AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20067

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20067.t1 MTR_7g101280 94.615 650 31 3 1 648 1 648 0.0 1282
MS.gene20067.t1 MTR_0041s0110 94.615 650 31 3 1 648 1 648 0.0 1282
MS.gene20067.t1 MTR_1g064430 51.237 687 239 16 22 628 31 701 0.0 616
MS.gene20067.t1 MTR_1g064430 51.237 687 239 16 22 628 18 688 0.0 616
MS.gene20067.t1 MTR_0041s0120 81.870 353 29 2 40 392 1 318 0.0 602
MS.gene20067.t1 MTR_0041s0120 81.818 110 18 2 490 599 310 417 9.58e-51 182
MS.gene20067.t1 MTR_7g101275 76.487 353 36 2 40 392 1 306 0.0 552
MS.gene20067.t1 MTR_7g101275 81.818 110 18 2 490 599 298 405 5.87e-51 182
MS.gene20067.t1 MTR_2g094570 52.228 561 230 12 11 556 44 581 0.0 545
MS.gene20067.t1 MTR_2g094570 52.737 548 224 11 21 556 1 525 0.0 541
MS.gene20067.t1 MTR_2g094570 52.737 548 224 11 21 556 1 525 0.0 540
MS.gene20067.t1 MTR_4g058930 54.174 539 227 10 28 556 9 537 0.0 535
MS.gene20067.t1 MTR_4g058930 54.174 539 227 10 28 556 9 537 0.0 535
MS.gene20067.t1 MTR_1g094960 49.228 583 232 18 22 567 10 565 3.60e-166 489
MS.gene20067.t1 MTR_3g073420 41.714 525 255 17 27 538 15 501 1.38e-114 355
MS.gene20067.t1 MTR_5g061220 39.494 514 230 17 26 514 14 471 6.75e-98 310
MS.gene20067.t1 MTR_5g040880 32.984 573 258 17 26 557 6 493 2.22e-82 269
MS.gene20067.t1 MTR_2g024430 38.164 414 178 11 28 431 17 362 1.94e-79 261
MS.gene20067.t1 MTR_5g082140 36.219 439 205 10 26 453 7 381 4.33e-77 253
MS.gene20067.t1 MTR_4g088210 38.931 393 178 12 27 407 34 376 5.65e-69 238
MS.gene20067.t1 MTR_1g024025 33.974 468 222 14 24 463 36 444 7.55e-69 244
MS.gene20067.t1 MTR_4g088210 38.931 393 178 12 27 407 34 376 8.39e-69 238
MS.gene20067.t1 MTR_1g058210 32.569 436 231 8 26 456 7 384 5.21e-68 229
MS.gene20067.t1 MTR_2g005240 36.150 426 212 10 23 441 15 387 2.51e-67 233
MS.gene20067.t1 MTR_2g018690 35.646 418 210 10 26 435 18 384 2.85e-67 237
MS.gene20067.t1 MTR_5g076270 35.589 399 199 9 26 416 19 367 4.30e-65 230
MS.gene20067.t1 MTR_8g100050 36.473 414 202 12 31 436 59 419 4.83e-65 228
MS.gene20067.t1 MTR_7g062540 35.422 415 203 11 31 435 14 373 8.13e-65 226
MS.gene20067.t1 MTR_2g093740 35.437 412 203 10 31 428 56 418 1.08e-64 226
MS.gene20067.t1 MTR_8g100050 36.473 414 202 12 31 436 59 419 1.90e-64 228
MS.gene20067.t1 MTR_3g064050 35.338 399 200 9 26 416 21 369 2.18e-64 228
MS.gene20067.t1 MTR_8g079492 35.252 417 212 11 26 435 18 383 4.21e-64 228
MS.gene20067.t1 MTR_8g079492 35.252 417 212 11 26 435 18 383 4.33e-64 228
MS.gene20067.t1 MTR_2g093740 35.437 412 203 10 31 428 56 418 4.77e-64 225
MS.gene20067.t1 MTR_2g093740 35.437 412 203 10 31 428 56 418 8.14e-64 226
MS.gene20067.t1 MTR_2g006270 34.783 414 194 16 28 431 10 357 3.67e-63 216
MS.gene20067.t1 MTR_4g124900 34.038 426 209 12 26 439 18 383 4.65e-61 221
MS.gene20067.t1 MTR_2g093740 34.353 425 203 11 31 428 56 431 5.10e-61 216
MS.gene20067.t1 MTR_4g124900 34.038 426 209 12 26 439 18 383 5.23e-61 221
MS.gene20067.t1 MTR_5g040740 34.826 402 173 12 28 415 9 335 7.81e-61 209
MS.gene20067.t1 MTR_8g027440 35.280 411 205 9 25 428 23 379 1.10e-60 215
MS.gene20067.t1 MTR_2g093740 34.353 425 203 11 31 428 56 431 1.54e-60 216
MS.gene20067.t1 MTR_2g093740 34.353 425 203 11 31 428 56 431 2.42e-60 216
MS.gene20067.t1 MTR_4g060460 33.484 442 228 11 31 455 54 446 7.99e-60 214
MS.gene20067.t1 MTR_2g043250 36.098 410 196 11 13 409 1 357 8.61e-60 217
MS.gene20067.t1 MTR_4g060460 34.793 411 202 11 31 426 54 413 3.09e-59 213
MS.gene20067.t1 MTR_4g021580 34.458 415 210 11 29 434 17 378 1.78e-57 205
MS.gene20067.t1 MTR_4g021580 34.375 416 211 11 29 435 17 379 2.09e-57 206
MS.gene20067.t1 MTR_8g101360 46.759 216 104 3 28 236 28 239 5.99e-56 206
MS.gene20067.t1 MTR_8g101360 38.000 100 59 3 313 410 270 368 2.26e-11 67.8
MS.gene20067.t1 MTR_2g014770 47.196 214 103 4 27 233 49 259 4.01e-52 190
MS.gene20067.t1 MTR_2g014770 35.455 110 66 3 299 407 282 387 3.69e-14 76.3
MS.gene20067.t1 MTR_2g014770 47.196 214 103 4 27 233 49 259 1.04e-51 190
MS.gene20067.t1 MTR_2g014770 35.455 110 66 3 299 407 282 387 3.18e-14 76.6
MS.gene20067.t1 MTR_8g079492 35.143 350 174 9 88 435 3 301 1.41e-50 188
MS.gene20067.t1 MTR_2g006380 31.719 413 201 15 28 431 17 357 7.62e-49 177
MS.gene20067.t1 MTR_5g061890 31.592 402 191 13 28 414 9 341 9.27e-49 176
MS.gene20067.t1 MTR_5g060780 31.061 396 190 12 28 408 9 336 4.95e-48 174
MS.gene20067.t1 MTR_5g460920 31.061 396 190 12 28 408 9 336 1.80e-47 172
MS.gene20067.t1 MTR_2g093740 37.124 299 138 6 132 428 38 288 1.11e-46 175
MS.gene20067.t1 MTR_2g093740 37.124 299 138 6 132 428 38 288 1.38e-46 175
MS.gene20067.t1 MTR_2g093740 35.577 312 138 7 132 428 38 301 3.10e-43 165
MS.gene20067.t1 MTR_2g093740 35.577 312 138 7 132 428 38 301 3.21e-43 166
MS.gene20067.t1 MTR_5g060630 28.107 523 249 19 26 477 7 473 6.39e-42 159
MS.gene20067.t1 MTR_5g460740 28.107 523 249 19 26 477 7 473 6.39e-42 159
MS.gene20067.t1 MTR_8g446900 29.639 388 200 13 73 455 8 327 4.17e-39 148
MS.gene20067.t1 MTR_5g062970 35.468 203 112 3 27 220 34 226 4.97e-37 138
MS.gene20067.t1 MTR_5g062960 33.889 180 92 6 302 477 1 157 3.31e-22 95.5
MS.gene20067.t1 MTR_5g060770 28.042 189 114 7 76 255 6 181 6.16e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20067.t1 AT4G30080 54.737 475 183 11 26 488 14 468 7.01e-167 493
MS.gene20067.t1 AT2G28350 46.777 605 264 16 26 601 5 580 1.05e-162 482
MS.gene20067.t1 AT2G28350 46.777 605 264 16 26 601 5 580 1.68e-162 483
MS.gene20067.t1 AT1G77850 37.862 552 306 10 25 564 13 539 1.90e-112 350
MS.gene20067.t1 AT1G77850 37.862 552 306 10 25 564 13 539 2.77e-112 350
MS.gene20067.t1 AT1G30330 34.763 443 224 11 1 435 1 386 2.03e-68 240
MS.gene20067.t1 AT1G30330 34.763 443 224 11 1 435 1 386 2.03e-68 240
MS.gene20067.t1 AT1G19850 35.697 409 193 11 15 407 34 388 2.53e-68 240
MS.gene20067.t1 AT1G19850 35.697 409 193 11 15 407 23 377 2.62e-68 239
MS.gene20067.t1 AT1G59750 33.908 522 275 15 31 537 22 488 9.29e-68 234
MS.gene20067.t1 AT1G59750 33.908 522 275 15 31 537 22 488 9.29e-68 234
MS.gene20067.t1 AT1G59750 34.038 520 272 14 31 537 22 483 9.77e-68 234
MS.gene20067.t1 AT1G30330 35.407 418 211 10 26 435 18 384 1.86e-67 238
MS.gene20067.t1 AT1G59750 34.226 523 269 16 31 537 22 485 2.93e-67 233
MS.gene20067.t1 AT5G37020 35.088 399 201 9 26 416 17 365 4.04e-66 231
MS.gene20067.t1 AT5G60450 35.012 417 209 10 22 425 32 399 9.02e-66 231
MS.gene20067.t1 AT5G37020 35.088 399 201 9 26 416 17 365 9.14e-66 231
MS.gene20067.t1 AT5G62000 34.932 438 219 11 2 426 26 410 1.44e-65 231
MS.gene20067.t1 AT5G62000 34.932 438 219 11 2 426 26 410 1.44e-65 231
MS.gene20067.t1 AT5G62000 34.932 438 219 11 2 426 26 410 1.44e-65 231
MS.gene20067.t1 AT5G62000 34.932 438 219 11 2 426 26 410 1.44e-65 231
MS.gene20067.t1 AT5G62000 34.932 438 219 11 2 426 26 410 2.02e-65 231
MS.gene20067.t1 AT5G60450 35.294 408 202 10 31 425 65 423 5.65e-65 229
MS.gene20067.t1 AT2G33860 33.190 464 239 14 31 476 54 464 1.46e-64 224
MS.gene20067.t1 AT3G61830 34.107 431 214 12 31 452 25 394 7.45e-60 211
MS.gene20067.t1 AT2G46530 34.456 386 188 10 31 407 21 350 1.05e-59 211
MS.gene20067.t1 AT2G46530 34.456 386 188 10 31 407 42 371 1.67e-59 211
MS.gene20067.t1 AT1G34310 34.975 406 202 10 28 428 24 372 9.67e-57 202
MS.gene20067.t1 AT1G35240 34.307 411 204 11 31 435 27 377 1.06e-56 202
MS.gene20067.t1 AT1G35520 34.390 410 205 10 31 435 27 377 5.62e-56 200
MS.gene20067.t1 AT1G34410 33.902 410 207 10 31 435 27 377 1.75e-55 199
MS.gene20067.t1 AT1G19220 45.622 217 108 3 26 236 18 230 1.55e-54 201
MS.gene20067.t1 AT1G19220 36.220 127 78 3 313 438 261 385 7.08e-14 75.9
MS.gene20067.t1 AT1G35540 33.750 400 204 9 31 425 27 370 2.66e-53 193
MS.gene20067.t1 AT5G20730 43.318 217 113 3 26 236 19 231 5.89e-53 197
MS.gene20067.t1 AT5G20730 34.375 128 80 4 313 438 262 387 6.00e-12 69.7
MS.gene20067.t1 AT5G20730 43.318 217 113 3 26 236 19 231 6.52e-53 197
MS.gene20067.t1 AT5G20730 34.375 128 80 4 313 438 262 387 5.26e-12 69.7
MS.gene20067.t1 AT5G20730 43.318 217 113 3 26 236 19 231 7.08e-53 197
MS.gene20067.t1 AT5G20730 33.858 127 81 3 313 438 262 386 7.19e-13 72.8
MS.gene20067.t1 AT4G23980 31.658 398 212 9 31 421 12 356 4.07e-52 190
MS.gene20067.t1 AT4G23980 31.658 398 212 9 31 421 12 356 5.47e-52 190
MS.gene20067.t1 AT1G34170 32.187 407 211 10 9 407 3 352 4.87e-50 182
MS.gene20067.t1 AT3G61830 33.420 383 191 10 73 452 22 343 3.93e-49 180
MS.gene20067.t1 AT5G37020 36.934 287 132 7 132 416 31 270 5.78e-47 177
MS.gene20067.t1 AT2G33860 33.427 356 176 11 132 476 2 307 1.59e-46 171
MS.gene20067.t1 AT1G34390 32.432 407 203 11 31 428 27 370 8.90e-46 172
MS.gene20067.t1 AT1G34170 30.958 407 190 10 9 407 3 326 9.47e-44 164
MS.gene20067.t1 AT1G34170 30.958 407 190 10 9 407 3 326 3.48e-43 164
MS.gene20067.t1 AT2G46530 34.173 278 132 6 131 407 36 263 3.11e-41 157
MS.gene20067.t1 AT1G43950 37.864 206 113 6 31 231 27 222 2.62e-33 127
MS.gene20067.t1 AT3G25730 27.807 187 107 4 82 255 122 293 1.58e-12 69.7
MS.gene20067.t1 AT2G46870 36.458 96 60 1 125 220 28 122 3.52e-11 65.5
MS.gene20067.t1 AT1G13260 31.507 146 73 5 111 252 171 293 8.81e-11 64.3

Find 156 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAAGTTGGCATTGGAAAT+TGG 0.228346 7.2:-11028090 None:intergenic
TGGAATGAAAGACGGAATTT+TGG 0.237258 7.2:-11026378 None:intergenic
TGGCCATCAATTGGGAAATC+TGG 0.249420 7.2:-11028070 None:intergenic
GGCATTTCAGGCACGTTTAT+AGG 0.250063 7.2:+11026711 MS.gene20067:CDS
GCATTTCAGGCACGTTTATA+GGG 0.272489 7.2:+11026712 MS.gene20067:CDS
CTTGTGAAAACTTCTTTAAT+TGG 0.278075 7.2:+11027148 MS.gene20067:CDS
CAGCTATGGCATGCCGTTGC+AGG 0.280375 7.2:+11026257 MS.gene20067:CDS
CAACGTGTCTGAAATAATTA+AGG 0.291929 7.2:+11026523 MS.gene20067:CDS
ATGGCGAAAAGTGGCATTTC+AGG 0.309403 7.2:+11026699 MS.gene20067:CDS
CGGAACTATTGCTTCTGTTC+AGG 0.311558 7.2:+11027258 MS.gene20067:CDS
GTTGGAGTCGATCCTTTGTT+AGG 0.313766 7.2:+11026881 MS.gene20067:CDS
TTCCACTAGCGGCGCGAAAA+TGG 0.315002 7.2:+11028735 MS.gene20067:CDS
CTCCCAGATTTCCCAATTGA+TGG 0.331554 7.2:+11028067 MS.gene20067:CDS
TTAGGATTTAGAAGGTTGTT+TGG 0.339574 7.2:-11028112 None:intergenic
TTCAGCTAACCCTCCTCTTC+AGG 0.348707 7.2:+11026655 MS.gene20067:CDS
TTGGAATATTAGGATTTAGA+AGG 0.349891 7.2:-11028120 None:intergenic
TTGGAATTCGGAGGGCTAAA+AGG 0.350812 7.2:+11026849 MS.gene20067:CDS
TATTATTATTAAACGGTTGT+TGG 0.355810 7.2:-11028258 None:intergenic
ATTGGAAATTGGCCATCAAT+TGG 0.356580 7.2:-11028079 None:intergenic
CATGCCGGCAGGACTAGTTT+CGG 0.360765 7.2:-11028155 None:intergenic
AGAAGGTTGTTTGGAAAAGT+TGG 0.365277 7.2:-11028103 None:intergenic
TGGAAATCTGGTAGTGGAAT+TGG 0.365957 7.2:+11026905 MS.gene20067:CDS
CTGCGAATGTTTCTTCGCAT+TGG 0.366575 7.2:-11028561 None:intergenic
CAGTGTCGACTTGTATTGTT+TGG 0.368403 7.2:-11028432 None:intergenic
AATGGAAGATTATGAAAATC+TGG 0.372719 7.2:-11028214 None:intergenic
TTTGCAATGCCAAGTTATTA+GGG 0.373972 7.2:-11028303 None:intergenic
TCAAGGATAAGTTGGTTTAT+CGG 0.374081 7.2:+11027238 MS.gene20067:CDS
GGAGCCAGGCATGGTCATTT+CGG 0.375741 7.2:+11028181 MS.gene20067:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7.2:+11026497 MS.gene20067:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7.2:-11026473 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.392584 7.2:+11026743 MS.gene20067:CDS
CCTTTGTTAGGGTGGAAATC+TGG 0.395570 7.2:+11026893 MS.gene20067:CDS
GGTAATCTCAATTTCTTCCT+TGG 0.395833 7.2:-11028040 None:intergenic
TTGGAACAGCACTTCAGATT+AGG 0.401029 7.2:+11027167 MS.gene20067:CDS
GCGATCTTCATGTTGGAATT+CGG 0.404653 7.2:+11026837 MS.gene20067:CDS
CTGGCTCCCTGCATGCCGGC+AGG 0.407927 7.2:-11028166 None:intergenic
GCCATCTTGAACCTCATTCC+AGG 0.409391 7.2:-11027196 None:intergenic
TTAAACGGTTGTTGGAAACT+AGG 0.416552 7.2:-11028250 None:intergenic
AACTAGTCCTGCCGGCATGC+AGG 0.419630 7.2:+11028159 MS.gene20067:CDS
CAATCCAACTGAGATGAATA+TGG 0.421601 7.2:+11026190 MS.gene20067:CDS
AAAACATGTGAGTTAACTTC+TGG 0.421701 7.2:-11026296 None:intergenic
AGCGACAAGAAACTTGCGTC+TGG 0.427650 7.2:+11026782 MS.gene20067:CDS
TTGGAAATTGGCCATCAATT+GGG 0.428714 7.2:-11028078 None:intergenic
TGCACAATCTTCAGAGAAAC+CGG 0.428735 7.2:+11028375 MS.gene20067:CDS
GTCGCAATATTATTATTAAA+CGG 0.430671 7.2:-11028265 None:intergenic
CTTATTGCTTCAACTCTACA+TGG 0.431451 7.2:-11026398 None:intergenic
CTGCCGGCATGCAGGGAGCC+AGG 0.432868 7.2:+11028167 MS.gene20067:CDS
ACATTAGAGATGAAACATTC+AGG 0.433701 7.2:+11028589 MS.gene20067:CDS
GAAATGTTCTCACTGGTGTT+CGG 0.434122 7.2:-11028328 None:intergenic
AGTTGAAGCAATAAGATATA+TGG 0.445009 7.2:+11026406 MS.gene20067:CDS
CTAGGCTGAAAGAGACCTAA+TGG 0.448362 7.2:-11028232 None:intergenic
CATCATTATCAAAACTAACT+TGG 0.449861 7.2:-11026487 None:intergenic
TGATGAGTCCTCAGTTTCAA+TGG 0.449908 7.2:-11027218 None:intergenic
GATAATAAACTTCGAAGAAA+CGG 0.452871 7.2:+11026980 MS.gene20067:CDS
GCTAATAAGTGATGGAATGA+TGG 0.454476 7.2:+11027018 MS.gene20067:CDS
GTTGTCAACAAATGCCTCTT+CGG 0.456311 7.2:-11026740 None:intergenic
ATGCCGGCAGGACTAGTTTC+GGG 0.456648 7.2:-11028154 None:intergenic
TTCTTCCTTGGCGGTATGAA+AGG 0.458131 7.2:-11028028 None:intergenic
CGCCGAGCATGCATGTGAAC+CGG 0.459270 7.2:+11026337 MS.gene20067:CDS
AGTTTCTTGTCGCTGACAAA+AGG 0.461470 7.2:-11026773 None:intergenic
GTGGTTTATTATCCTCGGTC+AGG 0.470650 7.2:+11027112 MS.gene20067:CDS
CACCGGTTCACATGCATGCT+CGG 0.471821 7.2:-11026339 None:intergenic
AAGTGATGGAATGATGGGTA+GGG 0.472687 7.2:+11027024 MS.gene20067:CDS
GACTCCATATTCATCTCAGT+TGG 0.472803 7.2:-11026194 None:intergenic
TTGGAGTCGATCCTTTGTTA+GGG 0.473989 7.2:+11026882 MS.gene20067:CDS
ATTTGTCCTGCACCACCTTA+CGG 0.476461 7.2:+11026929 MS.gene20067:CDS
CGAAGAAACGGTAAAGGTAA+TGG 0.476494 7.2:+11026992 MS.gene20067:CDS
ATCCAGCTCTACAATTGAAC+CGG 0.480648 7.2:-11028780 None:intergenic
CACCGGTTCAATTGTAGAGC+TGG 0.485302 7.2:+11028778 MS.gene20067:CDS
TTGATGTGGTTTATTATCCT+CGG 0.489017 7.2:+11027107 MS.gene20067:CDS
TTGTTTGGAAAAGTTGGCAT+TGG 0.489751 7.2:-11028097 None:intergenic
GGATAATAAACCACATCAAA+CGG 0.491751 7.2:-11027103 None:intergenic
GGCCATCAATTGGGAAATCT+GGG 0.492331 7.2:-11028069 None:intergenic
AGGACTCATCAAGGATAAGT+TGG 0.493550 7.2:+11027230 MS.gene20067:CDS
CTTCAGATTAGGTGGTGTCC+TGG 0.494054 7.2:+11027178 MS.gene20067:CDS
TGGTGCGGCTTTGCATGATC+CGG 0.495348 7.2:-11028394 None:intergenic
AATCTCAATTTCTTCCTTGG+CGG 0.497432 7.2:-11028037 None:intergenic
CATCAGATGTACGTGTCGGC+AGG 0.505339 7.2:-11028513 None:intergenic
TAAGTGATGGAATGATGGGT+AGG 0.517866 7.2:+11027023 MS.gene20067:CDS
TTCAGGCTGCTGATCCGTCA+TGG 0.519149 7.2:+11027275 MS.gene20067:CDS
ACTAGTCCTGCCGGCATGCA+GGG 0.520362 7.2:+11028160 MS.gene20067:CDS
ATCTTCATGTTGGAATTCGG+AGG 0.523611 7.2:+11026840 MS.gene20067:CDS
GATGACTGTCCCTAATAACT+TGG 0.526305 7.2:+11028294 MS.gene20067:CDS
GGCATGCAGGGAGCCAGGCA+TGG 0.527776 7.2:+11028172 MS.gene20067:CDS
AAGACCGAAATGACCATGCC+TGG 0.532259 7.2:-11028185 None:intergenic
AATCCTCCGTAAGGTGGTGC+AGG 0.533772 7.2:-11026935 None:intergenic
TTAGGGTGGAAATCTGGTAG+TGG 0.537403 7.2:+11026899 MS.gene20067:CDS
AGCGTTTCTGCACAATATCT+AGG 0.540389 7.2:-11026614 None:intergenic
GCGACAAGAAACTTGCGTCT+GGG 0.540853 7.2:+11026783 MS.gene20067:CDS
GGCGGTATGAAAGGCGAAAG+AGG 0.541655 7.2:-11028019 None:intergenic
GAGTAAGCACTGAAATTCAC+CGG 0.548533 7.2:-11026356 None:intergenic
AGGATGTTCATGGCGAAAAG+TGG 0.550349 7.2:+11026690 MS.gene20067:CDS
CGACAAGAAACTTGCGTCTG+GGG 0.550603 7.2:+11026784 MS.gene20067:CDS
AATGGATTGCTAATAAGTGA+TGG 0.550837 7.2:+11027010 MS.gene20067:CDS
TTACCCGAAACTAGTCCTGC+CGG 0.553790 7.2:+11028151 MS.gene20067:CDS
AAGATTATGAAAATCTGGTA+AGG 0.555027 7.2:-11028209 None:intergenic
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7.2:+11026863 MS.gene20067:CDS
ATGCCTGGCTCCCTGCATGC+CGG 0.557141 7.2:-11028170 None:intergenic
GTGATGGAATGATGGGTAGG+GGG 0.558347 7.2:+11027026 MS.gene20067:CDS
CATTTCAGGCACGTTTATAG+GGG 0.562067 7.2:+11026713 MS.gene20067:CDS
TTGCACCATTCCTCCTGCAA+CGG 0.567997 7.2:-11026270 None:intergenic
AGTGATGGAATGATGGGTAG+GGG 0.568376 7.2:+11027025 MS.gene20067:CDS
GGCATTTGTTGACAACTGGA+TGG 0.569244 7.2:+11026747 MS.gene20067:CDS
TTAGGTGGTGTCCTGGAATG+AGG 0.569864 7.2:+11027185 MS.gene20067:CDS
ATTGGGAAATCTGGGAGTTG+AGG 0.570713 7.2:-11028061 None:intergenic
TTGAAACTGAGGACTCATCA+AGG 0.572823 7.2:+11027221 MS.gene20067:CDS
AAACTTCGAAGAAACGGTAA+AGG 0.575815 7.2:+11026986 MS.gene20067:CDS
GAGACTTCATCAGAAAAGCT+AGG 0.576418 7.2:+11028692 MS.gene20067:intron
AACGATGGAAATCCTCCGTA+AGG 0.577357 7.2:-11026944 None:intergenic
GAAAACGGCGATCTTCATGT+TGG 0.577451 7.2:+11026830 MS.gene20067:CDS
AGAGTGTGGACCCTCAGCTA+TGG 0.582931 7.2:+11026243 MS.gene20067:CDS
GAGTCGATCCTTTGTTAGGG+TGG 0.585067 7.2:+11026885 MS.gene20067:CDS
CTATGGCATGCCGTTGCAGG+AGG 0.585809 7.2:+11026260 MS.gene20067:CDS
TAATATGCAGCCGTTTGATG+TGG 0.585844 7.2:+11027093 MS.gene20067:CDS
AAGTTATTAGGGACAGTCAT+CGG 0.589613 7.2:-11028292 None:intergenic
CTAATAAGTGATGGAATGAT+GGG 0.591799 7.2:+11027019 MS.gene20067:CDS
GCAACGGCATGCCATAGCTG+AGG 0.591988 7.2:-11026254 None:intergenic
GCATGCTCGGCGTGACCCTG+AGG 0.592711 7.2:-11026326 None:intergenic
CATGCTCGGCGTGACCCTGA+GGG 0.593580 7.2:-11026325 None:intergenic
CGTCATGGTCTGATTCTATG+TGG 0.597184 7.2:+11027290 MS.gene20067:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.603398 7.2:-11026570 None:intergenic
CGAGCATGAAATGTTCTCAC+TGG 0.604009 7.2:-11028335 None:intergenic
GCATGCCGTTGCAGGAGGAA+TGG 0.606658 7.2:+11026265 MS.gene20067:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7.2:+11026444 MS.gene20067:CDS
CAGCTCTACAATTGAACCGG+TGG 0.607879 7.2:-11028777 None:intergenic
GATACTATTTCAACTTGCCA+CGG 0.610748 7.2:-11027980 None:intergenic
GCGGTATGAAAGGCGAAAGA+GGG 0.612138 7.2:-11028018 None:intergenic
CACTAGCGGCGCGAAAATGG+AGG 0.612645 7.2:+11028738 MS.gene20067:CDS
ACTCTACATGGAATGAAAGA+CGG 0.613123 7.2:-11026386 None:intergenic
CAACGGCATGCCATAGCTGA+GGG 0.613865 7.2:-11026253 None:intergenic
TCCTGGAATGAGGTTCAAGA+TGG 0.614384 7.2:+11027195 MS.gene20067:CDS
TCTTCATGTTGGAATTCGGA+GGG 0.615735 7.2:+11026841 MS.gene20067:CDS
TTTCGCCTTTCATACCGCCA+AGG 0.619271 7.2:+11028023 MS.gene20067:CDS
TCTTCCTCTCCCGAAAACGA+TGG 0.620463 7.2:-11026959 None:intergenic
GAACAGCACTTCAGATTAGG+TGG 0.620797 7.2:+11027170 MS.gene20067:CDS
TTTATAGGGGAACGCCGAAG+AGG 0.625074 7.2:+11026726 MS.gene20067:CDS
GTTATTGAAGCAATAAAACT+CGG 0.633322 7.2:+11027067 MS.gene20067:CDS
CCAGATTTCCACCCTAACAA+AGG 0.634082 7.2:-11026893 None:intergenic
CTCTCATCAGATGTACGTGT+CGG 0.637287 7.2:-11028517 None:intergenic
CAAGATGGCCATTGAAACTG+AGG 0.643200 7.2:+11027210 MS.gene20067:CDS
AAAGGCGAAAGAGGGATCGA+AGG 0.643435 7.2:-11028010 None:intergenic
GATGGAAATCCTCCGTAAGG+TGG 0.645097 7.2:-11026941 None:intergenic
TTCTATGTGGAGACTTCTCG+AGG 0.645176 7.2:+11027303 MS.gene20067:CDS
ATGTGAAAAGAGTGAATCCG+TGG 0.650057 7.2:+11027963 MS.gene20067:CDS
CAAACAATACAAGTCGACAC+TGG 0.651728 7.2:+11028433 MS.gene20067:CDS
TCTGATGCAAACAATGGTGG+TGG 0.655667 7.2:+11026581 MS.gene20067:CDS
CAATGCGAAGAAACATTCGC+AGG 0.655730 7.2:+11028562 MS.gene20067:CDS
CATCTGATGAGAGGTTCGAG+TGG 0.680653 7.2:+11028527 MS.gene20067:CDS
TGTCCTGCACCACCTTACGG+AGG 0.685773 7.2:+11026932 MS.gene20067:CDS
CACATAGAATCAGACCATGA+CGG 0.689130 7.2:-11027289 None:intergenic
CGACACGTACATCTGATGAG+AGG 0.689516 7.2:+11028518 MS.gene20067:CDS
ACTTCATCAGAAAAGCTAGG+AGG 0.691502 7.2:+11028695 MS.gene20067:CDS
ACACAATCTGATGCAAACAA+TGG 0.696099 7.2:+11026575 MS.gene20067:CDS
CAATCTGATGCAAACAATGG+TGG 0.722659 7.2:+11026578 MS.gene20067:CDS
AACTCAGGAGTACCTGACCG+AGG 0.728041 7.2:-11027124 None:intergenic
TTAGCTGAATAGTCCAAACG+AGG 0.756003 7.2:-11026641 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATTGGAATATT+AGG - chr7.2:11028133-11028152 None:intergenic 10.0%
!! TAGTAATATATGCAATAAAA+AGG - chr7.2:11027840-11027859 None:intergenic 15.0%
!! TTAATGTATATATTTGTGTA+TGG + chr7.2:11027723-11027742 MS.gene20067:intron 15.0%
!!! GTTAGATTTTACTTATATTT+TGG + chr7.2:11027429-11027448 MS.gene20067:intron 15.0%
!!! TTTTAGCAAATTCTAATAAT+AGG - chr7.2:11027618-11027637 None:intergenic 15.0%
!! ATTCAAAGTAAAATATGTGA+AGG - chr7.2:11027685-11027704 None:intergenic 20.0%
!! GTCGCAATATTATTATTAAA+CGG - chr7.2:11028268-11028287 None:intergenic 20.0%
!! TATTATTATTAAACGGTTGT+TGG - chr7.2:11028261-11028280 None:intergenic 20.0%
!! TCAAGTAAATTAATTCTAGA+GGG - chr7.2:11027352-11027371 None:intergenic 20.0%
!!! GAATGTTTTGAGAATAATAA+CGG + chr7.2:11027389-11027408 MS.gene20067:intron 20.0%
! AACTTAAAAGGATTATGCTT+TGG - chr7.2:11027568-11027587 None:intergenic 25.0%
! AAGATTATGAAAATCTGGTA+AGG - chr7.2:11028212-11028231 None:intergenic 25.0%
! AATGGAAGATTATGAAAATC+TGG - chr7.2:11028217-11028236 None:intergenic 25.0%
! AGTTGAAGCAATAAGATATA+TGG + chr7.2:11026406-11026425 MS.gene20067:CDS 25.0%
! CATCATTATCAAAACTAACT+TGG - chr7.2:11026490-11026509 None:intergenic 25.0%
! CTAACTTGGTTAATATTCAT+AGG - chr7.2:11026476-11026495 None:intergenic 25.0%
! CTCAAGTAAATTAATTCTAG+AGG - chr7.2:11027353-11027372 None:intergenic 25.0%
! CTTGTGAAAACTTCTTTAAT+TGG + chr7.2:11027148-11027167 MS.gene20067:CDS 25.0%
! GATAATAAACTTCGAAGAAA+CGG + chr7.2:11026980-11026999 MS.gene20067:CDS 25.0%
! GTATGGTAATATAGATACAA+TGG + chr7.2:11027740-11027759 MS.gene20067:intron 25.0%
! GTTATTGAAGCAATAAAACT+CGG + chr7.2:11027067-11027086 MS.gene20067:CDS 25.0%
! TCTCTTCTTACAATTTCATT+AGG - chr7.2:11027779-11027798 None:intergenic 25.0%
! TTGGAATATTAGGATTTAGA+AGG - chr7.2:11028123-11028142 None:intergenic 25.0%
!! GATTTTCATAATCTTCCATT+AGG + chr7.2:11028217-11028236 MS.gene20067:CDS 25.0%
!! GTTTCGGGTAAATAAAAAAT+TGG - chr7.2:11028142-11028161 None:intergenic 25.0%
!! TGATTTGTATAAATTCCACA+AGG - chr7.2:11027499-11027518 None:intergenic 25.0%
!! TTTTCATCAGTACCATAAAT+TGG + chr7.2:11027586-11027605 MS.gene20067:intron 25.0%
!!! ATGATTAGTCATTTTCTTCT+CGG - chr7.2:11028470-11028489 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG + chr7.2:11026488-11026507 MS.gene20067:CDS 25.0%
!!! TCATACTTTTTAGGTTACAT+GGG + chr7.2:11027919-11027938 MS.gene20067:intron 25.0%
!!! TTCACATTTTTAAGTATCTC+AGG - chr7.2:11027950-11027969 None:intergenic 25.0%
!!! TTTCTGATGTCATACTTTTT+AGG + chr7.2:11027910-11027929 MS.gene20067:intron 25.0%
AAAACATGTGAGTTAACTTC+TGG - chr7.2:11026299-11026318 None:intergenic 30.0%
AATAGGAAGCTTCCAATTTA+TGG - chr7.2:11027601-11027620 None:intergenic 30.0%
ACATTAGAGATGAAACATTC+AGG + chr7.2:11028589-11028608 MS.gene20067:CDS 30.0%
CTACATCACTATCATACATT+AGG + chr7.2:11027647-11027666 MS.gene20067:intron 30.0%
GGATAATAAACCACATCAAA+CGG - chr7.2:11027106-11027125 None:intergenic 30.0%
TAGATACAATGGAACATTGT+TGG + chr7.2:11027751-11027770 MS.gene20067:intron 30.0%
TGACATCAGAAAATCATTCA+CGG - chr7.2:11027902-11027921 None:intergenic 30.0%
TTAGGATTTAGAAGGTTGTT+TGG - chr7.2:11028115-11028134 None:intergenic 30.0%
TTGATGTGGTTTATTATCCT+CGG + chr7.2:11027107-11027126 MS.gene20067:CDS 30.0%
TTGCAAGAATACACATTCTA+TGG - chr7.2:11027533-11027552 None:intergenic 30.0%
TTTGCAATGCCAAGTTATTA+GGG - chr7.2:11028306-11028325 None:intergenic 30.0%
! CAACGTGTCTGAAATAATTA+AGG + chr7.2:11026523-11026542 MS.gene20067:CDS 30.0%
! CTAATAAGTGATGGAATGAT+GGG + chr7.2:11027019-11027038 MS.gene20067:CDS 30.0%
! CTAATGTATGATAGTGATGT+AGG - chr7.2:11027649-11027668 None:intergenic 30.0%
! TAGGAGGTTGACAATTTTAA+TGG + chr7.2:11028711-11028730 MS.gene20067:CDS 30.0%
! TATGATAGTGATGTAGGTAT+AGG - chr7.2:11027643-11027662 None:intergenic 30.0%
! TTTTGCAATGCCAAGTTATT+AGG - chr7.2:11028307-11028326 None:intergenic 30.0%
!! AATGGATTGCTAATAAGTGA+TGG + chr7.2:11027010-11027029 MS.gene20067:CDS 30.0%
!! GGTACTGATGAAAACTTAAA+AGG - chr7.2:11027580-11027599 None:intergenic 30.0%
!! TCAAGGATAAGTTGGTTTAT+CGG + chr7.2:11027238-11027257 MS.gene20067:CDS 30.0%
!!! ATTTTAATGGATTCCACTAG+CGG + chr7.2:11028724-11028743 MS.gene20067:CDS 30.0%
!!! GTCATACTTTTTAGGTTACA+TGG + chr7.2:11027918-11027937 MS.gene20067:intron 30.0%
!!! GTGTTTTTGAGATCTGAAAA+CGG + chr7.2:11026815-11026834 MS.gene20067:CDS 30.0%
AAACTTCGAAGAAACGGTAA+AGG + chr7.2:11026986-11027005 MS.gene20067:CDS 35.0%
AAGTTATTAGGGACAGTCAT+CGG - chr7.2:11028295-11028314 None:intergenic 35.0%
AATCTCAATTTCTTCCTTGG+CGG - chr7.2:11028040-11028059 None:intergenic 35.0%
ACACAATCTGATGCAAACAA+TGG + chr7.2:11026575-11026594 MS.gene20067:CDS 35.0%
ACTCTACATGGAATGAAAGA+CGG - chr7.2:11026389-11026408 None:intergenic 35.0%
AGAAGGTTGTTTGGAAAAGT+TGG - chr7.2:11028106-11028125 None:intergenic 35.0%
ATCAGCAAGAAAAAAACCAC+CGG + chr7.2:11028761-11028780 MS.gene20067:CDS 35.0%
ATGAAGTGTATGCAAAACTC+AGG + chr7.2:11026444-11026463 MS.gene20067:CDS 35.0%
ATTGGAAATTGGCCATCAAT+TGG - chr7.2:11028082-11028101 None:intergenic 35.0%
CAATCCAACTGAGATGAATA+TGG + chr7.2:11026190-11026209 MS.gene20067:CDS 35.0%
CTTATTGCTTCAACTCTACA+TGG - chr7.2:11026401-11026420 None:intergenic 35.0%
GAAAAATATCCTGAAGAGGA+GGG - chr7.2:11026667-11026686 None:intergenic 35.0%
GAAAAATGTGAACAAGAGTG+TGG + chr7.2:11026229-11026248 MS.gene20067:CDS 35.0%
GATACTATTTCAACTTGCCA+CGG - chr7.2:11027983-11028002 None:intergenic 35.0%
GCTAAAAGGCGAAATAATGT+TGG + chr7.2:11026863-11026882 MS.gene20067:CDS 35.0%
GGTAATCTCAATTTCTTCCT+TGG - chr7.2:11028043-11028062 None:intergenic 35.0%
TTAAACGGTTGTTGGAAACT+AGG - chr7.2:11028253-11028272 None:intergenic 35.0%
TTGGAAATTGGCCATCAATT+GGG - chr7.2:11028081-11028100 None:intergenic 35.0%
TTGGGAAAAATATCCTGAAG+AGG - chr7.2:11026671-11026690 None:intergenic 35.0%
TTGTCATATAGCAGCTATAG+TGG + chr7.2:11027458-11027477 MS.gene20067:intron 35.0%
TTGTTTGGAAAAGTTGGCAT+TGG - chr7.2:11028100-11028119 None:intergenic 35.0%
! ATTTTTCCCAAGGATGTTCA+TGG + chr7.2:11026680-11026699 MS.gene20067:CDS 35.0%
! GAAAAGTTGGCATTGGAAAT+TGG - chr7.2:11028093-11028112 None:intergenic 35.0%
! GAAGTTTTCACAAGAAACTC+AGG - chr7.2:11027142-11027161 None:intergenic 35.0%
! GAGTTTTGCATACACTTCAT+CGG - chr7.2:11026444-11026463 None:intergenic 35.0%
! GCTAATAAGTGATGGAATGA+TGG + chr7.2:11027018-11027037 MS.gene20067:CDS 35.0%
! TCTTCAGGATATTTTTCCCA+AGG + chr7.2:11026670-11026689 MS.gene20067:CDS 35.0%
! TGGAATGAAAGACGGAATTT+TGG - chr7.2:11026381-11026400 None:intergenic 35.0%
!! TTTGATAATGATGGTGTTGC+TGG + chr7.2:11026497-11026516 MS.gene20067:CDS 35.0%
ACTTCATCAGAAAAGCTAGG+AGG + chr7.2:11028695-11028714 MS.gene20067:CDS 40.0%
AGCGTTTCTGCACAATATCT+AGG - chr7.2:11026617-11026636 None:intergenic 40.0%
AGGACTCATCAAGGATAAGT+TGG + chr7.2:11027230-11027249 MS.gene20067:CDS 40.0%
AGTTTCTTGTCGCTGACAAA+AGG - chr7.2:11026776-11026795 None:intergenic 40.0%
ATCATTCACGGCTGAAACAA+AGG - chr7.2:11027890-11027909 None:intergenic 40.0%
ATCCAGCTCTACAATTGAAC+CGG - chr7.2:11028783-11028802 None:intergenic 40.0%
ATCTTCATGTTGGAATTCGG+AGG + chr7.2:11026840-11026859 MS.gene20067:CDS 40.0%
ATGTGAAAAGAGTGAATCCG+TGG + chr7.2:11027963-11027982 MS.gene20067:CDS 40.0%
CAAACAATACAAGTCGACAC+TGG + chr7.2:11028433-11028452 MS.gene20067:CDS 40.0%
CAATCTGATGCAAACAATGG+TGG + chr7.2:11026578-11026597 MS.gene20067:CDS 40.0%
CACATAGAATCAGACCATGA+CGG - chr7.2:11027292-11027311 None:intergenic 40.0%
CACTATATTGCTATGCCTTG+TGG + chr7.2:11027481-11027500 MS.gene20067:intron 40.0%
CATTTCAGGCACGTTTATAG+GGG + chr7.2:11026713-11026732 MS.gene20067:CDS 40.0%
CGAAGAAACGGTAAAGGTAA+TGG + chr7.2:11026992-11027011 MS.gene20067:CDS 40.0%
GAAATGTTCTCACTGGTGTT+CGG - chr7.2:11028331-11028350 None:intergenic 40.0%
GACTCCATATTCATCTCAGT+TGG - chr7.2:11026197-11026216 None:intergenic 40.0%
GAGACTTCATCAGAAAAGCT+AGG + chr7.2:11028692-11028711 MS.gene20067:intron 40.0%
GATGACTGTCCCTAATAACT+TGG + chr7.2:11028294-11028313 MS.gene20067:CDS 40.0%
GCATTTCAGGCACGTTTATA+GGG + chr7.2:11026712-11026731 MS.gene20067:CDS 40.0%
GCGATCTTCATGTTGGAATT+CGG + chr7.2:11026837-11026856 MS.gene20067:CDS 40.0%
GGAAAAATATCCTGAAGAGG+AGG - chr7.2:11026668-11026687 None:intergenic 40.0%
GTAAAATATGTGAAGGCCCT+CGG - chr7.2:11027678-11027697 None:intergenic 40.0%
GTTGTCAACAAATGCCTCTT+CGG - chr7.2:11026743-11026762 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG - chr7.2:11026573-11026592 None:intergenic 40.0%
TAAAATATGTGAAGGCCCTC+GGG - chr7.2:11027677-11027696 None:intergenic 40.0%
TAATATGCAGCCGTTTGATG+TGG + chr7.2:11027093-11027112 MS.gene20067:CDS 40.0%
TCTTCATGTTGGAATTCGGA+GGG + chr7.2:11026841-11026860 MS.gene20067:CDS 40.0%
TGATGAGTCCTCAGTTTCAA+TGG - chr7.2:11027221-11027240 None:intergenic 40.0%
TGCACAATCTTCAGAGAAAC+CGG + chr7.2:11028375-11028394 MS.gene20067:CDS 40.0%
TTAGCTGAATAGTCCAAACG+AGG - chr7.2:11026644-11026663 None:intergenic 40.0%
TTGAAACTGAGGACTCATCA+AGG + chr7.2:11027221-11027240 MS.gene20067:CDS 40.0%
TTGGAACAGCACTTCAGATT+AGG + chr7.2:11027167-11027186 MS.gene20067:CDS 40.0%
TTGGAGTCGATCCTTTGTTA+GGG + chr7.2:11026882-11026901 MS.gene20067:CDS 40.0%
! ACATGTTTTCTACTTCCCTC+AGG + chr7.2:11026310-11026329 MS.gene20067:CDS 40.0%
! CATGTTTTCTACTTCCCTCA+GGG + chr7.2:11026311-11026330 MS.gene20067:CDS 40.0%
! TTTGGCCAAAAAGCACAAGT+TGG - chr7.2:11028417-11028436 None:intergenic 40.0%
! TTTTCGCCATGAACATCCTT+GGG - chr7.2:11026689-11026708 None:intergenic 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG + chr7.2:11026743-11026762 MS.gene20067:CDS 40.0%
!! AAGTGATGGAATGATGGGTA+GGG + chr7.2:11027024-11027043 MS.gene20067:CDS 40.0%
!! CAGTGTCGACTTGTATTGTT+TGG - chr7.2:11028435-11028454 None:intergenic 40.0%
!! GAGTAAGCACTGAAATTCAC+CGG - chr7.2:11026359-11026378 None:intergenic 40.0%
!! TAAGTGATGGAATGATGGGT+AGG + chr7.2:11027023-11027042 MS.gene20067:CDS 40.0%
!! TGGAAATCTGGTAGTGGAAT+TGG + chr7.2:11026905-11026924 MS.gene20067:CDS 40.0%
!!! AGAAACGCTTTTTCCTCGTT+TGG + chr7.2:11026628-11026647 MS.gene20067:CDS 40.0%
AAAATATGTGAAGGCCCTCG+GGG - chr7.2:11027676-11027695 None:intergenic 45.0%
AACGATGGAAATCCTCCGTA+AGG - chr7.2:11026947-11026966 None:intergenic 45.0%
AGGATGTTCATGGCGAAAAG+TGG + chr7.2:11026690-11026709 MS.gene20067:CDS 45.0%
ATGGCGAAAAGTGGCATTTC+AGG + chr7.2:11026699-11026718 MS.gene20067:CDS 45.0%
ATTGGGAAATCTGGGAGTTG+AGG - chr7.2:11028064-11028083 None:intergenic 45.0%
ATTTGTCCTGCACCACCTTA+CGG + chr7.2:11026929-11026948 MS.gene20067:CDS 45.0%
CAAGATGGCCATTGAAACTG+AGG + chr7.2:11027210-11027229 MS.gene20067:CDS 45.0%
CAATGCGAAGAAACATTCGC+AGG + chr7.2:11028562-11028581 MS.gene20067:CDS 45.0%
CATACATTAGGTATCCCCGA+GGG + chr7.2:11027659-11027678 MS.gene20067:intron 45.0%
CCAGATTTCCACCCTAACAA+AGG - chr7.2:11026896-11026915 None:intergenic 45.0%
CCTTTGTTAGGGTGGAAATC+TGG + chr7.2:11026893-11026912 MS.gene20067:CDS 45.0%
CGAGCATGAAATGTTCTCAC+TGG - chr7.2:11028338-11028357 None:intergenic 45.0%
CGGAACTATTGCTTCTGTTC+AGG + chr7.2:11027258-11027277 MS.gene20067:CDS 45.0%
CGTCATGGTCTGATTCTATG+TGG + chr7.2:11027290-11027309 MS.gene20067:CDS 45.0%
CTAGGCTGAAAGAGACCTAA+TGG - chr7.2:11028235-11028254 None:intergenic 45.0%
CTCCCAGATTTCCCAATTGA+TGG + chr7.2:11028067-11028086 MS.gene20067:CDS 45.0%
CTCTCATCAGATGTACGTGT+CGG - chr7.2:11028520-11028539 None:intergenic 45.0%
CTGCGAATGTTTCTTCGCAT+TGG - chr7.2:11028564-11028583 None:intergenic 45.0%
GAAAACGGCGATCTTCATGT+TGG + chr7.2:11026830-11026849 MS.gene20067:CDS 45.0%
GAACAGCACTTCAGATTAGG+TGG + chr7.2:11027170-11027189 MS.gene20067:CDS 45.0%
GGCATTTCAGGCACGTTTAT+AGG + chr7.2:11026711-11026730 MS.gene20067:CDS 45.0%
GGCCATCAATTGGGAAATCT+GGG - chr7.2:11028072-11028091 None:intergenic 45.0%
GTGGTTTATTATCCTCGGTC+AGG + chr7.2:11027112-11027131 MS.gene20067:CDS 45.0%
GTTGGAGTCGATCCTTTGTT+AGG + chr7.2:11026881-11026900 MS.gene20067:CDS 45.0%
TCATACATTAGGTATCCCCG+AGG + chr7.2:11027658-11027677 MS.gene20067:intron 45.0%
TCCTGGAATGAGGTTCAAGA+TGG + chr7.2:11027195-11027214 MS.gene20067:CDS 45.0%
TCTGATGCAAACAATGGTGG+TGG + chr7.2:11026581-11026600 MS.gene20067:CDS 45.0%
TGGCCATCAATTGGGAAATC+TGG - chr7.2:11028073-11028092 None:intergenic 45.0%
TTAGGGTGGAAATCTGGTAG+TGG + chr7.2:11026899-11026918 MS.gene20067:CDS 45.0%
TTCTATGTGGAGACTTCTCG+AGG + chr7.2:11027303-11027322 MS.gene20067:CDS 45.0%
TTCTTCCTTGGCGGTATGAA+AGG - chr7.2:11028031-11028050 None:intergenic 45.0%
TTGGAATTCGGAGGGCTAAA+AGG + chr7.2:11026849-11026868 MS.gene20067:CDS 45.0%
! CGGAGGATTTCCATCGTTTT+CGG + chr7.2:11026949-11026968 MS.gene20067:CDS 45.0%
! CTTTTCGCCATGAACATCCT+TGG - chr7.2:11026690-11026709 None:intergenic 45.0%
! GGAGGATTTCCATCGTTTTC+GGG + chr7.2:11026950-11026969 MS.gene20067:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG + chr7.2:11026747-11026766 MS.gene20067:CDS 45.0%
!! AGTGATGGAATGATGGGTAG+GGG + chr7.2:11027025-11027044 MS.gene20067:CDS 45.0%
!! ATTTCCATCGTTTTCGGGAG+AGG + chr7.2:11026955-11026974 MS.gene20067:CDS 45.0%
!! CCAAAAAGCACAAGTTGGTG+CGG - chr7.2:11028412-11028431 None:intergenic 45.0%
AAAGGCGAAAGAGGGATCGA+AGG - chr7.2:11028013-11028032 None:intergenic 50.0%
AAGACCGAAATGACCATGCC+TGG - chr7.2:11028188-11028207 None:intergenic 50.0%
AGCGACAAGAAACTTGCGTC+TGG + chr7.2:11026782-11026801 MS.gene20067:CDS 50.0%
CAGCTCTACAATTGAACCGG+TGG - chr7.2:11028780-11028799 None:intergenic 50.0%
CATCTGATGAGAGGTTCGAG+TGG + chr7.2:11028527-11028546 MS.gene20067:CDS 50.0%
CGACAAGAAACTTGCGTCTG+GGG + chr7.2:11026784-11026803 MS.gene20067:CDS 50.0%
CGACACGTACATCTGATGAG+AGG + chr7.2:11028518-11028537 MS.gene20067:CDS 50.0%
CTTCAGATTAGGTGGTGTCC+TGG + chr7.2:11027178-11027197 MS.gene20067:CDS 50.0%
GAGTCGATCCTTTGTTAGGG+TGG + chr7.2:11026885-11026904 MS.gene20067:CDS 50.0%
GATGGAAATCCTCCGTAAGG+TGG - chr7.2:11026944-11026963 None:intergenic 50.0%
GCCATCTTGAACCTCATTCC+AGG - chr7.2:11027199-11027218 None:intergenic 50.0%
GCGACAAGAAACTTGCGTCT+GGG + chr7.2:11026783-11026802 MS.gene20067:CDS 50.0%
GCGGTATGAAAGGCGAAAGA+GGG - chr7.2:11028021-11028040 None:intergenic 50.0%
TCTTCCTCTCCCGAAAACGA+TGG - chr7.2:11026962-11026981 None:intergenic 50.0%
TTACCCGAAACTAGTCCTGC+CGG + chr7.2:11028151-11028170 MS.gene20067:CDS 50.0%
TTAGGTGGTGTCCTGGAATG+AGG + chr7.2:11027185-11027204 MS.gene20067:CDS 50.0%
TTCAGCTAACCCTCCTCTTC+AGG + chr7.2:11026655-11026674 MS.gene20067:CDS 50.0%
TTGCACCATTCCTCCTGCAA+CGG - chr7.2:11026273-11026292 None:intergenic 50.0%
TTTATAGGGGAACGCCGAAG+AGG + chr7.2:11026726-11026745 MS.gene20067:CDS 50.0%
TTTCGCCTTTCATACCGCCA+AGG + chr7.2:11028023-11028042 MS.gene20067:CDS 50.0%
! CCGCACCAACTTGTGCTTTT+TGG + chr7.2:11028409-11028428 MS.gene20067:CDS 50.0%
!! CACCGGTTCAATTGTAGAGC+TGG + chr7.2:11028778-11028797 MS.gene20067:CDS 50.0%
!! GTGATGGAATGATGGGTAGG+GGG + chr7.2:11027026-11027045 MS.gene20067:CDS 50.0%
AATCCTCCGTAAGGTGGTGC+AGG - chr7.2:11026938-11026957 None:intergenic 55.0%
AGAGTGTGGACCCTCAGCTA+TGG + chr7.2:11026243-11026262 MS.gene20067:CDS 55.0%
CAACGGCATGCCATAGCTGA+GGG - chr7.2:11026256-11026275 None:intergenic 55.0%
GGAGCCAGGCATGGTCATTT+CGG + chr7.2:11028181-11028200 MS.gene20067:CDS 55.0%
GGCGGTATGAAAGGCGAAAG+AGG - chr7.2:11028022-11028041 None:intergenic 55.0%
TGGTGCGGCTTTGCATGATC+CGG - chr7.2:11028397-11028416 None:intergenic 55.0%
TTCAGGCTGCTGATCCGTCA+TGG + chr7.2:11027275-11027294 MS.gene20067:CDS 55.0%
TTCCACTAGCGGCGCGAAAA+TGG + chr7.2:11028735-11028754 MS.gene20067:CDS 55.0%
! CATCAGATGTACGTGTCGGC+AGG - chr7.2:11028516-11028535 None:intergenic 55.0%
!! AACTCAGGAGTACCTGACCG+AGG - chr7.2:11027127-11027146 None:intergenic 55.0%
!! ATGCCGGCAGGACTAGTTTC+GGG - chr7.2:11028157-11028176 None:intergenic 55.0%
!! CACCGGTTCACATGCATGCT+CGG - chr7.2:11026342-11026361 None:intergenic 55.0%
!! CATGCCGGCAGGACTAGTTT+CGG - chr7.2:11028158-11028177 None:intergenic 55.0%
!! TGGAATGATGGGTAGGGGGA+AGG + chr7.2:11027030-11027049 MS.gene20067:CDS 55.0%
AACTAGTCCTGCCGGCATGC+AGG + chr7.2:11028159-11028178 MS.gene20067:CDS 60.0%
ACTAGTCCTGCCGGCATGCA+GGG + chr7.2:11028160-11028179 MS.gene20067:CDS 60.0%
CACTAGCGGCGCGAAAATGG+AGG + chr7.2:11028738-11028757 MS.gene20067:CDS 60.0%
CAGCTATGGCATGCCGTTGC+AGG + chr7.2:11026257-11026276 MS.gene20067:CDS 60.0%
CGCCGAGCATGCATGTGAAC+CGG + chr7.2:11026337-11026356 MS.gene20067:CDS 60.0%
CTATGGCATGCCGTTGCAGG+AGG + chr7.2:11026260-11026279 MS.gene20067:CDS 60.0%
GCAACGGCATGCCATAGCTG+AGG - chr7.2:11026257-11026276 None:intergenic 60.0%
GCATGCCGTTGCAGGAGGAA+TGG + chr7.2:11026265-11026284 MS.gene20067:CDS 60.0%
TGTCCTGCACCACCTTACGG+AGG + chr7.2:11026932-11026951 MS.gene20067:CDS 60.0%
! CTCCATTTTCGCGCCGCTAG+TGG - chr7.2:11028740-11028759 None:intergenic 60.0%
ATGCCTGGCTCCCTGCATGC+CGG - chr7.2:11028173-11028192 None:intergenic 65.0%
CATGCTCGGCGTGACCCTGA+GGG - chr7.2:11026328-11026347 None:intergenic 65.0%
GCATGCTCGGCGTGACCCTG+AGG - chr7.2:11026329-11026348 None:intergenic 70.0%
GGCATGCAGGGAGCCAGGCA+TGG + chr7.2:11028172-11028191 MS.gene20067:CDS 70.0%
CTGCCGGCATGCAGGGAGCC+AGG + chr7.2:11028167-11028186 MS.gene20067:CDS 75.0%
CTGGCTCCCTGCATGCCGGC+AGG - chr7.2:11028169-11028188 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 11026167 11028804 11026167 ID=MS.gene20067
chr7.2 mRNA 11026167 11028804 11026167 ID=MS.gene20067.t1;Parent=MS.gene20067
chr7.2 exon 11026167 11027324 11026167 ID=MS.gene20067.t1.exon1;Parent=MS.gene20067.t1
chr7.2 CDS 11026167 11027324 11026167 ID=cds.MS.gene20067.t1;Parent=MS.gene20067.t1
chr7.2 exon 11027932 11028610 11027932 ID=MS.gene20067.t1.exon2;Parent=MS.gene20067.t1
chr7.2 CDS 11027932 11028610 11027932 ID=cds.MS.gene20067.t1;Parent=MS.gene20067.t1
chr7.2 exon 11028695 11028804 11028695 ID=MS.gene20067.t1.exon3;Parent=MS.gene20067.t1
chr7.2 CDS 11028695 11028804 11028695 ID=cds.MS.gene20067.t1;Parent=MS.gene20067.t1
Gene Sequence

>MS.gene20067

ATGAAAGAAAAAAGAAAAGGTTGCAATCCAACTGAGATGAATATGGAGTCAAACAAAAAATTGAAAAATGTGAACAAGAGTGTGGACCCTCAGCTATGGCATGCCGTTGCAGGAGGAATGGTGCAAATGCCAGAAGTTAACTCACATGTTTTCTACTTCCCTCAGGGTCACGCCGAGCATGCATGTGAACCGGTGAATTTCAGTGCTTACTCCAAAATTCCGTCTTTCATTCCATGTAGAGTTGAAGCAATAAGATATATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATAATTAAGGATAAACATCAATCTTTTGCGAAAACCTTGACACAATCTGATGCAAACAATGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCAGAAACGCTTTTTCCTCGTTTGGACTATTCAGCTAACCCTCCTCTTCAGGATATTTTTCCCAAGGATGTTCATGGCGAAAAGTGGCATTTCAGGCACGTTTATAGGGGAACGCCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCTTTTGTCAGCGACAAGAAACTTGCGTCTGGGGATTCGATTGTGTTTTTGAGATCTGAAAACGGCGATCTTCATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCGATCCTTTGTTAGGGTGGAAATCTGGTAGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATCGTTTTCGGGAGAGGAAGATAATAAACTTCGAAGAAACGGTAAAGGTAATGGATTGCTAATAAGTGATGGAATGATGGGTAGGGGGAAGGTGAAAGCTCTAGAAGTTATTGAAGCAATAAAACTCGGTACTAATATGCAGCCGTTTGATGTGGTTTATTATCCTCGGTCAGGTACTCCTGAGTTTCTTGTGAAAACTTCTTTAATTGGAACAGCACTTCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGGCCATTGAAACTGAGGACTCATCAAGGATAAGTTGGTTTATCGGAACTATTGCTTCTGTTCAGGCTGCTGATCCGTCATGGTCTGATTCTATGTGGAGACTTCTCGAGGTATATACATGTTTATTATACACTCCCTCTAGAATTAATTTACTTGAGAATTTGTTTTATTGATGAATGTTTTGAGAATAATAACGGTAAATACAGTAAAGTTAGTTAGATTTTACTTATATTTTGGTCAACGTTGTCATATAGCAGCTATAGTGGCACTATATTGCTATGCCTTGTGGAATTTATACAAATCACTATTGTTCTACCATAGAATGTGTATTCTTGCAACATTTTCTTTTTCCAAAGCATAATCCTTTTAAGTTTTCATCAGTACCATAAATTGGAAGCTTCCTATTATTAGAATTTGCTAAAAATCCTATACCTACATCACTATCATACATTAGGTATCCCCGAGGGCCTTCACATATTTTACTTTGAATACATTCAAAATTTGCAAGTTAATGTATATATTTGTGTATGGTAATATAGATACAATGGAACATTGTTGGTACCTAATGAAATTGTAAGAAGAGAATTAGATTAGAATTTCATACTAATGAAATTCACAGTGTCCTTTTTATTGCATATATTACTATGTCATTTTGAATTACATTAATTTTGACCTTTGTTTCAGCCGTGAATGATTTTCTGATGTCATACTTTTTAGGTTACATGGGATGAACCTGAGATACTTAAAAATGTGAAAAGAGTGAATCCGTGGCAAGTTGAAATAGTATCGAACATGCCTTCGATCCCTCTTTCGCCTTTCATACCGCCAAGGAAGAAATTGAGATTACCTCAACTCCCAGATTTCCCAATTGATGGCCAATTTCCAATGCCAACTTTTCCAAACAACCTTCTAAATCCTAATATTCCAATTTTTTATTTACCCGAAACTAGTCCTGCCGGCATGCAGGGAGCCAGGCATGGTCATTTCGGTCTTACCTTACCAGATTTTCATAATCTTCCATTAGGTCTCTTTCAGCCTAGTTTCCAACAACCGTTTAATAATAATATTGCGACGATGCCGATGACTGTCCCTAATAACTTGGCATTGCAAAAGCCGAACACCAGTGAGAACATTTCATGCTCGCATTCGATATCAACTTCTGCACAATCTTCAGAGAAACCGGATCATGCAAAGCCGCACCAACTTGTGCTTTTTGGCCAAACAATACAAGTCGACACTGGAAATGAGAATTCCGAGAAGAAAATGACTAATCATTTGTCTGATTTTCATCTACAAAGCCTGCCGACACGTACATCTGATGAGAGGTTCGAGTGGAATGCTAAGAACCAATGCGAAGAAACATTCGCAGGAGAAACATTAGAGATGAAACATTCAGGTAAGAATGAATAAAATTCAGTATCTTTCTACTAGAAATTGATTTATGATATATGATAATAACTTATTTGTCTCTCTTTCAGAGACTTCATCAGAAAAGCTAGGAGGTTGACAATTTTAATGGATTCCACTAGCGGCGCGAAAATGGAGGATCAGCAAGAAAAAAACCACCGGTTCAATTGTAGAGCTGGATGA
Protein sequence

>MS.gene20067.t1

MKEKRKGCNPTEMNMESNKKLKNVNKSVDPQLWHAVAGGMVQMPEVNSHVFYFPQGHAEHACEPVNFSAYSKIPSFIPCRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIIKDKHQSFAKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLLGWKSGSGIGICPAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAIKLGTNMQPFDVVYYPRSGTPEFLVKTSLIGTALQIRWCPGMRFKMAIETEDSSRISWFIGTIASVQAADPSWSDSMWRLLEVTWDEPEILKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQLPDFPIDGQFPMPTFPNNLLNPNIPIFYLPETSPAGMQGARHGHFGLTLPDFHNLPLGLFQPSFQQPFNNNIATMPMTVPNNLALQKPNTSENISCSHSISTSAQSSEKPDHAKPHQLVLFGQTIQVDTGNENSEKKMTNHLSDFHLQSLPTRTSDERFEWNAKNQCEETFAGETLEMKHSDFIRKARRLTILMDSTSGAKMEDQQEKNHRFNCRAG