAAGATCT+TGG + chr4.1:14939813-14939832 MS.gene09228:CDS 40.0%
AAGTTACCTTCGCTAAACGA+AGG + chr4.1:14935980-14935999 MS.gene09228:CDS 40.0%
AGCATGAATTGGGTCTGTAA+AGG - chr4.1:14941222-14941241 None:intergenic 40.0%
AGCATGAGTAATTACATGGG+AGG + chr4.1:14942389-14942408 MS.gene09228:CDS 40.0%
AGCTATACTTCTCTGAACCT+AGG + chr4.1:14936727-14936746 MS.gene09228:intron 40.0%
AGGCTAGTGTAGAAAAACTG+TGG + chr4.1:14940652-14940671 MS.gene09228:intron 40.0%
AGGTACCAGAAATGCAACTA+TGG + chr4.1:14938312-14938331 MS.gene09228:CDS 40.0%
AGGTGCATTTCCTTGTTGAT+TGG + chr4.1:14938058-14938077 MS.gene09228:intron 40.0%
AGTATGTATGGTTGCACCTT+GGG + chr4.1:14937741-14937760 MS.gene09228:intron 40.0%
AGTTCAGTTTCAGTTAGCAG+TGG - chr4.1:14940979-14940998 None:intergenic 40.0%
ATACACTAGGAAGAGAGAAG+AGG + chr4.1:14939397-14939416 MS.gene09228:intron 40.0%
ATAGGAGTTAAGCAGTCAAC+AGG + chr4.1:14939653-14939672 MS.gene09228:intron 40.0%
ATATGCTAAGTGAGGCTAAC+AGG + chr4.1:14941367-14941386 MS.gene09228:CDS 40.0%
ATTATCCACTCCAAGAGTGA+TGG - chr4.1:14937037-14937056 None:intergenic 40.0%
CAATCTCAAAGCCACCAAAA+AGG - chr4.1:14940566-14940585 None:intergenic 40.0%
CATACACACAAACATCCCAA+TGG + chr4.1:14937251-14937270 MS.gene09228:intron 40.0%
CCAAAGAGAGCAAAAACCAT+TGG - chr4.1:14937270-14937289 None:intergenic 40.0%
CCACAACCACTAGAAGAAAA+AGG - chr4.1:14940507-14940526 None:intergenic 40.0%
CCACACAAAAATCTGACACA+TGG - chr4.1:14939462-14939481 None:intergenic 40.0%
CCCATGTAATTACTCATGCT+TGG - chr4.1:14942389-14942408 None:intergenic 40.0%
CGATTCTTCCTTCATCTCAA+TGG + chr4.1:14940761-14940780 MS.gene09228:intron 40.0%
CTAGTGTATGCGATGTACAA+GGG - chr4.1:14939386-14939405 None:intergenic 40.0%
CTGCTTAACTCCTATACTCA+TGG - chr4.1:14939648-14939667 None:intergenic 40.0%
CTTGGCTCAATCATTGATCA+TGG + chr4.1:14941675-14941694 MS.gene09228:intron 40.0%
GAAATTGATGAGTACCCTTG+TGG - chr4.1:14939907-14939926 None:intergenic 40.0%
GAAGCAGATAAGATCCACAA+GGG + chr4.1:14939890-14939909 MS.gene09228:CDS 40.0%
GACAACACCATATTGCTCTT+TGG - chr4.1:14936911-14936930 None:intergenic 40.0%
GCTATACTTCTCTGAACCTA+GGG + chr4.1:14936728-14936747 MS.gene09228:intron 40.0%
GCTGAGTTTAGACCTAAAAG+AGG - chr4.1:14936498-14936517 None:intergenic 40.0%
GGCTAGTGTAGAAAAACTGT+GGG + chr4.1:14940653-14940672 MS.gene09228:intron 40.0%
GTAGGAACATATGCTAAGTG+AGG + chr4.1:14941359-14941378 MS.gene09228:intron 40.0%
GTTTATATACCTTGGAGGCT+TGG + chr4.1:14940821-14940840 MS.gene09228:intron 40.0%
TAACAGGTCTCTCAGACAAA+GGG + chr4.1:14941383-14941402 MS.gene09228:CDS 40.0%
TAGTATGTATGGTTGCACCT+TGG + chr4.1:14937740-14937759 MS.gene09228:intron 40.0%
TGAAGCAGATAAGATCCACA+AGG + chr4.1:14939889-14939908 MS.gene09228:CDS 40.0%
TGAGTAATTACATGGGAGGA+TGG + chr4.1:14942393-14942412 MS.gene09228:CDS 40.0%
TGTGGATCTTATCTGCTTCA+AGG - chr4.1:14939889-14939908 None:intergenic 40.0%
TTCCGTTTCTGTGAATGTCT+CGG + chr4.1:14936306-14936325 MS.gene09228:intron 40.0%
TTTACAGACCCAATTCATGC+TGG + chr4.1:14941221-14941240 MS.gene09228:intron 40.0%
! AAGAGGTATATTGCCACCTA+AGG + chr4.1:14939487-14939506 MS.gene09228:intron 40.0%
! ACATGGAGGTGTAGAATGAA+GGG - chr4.1:14939034-14939053 None:intergenic 40.0%
! AGAGGTATATTGCCACCTAA+GGG + chr4.1:14939488-14939507 MS.gene09228:intron 40.0%
! ATGGTTTTTGCTCTCTTTGG+TGG + chr4.1:14937270-14937289 MS.gene09228:intron 40.0%
! ATTTTTGTGTGGGTGTCAAG+AGG + chr4.1:14939470-14939489 MS.gene09228:intron 40.0%
! CCAATGGTTTTTGCTCTCTT+TGG + chr4.1:14937267-14937286 MS.gene09228:intron 40.0%
! CCATGTGTCAGATTTTTGTG+TGG + chr4.1:14939459-14939478 MS.gene09228:intron 40.0%
! CCTTTTTCTTCTAGTGGTTG+TGG + chr4.1:14940504-14940523 MS.gene09228:intron 40.0%
! GATATCTCTTGCCTTTTTGG+TGG + chr4.1:14940552-14940571 MS.gene09228:intron 40.0%
! GTTGGTGGAAGAGAAAGAAA+AGG + chr4.1:14939059-14939078 MS.gene09228:intron 40.0%
! GTTTGTTGCATAGAGTGATC+AGG - chr4.1:14939012-14939031 None:intergenic 40.0%
! TCACTTTCAAGTCTATGACC+TGG + chr4.1:14937938-14937957 MS.gene09228:intron 40.0%
! TGCGATGTACAAGGGTATAT+AGG - chr4.1:14939378-14939397 None:intergenic 40.0%
!! GATCACACCACATGTTTTTG+TGG - chr4.1:14942168-14942187 None:intergenic 40.0%
!! TGAGAGTCTGCTTATTTCTG+TGG + chr4.1:14937414-14937433 MS.gene09228:intron 40.0%
!! TGATGCTCTTTTAATTGGGG+AGG + chr4.1:14940632-14940651 MS.gene09228:intron 40.0%
!! TGTGTTGAAGAAATGGGCTA+TGG + chr4.1:14941567-14941586 MS.gene09228:CDS 40.0%
!! TTGAAGAAATGGGCTATGGT+CGG + chr4.1:14941571-14941590 MS.gene09228:CDS 40.0%
!! TTTAAGTTGCAGCTATCAGC+CGG + chr4.1:14942337-14942356 MS.gene09228:intron 40.0%
!!! CTTTTTGGTGGCTTTGAGAT+TGG + chr4.1:14940564-14940583 MS.gene09228:intron 40.0%
AAATCTGACACATGGCCACA+TGG - chr4.1:14939454-14939473 None:intergenic 45.0%
AAGCATTACAACGATCCCAG+CGG + chr4.1:14939703-14939722 MS.gene09228:CDS 45.0%
AATGCGCCAACCATGAGTAT+AGG + chr4.1:14939635-14939654 MS.gene09228:intron 45.0%
ACCAGATCTGTTTCAAACGC+TGG - chr4.1:14936548-14936567 None:intergenic 45.0%
ACCTTCGCTAAACGAAGGAA+CGG + chr4.1:14935985-14936004 MS.gene09228:CDS 45.0%
AGAGAAAATGTGCTTGTGCG+AGG + chr4.1:14939427-14939446 MS.gene09228:intron 45.0%
CCTAGTGTATGCGATGTACA+AGG - chr4.1:14939387-14939406 None:intergenic 45.0%
CCTTGTACATCGCATACACT+AGG + chr4.1:14939384-14939403 MS.gene09228:intron 45.0%
CTAACAGGTCTCTCAGACAA+AGG + chr4.1:14941382-14941401 MS.gene09228:CDS 45.0%
CTCCCATAAGGTTCCTATCA+AGG - chr4.1:14939806-14939825 None:intergenic 45.0%
CTCTCTTCCACCAAACATCA+CGG + chr4.1:14939240-14939259 MS.gene09228:intron 45.0%
GACAGAAGAGGTGATACTAG+AGG - chr4.1:14937071-14937090 None:intergenic 45.0%
GATACATAGACACCCTTAGG+TGG - chr4.1:14939503-14939522 None:intergenic 45.0%
GGATCTTATCTGCTTCAAGG+AGG - chr4.1:14939886-14939905 None:intergenic 45.0%
GGCCTTGATAGGAACCTTAT+GGG + chr4.1:14939801-14939820 MS.gene09228:intron 45.0%
GTCTCTCTTCATGATTCACC+AGG + chr4.1:14937318-14937337 MS.gene09228:intron 45.0%
TACACCTCCATGTGACATGT+TGG + chr4.1:14939041-14939060 MS.gene09228:intron 45.0%
TCGAAAACAGATTGGGATCG+TGG + chr4.1:14940904-14940923 MS.gene09228:intron 45.0%
TCTTCCACCAACATGTCACA+TGG - chr4.1:14939051-14939070 None:intergenic 45.0%
TGCATGTATGCAGTCTTGAG+CGG - chr4.1:14940337-14940356 None:intergenic 45.0%
TTCGCTGGTATTCACAGAAG+TGG + chr4.1:14940081-14940100 MS.gene09228:intron 45.0%
! CACATGGAGGTGTAGAATGA+AGG - chr4.1:14939035-14939054 None:intergenic 45.0%
! CTTTTCCATCACTCTTGGAG+TGG + chr4.1:14937029-14937048 MS.gene09228:intron 45.0%
! TGGCCTTGATAGGAACCTTA+TGG + chr4.1:14939800-14939819 MS.gene09228:intron 45.0%
!! TACTGGTTTGTGTTAGCCCT+AGG + chr4.1:14940846-14940865 MS.gene09228:intron 45.0%
!! TTATAAAATATAAATTATTG+AGG - chr4.1:14938226-14938245 None:intergenic 5.0%
!!! TACATTTAATTTTTTTTATA+AGG + chr4.1:14937554-14937573 MS.gene09228:intron 5.0%
!!! TTAAATCTATATTTTTTTTT+TGG + chr4.1:14942236-14942255 MS.gene09228:intron 5.0%
AAGAGCTCGAGTCGCTTGAA+AGG + chr4.1:14939850-14939869 MS.gene09228:CDS 50.0%
AATAGGTGCAGAGGAGAGCT+TGG + chr4.1:14940373-14940392 MS.gene09228:intron 50.0%
ACAGCTGGTCCAGCATGAAT+TGG - chr4.1:14941233-14941252 None:intergenic 50.0%
ACATCACGGTGTGGTGTAGA+AGG + chr4.1:14939254-14939273 MS.gene09228:intron 50.0%
ACCGTTCCTTCGTTTAGCGA+AGG - chr4.1:14935989-14936008 None:intergenic 50.0%
ACCTCCATGTGACATGTTGG+TGG + chr4.1:14939044-14939063 MS.gene09228:intron 50.0%
ACGCTGGCGAAGCGAAAATA+TGG - chr4.1:14936532-14936551 None:intergenic 50.0%
CAGCTGGTCCAGCATGAATT+GGG - chr4.1:14941232-14941251 None:intergenic 50.0%
CATCACGGTGTGGTGTAGAA+GGG + chr4.1:14939255-14939274 MS.gene09228:intron 50.0%
CCAAGTCAAACTCAGGGTGA+TGG + chr4.1:14941597-14941616 MS.gene09228:CDS 50.0%
CCATCACCCTGAGTTTGACT+TGG - chr4.1:14941600-14941619 None:intergenic 50.0%
CGCCGAGACATTCACAGAAA+CGG - chr4.1:14936311-14936330 None:intergenic 50.0%
CGGCATCCAAGTCAAACTCA+GGG + chr4.1:14941591-14941610 MS.gene09228:CDS 50.0%
CTACACCACACCGTGATGTT+TGG - chr4.1:14939253-14939272 None:intergenic 50.0%
CTAGGAAGAGAGAAGAGGAG+AGG + chr4.1:14939402-14939421 MS.gene09228:intron 50.0%
CTGTGCAGCCATTGAGATGA+AGG - chr4.1:14940772-14940791 None:intergenic 50.0%
GCAGAGGAGAGCTTGGATAA+GGG + chr4.1:14940380-14940399 MS.gene09228:intron 50.0%
GCATGCTGAAAACGCTAGAG+AGG + chr4.1:14938292-14938311 MS.gene09228:intron 50.0%
GCCATGTTGACACCTTCCTA+GGG - chr4.1:14940865-14940884 None:intergenic 50.0%
GCGCACCATAGTTGCATTTC+TGG - chr4.1:14938320-14938339 None:intergenic 50.0%
GCTGTCTGATCTTCAACGCA+AGG + chr4.1:14941248-14941267 MS.gene09228:CDS 50.0%
GGCCAAGATCTTCTCCCATA+AGG - chr4.1:14939818-14939837 None:intergenic 50.0%
GGTTTGTGTTAGCCCTAGGA+AGG + chr4.1:14940850-14940869 MS.gene09228:intron 50.0%
TCCACCAACATGTCACATGG+AGG - chr4.1:14939048-14939067 None:intergenic 50.0%
TCGGCATCCAAGTCAAACTC+AGG + chr4.1:14941590-14941609 MS.gene09228:CDS 50.0%
TGCAGAGGAGAGCTTGGATA+AGG + chr4.1:14940379-14940398 MS.gene09228:intron 50.0%
TGCCATGTTGACACCTTCCT+AGG - chr4.1:14940866-14940885 None:intergenic 50.0%
TGCGTTGAAGATCAGACAGC+TGG - chr4.1:14941248-14941267 None:intergenic 50.0%
TTCCACCAAACATCACGGTG+TGG + chr4.1:14939245-14939264 MS.gene09228:intron 50.0%
! CGTGCAGACACATTAGTCTC+AGG - chr4.1:14938342-14938361 None:intergenic 50.0%
! GCCAGCGTTTGAAACAGATC+TGG + chr4.1:14936544-14936563 MS.gene09228:intron 50.0%
!! AAGGGATGGTTTGCTACGTG+GGG + chr4.1:14939273-14939292 MS.gene09228:intron 50.0%
!! AGAAGGGATGGTTTGCTACG+TGG + chr4.1:14939271-14939290 MS.gene09228:intron 50.0%
!! GAAGGGATGGTTTGCTACGT+GGG + chr4.1:14939272-14939291 MS.gene09228:intron 50.0%
!! GCTTTGAGATTGGTGAGGGT+AGG + chr4.1:14940574-14940593 MS.gene09228:intron 50.0%
!! GGTGGCTTTGAGATTGGTGA+GGG + chr4.1:14940570-14940589 MS.gene09228:intron 50.0%
!! TGGTGGCTTTGAGATTGGTG+AGG + chr4.1:14940569-14940588 MS.gene09228:intron 50.0%
ACCAGTAGTCCAAGCCTCCA+AGG - chr4.1:14940833-14940852 None:intergenic 55.0%
ACCTTGGAGGCTTGGACTAC+TGG + chr4.1:14940829-14940848 MS.gene09228:intron 55.0%
ACGGTGTGGTGTAGAAGGGA+TGG + chr4.1:14939259-14939278 MS.gene09228:intron 55.0%
CACCACACCGTGATGTTTGG+TGG - chr4.1:14939250-14939269 None:intergenic 55.0%
CGAGCTCTTTGCTGCTCAGA+GGG - chr4.1:14939839-14939858 None:intergenic 55.0%
GGATCCAGGGTCAGTCTGTA+CGG + chr4.1:14942358-14942377 MS.gene09228:CDS 55.0%
GGGATCGTGGCCAAACAGAT+TGG + chr4.1:14940917-14940936 MS.gene09228:intron 55.0%
GTACAGACTGACCCTGGATC+CGG - chr4.1:14942359-14942378 None:intergenic 55.0%
GTATGCAGTCTTGAGCGGCT+AGG - chr4.1:14940332-14940351 None:intergenic 55.0%
TCGAGCTCTTTGCTGCTCAG+AGG - chr4.1:14939840-14939859 None:intergenic 55.0%
TCTTCTAGTGGTTGTGGGGC+TGG + chr4.1:14940510-14940529 MS.gene09228:intron 55.0%
TGTGTCTGCACGAGAAGCCT+TGG + chr4.1:14938350-14938369 MS.gene09228:CDS 55.0%
!! GCCCTAGGAAGGTGTCAACA+TGG + chr4.1:14940861-14940880 MS.gene09228:intron 55.0%
CTAGTGGTTGTGGGGCTGGA+TGG + chr4.1:14940514-14940533 MS.gene09228:intron 60.0%
GCAGCTATCAGCCGGATCCA+GGG + chr4.1:14942345-14942364 MS.gene09228:intron 60.0%
GTGCTTGTGCGAGGTCCATG+TGG + chr4.1:14939436-14939455 MS.gene09228:intron 60.0%
TGCAGCTATCAGCCGGATCC+AGG + chr4.1:14942344-14942363 MS.gene09228:intron 60.0%
!! GGATGGTTTGCTACGTGGGG+TGG + chr4.1:14939276-14939295 MS.gene09228:intron 60.0%
CCAGGGTCAGTCTGTACGGC+AGG + chr4.1:14942362-14942381 MS.gene09228:CDS 65.0%
CCTGCCGTACAGACTGACCC+TGG - chr4.1:14942365-14942384 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 14935928 14942424 14935928 ID=MS.gene09228
chr4.1 mRNA 14935928 14942424 14935928 ID=MS.gene09228.t1;Parent=MS.gene09228
chr4.1 exon 14935928 14936112 14935928 ID=MS.gene09228.t1.exon1;Parent=MS.gene09228.t1
chr4.1 CDS 14935928 14936112 14935928 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14938293 14938371 14938293 ID=MS.gene09228.t1.exon2;Parent=MS.gene09228.t1
chr4.1 CDS 14938293 14938371 14938293 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14939657 14939724 14939657 ID=MS.gene09228.t1.exon3;Parent=MS.gene09228.t1
chr4.1 CDS 14939657 14939724 14939657 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14939812 14939911 14939812 ID=MS.gene09228.t1.exon4;Parent=MS.gene09228.t1
chr4.1 CDS 14939812 14939911 14939812 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14941228 14941269 14941228 ID=MS.gene09228.t1.exon5;Parent=MS.gene09228.t1
chr4.1 CDS 14941228 14941269 14941228 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14941363 14941404 14941363 ID=MS.gene09228.t1.exon6;Parent=MS.gene09228.t1
chr4.1 CDS 14941363 14941404 14941363 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14941525 14941661 14941525 ID=MS.gene09228.t1.exon7;Parent=MS.gene09228.t1
chr4.1 CDS 14941525 14941661 14941525 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
chr4.1 exon 14942349 14942424 14942349 ID=MS.gene09228.t1.exon8;Parent=MS.gene09228.t1
chr4.1 CDS 14942349 14942424 14942349 ID=cds.MS.gene09228.t1;Parent=MS.gene09228.t1
Gene Sequence

>MS.gene09228

ATGGGAAGAGGAAGAGTTGAGTTGAAGAGAATTGAAAACAAAATCAACAGACAAGTTACCTTCGCTAAACGAAGGAACGGTCTTTTGAAAAAAGCATATGAACTTTCTGTTCTTTGTGATGCTGAAGTTGCTCTTATCATCTTCTCCAATAGAGGAAAACTCTATGAGTTTTGTAGCAGTTCAAGGTATCTTATCTTATGCTACAACAAAACCTAAAATCTCTCTTTCTTTTTATTTTTTCAAAGATCTTCACTCCTTTCGATTTTTGCTTTTTTCATATATGAGAAGAGAAATATTTAATATTATTATAAGTTTATTTGTGAAAACGTGAAAAAAAAATGAATAAAGTTGATTTTTAATTTTCACTGTTTGAGTTTTTTCCGTTTCTGTGAATGTCTCGGCGTTTATAGAAGTTTGAGTGTTTCTGCAATTGTATTCATGTTAGATCTGCAACTGGAAACTCAATAAACAAATAAATATATATTTTAAAAATATCACTGTTGTATTGTATTTAATCTATTTTATTTATTTATTTCTTCTGTTGCTTTCTCTTTCTTTTTTTCTTTCCCTCTTTTAGGTCTAAACTCAGCCTCTGAAATTACCATATTTTCGCTTCGCCAGCGTTTGAAACAGATCTGGTTCAAAAGCCTTTTCCAAAAGCAATTTTTGTGACTATAGTCAGGTCTCTTTTCAGTGTAAATTAAGTGTATAATCAATTTTTTCTTCCATTTTCAGTGTTAATAGCTAGTTTGCTTTTCTGGTTCATTGTTCAAAAATCACTTAAACAATGTAAACTAAAAGCTATACTTCTCTGAACCTAGGGTTTTTCTCCAACTTTAACTTTTTCAATTTTTGTATTATATATTATTAGTTTTTTAATATATAATAATATATATATATTCCCCTTTTTTGGTGAAACACAAATACCCTTGAATTTCATGGGACTTTGTCTTGGATCCAAATTCCATTATCTTTTATGTCCAAAGAGCAATATGGTGTTGTCAATTTTCTTAATAATTTCTTGTACTATATTTTTTTTTCCTTCTTTCAATTCATTGTTTCATGATAGTGATTTTTGGTTAAATTAGAATTCAGAATAGTCTTTTCCATCACTCTTGGAGTGGATAATAACATGAATGACCTCTAGTATCACCTCTTCTGTCAATAAATGTTTTTCAATCACTTCATTTCTTGTTTTCATATTTTCCTTTGGAAACAACTATGATCCTTTTTTTAGATCTGGTTGTCCAAAAAAAAATCTGGTACATGTTTTTTCTCATGGATTAAAAAGTGACACTCCTCATAAATGGTCTAAATCTTACACATACACACAAACATCCCAATGGTTTTTGCTCTCTTTGGTGGTCTTAATAATGTTTCTTATTTAGCAGTCTCTCTTCATGATTCACCAGGTAAAATATGTGTTGATTATTAATGATTTATGGGTAAATTATGTATATACACTGTGATGTTATTGTAAATATTTTGAGAGTCTGCTTATTTCTGTGGAATATGAAATGAAATCTTTTAACTGATGAATCTCTATATGATCAAGAGATTGAGGTTGATTTGATGTCATTTGAAGCCTTTTGATTATAGCCCTAAAACATTGCTGAAAATATCTTTTACATTTAATTTTTTTTATAAGGAATTTTTTAATTTTTGGTTTGCTAATTTCTGTCAAGCAAATATTTTATATTATTTAGTTTTGAGAGGAAATATTTCAGATTATTATATACTAAGAATATGGAATAAGCAGTAATACATTTTTGTCAAGGAAAATATACAATATTATTTTCCATCAATGCTCACTAGTATGTATGGTTGCACCTTGGGATGATTCAAAATTGATTTTAGAGTTGTAAATTTAATTCTATGATGTTTGGATGTACTCATTTTGTCTTTAGAAATTATTCTAATTTGAAGATAGAATTTGAATTTTTTTGCATCTACAAATAAATTTTACTCTCAAAGATAAGTAACATGAATCTATTTAAAGATAAAAAAACATCACTTTCAAGTCTATGACCTGGATCACTAAAAAAAAAGTCCATGACTTGGAATCAATTTTTACTTCCTGAATCAAACACAAACACCTTAAGTTGTCCCAATTTGTTGCTTGCAAAATTTAGGTGCATTTCCTTGTTGATTGGTTTTTAAGCAATCTCCTTGATAATTTGTTATTGCCTCTTATTCTTTTTTTGTCCTTAATTAATTTGATGCTTTTTTGACATATTAATTTGGTGTTAGGCATAAGGAAAACTTAATTATGTTTTAAGAGAGGGTTTAATTTGTCCTCAATAATTTATATTTTATAATTTTTTGTATGTTATACAAGTTATTTATCTTTGTCAATGTGCTGCAGCATGCTGAAAACGCTAGAGAGGTACCAGAAATGCAACTATGGTGCGCCTGAGACTAATGTGTCTGCACGAGAAGCCTTGGTAACATATCTTTCATGGAAAATGTTTGATCTTATATAAAATCATTATGTTAATTGTCCTTTTATCTTGACTAAAAAAACTTGACTATTTTACAGTCAAATTCTTTTTCTTTTTTGTTGACTAATTTTGATATTTTTCTTATATGCCGTGTTACGTTTTGGACAATTTGGCTTGTTATTTTTTTGTTAATATAACCAATTGACACGTAAGAAGATGAACAACTATGAAAACAAATAATACAACCATGAAAACTCCAATAGATAATTCATCATGTTCTAGAAAATAATTGAATTTGATTTGCTGAACTGCAATTTGAACGGCCTATAGTCTACCATCATATTATAAATTACAACTAATTTACTTTATTGTTTATTCATATAGAAAGAAACAATATTTAAATGCAAAAAAGGCTCTATCTGATTCGTTTAATGTTTTCTTTTCATTTTTAGTTAATTTGTTTTCATTAATAAAATAGGAAACAAATTTAGAAATGATGTTTTTATCTTCTATTTTTGACAAAAAATAAGTCTTTATCTTCTATCCTTTATCTTTTCATATGTATTATTTAAATAAAAACTGAATCCAAAACGAAAACTTTAAAAAATGATACACTAATTTTTACAATGAGTAGTGATATCCTGATCACTCTATGCAACAAACCCTTCATTCTACACCTCCATGTGACATGTTGGTGGAAGAGAAAGAAAAGGAATGATAAAAGGAAAGGGAAATAGAAAATAAAAAAACCACATGAGATGTTATATGAGTGGTATGGGTTAACACCCTTTTTTTTTTCATACCACTCATATATCATCTCATGTGACATTTTTTATTTTATATTTTCATTCCTTTTTGTCATTCTCTTTTTCTCTCTTCCACCAAACATCACGGTGTGGTGTAGAAGGGATGGTTTGCTACGTGGGGTGGCTTCTTTTACAATTTTTAACTTAACATGTCAATTTTGTCAAAAAATAAGAAAAATGTTAGATAGACACCATTTATTCCTATATACCCTTGTACATCGCATACACTAGGAAGAGAGAAGAGGAGAGGAAAGAGAAAATGTGCTTGTGCGAGGTCCATGTGGCCATGTGTCAGATTTTTGTGTGGGTGTCAAGAGGTATATTGCCACCTAAGGGTGTCTATGTATCATAACTCAAAAAATAAACGTGTTGATTGGACTCCTCTATTTTTTTGTGCGTGTATTCATGTGTCTAAGTACTTACTATAAGCAATGCCTTATGTGCTTATTTCTCTAATTTAAATGCGCCAACCATGAGTATAGGAGTTAAGCAGTCAACAGGAATATTTGAAGCTGAAGGCACGTTATGAAGCATTACAACGATCCCAGCGGTAATGATTAATCTCTATTTCATTTTTATCTTTAAATACTGTTGATAACAGAGTGCCTAATACTGTTTTTAACTGTGGCCTTGATAGGAACCTTATGGGAGAAGATCTTGGCCCTCTGAGCAGCAAAGAGCTCGAGTCGCTTGAAAGGCAGCTAGATTCCTCCTTGAAGCAGATAAGATCCACAAGGGTACTCATCAATTTCCAAATTTTGACATTGCCATTTGCTATATGAAATTCCAAAGGAAAACATAATCCTAAAGTTCCAATCATTATCCCCACATTTAAGCCCATTTTGAGAGTTTTAGCTAAGTTATTGTTCTGCATTAAGTTACAGAAGACTTGGAAATAATATAGACTTCGCTGGTATTCACAGAAGTGGTCTAGAAGTTGACACAGTAGCTAAATCTAGTAATTAAATTTATTTAATAGAGTATCAGAGGTAATTTAACTCATACAACTGTGTTCTTAATAAGCACAGAAATTTATTTGAAGAAAGAAAAGCTTAACTTAAGCACAAGGTGTGCTATGCAGAAGTATACAATAAAGTCTGAATCAAATTTCATGAATTATGATACCAAAAGGTTAGGAAATTAAAAATGCTAAGCCTAGCCGCTCAAGACTGCATACATGCAACAATGCATATGAAGAAATAGGTGCAGAGGAGAGCTTGGATAAGGGCATATGCATATTCAAGGTTTATCTGTTCTGATTAATCGTTGTTGCGCTGAATAAATAGATATTTGTAGGTCTAAAGCATGGATAAACCAATCGGTTTATTTCCTTTTTCTTCTAGTGGTTGTGGGGCTGGATGGTTTAATAAACCAAACGATATCTCTTGCCTTTTTGGTGGCTTTGAGATTGGTGAGGGTAGGTCAGATGTGATAGTATCTCACTTGAAGTTTGTAGATGATGCTCTTTTAATTGGGGAGGCTAGTGTAGAAAAACTGTGGGTAATGAAGGTCGATTCTACGATGATTTGAGTTAGCTTTTAGTTTGAAAGTGAGATTCTTTAAGAGTAGACTTTCTTGTGTAAAGTCGATTCTTCCTTCATCTCAATGGCTGCACAGTTTCTCAATTGTAAGCTAGGGTTGCTGATGTTTATATACCTTGGAGGCTTGGACTACTGGTTTGTGTTAGCCCTAGGAAGGTGTCAACATGGCAACCATCGTTGAAAGTTCTTCGAAAACAGATTGGGATCGTGGCCAAACAGATTGGAATCCAAAGAGTCACTAATGACAAAACAAGAAGAAGCCACTGCTAACTGAAACTGAACTATCCTTCATTAGTTTAATCTGTAATAATGATAAGGAGGTTAAGGATTCTATCTCCACCAACAATATATATGACTGACATTAGCATATACTACCACTAACATACTAATATTTTTCATATGAAAAAAATTGTAATCTTTGAAGTAAAAACTCTTAATTATGTGCATTCTTCATTGGAAGTAAATACAGTATATATATGTTATTTAATTTTGTAAATTTGTTTCCTTTACAGACCCAATTCATGCTGGACCAGCTGTCTGATCTTCAACGCAAGGTATGAGAATAATTTTTCTTTCCCTTTCGACTGTATGATGATATCTTCTTCTAGCAGTCAGCTTTTACTCACCAATTAATGTTACTTATGTAGGAACATATGCTAAGTGAGGCTAACAGGTCTCTCAGACAAAGGGTACGTACATAAAAAACACCTCATCAATCATGTTAAGCTAAAGAAATCAACAAAAATATATATGACCAAGCAACTGATATTGTCATATTGAAAATCAGTAAGTGACTCTTTGTTATTTAGCAGTTGGAAGGGTATCAATTGAATCAACTCCAAATGAATGCATGTGTTGAAGAAATGGGCTATGGTCGGCATCCAAGTCAAACTCAGGGTGATGGTCTTTATCAACAATTGGAGTGTGAGCCAACTTTACAAATTGGGTAAGCACTTTTTCTTGGCTCAATCATTGATCATGGTTGATAATGTTTTGATCACACTTCACACTCAACTATGTTGCAAACATCATGATGTGCATTTCTTTTAGGCATTTGATATCTTAGGAATAGCATGTGTGATGCAAATATGATTAGTACTAGTGTTGCTTGATATGTAAGCTTAAATGACAACTGAATTCGAACATAAGCAATTTCAAATAGCCACAGAATGGATTAGTACTGTAGTAAGCTTAAAGTTATGATTTAAATTTCATTGGCACCAATTATACCAAAAAAATAGACAAGTTTTTGTGTATTAAAATGGGTTTGGGTTTTTATTAAAGAAAATTGGGGATATGATATGATACGATACTAAATTCATTTGATAACCAAATTATAATATATTGTTAAGAGATTAATCTCTACGCATGTAAATATTTTTTTACGCATATACATCCAATCAAATTTCATTATTGTGTCACTTTCATAGGTCAGTTCCTAAAATATCTCCACAAAAACATGTGGTGTGATCTGACTTGATGCATGTGTAAAAAACAATCATACAATCGGTGTATACAAATTAAATCTATATTTTTTTTTTGGTAGTGCAATTAAATTATTATTATCATTGTTATTTTAATATTGATTTGTTTTATTTTGATCTGAATAAAATGATATTTGTTTAAGTTGCAGCTATCAGCCGGATCCAGGGTCAGTCTGTACGGCAGGACCAAGCATGAGTAATTACATGGGAGGATGGTTACCATAG
Protein sequence

>MS.gene09228.t1

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNVSAREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRQLEGYQLNQLQMNACVEEMGYGRHPSQTQGDGLYQQLECEPTLQIGYQPDPGSVCTAGPSMSNYMGGWLP