AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20066

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20066.t1 MTR_7g101275 83.784 407 34 4 42 418 1 405 0.0 690
MS.gene20066.t1 MTR_0041s0120 78.043 419 48 5 42 418 1 417 0.0 651
MS.gene20066.t1 MTR_7g101280 72.843 394 28 4 1 318 1 391 0.0 570
MS.gene20066.t1 MTR_7g101280 81.651 109 20 0 310 418 489 597 1.26e-52 186
MS.gene20066.t1 MTR_0041s0110 72.843 394 28 4 1 318 1 391 0.0 570
MS.gene20066.t1 MTR_0041s0110 81.651 109 20 0 310 418 489 597 1.26e-52 186
MS.gene20066.t1 MTR_2g094570 49.330 373 117 6 14 318 48 416 1.41e-114 352
MS.gene20066.t1 MTR_2g094570 50.000 364 110 6 23 318 1 360 2.19e-114 350
MS.gene20066.t1 MTR_2g094570 50.000 364 110 6 23 318 1 360 2.81e-114 349
MS.gene20066.t1 MTR_1g064430 48.744 398 116 9 5 318 4 397 6.09e-114 349
MS.gene20066.t1 MTR_1g064430 42.017 119 56 5 311 418 497 613 6.80e-11 64.7
MS.gene20066.t1 MTR_1g064430 50.674 371 103 7 24 318 18 384 6.54e-114 348
MS.gene20066.t1 MTR_1g064430 42.017 119 56 5 311 418 484 600 6.68e-11 64.7
MS.gene20066.t1 MTR_1g094960 49.861 359 115 4 24 318 10 367 3.50e-113 345
MS.gene20066.t1 MTR_4g058930 49.584 361 108 7 30 318 9 367 6.55e-110 338
MS.gene20066.t1 MTR_4g058930 49.584 361 108 7 30 318 9 367 1.63e-109 337
MS.gene20066.t1 MTR_3g073420 41.457 357 136 10 29 318 15 365 1.36e-80 259
MS.gene20066.t1 MTR_1g024025 37.313 335 159 8 26 318 36 361 2.20e-62 218
MS.gene20066.t1 MTR_4g124900 37.152 323 159 7 28 312 18 334 1.47e-59 209
MS.gene20066.t1 MTR_4g124900 37.152 323 159 7 28 312 18 334 1.47e-59 209
MS.gene20066.t1 MTR_8g101360 38.192 343 165 9 10 312 9 344 1.87e-59 209
MS.gene20066.t1 MTR_2g043250 37.461 323 158 7 28 312 18 334 3.50e-59 208
MS.gene20066.t1 MTR_2g024430 37.195 328 149 11 30 318 17 326 2.37e-58 199
MS.gene20066.t1 MTR_2g014770 36.677 319 164 6 29 311 49 365 4.66e-57 197
MS.gene20066.t1 MTR_5g040880 35.398 339 157 11 28 326 6 322 1.51e-56 194
MS.gene20066.t1 MTR_2g014770 36.677 319 164 6 29 311 49 365 1.77e-56 197
MS.gene20066.t1 MTR_5g061220 35.057 348 148 9 28 312 14 346 2.31e-56 194
MS.gene20066.t1 MTR_5g040740 33.166 398 193 12 30 376 9 384 1.11e-55 189
MS.gene20066.t1 MTR_2g018690 36.957 322 157 9 28 309 18 333 1.49e-55 197
MS.gene20066.t1 MTR_4g021580 33.760 391 201 9 31 384 17 386 1.83e-55 193
MS.gene20066.t1 MTR_4g021580 33.760 391 201 9 31 384 17 386 2.73e-55 194
MS.gene20066.t1 MTR_4g088210 35.780 327 161 8 29 311 34 355 1.04e-54 192
MS.gene20066.t1 MTR_4g088210 35.780 327 161 8 29 311 34 355 1.64e-54 192
MS.gene20066.t1 MTR_2g005240 35.347 331 171 7 25 318 15 339 8.01e-54 190
MS.gene20066.t1 MTR_2g093740 36.420 324 158 8 33 311 56 376 9.77e-54 190
MS.gene20066.t1 MTR_5g076270 36.957 322 157 9 28 309 19 334 1.43e-53 191
MS.gene20066.t1 MTR_8g100050 37.812 320 151 11 33 312 59 370 2.59e-53 189
MS.gene20066.t1 MTR_2g093740 36.420 324 158 8 33 311 56 376 3.45e-53 190
MS.gene20066.t1 MTR_2g093740 36.420 324 158 8 33 311 56 376 3.73e-53 189
MS.gene20066.t1 MTR_8g079492 35.714 322 160 9 28 309 18 332 5.88e-53 190
MS.gene20066.t1 MTR_8g079492 35.714 322 160 9 28 309 18 332 6.02e-53 190
MS.gene20066.t1 MTR_8g100050 37.812 320 151 11 33 312 59 370 8.06e-53 189
MS.gene20066.t1 MTR_3g064050 37.152 323 155 10 28 309 21 336 1.20e-52 189
MS.gene20066.t1 MTR_4g060460 36.025 322 162 6 33 311 54 374 3.26e-51 184
MS.gene20066.t1 MTR_4g060460 36.025 322 162 6 33 311 54 374 3.33e-51 184
MS.gene20066.t1 MTR_2g093740 35.015 337 158 9 33 311 56 389 4.09e-50 180
MS.gene20066.t1 MTR_2g093740 35.015 337 158 9 33 311 56 389 8.92e-50 180
MS.gene20066.t1 MTR_7g062540 34.161 322 170 8 33 318 14 329 9.96e-50 179
MS.gene20066.t1 MTR_2g093740 35.015 337 158 9 33 311 56 389 1.14e-49 180
MS.gene20066.t1 MTR_8g079492 39.764 254 139 7 64 309 3 250 2.32e-49 179
MS.gene20066.t1 MTR_1g058210 32.812 320 171 7 28 312 7 317 2.90e-49 174
MS.gene20066.t1 MTR_8g027440 36.533 323 160 9 27 312 23 337 4.90e-49 177
MS.gene20066.t1 MTR_5g082140 35.294 323 157 9 28 312 7 315 7.44e-49 172
MS.gene20066.t1 MTR_2g006270 34.483 319 160 11 30 312 10 315 9.86e-48 169
MS.gene20066.t1 MTR_2g093740 44.550 211 109 4 107 311 38 246 1.16e-45 167
MS.gene20066.t1 MTR_2g093740 44.550 211 109 4 107 311 38 246 1.32e-45 167
MS.gene20066.t1 MTR_2g093740 41.964 224 109 5 107 311 38 259 2.64e-42 157
MS.gene20066.t1 MTR_2g093740 41.964 224 109 5 107 311 38 259 2.67e-42 158
MS.gene20066.t1 MTR_2g006380 33.856 319 157 13 30 312 17 317 2.08e-41 152
MS.gene20066.t1 MTR_8g446900 30.627 271 169 6 59 320 18 278 3.16e-33 129
MS.gene20066.t1 MTR_5g060780 28.135 327 170 11 30 312 9 314 1.24e-31 124
MS.gene20066.t1 MTR_5g061890 26.882 372 195 13 30 345 9 359 6.78e-31 122
MS.gene20066.t1 MTR_5g460920 28.135 327 170 11 30 312 9 314 9.32e-31 122
MS.gene20066.t1 MTR_5g062970 31.527 203 93 5 29 195 34 226 1.76e-27 109
MS.gene20066.t1 MTR_5g060630 26.554 354 192 11 28 318 7 355 5.52e-24 104
MS.gene20066.t1 MTR_5g460740 26.554 354 192 11 28 318 7 355 5.52e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20066.t1 AT4G30080 50.562 356 110 7 28 318 14 368 1.01e-108 335
MS.gene20066.t1 AT2G28350 49.311 363 111 8 28 318 5 366 1.46e-106 329
MS.gene20066.t1 AT2G28350 49.311 363 111 8 28 318 5 366 1.99e-106 329
MS.gene20066.t1 AT1G77850 37.607 351 159 5 27 318 13 362 2.88e-72 238
MS.gene20066.t1 AT1G77850 36.975 357 153 5 27 318 13 362 3.08e-72 238
MS.gene20066.t1 AT1G19850 36.752 351 168 9 17 321 34 376 1.03e-59 209
MS.gene20066.t1 AT1G19850 36.752 351 168 9 17 321 23 365 1.15e-59 209
MS.gene20066.t1 AT1G19220 38.390 323 155 7 28 312 18 334 1.02e-58 207
MS.gene20066.t1 AT5G20730 35.398 339 175 7 12 312 3 335 1.89e-56 201
MS.gene20066.t1 AT5G37020 37.152 323 155 10 28 309 17 332 8.78e-56 197
MS.gene20066.t1 AT5G20730 35.588 340 174 8 12 312 3 336 1.64e-55 198
MS.gene20066.t1 AT5G20730 35.588 340 174 8 12 312 3 336 1.70e-55 198
MS.gene20066.t1 AT5G37020 37.152 323 155 10 28 309 17 332 1.95e-55 196
MS.gene20066.t1 AT1G59750 37.888 322 159 8 33 318 22 338 1.11e-54 192
MS.gene20066.t1 AT1G59750 37.888 322 159 8 33 318 22 338 1.29e-54 192
MS.gene20066.t1 AT1G59750 37.888 322 159 8 33 318 22 338 1.29e-54 192
MS.gene20066.t1 AT1G59750 37.888 322 159 8 33 318 22 338 1.29e-54 192
MS.gene20066.t1 AT1G30330 35.920 348 171 10 1 309 1 335 2.41e-54 194
MS.gene20066.t1 AT1G30330 35.920 348 171 10 1 309 1 335 2.41e-54 194
MS.gene20066.t1 AT1G30330 37.072 321 158 9 28 309 18 333 1.14e-53 192
MS.gene20066.t1 AT5G60450 34.911 338 176 8 24 319 32 367 2.01e-52 187
MS.gene20066.t1 AT4G23980 34.985 323 166 8 33 318 12 327 2.48e-52 185
MS.gene20066.t1 AT4G23980 34.985 323 166 8 33 318 12 327 2.50e-52 185
MS.gene20066.t1 AT5G60450 35.258 329 169 8 33 319 65 391 7.34e-52 186
MS.gene20066.t1 AT5G62000 35.347 331 164 10 26 312 48 372 3.00e-51 185
MS.gene20066.t1 AT5G62000 35.347 331 164 10 26 312 48 372 3.74e-51 184
MS.gene20066.t1 AT5G62000 35.347 331 164 10 26 312 48 372 3.74e-51 184
MS.gene20066.t1 AT5G62000 35.347 331 164 10 26 312 48 372 3.74e-51 184
MS.gene20066.t1 AT5G62000 35.347 331 164 10 26 312 48 372 3.74e-51 184
MS.gene20066.t1 AT2G33860 34.700 317 165 8 33 311 54 366 4.31e-51 181
MS.gene20066.t1 AT2G46530 32.361 377 187 11 33 365 21 373 6.83e-50 178
MS.gene20066.t1 AT2G46530 32.361 377 187 11 33 365 42 394 8.84e-50 178
MS.gene20066.t1 AT3G61830 34.154 325 165 8 33 318 25 339 7.25e-49 175
MS.gene20066.t1 AT5G37020 44.019 209 109 5 107 309 31 237 3.30e-48 175
MS.gene20066.t1 AT3G61830 37.736 265 150 6 60 318 33 288 2.05e-46 168
MS.gene20066.t1 AT2G33860 40.191 209 120 3 107 311 2 209 8.94e-44 159
MS.gene20066.t1 AT1G35520 34.286 315 162 8 33 312 27 331 1.30e-43 160
MS.gene20066.t1 AT1G35240 33.968 315 163 8 33 312 27 331 2.78e-43 160
MS.gene20066.t1 AT1G34310 33.651 315 164 7 33 312 27 331 5.03e-43 159
MS.gene20066.t1 AT2G46530 35.821 268 147 7 106 365 36 286 1.71e-42 156
MS.gene20066.t1 AT1G34410 34.069 317 160 8 33 312 27 331 2.02e-42 157
MS.gene20066.t1 AT1G35540 33.651 315 164 8 33 312 27 331 2.95e-42 157
MS.gene20066.t1 AT1G34390 34.286 315 160 8 33 312 27 329 6.92e-42 156
MS.gene20066.t1 AT1G34170 30.088 339 184 9 14 312 6 331 2.44e-37 142
MS.gene20066.t1 AT1G34170 28.614 339 163 9 14 312 6 305 1.09e-31 126
MS.gene20066.t1 AT1G34170 28.448 348 168 10 14 319 6 314 3.20e-31 125
MS.gene20066.t1 AT1G43950 32.524 206 97 6 33 206 27 222 1.95e-24 100
MS.gene20066.t1 AT2G46870 34.211 114 69 2 99 207 27 139 1.60e-11 65.5

Find 92 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATTCGCATTGGTTCTT+AGG 0.221784 7.2:-11042252 None:intergenic
CATCAACGTGTCTGAAATTA+AGG 0.241218 7.2:+11040006 MS.gene20066:CDS
GCATTTCAGGCATGTTTATA+GGG 0.274751 7.2:+11040195 MS.gene20066:CDS
TTTGTGAAAACTTCTTTAAT+TGG 0.290026 7.2:+11040631 MS.gene20066:CDS
GGCATTTCAGGCATGTTTAT+AGG 0.293252 7.2:+11040194 MS.gene20066:CDS
CAGTGTCAATTTGTATTGTT+TGG 0.297437 7.2:-11042131 None:intergenic
CGGAACTGTTGTTTCTGTTC+AGG 0.298883 7.2:+11040741 MS.gene20066:CDS
TCGAGGATACGTTGGTTTAT+CGG 0.313865 7.2:+11040721 MS.gene20066:CDS
ATGGTGAAAAGTGGCATTTC+AGG 0.316984 7.2:+11040182 MS.gene20066:CDS
CAGTTATGGCATGCCATTGC+AGG 0.355789 7.2:+11039740 MS.gene20066:CDS
AAATGTTATTAAACGGTTGT+TGG 0.359013 7.2:-11041960 None:intergenic
TTGGAATTCGGAGGGCTAAA+AGG 0.363443 7.2:+11040332 MS.gene20066:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7.2:+11039983 MS.gene20066:CDS
AGTGACAAGAAACTTGCTTC+TGG 0.385156 7.2:+11040265 MS.gene20066:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7.2:-11039959 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.392584 7.2:+11040226 MS.gene20066:CDS
AGTTTCTTGTCACTGACATA+TGG 0.394738 7.2:-11040256 None:intergenic
TACACAATCTTTAGAGAAAC+CGG 0.394786 7.2:+11042074 MS.gene20066:CDS
AGAAGTCTCCACAGAGAATC+AGG 0.397029 7.2:-11040781 None:intergenic
TTGGAATAGCACTTCAGATT+AGG 0.401876 7.2:+11040650 MS.gene20066:CDS
GTGAACTTAATGTTGGAATT+CGG 0.402297 7.2:+11040320 MS.gene20066:CDS
AGGTGCAACTGAGATGAATA+TGG 0.406992 7.2:+11039673 MS.gene20066:CDS
ATTTGAAGCTATAAGATATA+TGG 0.407554 7.2:+11039892 MS.gene20066:intron
GCCATCTTGAACCTCATTCC+AGG 0.409391 7.2:-11040679 None:intergenic
TTAAACGGTTGTTGGAAACT+AGG 0.416552 7.2:-11041952 None:intergenic
AAGATATGTGAGTTAACTTC+TGG 0.418161 7.2:-11039779 None:intergenic
ATTGTAGAAATGTTATTAAA+CGG 0.422394 7.2:-11041967 None:intergenic
TATCTTCTTCTACTTCCCTC+AGG 0.423741 7.2:+11039796 MS.gene20066:CDS
GTGACAAGAAACTTGCTTCT+GGG 0.423889 7.2:+11040266 MS.gene20066:CDS
CTGCCAAAGTTTATTCGCAT+TGG 0.435780 7.2:-11042260 None:intergenic
TTCTCTGTGGAGACTTCTCC+AGG 0.441260 7.2:+11040786 MS.gene20066:CDS
AAAAGAAAAGGTTGCAATCC+AGG 0.441464 7.2:+11039653 MS.gene20066:CDS
CATCATTATCAAAACTAACT+TGG 0.449861 7.2:-11039973 None:intergenic
GTTGTCAACAAATGCCTCTT+CGG 0.456311 7.2:-11040223 None:intergenic
TGGTGCGGCTTTGCATGATC+CGG 0.483206 7.2:-11042093 None:intergenic
CGATGAGTCCTCAGTTTCAA+TGG 0.489284 7.2:-11040701 None:intergenic
GGATAATAAACCACATCAAA+CGG 0.491751 7.2:-11040586 None:intergenic
CTTCAGATTAGGTGGTGTCC+TGG 0.494054 7.2:+11040661 MS.gene20066:CDS
GAAAACAGTGAACTTAATGT+TGG 0.494744 7.2:+11040313 MS.gene20066:CDS
TTCAGGCTGCTGATCAGTCA+TGG 0.498485 7.2:+11040758 MS.gene20066:CDS
GTGGTTTATTATCCTCGGTC+GGG 0.504235 7.2:+11040595 MS.gene20066:CDS
TTGATGTGGTTTATTATCCT+CGG 0.506306 7.2:+11040590 MS.gene20066:CDS
CATCAGAGGAACGTGTCGGC+AGG 0.508244 7.2:-11042212 None:intergenic
GTTATTGAAGCAGCAAGACT+TGG 0.509000 7.2:+11040550 MS.gene20066:CDS
GAAACGTTCTCACTGGTGTT+CGG 0.522985 7.2:-11042027 None:intergenic
TTGTCTGATCTTCATCTACA+AGG 0.524873 7.2:+11042189 MS.gene20066:CDS
ATATTCATCTCAGTTGCACC+TGG 0.525870 7.2:-11039671 None:intergenic
TTGGGATAGATGTCCTGAAA+AGG 0.529804 7.2:-11040151 None:intergenic
TTGCACCATTCCTCCTGCAA+TGG 0.544601 7.2:-11039753 None:intergenic
TGTGGTTTATTATCCTCGGT+CGG 0.545089 7.2:+11040594 MS.gene20066:CDS
TGACAAGAAACTTGCTTCTG+GGG 0.545499 7.2:+11040267 MS.gene20066:CDS
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7.2:+11040346 MS.gene20066:CDS
CATTTCAGGCATGTTTATAG+GGG 0.556177 7.2:+11040196 MS.gene20066:CDS
AGCGTTTCGGCACAATATCT+AGG 0.559188 7.2:-11040097 None:intergenic
ATCTTCTTCTACTTCCCTCA+GGG 0.561691 7.2:+11039797 MS.gene20066:CDS
GGCATTTGTTGACAACTGGA+TGG 0.569244 7.2:+11040230 MS.gene20066:CDS
TTAGGTGGTGTCCTGGAATG+AGG 0.569864 7.2:+11040668 MS.gene20066:CDS
AACTTAATGTTGGAATTCGG+AGG 0.572730 7.2:+11040323 MS.gene20066:CDS
AGGATGTACATGGTGAAAAG+TGG 0.579569 7.2:+11040173 MS.gene20066:CDS
AGAGTGTGGACCCTCAGTTA+TGG 0.579965 7.2:+11039726 MS.gene20066:CDS
GAATAGCACTTCAGATTAGG+TGG 0.583504 7.2:+11040653 MS.gene20066:CDS
TAATATGCAGCCGTTTGATG+TGG 0.585844 7.2:+11040576 MS.gene20066:CDS
GAGTTATTAGTGAGAGTCAT+CGG 0.590982 7.2:-11041991 None:intergenic
TCTGATGCAAACACTGGTGG+TGG 0.592766 7.2:+11040064 MS.gene20066:CDS
ATCTATCCCAAGGATGTACA+TGG 0.592936 7.2:+11040163 MS.gene20066:CDS
CGAGCACGAAACGTTCTCAC+TGG 0.593447 7.2:-11042034 None:intergenic
GGATAGATGTCCTGAAAAGG+AGG 0.594077 7.2:-11040148 None:intergenic
GCATGCCATTGCAGGAGGAA+TGG 0.598837 7.2:+11039748 MS.gene20066:CDS
CTAATAACTCGGCATTGCAA+AGG 0.603976 7.2:+11042004 MS.gene20066:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7.2:+11039930 MS.gene20066:CDS
TCCTGGAATGAGGTTCAAGA+TGG 0.614384 7.2:+11040678 MS.gene20066:CDS
TTTATAGGGGCACGCCGAAG+AGG 0.616360 7.2:+11040209 MS.gene20066:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.616878 7.2:-11040053 None:intergenic
CCACTCAAATCTCTCATCAG+AGG 0.617187 7.2:-11042226 None:intergenic
CATGCTAGGCGTGACCCTGA+GGG 0.624725 7.2:-11039811 None:intergenic
ACACAATCTGATGCAAACAC+TGG 0.627018 7.2:+11040058 MS.gene20066:CDS
ACTTAATGTTGGAATTCGGA+GGG 0.629032 7.2:+11040324 MS.gene20066:CDS
GATGACTCTCACTAATAACT+CGG 0.629448 7.2:+11041993 MS.gene20066:CDS
TTATGGCATGCCATTGCAGG+AGG 0.637029 7.2:+11039743 MS.gene20066:CDS
AGGACTCATCGAGGATACGT+TGG 0.639611 7.2:+11040713 MS.gene20066:CDS
CTCTCATCAGAGGAACGTGT+CGG 0.642906 7.2:-11042216 None:intergenic
CAAGATGGCCATTGAAACTG+AGG 0.643200 7.2:+11040693 MS.gene20066:CDS
CAATGGCATGCCATAACTGA+GGG 0.647143 7.2:-11039736 None:intergenic
GCAATGGCATGCCATAACTG+AGG 0.666738 7.2:-11039737 None:intergenic
AGTCATGGCCTGATTCTCTG+TGG 0.672958 7.2:+11040773 MS.gene20066:CDS
CAAACAATACAAATTGACAC+TGG 0.679693 7.2:+11042132 MS.gene20066:CDS
CCTCTGATGAGAGATTTGAG+TGG 0.684336 7.2:+11042226 MS.gene20066:CDS
AACTCAGGAGTACCCGACCG+AGG 0.690896 7.2:-11040607 None:intergenic
GATAGATGTCCTGAAAAGGA+GGG 0.691897 7.2:-11040147 None:intergenic
TTGAAACTGAGGACTCATCG+AGG 0.724347 7.2:+11040704 MS.gene20066:CDS
CAATCTGATGCAAACACTGG+TGG 0.725224 7.2:+11040061 MS.gene20066:CDS
TTAGCTGAATAGTCCAAACG+AGG 0.756003 7.2:-11040124 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGTAGAAATGTTATTAAA+CGG - chr7.2:11041970-11041989 None:intergenic 15.0%
!! GAGATTAATAACATTAAATA+CGG + chr7.2:11040877-11040896 MS.gene20066:intron 15.0%
!! TGCAATAATATTATACAAAA+TGG - chr7.2:11041255-11041274 None:intergenic 15.0%
!!! AAATGAAAATTTGGAATATT+AGG - chr7.2:11041835-11041854 None:intergenic 15.0%
!! AAAAAAGTTGTCATATTTGA+CGG - chr7.2:11041113-11041132 None:intergenic 20.0%
!! AAAAGGAAAAACTTCTTTAA+AGG - chr7.2:11041218-11041237 None:intergenic 20.0%
!! AAAGGAAAAACTTCTTTAAA+GGG - chr7.2:11041217-11041236 None:intergenic 20.0%
!! AAATTTATGAAAATCTGGTA+AGG - chr7.2:11041914-11041933 None:intergenic 20.0%
!! AATGGAAATTTATGAAAATC+TGG - chr7.2:11041919-11041938 None:intergenic 20.0%
!! TTTGTGAAAACTTCTTTAAT+TGG + chr7.2:11040631-11040650 MS.gene20066:CDS 20.0%
!!! ATTTGAAGCTATAAGATATA+TGG + chr7.2:11039892-11039911 MS.gene20066:intron 20.0%
!!! GATTTTCATAAATTTCCATT+AGG + chr7.2:11041919-11041938 MS.gene20066:intron 20.0%
! AAACTTCGAAGAAATAAGAA+AGG + chr7.2:11040469-11040488 MS.gene20066:intron 25.0%
! AAATGTTATTAAACGGTTGT+TGG - chr7.2:11041963-11041982 None:intergenic 25.0%
! ATAATAAACATGTCTATACC+TGG - chr7.2:11040807-11040826 None:intergenic 25.0%
! CATCATTATCAAAACTAACT+TGG - chr7.2:11039976-11039995 None:intergenic 25.0%
! CATCCAAGTTAAATATGTTA+AGG - chr7.2:11041408-11041427 None:intergenic 25.0%
! CTAACTTGGTTAATATTCAT+AGG - chr7.2:11039962-11039981 None:intergenic 25.0%
! GTTGATGTGAATATTGTTTA+TGG + chr7.2:11041444-11041463 MS.gene20066:intron 25.0%
! TATGATGTATTACTGAGAAA+TGG + chr7.2:11041168-11041187 MS.gene20066:intron 25.0%
! TCTCGCAAATTAATTCTAAA+GGG - chr7.2:11040835-11040854 None:intergenic 25.0%
! TTCTCGCAAATTAATTCTAA+AGG - chr7.2:11040836-11040855 None:intergenic 25.0%
!! AAATTTGGAATATTAGGACT+TGG - chr7.2:11041829-11041848 None:intergenic 25.0%
!! CGGTGAAGTTATTTATATTT+TGG + chr7.2:11040897-11040916 MS.gene20066:intron 25.0%
!! TTTTAATCAGTACCATACAT+TGG + chr7.2:11041309-11041328 MS.gene20066:intron 25.0%
!! TTTTACCAAATTCTCATGTT+AGG - chr7.2:11041341-11041360 None:intergenic 25.0%
!!! ATGATTAGTCATTTTCTTCT+CGG - chr7.2:11042169-11042188 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG + chr7.2:11039974-11039993 MS.gene20066:CDS 25.0%
!!! TTCACATTTTTAAGTAACTC+AGG - chr7.2:11041652-11041671 None:intergenic 25.0%
AAGATATGTGAGTTAACTTC+TGG - chr7.2:11039782-11039801 None:intergenic 30.0%
AATCTACATGGAATGAAAGA+TGG - chr7.2:11039875-11039894 None:intergenic 30.0%
CAAACAATACAAATTGACAC+TGG + chr7.2:11042132-11042151 MS.gene20066:CDS 30.0%
CAGTGTCAATTTGTATTGTT+TGG - chr7.2:11042134-11042153 None:intergenic 30.0%
CGAAGAAATAAGAAAGGAAA+TGG + chr7.2:11040475-11040494 MS.gene20066:intron 30.0%
CTTATAGCTTCAAATCTACA+TGG - chr7.2:11039887-11039906 None:intergenic 30.0%
GAAAACAGTGAACTTAATGT+TGG + chr7.2:11040313-11040332 MS.gene20066:CDS 30.0%
GGATAATAAACCACATCAAA+CGG - chr7.2:11040589-11040608 None:intergenic 30.0%
GTGAACTTAATGTTGGAATT+CGG + chr7.2:11040320-11040339 MS.gene20066:CDS 30.0%
TACAAAATGTCATCAAAGAG+TGG + chr7.2:11041001-11041020 MS.gene20066:intron 30.0%
TAGTACTAACGAATTTCACA+AGG + chr7.2:11041533-11041552 MS.gene20066:intron 30.0%
TTGATGTGGTTTATTATCCT+CGG + chr7.2:11040590-11040609 MS.gene20066:CDS 30.0%
! GAAAAGTTGGCATTGAAAAT+TGG - chr7.2:11041795-11041814 None:intergenic 30.0%
! GAAGTTTTCACAAAAAACTC+AGG - chr7.2:11040625-11040644 None:intergenic 30.0%
! GTTTCGGGTAAATGAAAATT+TGG - chr7.2:11041844-11041863 None:intergenic 30.0%
! TACACAATCTTTAGAGAAAC+CGG + chr7.2:11042074-11042093 MS.gene20066:CDS 30.0%
! TGGAATGAAAGATGGAATTT+TGG - chr7.2:11039867-11039886 None:intergenic 30.0%
!! AATGGATTACTAATAAGCGA+TGG + chr7.2:11040493-11040512 MS.gene20066:intron 30.0%
!! CTTCTGATATCATGCTTTTT+AGG + chr7.2:11041612-11041631 MS.gene20066:intron 30.0%
AAAAGAAAAGGTTGCAATCC+AGG + chr7.2:11039653-11039672 MS.gene20066:CDS 35.0%
AAAGCTATAGCACTATTGCA+TGG + chr7.2:11041031-11041050 MS.gene20066:intron 35.0%
AACTTAATGTTGGAATTCGG+AGG + chr7.2:11040323-11040342 MS.gene20066:CDS 35.0%
ACTAATAAGCGATGGAATGA+TGG + chr7.2:11040501-11040520 MS.gene20066:intron 35.0%
ACTTAATGTTGGAATTCGGA+GGG + chr7.2:11040324-11040343 MS.gene20066:CDS 35.0%
AGCTTCCTAACATGAGAATT+TGG + chr7.2:11041333-11041352 MS.gene20066:intron 35.0%
AGTTTCTTGTCACTGACATA+TGG - chr7.2:11040259-11040278 None:intergenic 35.0%
ATGAAGTGTATGCAAAACTC+AGG + chr7.2:11039930-11039949 MS.gene20066:CDS 35.0%
ATTGAAAATTGGCTGTCAAG+TGG - chr7.2:11041784-11041803 None:intergenic 35.0%
CATTTCAGGCATGTTTATAG+GGG + chr7.2:11040196-11040215 MS.gene20066:CDS 35.0%
CTAATAAGCGATGGAATGAT+GGG + chr7.2:11040502-11040521 MS.gene20066:intron 35.0%
GAAAAATGTGAACAAGAGTG+TGG + chr7.2:11039712-11039731 MS.gene20066:CDS 35.0%
GAGTTATTAGTGAGAGTCAT+CGG - chr7.2:11041994-11042013 None:intergenic 35.0%
GATGACTCTCACTAATAACT+CGG + chr7.2:11041993-11042012 MS.gene20066:CDS 35.0%
GATGTATTACTGAGAAATGG+TGG + chr7.2:11041171-11041190 MS.gene20066:intron 35.0%
GCATTTCAGGCATGTTTATA+GGG + chr7.2:11040195-11040214 MS.gene20066:CDS 35.0%
GCTAAAAGGCGAAATAATGT+TGG + chr7.2:11040346-11040365 MS.gene20066:CDS 35.0%
GGGCCTTAACATATTTAACT+TGG + chr7.2:11041402-11041421 MS.gene20066:intron 35.0%
TAAATATGTTAAGGCCCTGA+GGG - chr7.2:11041399-11041418 None:intergenic 35.0%
TCTTCATTATGTATCCCTCA+GGG + chr7.2:11041382-11041401 MS.gene20066:intron 35.0%
TGGAGCTACATCATACAAAA+AGG - chr7.2:11041235-11041254 None:intergenic 35.0%
TTAAACGGTTGTTGGAAACT+AGG - chr7.2:11041955-11041974 None:intergenic 35.0%
TTAAATATGTTAAGGCCCTG+AGG - chr7.2:11041400-11041419 None:intergenic 35.0%
TTCTTCATTATGTATCCCTC+AGG + chr7.2:11041381-11041400 MS.gene20066:intron 35.0%
TTGAAAATTGGCTGTCAAGT+GGG - chr7.2:11041783-11041802 None:intergenic 35.0%
TTGGAATAGCACTTCAGATT+AGG + chr7.2:11040650-11040669 MS.gene20066:CDS 35.0%
TTGGAATATTAGGACTTGGA+AGG - chr7.2:11041825-11041844 None:intergenic 35.0%
TTGTCTGATCTTCATCTACA+AGG + chr7.2:11042189-11042208 MS.gene20066:CDS 35.0%
! CATCAACGTGTCTGAAATTA+AGG + chr7.2:11040006-11040025 MS.gene20066:CDS 35.0%
! GAGTTTTGCATACACTTCAT+CGG - chr7.2:11039930-11039949 None:intergenic 35.0%
! TTTTCACCATGTACATCCTT+GGG - chr7.2:11040172-11040191 None:intergenic 35.0%
!! AACTTGAAAGCATTCTGATC+TGG - chr7.2:11041291-11041310 None:intergenic 35.0%
!! TGGAAATTTGGTAGTGGAAT+TGG + chr7.2:11040388-11040407 MS.gene20066:intron 35.0%
!! TTTGATAATGATGGTGTTGC+TGG + chr7.2:11039983-11040002 MS.gene20066:CDS 35.0%
AACTATGGAAATCCTCCGTA+AGG - chr7.2:11040430-11040449 None:intergenic 40.0%
AATACCAAAATGACCATGCC+TGG - chr7.2:11041890-11041909 None:intergenic 40.0%
AATCTCAATTTCGTCCTTGG+CGG - chr7.2:11041742-11041761 None:intergenic 40.0%
ACACAATCTGATGCAAACAC+TGG + chr7.2:11040058-11040077 MS.gene20066:CDS 40.0%
AGGATGTACATGGTGAAAAG+TGG + chr7.2:11040173-11040192 MS.gene20066:CDS 40.0%
AGGTGCAACTGAGATGAATA+TGG + chr7.2:11039673-11039692 MS.gene20066:CDS 40.0%
ATATTCATCTCAGTTGCACC+TGG - chr7.2:11039674-11039693 None:intergenic 40.0%
ATCTATCCCAAGGATGTACA+TGG + chr7.2:11040163-11040182 MS.gene20066:CDS 40.0%
ATCTTCTTCTACTTCCCTCA+GGG + chr7.2:11039797-11039816 MS.gene20066:CDS 40.0%
ATGGTGAAAAGTGGCATTTC+AGG + chr7.2:11040182-11040201 MS.gene20066:CDS 40.0%
ATGTGAAAAGAGTGAATCCG+TGG + chr7.2:11041665-11041684 MS.gene20066:intron 40.0%
CTAATAACTCGGCATTGCAA+AGG + chr7.2:11042004-11042023 MS.gene20066:CDS 40.0%
CTAGGCTGAAATAGACCTAA+TGG - chr7.2:11041937-11041956 None:intergenic 40.0%
GAATAGCACTTCAGATTAGG+TGG + chr7.2:11040653-11040672 MS.gene20066:CDS 40.0%
GATACTCTTTCAACTTGCCA+CGG - chr7.2:11041685-11041704 None:intergenic 40.0%
GATAGATGTCCTGAAAAGGA+GGG - chr7.2:11040150-11040169 None:intergenic 40.0%
GGAAGGTTGTTTGGAAAAGT+TGG - chr7.2:11041808-11041827 None:intergenic 40.0%
GGCATTTCAGGCATGTTTAT+AGG + chr7.2:11040194-11040213 MS.gene20066:CDS 40.0%
GGTAATCTCAATTTCGTCCT+TGG - chr7.2:11041745-11041764 None:intergenic 40.0%
GTTATTGAAGCAGCAAGACT+TGG + chr7.2:11040550-11040569 MS.gene20066:CDS 40.0%
GTTGTCAACAAATGCCTCTT+CGG - chr7.2:11040226-11040245 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG - chr7.2:11040056-11040075 None:intergenic 40.0%
TAATATGCAGCCGTTTGATG+TGG + chr7.2:11040576-11040595 MS.gene20066:CDS 40.0%
TATCTTCTTCTACTTCCCTC+AGG + chr7.2:11039796-11039815 MS.gene20066:CDS 40.0%
TGTCAATCTCAGATCGCAAA+AGG - chr7.2:11041078-11041097 None:intergenic 40.0%
TGTGGTTTATTATCCTCGGT+CGG + chr7.2:11040594-11040613 MS.gene20066:CDS 40.0%
TTAGCTGAATAGTCCAAACG+AGG - chr7.2:11040127-11040146 None:intergenic 40.0%
TTAGGACTTGGAAGGTTGTT+TGG - chr7.2:11041817-11041836 None:intergenic 40.0%
TTGGAGTCAATCCTTTGTCA+GGG + chr7.2:11040365-11040384 MS.gene20066:intron 40.0%
TTGGGATAGATGTCCTGAAA+AGG - chr7.2:11040154-11040173 None:intergenic 40.0%
! AGTGACAAGAAACTTGCTTC+TGG + chr7.2:11040265-11040284 MS.gene20066:CDS 40.0%
! CGGAGGATTTCCATAGTTTT+CGG + chr7.2:11040432-11040451 MS.gene20066:intron 40.0%
! CTTTTCACCATGTACATCCT+TGG - chr7.2:11040173-11040192 None:intergenic 40.0%
! GGAGGATTTCCATAGTTTTC+GGG + chr7.2:11040433-11040452 MS.gene20066:intron 40.0%
! GTCATATTTGACGGACCAAA+CGG - chr7.2:11041104-11041123 None:intergenic 40.0%
! GTGACAAGAAACTTGCTTCT+GGG + chr7.2:11040266-11040285 MS.gene20066:CDS 40.0%
! TGACAAGAAACTTGCTTCTG+GGG + chr7.2:11040267-11040286 MS.gene20066:CDS 40.0%
! TGGTGTGTTTTCATTCTGCT+GGG + chr7.2:11041191-11041210 MS.gene20066:intron 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG + chr7.2:11040226-11040245 MS.gene20066:CDS 40.0%
!! ATTTCCATAGTTTTCGGGAG+AGG + chr7.2:11040438-11040457 MS.gene20066:intron 40.0%
!! CAAACGAGGAAAAAGCGTTT+CGG - chr7.2:11040113-11040132 None:intergenic 40.0%
!! GAGTAAGCACTGAAATTCAC+CGG - chr7.2:11039845-11039864 None:intergenic 40.0%
!! TCGAGGATACGTTGGTTTAT+CGG + chr7.2:11040721-11040740 MS.gene20066:CDS 40.0%
!! TTTTCAGGACATCTATCCCA+AGG + chr7.2:11040153-11040172 MS.gene20066:CDS 40.0%
AGAAGTCTCCACAGAGAATC+AGG - chr7.2:11040784-11040803 None:intergenic 45.0%
AGCGTTTCGGCACAATATCT+AGG - chr7.2:11040100-11040119 None:intergenic 45.0%
AGTGGGAAATTTGGGAGTTG+AGG - chr7.2:11041766-11041785 None:intergenic 45.0%
ATTTGTCCTGCACCACCTTA+CGG + chr7.2:11040412-11040431 MS.gene20066:intron 45.0%
CAAGATGGCCATTGAAACTG+AGG + chr7.2:11040693-11040712 MS.gene20066:CDS 45.0%
CAATCTGATGCAAACACTGG+TGG + chr7.2:11040061-11040080 MS.gene20066:CDS 45.0%
CAATGGCATGCCATAACTGA+GGG - chr7.2:11039739-11039758 None:intergenic 45.0%
CCAAATTTCCACCCTGACAA+AGG - chr7.2:11040379-11040398 None:intergenic 45.0%
CCACTCAAATCTCTCATCAG+AGG - chr7.2:11042229-11042248 None:intergenic 45.0%
CCTCTGATGAGAGATTTGAG+TGG + chr7.2:11042226-11042245 MS.gene20066:CDS 45.0%
CCTTTGTCAGGGTGGAAATT+TGG + chr7.2:11040376-11040395 MS.gene20066:intron 45.0%
CGATGAGTCCTCAGTTTCAA+TGG - chr7.2:11040704-11040723 None:intergenic 45.0%
CTGAGATTGACAACACCGTT+TGG + chr7.2:11041086-11041105 MS.gene20066:intron 45.0%
CTGTCAAATAGCGGCTATAG+TGG + chr7.2:11040926-11040945 MS.gene20066:intron 45.0%
GAAACGTTCTCACTGGTGTT+CGG - chr7.2:11042030-11042049 None:intergenic 45.0%
GCTATGGTTCTCTGGTATAG+TGG + chr7.2:11040950-11040969 MS.gene20066:intron 45.0%
GGATAGATGTCCTGAAAAGG+AGG - chr7.2:11040151-11040170 None:intergenic 45.0%
GGCTGTCAAGTGGGAAATTT+GGG - chr7.2:11041774-11041793 None:intergenic 45.0%
GTGGTTTATTATCCTCGGTC+GGG + chr7.2:11040595-11040614 MS.gene20066:CDS 45.0%
GTTAGGAAGCTGCCAATGTA+TGG - chr7.2:11041324-11041343 None:intergenic 45.0%
GTTGGAGTCAATCCTTTGTC+AGG + chr7.2:11040364-11040383 MS.gene20066:intron 45.0%
TATGGAAATCCTCCGTAAGG+TGG - chr7.2:11040427-11040446 None:intergenic 45.0%
TCAGGGTGGAAATTTGGTAG+TGG + chr7.2:11040382-11040401 MS.gene20066:intron 45.0%
TCCTGGAATGAGGTTCAAGA+TGG + chr7.2:11040678-11040697 MS.gene20066:CDS 45.0%
TCTTCCTCTCCCGAAAACTA+TGG - chr7.2:11040445-11040464 None:intergenic 45.0%
TGGCTGTCAAGTGGGAAATT+TGG - chr7.2:11041775-11041794 None:intergenic 45.0%
TGGTCAACGCTGTCAAATAG+CGG + chr7.2:11040917-11040936 MS.gene20066:intron 45.0%
TTGAAACTGAGGACTCATCG+AGG + chr7.2:11040704-11040723 MS.gene20066:CDS 45.0%
TTGGAATTCGGAGGGCTAAA+AGG + chr7.2:11040332-11040351 MS.gene20066:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG + chr7.2:11040230-11040249 MS.gene20066:CDS 45.0%
! GTGGTGTGTTTTCATTCTGC+TGG + chr7.2:11041190-11041209 MS.gene20066:intron 45.0%
! TTCAGCTAACCCTCCTTTTC+AGG + chr7.2:11040138-11040157 MS.gene20066:CDS 45.0%
!! AAGCGATGGAATGATGGGTA+GGG + chr7.2:11040507-11040526 MS.gene20066:intron 45.0%
!! ATAGTGGTGCTATGGTTCTC+TGG + chr7.2:11040942-11040961 MS.gene20066:intron 45.0%
!! CGGAACTGTTGTTTCTGTTC+AGG + chr7.2:11040741-11040760 MS.gene20066:CDS 45.0%
!! TAAGCGATGGAATGATGGGT+AGG + chr7.2:11040506-11040525 MS.gene20066:intron 45.0%
!!! CGAAACGCTTTTTCCTCGTT+TGG + chr7.2:11040111-11040130 MS.gene20066:CDS 45.0%
AAAGGGGAAAGAGGGATCGA+AGG - chr7.2:11041715-11041734 None:intergenic 50.0%
AGAGTGTGGACCCTCAGTTA+TGG + chr7.2:11039726-11039745 MS.gene20066:CDS 50.0%
AGGACTCATCGAGGATACGT+TGG + chr7.2:11040713-11040732 MS.gene20066:CDS 50.0%
AGTCATGGCCTGATTCTCTG+TGG + chr7.2:11040773-11040792 MS.gene20066:CDS 50.0%
CAGTTATGGCATGCCATTGC+AGG + chr7.2:11039740-11039759 MS.gene20066:CDS 50.0%
CATGCCAGCAGGAGTTGTTT+CGG - chr7.2:11041860-11041879 None:intergenic 50.0%
CTCTCATCAGAGGAACGTGT+CGG - chr7.2:11042219-11042238 None:intergenic 50.0%
CTTCAGATTAGGTGGTGTCC+TGG + chr7.2:11040661-11040680 MS.gene20066:CDS 50.0%
GAGTCAATCCTTTGTCAGGG+TGG + chr7.2:11040368-11040387 MS.gene20066:intron 50.0%
GCAATGGCATGCCATAACTG+AGG - chr7.2:11039740-11039759 None:intergenic 50.0%
GCCATCTTGAACCTCATTCC+AGG - chr7.2:11040682-11040701 None:intergenic 50.0%
GCGGTATGAAAGGGGAAAGA+GGG - chr7.2:11041723-11041742 None:intergenic 50.0%
TCGTCCTTGGCGGTATGAAA+GGG - chr7.2:11041732-11041751 None:intergenic 50.0%
TCTGATGCAAACACTGGTGG+TGG + chr7.2:11040064-11040083 MS.gene20066:CDS 50.0%
TTACCCGAAACAACTCCTGC+TGG + chr7.2:11041853-11041872 MS.gene20066:intron 50.0%
TTAGGTGGTGTCCTGGAATG+AGG + chr7.2:11040668-11040687 MS.gene20066:CDS 50.0%
TTATGGCATGCCATTGCAGG+AGG + chr7.2:11039743-11039762 MS.gene20066:CDS 50.0%
TTCAGGCTGCTGATCAGTCA+TGG + chr7.2:11040758-11040777 MS.gene20066:CDS 50.0%
TTCGTCCTTGGCGGTATGAA+AGG - chr7.2:11041733-11041752 None:intergenic 50.0%
TTCTCTGTGGAGACTTCTCC+AGG + chr7.2:11040786-11040805 MS.gene20066:CDS 50.0%
TTGCACCATTCCTCCTGCAA+TGG - chr7.2:11039756-11039775 None:intergenic 50.0%
TTTCCCCTTTCATACCGCCA+AGG + chr7.2:11041725-11041744 MS.gene20066:intron 50.0%
! ATGCCAGCAGGAGTTGTTTC+GGG - chr7.2:11041859-11041878 None:intergenic 50.0%
! TAGCGGCTATAGTGGTGCTA+TGG + chr7.2:11040934-11040953 MS.gene20066:intron 50.0%
! TTTGGCCAAAAAGCACGAGC+TGG - chr7.2:11042116-11042135 None:intergenic 50.0%
!! AGCGATGGAATGATGGGTAG+GGG + chr7.2:11040508-11040527 MS.gene20066:intron 50.0%
AACAACTCCTGCTGGCATGC+AGG + chr7.2:11041861-11041880 MS.gene20066:intron 55.0%
AATCCTCCGTAAGGTGGTGC+AGG - chr7.2:11040421-11040440 None:intergenic 55.0%
ACAACTCCTGCTGGCATGCA+GGG + chr7.2:11041862-11041881 MS.gene20066:intron 55.0%
CGAGCACGAAACGTTCTCAC+TGG - chr7.2:11042037-11042056 None:intergenic 55.0%
CGCCTAGCATGCATGTGAAC+CGG + chr7.2:11039823-11039842 MS.gene20066:intron 55.0%
CGTCCTTGGCGGTATGAAAG+GGG - chr7.2:11041731-11041750 None:intergenic 55.0%
GCATGCCATTGCAGGAGGAA+TGG + chr7.2:11039748-11039767 MS.gene20066:CDS 55.0%
GGCGGTATGAAAGGGGAAAG+AGG - chr7.2:11041724-11041743 None:intergenic 55.0%
TGGTGCGGCTTTGCATGATC+CGG - chr7.2:11042096-11042115 None:intergenic 55.0%
! CCAAAAAGCACGAGCTGGTG+CGG - chr7.2:11042111-11042130 None:intergenic 55.0%
! GGAGCCAGGCATGGTCATTT+TGG + chr7.2:11041883-11041902 MS.gene20066:intron 55.0%
! TTTATAGGGGCACGCCGAAG+AGG + chr7.2:11040209-11040228 MS.gene20066:CDS 55.0%
!! CACCGGTTCACATGCATGCT+AGG - chr7.2:11039828-11039847 None:intergenic 55.0%
!! GCGATGGAATGATGGGTAGG+GGG + chr7.2:11040509-11040528 MS.gene20066:intron 55.0%
!! TGGAATGATGGGTAGGGGGA+AGG + chr7.2:11040513-11040532 MS.gene20066:intron 55.0%
ATGGGTAGGGGGAAGGCGAA+AGG + chr7.2:11040520-11040539 MS.gene20066:intron 60.0%
CATGCTAGGCGTGACCCTGA+GGG - chr7.2:11039814-11039833 None:intergenic 60.0%
TGTCCTGCACCACCTTACGG+AGG + chr7.2:11040415-11040434 MS.gene20066:intron 60.0%
! CATCAGAGGAACGTGTCGGC+AGG - chr7.2:11042215-11042234 None:intergenic 60.0%
! CCGCACCAGCTCGTGCTTTT+TGG + chr7.2:11042108-11042127 MS.gene20066:CDS 60.0%
!! AACTCAGGAGTACCCGACCG+AGG - chr7.2:11040610-11040629 None:intergenic 60.0%
GCATGCTAGGCGTGACCCTG+AGG - chr7.2:11039815-11039834 None:intergenic 65.0%
CTGCTGGCATGCAGGGAGCC+AGG + chr7.2:11041869-11041888 MS.gene20066:intron 70.0%
CTGGCTCCCTGCATGCCAGC+AGG - chr7.2:11041871-11041890 None:intergenic 70.0%
GGCATGCAGGGAGCCAGGCA+TGG + chr7.2:11041874-11041893 MS.gene20066:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 11039644 11042272 11039644 ID=MS.gene20066
chr7.2 mRNA 11039644 11042272 11039644 ID=MS.gene20066.t1;Parent=MS.gene20066
chr7.2 exon 11039644 11039818 11039644 ID=MS.gene20066.t1.exon1;Parent=MS.gene20066.t1
chr7.2 CDS 11039644 11039818 11039644 ID=cds.MS.gene20066.t1;Parent=MS.gene20066.t1
chr7.2 exon 11039900 11040380 11039900 ID=MS.gene20066.t1.exon2;Parent=MS.gene20066.t1
chr7.2 CDS 11039900 11040380 11039900 ID=cds.MS.gene20066.t1;Parent=MS.gene20066.t1
chr7.2 exon 11040528 11040807 11040528 ID=MS.gene20066.t1.exon3;Parent=MS.gene20066.t1
chr7.2 CDS 11040528 11040807 11040528 ID=cds.MS.gene20066.t1;Parent=MS.gene20066.t1
chr7.2 exon 11041952 11042272 11041952 ID=MS.gene20066.t1.exon4;Parent=MS.gene20066.t1
chr7.2 CDS 11041952 11042272 11041952 ID=cds.MS.gene20066.t1;Parent=MS.gene20066.t1
Gene Sequence

>MS.gene20066

ATGAAAGAAAAAAGAAAAGGTTGCAATCCAGGTGCAACTGAGATGAATATGGAGTCAAAGAAGAAATTGAAAAATGTGAACAAGAGTGTGGACCCTCAGTTATGGCATGCCATTGCAGGAGGAATGGTGCAAATGCCAGAAGTTAACTCACATATCTTCTTCTACTTCCCTCAGGGTCACGCCTAGCATGCATGTGAACCGGTGAATTTCAGTGCTTACTCCAAAATTCCATCTTTCATTCCATGTAGATTTGAAGCTATAAGATATATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATTAAGGATAAACATCAATCTTTTGCGAAAACCTTGACACAATCTGATGCAAACACTGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCCGAAACGCTTTTTCCTCGTTTGGACTATTCAGCTAACCCTCCTTTTCAGGACATCTATCCCAAGGATGTACATGGTGAAAAGTGGCATTTCAGGCATGTTTATAGGGGCACGCCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCATATGTCAGTGACAAGAAACTTGCTTCTGGGGATTCAATTGTGTTTTTGAGATCTGAAAACAGTGAACTTAATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCAATCCTTTGTCAGGGTGGAAATTTGGTAGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATAGTTTTCGGGAGAGGAAGATAATAAACTTCGAAGAAATAAGAAAGGAAATGGATTACTAATAAGCGATGGAATGATGGGTAGGGGGAAGGCGAAAGGTCTAGAAGTTATTGAAGCAGCAAGACTTGGTACTAATATGCAGCCGTTTGATGTGGTTTATTATCCTCGGTCGGGTACTCCTGAGTTTTTTGTGAAAACTTCTTTAATTGGAATAGCACTTCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGGCCATTGAAACTGAGGACTCATCGAGGATACGTTGGTTTATCGGAACTGTTGTTTCTGTTCAGGCTGCTGATCAGTCATGGCCTGATTCTCTGTGGAGACTTCTCCAGGTATAGACATGTTTATTATATACTCCCTTTAGAATTAATTTGCGAGAACTTGTTTTATTGATGAATGTTGAGATTAATAACATTAAATACGGTGAAGTTATTTATATTTTGGTCAACGCTGTCAAATAGCGGCTATAGTGGTGCTATGGTTCTCTGGTATAGTGGAATTTGAACAAATCACTATTGTTTTTAGTACAAAATGTCATCAAAGAGTGGCTATAACAAAGCTATAGCACTATTGCATGGCAGAATTTGATCAAACAACTACCTTTTGCGATCTGAGATTGACAACACCGTTTGGTCCGTCAAATATGACAACTTTTTTGTTCGTATTTGAGTACAGAATAATATCTTTCAATCTATGATGTATTACTGAGAAATGGTGGTGTGTTTTCATTCTGCTGGGCCCTTTAAAGAAGTTTTTCCTTTTTGTATGATGTAGCTCCATTTTGTATAATATTATTGCAACATTTTCTTTTTCCAGATCAGAATGCTTTCAAGTTTTAATCAGTACCATACATTGGCAGCTTCCTAACATGAGAATTTGGTAAAAATCATATACATGCATTGCTATTCTTCATTATGTATCCCTCAGGGCCTTAACATATTTAACTTGGATGCATTTAAAGTTAGCAAGTTGATGTGAATATTGTTTATGGTAATATTGATACAGTAGAACACTGTTCTTACTGATAAAATTGTTTAAAGAAAATTAGATTAGTATTTAGTACTAACGAATTTCACAAGGTTCTTTTTATTGCTTATTACTATTACATTTTGAACTTTGTTTCAGCTGCGAATAATCTTCTGATATCATGCTTTTTAGGTTACATGAGATGAGCCTGAGTTACTTAAAAATGTGAAAAGAGTGAATCCGTGGCAAGTTGAAAGAGTATCGAACATGCCTTCGATCCCTCTTTCCCCTTTCATACCGCCAAGGACGAAATTGAGATTACCTCAACTCCCAAATTTCCCACTTGACAGCCAATTTTCAATGCCAACTTTTCCAAACAACCTTCCAAGTCCTAATATTCCAAATTTTCATTTACCCGAAACAACTCCTGCTGGCATGCAGGGAGCCAGGCATGGTCATTTTGGTATTTCCTTACCAGATTTTCATAAATTTCCATTAGGTCTATTTCAGCCTAGTTTCCAACAACCGTTTAATAACATTTCTACAATGCCGATGACTCTCACTAATAACTCGGCATTGCAAAGGCCGAACACCAGTGAGAACGTTTCGTGCTCGCGTTCGATATCAACTTCTACACAATCTTTAGAGAAACCGGATCATGCAAAGCCGCACCAGCTCGTGCTTTTTGGCCAAACAATACAAATTGACACTGGAAGTGAAACTTCCGAGAAGAAAATGACTAATCATTTGTCTGATCTTCATCTACAAGGCCTGCCGACACGTTCCTCTGATGAGAGATTTGAGTGGAATCCTAAGAACCAATGCGAATAA
Protein sequence

>MS.gene20066.t1

MKEKRKGCNPGATEMNMESKKKLKNVNKSVDPQLWHAIAGGMVQMPEVNSHIFFYFPQAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIKDKHQSFAKTLTQSDANTGGGFSCPRYCAETLFPRLDYSANPPFQDIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPYVSDKKLASGDSIVFLRSENSELNVGIRRAKRRNNVGVNPLGKAKGLEVIEAARLGTNMQPFDVVYYPRSGTPEFFVKTSLIGIALQIRWCPGMRFKMAIETEDSSRIRWFIGTVVSVQAADQSWPDSLWRLLQPSFQQPFNNISTMPMTLTNNSALQRPNTSENVSCSRSISTSTQSLEKPDHAKPHQLVLFGQTIQIDTGSETSEKKMTNHLSDLHLQGLPTRSSDERFEWNPKNQCE