AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20447

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20447.t1 MTR_6g011860 96.570 379 10 2 1 377 1 378 0.0 759
MS.gene20447.t1 MTR_8g467490 50.895 391 169 11 1 377 1 382 5.36e-119 350
MS.gene20447.t1 MTR_5g040420 71.171 222 55 7 1 220 1 215 9.22e-107 319
MS.gene20447.t1 MTR_2g068880 56.842 190 70 5 1 179 3 191 1.92e-68 218
MS.gene20447.t1 MTR_5g090970 56.983 179 65 3 7 174 1 178 6.99e-67 214
MS.gene20447.t1 MTR_2g068920 44.366 284 114 10 1 270 3 256 2.38e-66 212
MS.gene20447.t1 MTR_5g090970 56.425 179 65 3 7 174 1 177 4.45e-66 212
MS.gene20447.t1 MTR_4g089135 52.910 189 67 6 15 185 15 199 1.54e-59 196
MS.gene20447.t1 MTR_2g080010 53.293 167 74 4 14 177 14 179 3.63e-59 196
MS.gene20447.t1 MTR_7g085220 54.706 170 63 5 14 175 7 170 1.03e-57 191
MS.gene20447.t1 MTR_4g134460 53.374 163 64 3 13 175 52 202 2.03e-57 193
MS.gene20447.t1 MTR_2g064090 54.321 162 64 4 15 175 6 158 3.89e-55 185
MS.gene20447.t1 MTR_2g093810 49.721 179 83 3 17 194 16 188 4.54e-55 184
MS.gene20447.t1 MTR_2157s0010 50.000 172 81 4 15 183 8 177 1.03e-54 181
MS.gene20447.t1 MTR_5g012080 45.128 195 95 2 9 201 1 185 1.38e-54 183
MS.gene20447.t1 MTR_5g041940 49.714 175 81 4 14 188 2 169 3.91e-54 179
MS.gene20447.t1 MTR_3g088110 49.162 179 76 4 15 187 7 176 1.20e-53 179
MS.gene20447.t1 MTR_8g094580 50.877 171 64 4 14 178 6 162 1.25e-53 179
MS.gene20447.t1 MTR_3g096920 51.205 166 72 3 14 179 6 162 1.41e-52 176
MS.gene20447.t1 MTR_4g081870 50.282 177 81 4 7 183 1 170 1.53e-52 176
MS.gene20447.t1 MTR_6g477900 49.412 170 75 3 15 183 6 165 2.95e-52 174
MS.gene20447.t1 MTR_2g079990 52.147 163 67 3 15 177 16 167 3.19e-52 177
MS.gene20447.t1 MTR_5g021710 46.286 175 80 4 17 189 10 172 5.27e-52 177
MS.gene20447.t1 MTR_7g100990 51.205 166 70 4 15 177 11 168 1.21e-51 175
MS.gene20447.t1 MTR_4g036030 47.619 168 74 4 9 174 1 156 2.41e-51 175
MS.gene20447.t1 MTR_3g064580 50.000 166 73 3 15 179 6 162 2.46e-51 182
MS.gene20447.t1 MTR_5g076850 50.303 165 71 3 15 178 6 160 6.04e-51 180
MS.gene20447.t1 MTR_8g059170 52.147 163 69 3 15 177 14 167 6.34e-51 173
MS.gene20447.t1 MTR_4g101680 45.198 177 81 4 9 183 1 163 1.62e-50 173
MS.gene20447.t1 MTR_8g076110 46.341 164 74 4 17 178 8 159 1.68e-50 172
MS.gene20447.t1 MTR_4g108760 49.390 164 74 3 14 177 16 170 4.40e-50 172
MS.gene20447.t1 MTR_2g062730 45.029 171 81 3 17 185 12 171 4.64e-50 171
MS.gene20447.t1 MTR_4g075980 47.541 183 78 5 16 195 16 183 6.32e-50 170
MS.gene20447.t1 MTR_2g079990 47.253 182 75 3 15 177 16 195 9.39e-50 172
MS.gene20447.t1 MTR_3g096920 57.778 135 54 2 14 148 6 137 3.74e-49 169
MS.gene20447.t1 MTR_2g078700 51.807 166 67 4 15 177 23 178 4.69e-49 170
MS.gene20447.t1 MTR_8g024480 42.703 185 99 4 1 181 1 182 4.73e-49 171
MS.gene20447.t1 MTR_5g014300 49.102 167 66 4 15 174 6 160 4.89e-49 169
MS.gene20447.t1 MTR_4g035590 50.000 162 66 4 17 176 10 158 6.67e-49 169
MS.gene20447.t1 MTR_3g435150 47.594 187 84 5 15 201 16 188 7.81e-49 167
MS.gene20447.t1 MTR_6g032770 47.514 181 81 6 1 176 1 172 2.19e-48 168
MS.gene20447.t1 MTR_6g012670 50.920 163 71 4 14 176 19 172 4.04e-48 166
MS.gene20447.t1 MTR_6g084430 42.723 213 101 5 13 217 3 202 7.04e-48 165
MS.gene20447.t1 MTR_7g085260 47.977 173 77 4 14 182 16 179 2.50e-47 165
MS.gene20447.t1 MTR_3g109340 48.023 177 77 4 3 177 10 173 8.29e-47 163
MS.gene20447.t1 MTR_3g109340 47.753 178 77 4 3 177 10 174 1.16e-46 163
MS.gene20447.t1 MTR_1g096430 45.198 177 80 5 17 191 9 170 1.53e-46 162
MS.gene20447.t1 MTR_3g096140 46.584 161 75 4 15 174 7 157 3.90e-46 159
MS.gene20447.t1 MTR_3g096140 46.584 161 75 4 15 174 7 157 2.55e-45 159
MS.gene20447.t1 MTR_2g064470 49.697 165 71 5 15 179 11 163 4.63e-45 157
MS.gene20447.t1 MTR_4g098630 48.466 163 72 3 15 174 6 159 5.63e-45 157
MS.gene20447.t1 MTR_1g097300 57.364 129 51 3 16 142 20 146 7.94e-45 162
MS.gene20447.t1 MTR_7g005280 46.067 178 80 4 1 177 1 163 1.02e-44 155
MS.gene20447.t1 MTR_7g011130 47.879 165 78 5 18 176 22 184 1.39e-44 157
MS.gene20447.t1 MTR_3g070030 47.205 161 73 4 18 176 22 172 1.55e-44 157
MS.gene20447.t1 MTR_7g011120 47.853 163 77 4 17 176 10 167 3.45e-44 155
MS.gene20447.t1 MTR_8g063550 45.122 164 79 5 12 174 3 156 3.91e-44 155
MS.gene20447.t1 MTR_5g069030 45.402 174 84 3 2 174 12 175 6.59e-44 161
MS.gene20447.t1 MTR_8g063550 44.242 165 81 4 11 174 2 156 9.92e-44 157
MS.gene20447.t1 MTR_8g063550 45.342 161 77 4 15 174 6 156 1.09e-43 157
MS.gene20447.t1 MTR_1g008740 41.294 201 94 6 2 189 10 199 1.31e-43 155
MS.gene20447.t1 MTR_1g008740 42.564 195 90 6 6 189 2 185 2.60e-43 154
MS.gene20447.t1 MTR_3g116070 46.821 173 73 5 15 185 23 178 4.11e-43 153
MS.gene20447.t1 MTR_1g090720 47.239 163 81 3 15 176 42 200 4.16e-43 156
MS.gene20447.t1 MTR_8g099750 44.785 163 82 3 10 171 9 164 7.55e-42 146
MS.gene20447.t1 MTR_1g069805 36.017 236 133 6 15 249 10 228 8.96e-42 148
MS.gene20447.t1 MTR_8g093580 43.478 161 80 4 15 174 6 156 1.48e-41 152
MS.gene20447.t1 MTR_3g093050 43.275 171 86 3 7 176 14 174 5.23e-41 152
MS.gene20447.t1 MTR_3g093050 43.275 171 86 3 7 176 14 174 6.79e-41 152
MS.gene20447.t1 MTR_2g086880 33.333 282 160 9 1 280 5 260 2.61e-39 147
MS.gene20447.t1 MTR_2g086880 34.328 268 149 8 15 280 18 260 3.48e-39 147
MS.gene20447.t1 MTR_3g093040 42.593 162 78 5 18 176 111 260 3.59e-39 142
MS.gene20447.t1 MTR_7g097090 43.396 159 75 4 15 172 10 154 8.50e-39 140
MS.gene20447.t1 MTR_4g052620 39.691 194 103 5 13 201 3 187 1.42e-38 139
MS.gene20447.t1 MTR_1g090723 40.782 179 92 6 17 192 10 177 1.93e-38 145
MS.gene20447.t1 MTR_3g098810 42.135 178 94 4 3 177 2 173 5.41e-38 137
MS.gene20447.t1 MTR_2g086690 34.914 232 132 8 12 231 1 225 5.52e-38 137
MS.gene20447.t1 MTR_1g090723 39.560 182 89 6 17 192 10 176 7.38e-38 144
MS.gene20447.t1 MTR_1g090723 39.560 182 89 6 17 192 10 176 9.86e-38 143
MS.gene20447.t1 MTR_0036s0150 42.945 163 80 4 17 177 7 158 2.44e-37 141
MS.gene20447.t1 MTR_3g098810 46.154 143 71 2 3 142 2 141 1.19e-35 129
MS.gene20447.t1 MTR_3g096140 43.448 145 71 4 31 174 2 136 1.76e-35 132
MS.gene20447.t1 MTR_7g105170 37.209 172 99 4 12 178 1 168 1.88e-35 130
MS.gene20447.t1 MTR_8g023840 48.905 137 66 4 14 147 10 145 6.34e-35 132
MS.gene20447.t1 MTR_3g070040 41.615 161 78 5 19 176 12 159 8.36e-33 125
MS.gene20447.t1 MTR_8g094580 48.760 121 43 3 64 178 1 108 9.41e-33 122
MS.gene20447.t1 MTR_8g023860 46.617 133 67 4 12 141 9 140 1.66e-31 124
MS.gene20447.t1 MTR_8g023900 37.500 168 88 6 12 175 8 162 6.90e-29 117
MS.gene20447.t1 MTR_8g023900 38.750 160 80 5 18 174 196 340 1.07e-27 114
MS.gene20447.t1 MTR_8g023930 37.952 166 84 6 14 175 22 172 1.09e-27 114
MS.gene20447.t1 MTR_4g094302 37.267 161 88 5 15 174 11 159 4.51e-24 98.6
MS.gene20447.t1 MTR_4g094302 39.535 129 68 3 15 142 11 130 1.07e-22 93.6
MS.gene20447.t1 MTR_8g023880 34.031 191 84 10 16 187 7 174 1.25e-19 88.2
MS.gene20447.t1 MTR_8g093790 33.533 167 76 8 15 179 10 143 1.89e-18 82.8
MS.gene20447.t1 MTR_7g083330 34.109 129 81 3 18 145 21 146 1.98e-18 82.8
MS.gene20447.t1 MTR_7g070140 43.678 87 46 2 69 154 17 101 5.92e-18 80.1
MS.gene20447.t1 MTR_7g083370 34.615 130 77 4 14 140 9 133 1.62e-17 79.0
MS.gene20447.t1 MTR_7g083360 33.333 135 86 3 14 147 9 140 2.15e-17 79.0
MS.gene20447.t1 MTR_3g096400 30.435 161 103 4 15 173 7 160 1.06e-16 78.6
MS.gene20447.t1 MTR_1g087190 63.043 46 16 1 17 61 7 52 2.47e-13 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20447.t1 AT1G26870 59.191 272 101 7 1 265 1 269 1.21e-95 291
MS.gene20447.t1 AT5G39820 64.706 204 56 6 1 190 5 206 1.56e-90 276
MS.gene20447.t1 AT2G43000 61.111 162 53 3 16 177 19 170 1.75e-70 222
MS.gene20447.t1 AT3G15510 49.246 199 91 6 19 210 21 216 1.14e-58 194
MS.gene20447.t1 AT3G12910 56.805 169 64 4 16 177 22 188 1.16e-58 192
MS.gene20447.t1 AT2G02450 53.750 160 62 3 15 174 51 198 7.90e-58 194
MS.gene20447.t1 AT2G02450 53.750 160 62 3 15 174 51 198 8.27e-58 193
MS.gene20447.t1 AT1G61110 53.614 166 73 3 15 177 16 180 1.33e-57 191
MS.gene20447.t1 AT3G04070 53.672 177 72 5 15 185 10 182 4.74e-57 190
MS.gene20447.t1 AT4G27410 53.988 163 64 3 15 177 14 165 1.77e-54 182
MS.gene20447.t1 AT3G04070 48.705 193 73 5 15 185 10 198 2.08e-54 183
MS.gene20447.t1 AT1G69490 49.143 175 82 4 7 181 1 168 7.10e-54 179
MS.gene20447.t1 AT3G17730 51.479 169 71 3 15 182 6 164 7.50e-54 178
MS.gene20447.t1 AT1G01720 52.071 169 73 4 9 177 1 161 4.12e-53 178
MS.gene20447.t1 AT5G17260 52.795 161 66 4 15 174 6 157 4.71e-53 183
MS.gene20447.t1 AT5G08790 50.909 165 74 3 14 178 6 163 7.67e-53 177
MS.gene20447.t1 AT3G15500 52.326 172 71 3 6 177 5 165 1.00e-52 177
MS.gene20447.t1 AT3G03200 52.174 161 67 4 15 174 6 157 1.45e-52 182
MS.gene20447.t1 AT1G52890 51.705 176 69 4 7 177 1 165 1.86e-52 177
MS.gene20447.t1 AT1G65910 51.875 160 66 3 17 175 8 157 3.76e-52 183
MS.gene20447.t1 AT4G27410 49.162 179 65 3 15 177 14 182 1.07e-51 175
MS.gene20447.t1 AT5G63790 50.303 165 75 3 14 178 49 206 1.29e-51 174
MS.gene20447.t1 AT5G61430 50.617 162 71 3 14 175 15 167 1.55e-51 175
MS.gene20447.t1 AT5G63790 50.303 165 75 3 14 178 59 216 1.62e-51 175
MS.gene20447.t1 AT2G17040 48.555 173 72 4 13 183 4 161 1.75e-51 173
MS.gene20447.t1 AT4G36160 48.750 160 68 4 17 174 12 159 1.77e-51 176
MS.gene20447.t1 AT4G36160 48.750 160 68 4 17 174 12 159 1.77e-51 176
MS.gene20447.t1 AT4G36160 48.750 160 68 4 17 174 16 163 2.20e-51 176
MS.gene20447.t1 AT2G18060 48.750 160 68 4 17 174 11 158 2.71e-51 175
MS.gene20447.t1 AT2G18060 48.750 160 68 4 17 174 11 158 2.71e-51 175
MS.gene20447.t1 AT1G12260 48.521 169 71 5 9 174 1 156 3.42e-51 174
MS.gene20447.t1 AT1G77450 50.617 162 71 3 17 178 12 164 4.24e-51 171
MS.gene20447.t1 AT3G04060 50.000 164 74 2 11 174 16 171 4.82e-51 174
MS.gene20447.t1 AT4G10350 48.837 172 76 3 17 186 11 172 5.66e-51 174
MS.gene20447.t1 AT1G12260 48.521 169 71 5 9 174 1 156 5.88e-51 175
MS.gene20447.t1 AT5G18270 48.521 169 79 2 14 182 20 180 8.25e-51 173
MS.gene20447.t1 AT5G62380 49.689 161 65 5 17 174 9 156 1.08e-50 173
MS.gene20447.t1 AT5G62380 49.689 161 65 5 17 174 9 156 1.08e-50 173
MS.gene20447.t1 AT5G39610 43.541 209 103 5 14 219 19 215 1.68e-50 171
MS.gene20447.t1 AT4G17980 51.235 162 70 3 15 174 6 160 2.39e-50 170
MS.gene20447.t1 AT5G07680 50.000 162 72 3 14 175 2 154 3.11e-50 171
MS.gene20447.t1 AT4G17980 51.235 162 70 3 15 174 6 160 3.36e-50 170
MS.gene20447.t1 AT5G18270 47.929 169 80 2 14 182 20 180 3.49e-50 172
MS.gene20447.t1 AT5G07680 50.000 162 72 3 14 175 16 168 3.62e-50 171
MS.gene20447.t1 AT1G76420 48.187 193 80 6 2 193 15 188 4.20e-50 171
MS.gene20447.t1 AT3G18400 49.102 167 69 4 13 177 3 155 1.60e-49 169
MS.gene20447.t1 AT5G66300 44.828 174 83 4 17 188 14 176 1.82e-49 168
MS.gene20447.t1 AT1G52880 52.381 168 67 4 19 179 21 182 2.06e-49 169
MS.gene20447.t1 AT1G62700 48.521 169 71 5 9 174 1 156 2.19e-49 171
MS.gene20447.t1 AT1G62700 48.521 169 71 5 9 174 1 156 2.19e-49 171
MS.gene20447.t1 AT1G33280 51.235 162 64 4 17 176 10 158 1.29e-48 167
MS.gene20447.t1 AT1G54330 51.553 161 64 4 15 174 6 153 2.02e-48 166
MS.gene20447.t1 AT1G56010 49.714 175 78 6 2 174 5 171 2.47e-48 166
MS.gene20447.t1 AT2G24430 48.193 166 74 3 13 177 14 168 4.85e-48 166
MS.gene20447.t1 AT2G24430 48.193 166 74 3 13 177 14 168 4.85e-48 166
MS.gene20447.t1 AT2G46770 40.609 197 100 5 1 188 2 190 5.45e-48 167
MS.gene20447.t1 AT3G15170 45.498 211 100 6 13 219 17 216 7.59e-48 165
MS.gene20447.t1 AT1G32770 43.258 178 97 3 2 176 3 179 7.28e-47 164
MS.gene20447.t1 AT5G46590 48.447 161 74 3 15 174 6 158 8.02e-47 161
MS.gene20447.t1 AT5G46590 53.676 136 61 2 15 149 6 140 1.11e-46 161
MS.gene20447.t1 AT1G71930 43.158 190 85 7 12 193 1 175 1.54e-46 162
MS.gene20447.t1 AT1G71930 43.158 190 85 7 12 193 1 175 1.54e-46 162
MS.gene20447.t1 AT3G10500 48.256 172 78 4 7 177 1 162 1.58e-46 167
MS.gene20447.t1 AT5G53950 52.439 164 65 4 15 175 17 170 1.62e-46 163
MS.gene20447.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.73e-46 162
MS.gene20447.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.73e-46 162
MS.gene20447.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.73e-46 162
MS.gene20447.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.73e-46 162
MS.gene20447.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.73e-46 162
MS.gene20447.t1 AT3G29035 57.364 129 53 2 14 142 23 149 8.12e-46 160
MS.gene20447.t1 AT1G32510 40.351 228 106 8 15 235 6 210 1.00e-45 158
MS.gene20447.t1 AT5G13180 47.929 169 73 3 10 177 9 163 1.37e-45 157
MS.gene20447.t1 AT3G10480 47.239 163 75 3 15 176 27 179 1.64e-45 162
MS.gene20447.t1 AT5G04410 43.316 187 95 4 7 192 1 177 2.11e-45 164
MS.gene20447.t1 AT3G10490 46.626 163 77 3 15 176 27 180 2.26e-45 156
MS.gene20447.t1 AT3G12977 40.444 225 118 7 3 222 5 218 6.58e-45 156
MS.gene20447.t1 AT3G10480 47.239 163 76 4 15 176 27 180 6.63e-45 160
MS.gene20447.t1 AT3G61910 40.556 180 92 4 7 176 3 177 7.43e-45 157
MS.gene20447.t1 AT3G10490 46.626 163 77 3 15 176 27 180 8.30e-44 157
MS.gene20447.t1 AT1G34190 47.239 163 73 4 17 177 18 169 8.49e-44 159
MS.gene20447.t1 AT5G24590 44.253 174 87 2 4 176 2 166 1.18e-43 157
MS.gene20447.t1 AT2G33480 44.633 177 84 4 1 177 1 163 8.27e-43 150
MS.gene20447.t1 AT2G27300 40.909 176 86 4 1 176 1 158 2.49e-42 151
MS.gene20447.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.56e-42 154
MS.gene20447.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.56e-42 154
MS.gene20447.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.56e-42 154
MS.gene20447.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.56e-42 154
MS.gene20447.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.56e-42 154
MS.gene20447.t1 AT3G49530 35.931 231 128 5 7 227 5 225 4.77e-42 152
MS.gene20447.t1 AT1G34180 54.331 127 56 2 17 142 18 143 6.00e-42 152
MS.gene20447.t1 AT3G49530 39.320 206 105 5 7 202 5 200 1.12e-41 152
MS.gene20447.t1 AT4G35580 45.882 170 79 5 7 174 1 159 1.13e-41 153
MS.gene20447.t1 AT4G35580 45.882 170 79 5 7 174 1 159 1.26e-41 153
MS.gene20447.t1 AT4G35580 45.882 170 79 5 7 174 1 159 1.30e-41 153
MS.gene20447.t1 AT1G33060 43.103 174 88 3 2 174 11 174 1.43e-41 154
MS.gene20447.t1 AT1G33060 43.103 174 88 3 2 174 11 174 1.60e-41 154
MS.gene20447.t1 AT1G34180 54.331 127 56 2 17 142 18 143 2.15e-41 153
MS.gene20447.t1 AT2G33480 44.633 177 82 5 1 177 1 161 4.22e-41 145
MS.gene20447.t1 AT3G10480 39.796 196 75 4 15 176 27 213 6.93e-41 151
MS.gene20447.t1 AT5G64060 41.975 162 83 3 14 174 5 156 3.06e-40 146
MS.gene20447.t1 AT1G34180 49.640 139 56 2 17 142 18 155 3.71e-40 148
MS.gene20447.t1 AT1G34180 49.640 139 56 2 17 142 18 155 1.21e-39 148
MS.gene20447.t1 AT4G28530 42.623 183 74 6 15 180 10 178 1.86e-39 144
MS.gene20447.t1 AT5G22290 40.764 157 77 3 15 171 21 161 9.34e-39 142
MS.gene20447.t1 AT3G44290 39.306 173 87 3 12 183 11 166 4.54e-38 137
MS.gene20447.t1 AT3G44290 39.634 164 82 2 12 175 11 157 1.93e-37 138
MS.gene20447.t1 AT5G04395 42.236 161 77 5 15 160 28 187 5.39e-35 127
MS.gene20447.t1 AT1G32870 43.503 177 89 5 15 190 10 176 4.87e-34 132
MS.gene20447.t1 AT1G32870 43.503 177 89 5 15 190 10 176 5.88e-34 132
MS.gene20447.t1 AT1G32870 42.105 190 98 6 3 190 33 212 7.10e-34 132
MS.gene20447.t1 AT2G43000 57.000 100 34 2 78 177 2 92 7.11e-33 122
MS.gene20447.t1 AT5G61430 50.000 112 48 2 64 175 1 104 9.82e-33 124
MS.gene20447.t1 AT1G56010 51.351 111 47 3 64 174 1 104 3.08e-31 119
MS.gene20447.t1 AT3G44350 35.503 169 97 3 13 177 3 163 3.75e-31 119
MS.gene20447.t1 AT5G22380 37.209 172 94 6 12 177 2 165 1.05e-30 117
MS.gene20447.t1 AT3G12977 39.264 163 87 3 63 222 12 165 1.39e-30 117
MS.gene20447.t1 AT4G10350 46.774 124 56 2 63 186 12 125 1.69e-30 118
MS.gene20447.t1 AT3G44350 37.241 145 87 2 13 153 3 147 1.39e-29 112
MS.gene20447.t1 AT4G01550 43.478 138 73 4 12 145 2 138 5.03e-28 114
MS.gene20447.t1 AT5G64530 39.645 169 83 6 15 177 3 158 2.71e-26 104
MS.gene20447.t1 AT5G64530 42.748 131 61 4 14 143 2 119 6.36e-26 102
MS.gene20447.t1 AT4G01520 42.537 134 70 5 18 145 7 139 7.92e-26 105
MS.gene20447.t1 AT4G01540 42.537 134 70 5 18 145 7 139 4.89e-25 105
MS.gene20447.t1 AT4G01540 42.537 134 70 5 18 145 7 139 5.47e-25 105
MS.gene20447.t1 AT4G01540 42.537 134 70 5 18 145 7 139 5.94e-25 105
MS.gene20447.t1 AT4G01540 42.537 134 70 5 18 145 7 139 6.39e-25 105
MS.gene20447.t1 AT4G28530 45.370 108 42 3 15 106 10 116 6.87e-21 92.4
MS.gene20447.t1 AT2G33480 42.202 109 53 3 69 177 8 106 8.62e-21 90.1
MS.gene20447.t1 AT1G02230 39.850 133 72 4 18 145 6 135 8.94e-21 92.8
MS.gene20447.t1 AT2G18060 51.852 81 27 3 94 174 2 70 2.15e-20 90.5
MS.gene20447.t1 AT1G02250 40.625 128 68 5 18 140 6 130 2.42e-20 91.7
MS.gene20447.t1 AT3G04420 38.095 126 74 3 18 140 6 130 5.51e-20 89.7
MS.gene20447.t1 AT3G04420 38.095 126 74 3 18 140 6 130 2.06e-19 88.6
MS.gene20447.t1 AT1G01010 31.004 229 128 7 18 236 6 214 3.49e-19 89.0
MS.gene20447.t1 AT3G04430 37.879 132 70 3 21 141 6 136 2.11e-18 83.2
MS.gene20447.t1 AT3G55210 30.220 182 94 6 15 180 11 175 1.60e-17 82.4
MS.gene20447.t1 AT5G14000 30.921 152 99 3 1 150 1 148 4.62e-17 78.2
MS.gene20447.t1 AT5G14000 27.568 185 116 4 1 183 1 169 7.70e-17 79.0
MS.gene20447.t1 AT1G02220 38.095 126 71 4 18 140 6 127 1.82e-16 80.5
MS.gene20447.t1 AT3G56530 32.593 135 88 2 17 149 54 187 6.29e-16 78.2
MS.gene20447.t1 AT3G10490 40.909 88 43 2 89 176 2 80 8.53e-15 75.5
MS.gene20447.t1 AT3G10490 40.909 88 43 2 89 176 2 80 8.53e-15 75.5
MS.gene20447.t1 AT5G50820 32.331 133 74 5 15 142 17 138 1.30e-13 69.3
MS.gene20447.t1 AT5G22290 40.260 77 30 3 95 171 2 62 1.14e-11 64.7

Find 69 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGGAATTTGTGAGGATT+TGG 0.247261 6.3:-6545462 None:intergenic
TAACCATGCTTCCTGGTAAC+TGG 0.259108 6.3:-6544756 None:intergenic
CTTTCCAACACAAACTATAT+TGG 0.265576 6.3:+6545572 MS.gene20447:CDS
GAGTTACAAGAGCTGGATTT+TGG 0.268455 6.3:+6543947 MS.gene20447:CDS
GAAGTCACTTGTCTTCTATA+AGG 0.296503 6.3:+6544029 MS.gene20447:CDS
CTTCAAGTGTGTAGAACATT+AGG 0.306455 6.3:-6545508 None:intergenic
CCAGCTCTTGTAACTCTATT+AGG 0.312453 6.3:-6543940 None:intergenic
TTGTTGATAGGTTTGTAATT+TGG 0.312973 6.3:-6545425 None:intergenic
GATGCAAATAATCAATATAA+TGG 0.359002 6.3:+6545602 MS.gene20447:CDS
TTTCCATCTGATGAGTATAT+AGG 0.364565 6.3:-6543991 None:intergenic
TCACAAATTCCTGTTCCTAA+TGG 0.378078 6.3:+6545470 MS.gene20447:CDS
TCTTGAATATTCACAACGTT+TGG 0.381035 6.3:-6545656 None:intergenic
ACTTGCTTAATAAGTTCAAT+AGG 0.383211 6.3:-6543256 None:intergenic
CCCACAGATGAAGAGCTTGT+TGG 0.384548 6.3:+6543196 MS.gene20447:CDS
ATCATCAATTGTGCACTTTG+TGG 0.389954 6.3:-6545540 None:intergenic
TTGTACCATGGAAAGGGAAT+TGG 0.393283 6.3:-6544707 None:intergenic
ATTGGATGATGCATGAGTTT+AGG 0.393794 6.3:+6544079 MS.gene20447:CDS
AATTCATTAACCATGCTTCC+TGG 0.399214 6.3:-6544763 None:intergenic
CTTAATCAATGGGAAAATCT+TGG 0.415172 6.3:+6545689 MS.gene20447:CDS
GTCCTCAAAGCATCAAAACT+TGG 0.429523 6.3:-6545743 None:intergenic
GGAAGGCAACTGGAACTGAT+AGG 0.433013 6.3:+6543968 MS.gene20447:CDS
ATCAAATGCAGCTTAATCAA+TGG 0.439366 6.3:+6545678 MS.gene20447:CDS
ATTGTGTTGATGTTGTTGAT+AGG 0.466813 6.3:-6545437 None:intergenic
AAGTCACTTGTCTTCTATAA+GGG 0.469878 6.3:+6544030 MS.gene20447:CDS
AAGGTTGATGATTTGATGCC+TGG 0.470160 6.3:+6543160 MS.gene20447:CDS
TCAAATGCAGCTTAATCAAT+GGG 0.472008 6.3:+6545679 MS.gene20447:CDS
AAAACCAATATAGTTTGTGT+TGG 0.476473 6.3:-6545576 None:intergenic
CCTAATAGAGTTACAAGAGC+TGG 0.479097 6.3:+6543940 MS.gene20447:CDS
ATAATGTCTCCATTAGGAAC+AGG 0.480950 6.3:-6545479 None:intergenic
TTATCAATAATGTCTCCATT+AGG 0.481250 6.3:-6545485 None:intergenic
AAACTTGGAGACAAATTGAA+TGG 0.481553 6.3:-6545728 None:intergenic
TATAAGAATTCTTACTTGGA+AGG 0.484332 6.3:-6543306 None:intergenic
TTCTTACTTGGAAGGTCCCA+TGG 0.492827 6.3:-6543298 None:intergenic
CCTTGGATCTCCCAGTTACC+AGG 0.495317 6.3:+6544745 MS.gene20447:CDS
CCAAAGGGATGAAAACTGAT+TGG 0.497200 6.3:+6544061 MS.gene20447:CDS
AACCATGCTTCCTGGTAACT+GGG 0.505975 6.3:-6544755 None:intergenic
AAAATCTGAAGCTGAGAAGT+TGG 0.514553 6.3:-6545402 None:intergenic
ACCAACAAGCTCTTCATCTG+TGG 0.517278 6.3:-6543197 None:intergenic
TATTGAACTTATTAAGCAAG+TGG 0.518925 6.3:+6543258 MS.gene20447:CDS
GAAAACCAATTCCCTTTCCA+TGG 0.519977 6.3:+6544702 MS.gene20447:CDS
TCATCAGATGGAAAATGCAT+TGG 0.527545 6.3:+6544000 MS.gene20447:CDS
TGTGCACTTTGTGGAACCAT+TGG 0.528605 6.3:-6545531 None:intergenic
AGGATTCATGGGCAATCTGT+AGG 0.535758 6.3:+6544671 MS.gene20447:intron
TGAAGCTGAGAAGTTGGCAT+TGG 0.539735 6.3:-6545396 None:intergenic
GTGGGATGAAAACGAAAGCC+AGG 0.544940 6.3:-6543178 None:intergenic
AATGGTATTTCTATTGTCCA+AGG 0.545816 6.3:+6543890 MS.gene20447:CDS
ATATTTACAAACATGATCCA+TGG 0.555585 6.3:+6543281 MS.gene20447:CDS
ACGTTTGGTTGCATATCTTG+AGG 0.556521 6.3:-6545641 None:intergenic
CCTGGTAACTGGGAGATCCA+AGG 0.558240 6.3:-6544745 None:intergenic
CATGGAGGAAAGAACTGAGA+TGG 0.565541 6.3:+6543129 None:intergenic
CTGGTAACTGGGAGATCCAA+GGG 0.568030 6.3:-6544744 None:intergenic
CTCCCAGTTACCAGGAAGCA+TGG 0.571720 6.3:+6544753 MS.gene20447:CDS
TATTTACAAACATGATCCAT+GGG 0.576790 6.3:+6543282 MS.gene20447:CDS
TTCTACACACTTGAAGCCAA+TGG 0.578960 6.3:+6545515 MS.gene20447:CDS
AGGCCTATATACTCATCAGA+TGG 0.580727 6.3:+6543988 MS.gene20447:CDS
CAAGAAGAGCTAGCAAGTAG+TGG 0.581972 6.3:+6543859 MS.gene20447:intron
CTTTGAGGACTAGTGTCACA+TGG 0.584308 6.3:+6545756 MS.gene20447:CDS
ACAGAACATGGATCATCAGC+AGG 0.584566 6.3:+6544847 MS.gene20447:CDS
CCAACAAGCTCTTCATCTGT+GGG 0.588377 6.3:-6543196 None:intergenic
TCATGCACAACAACAGAACA+TGG 0.600328 6.3:+6544835 MS.gene20447:CDS
ATAAGGGTAGAGCTGCCAAA+GGG 0.609579 6.3:+6544046 MS.gene20447:CDS
GTGGACATTTAACTAGTGCA+AGG 0.616121 6.3:-6545788 None:intergenic
ATGGTATTTCTATTGTCCAA+GGG 0.621463 6.3:+6543891 MS.gene20447:CDS
ATTAGGAACAGGAATTTGTG+AGG 0.633156 6.3:-6545468 None:intergenic
AACTGAGATGGATATTAACA+AGG 0.642088 6.3:+6543141 MS.gene20447:CDS
TATAAGGGTAGAGCTGCCAA+AGG 0.669349 6.3:+6544045 MS.gene20447:CDS
TTTGAGGACTAGTGTCACAT+GGG 0.697215 6.3:+6545757 MS.gene20447:CDS
GTGTTTGAATCTGAAATGCA+TGG 0.704846 6.3:-6544105 None:intergenic
GACATTTAACTAGTGCAAGG+TGG 0.757546 6.3:-6545785 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGAATAAAAAATTTGTA+GGG - chr6.3:6543484-6543503 None:intergenic 10.0%
!!! ATTTAATGGATAAAATTATT+AGG - chr6.3:6545343-6545362 None:intergenic 10.0%
!!! TATCTAGAAATTTTATTAAA+TGG - chr6.3:6544282-6544301 None:intergenic 10.0%
!! AATATTAGAAAAAGGAAAAT+GGG - chr6.3:6543377-6543396 None:intergenic 15.0%
!! ATAAAAGATGAAGATTAAAA+TGG + chr6.3:6543584-6543603 MS.gene20447:intron 15.0%
!! CTAATGAATAAAAAATTTGT+AGG - chr6.3:6543485-6543504 None:intergenic 15.0%
!! TGATAAATAAGATAGAATAT+AGG - chr6.3:6543766-6543785 None:intergenic 15.0%
!! TTAAATAGTAAAAATGAGAT+AGG - chr6.3:6544197-6544216 None:intergenic 15.0%
!! TTTATTCCAAATGTAAAAAT+TGG - chr6.3:6544494-6544513 None:intergenic 15.0%
!!! AAAATGAAGTTAACATTTTT+TGG - chr6.3:6543828-6543847 None:intergenic 15.0%
!!! AAATTAAACATAGTCTTTTT+TGG - chr6.3:6543563-6543582 None:intergenic 15.0%
!!! TTCATACTATGTTTTTTTAA+AGG - chr6.3:6544445-6544464 None:intergenic 15.0%
!!! TTTAGAACAATATTAGAAAA+AGG - chr6.3:6543385-6543404 None:intergenic 15.0%
!!! TTTTAATTAATTTCTTTGCA+AGG + chr6.3:6543536-6543555 MS.gene20447:intron 15.0%
!! AATACTAAAACACTTACATT+TGG - chr6.3:6544165-6544184 None:intergenic 20.0%
!! CAATATTAGAAAAAGGAAAA+TGG - chr6.3:6543378-6543397 None:intergenic 20.0%
!! GATGCAAATAATCAATATAA+TGG + chr6.3:6545602-6545621 MS.gene20447:CDS 20.0%
!!! CTTTTATCTGAAAACTTTTT+AGG - chr6.3:6544135-6544154 None:intergenic 20.0%
!!! TATTATTTTCTGAACAGAAT+TGG - chr6.3:6544813-6544832 None:intergenic 20.0%
!!! TTTCTTCCAATTTTTACATT+TGG + chr6.3:6544485-6544504 MS.gene20447:intron 20.0%
! AAACTTACAAATGTAAGTGT+TGG + chr6.3:6544873-6544892 MS.gene20447:intron 25.0%
! AAAGGACCTACAAAAAATTA+TGG + chr6.3:6545216-6545235 MS.gene20447:intron 25.0%
! AATAGTAAAAATGAGATAGG+TGG - chr6.3:6544194-6544213 None:intergenic 25.0%
! ACTTGCTTAATAAGTTCAAT+AGG - chr6.3:6543259-6543278 None:intergenic 25.0%
! ATATTTACAAACATGATCCA+TGG + chr6.3:6543281-6543300 MS.gene20447:CDS 25.0%
! CATAAAGGACTAATCAAAAT+TGG - chr6.3:6544643-6544662 None:intergenic 25.0%
! CTTGTTGCTACAAAATTTAA+TGG - chr6.3:6545357-6545376 None:intergenic 25.0%
! GAATCCTGAAAAATTCATAA+AGG - chr6.3:6544658-6544677 None:intergenic 25.0%
! GTAAATGATAAATGATGGTT+TGG + chr6.3:6544359-6544378 MS.gene20447:intron 25.0%
! GTGTTATAAGAATTCTTACT+TGG - chr6.3:6543313-6543332 None:intergenic 25.0%
! TATAAGAATTCTTACTTGGA+AGG - chr6.3:6543309-6543328 None:intergenic 25.0%
! TATTGAACTTATTAAGCAAG+TGG + chr6.3:6543258-6543277 MS.gene20447:CDS 25.0%
! TATTTACAAACATGATCCAT+GGG + chr6.3:6543282-6543301 MS.gene20447:CDS 25.0%
! TTATCAATAATGTCTCCATT+AGG - chr6.3:6545488-6545507 None:intergenic 25.0%
!! AAAACCAATATAGTTTGTGT+TGG - chr6.3:6545579-6545598 None:intergenic 25.0%
!! TAGTCCTTTATGAATTTTTC+AGG + chr6.3:6544651-6544670 MS.gene20447:intron 25.0%
!! TGGATAAGAAAATGATGTTT+TGG + chr6.3:6543604-6543623 MS.gene20447:intron 25.0%
!! TTGTTGATAGGTTTGTAATT+TGG - chr6.3:6545428-6545447 None:intergenic 25.0%
!!! ATGAATTTTTCAGGATTCAT+GGG + chr6.3:6544660-6544679 MS.gene20447:intron 25.0%
!!! CAGAATCCATAATTTTTTGT+AGG - chr6.3:6545225-6545244 None:intergenic 25.0%
!!! TATGAATTTTTCAGGATTCA+TGG + chr6.3:6544659-6544678 MS.gene20447:intron 25.0%
!!! TTATCTGAAAACTTTTTAGG+AGG - chr6.3:6544132-6544151 None:intergenic 25.0%
AAACTTGGAGACAAATTGAA+TGG - chr6.3:6545731-6545750 None:intergenic 30.0%
AAATTTGTAGTGAGTAGTAC+CGG - chr6.3:6545307-6545326 None:intergenic 30.0%
AACTGAGATGGATATTAACA+AGG + chr6.3:6543141-6543160 MS.gene20447:CDS 30.0%
AAGTCACTTGTCTTCTATAA+GGG + chr6.3:6544030-6544049 MS.gene20447:CDS 30.0%
ATCAAATGCAGCTTAATCAA+TGG + chr6.3:6545678-6545697 MS.gene20447:CDS 30.0%
CCTAATAAGAGAGATAACAT+CGG + chr6.3:6545256-6545275 MS.gene20447:intron 30.0%
CTTAATCAATGGGAAAATCT+TGG + chr6.3:6545689-6545708 MS.gene20447:CDS 30.0%
CTTTCCAACACAAACTATAT+TGG + chr6.3:6545572-6545591 MS.gene20447:CDS 30.0%
GTGCTGTAAATGATAAATGA+TGG + chr6.3:6544354-6544373 MS.gene20447:intron 30.0%
TCAAATGCAGCTTAATCAAT+GGG + chr6.3:6545679-6545698 MS.gene20447:CDS 30.0%
TCTTGAATATTCACAACGTT+TGG - chr6.3:6545659-6545678 None:intergenic 30.0%
TTAATTGAGTGAAACTCATG+TGG + chr6.3:6545178-6545197 MS.gene20447:intron 30.0%
TTTCCATCTGATGAGTATAT+AGG - chr6.3:6543994-6544013 None:intergenic 30.0%
! AATGATAAATGATGGTTTGG+AGG + chr6.3:6544362-6544381 MS.gene20447:intron 30.0%
! AATGGTATTTCTATTGTCCA+AGG + chr6.3:6543890-6543909 MS.gene20447:CDS 30.0%
! ATGGTATTTCTATTGTCCAA+GGG + chr6.3:6543891-6543910 MS.gene20447:CDS 30.0%
! ATTGTGTTGATGTTGTTGAT+AGG - chr6.3:6545440-6545459 None:intergenic 30.0%
! TTTCTATATTTTCTGTCCCT+TGG - chr6.3:6543910-6543929 None:intergenic 30.0%
! TTTGCTGAATTTTTCTCTTG+AGG - chr6.3:6543228-6543247 None:intergenic 30.0%
!!! AGGTCCTTTTTCAAAATTGT+GGG - chr6.3:6545205-6545224 None:intergenic 30.0%
!!! TAGGTCCTTTTTCAAAATTG+TGG - chr6.3:6545206-6545225 None:intergenic 30.0%
AAAAGACATCTCAACTAGGT+TGG - chr6.3:6544390-6544409 None:intergenic 35.0%
AAAGGAAACAATAGAGTGCA+TGG - chr6.3:6544427-6544446 None:intergenic 35.0%
AACAGGAATTTGTGAGGATT+TGG - chr6.3:6545465-6545484 None:intergenic 35.0%
AATTCATTAACCATGCTTCC+TGG - chr6.3:6544766-6544785 None:intergenic 35.0%
AGTGTTAGAGTTAGTATTGC+CGG + chr6.3:6545285-6545304 MS.gene20447:intron 35.0%
ATAATGTCTCCATTAGGAAC+AGG - chr6.3:6545482-6545501 None:intergenic 35.0%
ATCATCAATTGTGCACTTTG+TGG - chr6.3:6545543-6545562 None:intergenic 35.0%
ATTAGGAACAGGAATTTGTG+AGG - chr6.3:6545471-6545490 None:intergenic 35.0%
ATTGGATGATGCATGAGTTT+AGG + chr6.3:6544079-6544098 MS.gene20447:CDS 35.0%
CAAGTAGTGGTGAAAAAGAA+TGG + chr6.3:6543872-6543891 MS.gene20447:CDS 35.0%
CCGATGTTATCTCTCTTATT+AGG - chr6.3:6545259-6545278 None:intergenic 35.0%
CTTCAAGTGTGTAGAACATT+AGG - chr6.3:6545511-6545530 None:intergenic 35.0%
GAAGTCACTTGTCTTCTATA+AGG + chr6.3:6544029-6544048 MS.gene20447:CDS 35.0%
TCACAAATTCCTGTTCCTAA+TGG + chr6.3:6545470-6545489 MS.gene20447:CDS 35.0%
TCATCAGATGGAAAATGCAT+TGG + chr6.3:6544000-6544019 MS.gene20447:CDS 35.0%
! AAAATCTGAAGCTGAGAAGT+TGG - chr6.3:6545405-6545424 None:intergenic 35.0%
! GTGTTTGAATCTGAAATGCA+TGG - chr6.3:6544108-6544127 None:intergenic 35.0%
!! AGACAATGCTTTTTGTACCA+TGG - chr6.3:6544722-6544741 None:intergenic 35.0%
!! ATGCTTTTTGTACCATGGAA+AGG - chr6.3:6544717-6544736 None:intergenic 35.0%
!! TGCTTTTTGTACCATGGAAA+GGG - chr6.3:6544716-6544735 None:intergenic 35.0%
!! TGGTCCCACAATTTTGAAAA+AGG + chr6.3:6545198-6545217 MS.gene20447:intron 35.0%
ACGTTTGGTTGCATATCTTG+AGG - chr6.3:6545644-6545663 None:intergenic 40.0%
AGGCCTATATACTCATCAGA+TGG + chr6.3:6543988-6544007 MS.gene20447:CDS 40.0%
CCAAAGGGATGAAAACTGAT+TGG + chr6.3:6544061-6544080 MS.gene20447:CDS 40.0%
CCAGCTCTTGTAACTCTATT+AGG - chr6.3:6543943-6543962 None:intergenic 40.0%
CCTAATAGAGTTACAAGAGC+TGG + chr6.3:6543940-6543959 MS.gene20447:CDS 40.0%
GAAAACCAATTCCCTTTCCA+TGG + chr6.3:6544702-6544721 MS.gene20447:CDS 40.0%
GCAGAAAAGACATCTCAACT+AGG - chr6.3:6544394-6544413 None:intergenic 40.0%
TAGAGTGCATGGACATCAAA+CGG - chr6.3:6544416-6544435 None:intergenic 40.0%
TCATGCACAACAACAGAACA+TGG + chr6.3:6544835-6544854 MS.gene20447:CDS 40.0%
TTCTACACACTTGAAGCCAA+TGG + chr6.3:6545515-6545534 MS.gene20447:CDS 40.0%
TTGTACCATGGAAAGGGAAT+TGG - chr6.3:6544710-6544729 None:intergenic 40.0%
! CCAATCAGTTTTCATCCCTT+TGG - chr6.3:6544064-6544083 None:intergenic 40.0%
! GAGTTACAAGAGCTGGATTT+TGG + chr6.3:6543947-6543966 MS.gene20447:CDS 40.0%
! GTCCTCAAAGCATCAAAACT+TGG - chr6.3:6545746-6545765 None:intergenic 40.0%
! TACAAGAGCTGGATTTTGGA+AGG + chr6.3:6543951-6543970 MS.gene20447:CDS 40.0%
! TTTGAGGACTAGTGTCACAT+GGG + chr6.3:6545757-6545776 MS.gene20447:CDS 40.0%
!! AAAAAGCATTGTCTCACCCT+TGG + chr6.3:6544728-6544747 MS.gene20447:CDS 40.0%
!! AAGGTTGATGATTTGATGCC+TGG + chr6.3:6543160-6543179 MS.gene20447:CDS 40.0%
!! CTCCAAGTTTTGATGCTTTG+AGG + chr6.3:6545741-6545760 MS.gene20447:CDS 40.0%
AACCATGCTTCCTGGTAACT+GGG - chr6.3:6544758-6544777 None:intergenic 45.0%
ACAGAACATGGATCATCAGC+AGG + chr6.3:6544847-6544866 MS.gene20447:CDS 45.0%
ACCAACAAGCTCTTCATCTG+TGG - chr6.3:6543200-6543219 None:intergenic 45.0%
AGGATTCATGGGCAATCTGT+AGG + chr6.3:6544671-6544690 MS.gene20447:intron 45.0%
ATAAGGGTAGAGCTGCCAAA+GGG + chr6.3:6544046-6544065 MS.gene20447:CDS 45.0%
CAAGAAGAGCTAGCAAGTAG+TGG + chr6.3:6543859-6543878 MS.gene20447:intron 45.0%
CCAACAAGCTCTTCATCTGT+GGG - chr6.3:6543199-6543218 None:intergenic 45.0%
TAACCATGCTTCCTGGTAAC+TGG - chr6.3:6544759-6544778 None:intergenic 45.0%
TATAAGGGTAGAGCTGCCAA+AGG + chr6.3:6544045-6544064 MS.gene20447:CDS 45.0%
TGAAGCTGAGAAGTTGGCAT+TGG - chr6.3:6545399-6545418 None:intergenic 45.0%
TGTGCACTTTGTGGAACCAT+TGG - chr6.3:6545534-6545553 None:intergenic 45.0%
TTCTTACTTGGAAGGTCCCA+TGG - chr6.3:6543301-6543320 None:intergenic 45.0%
! CTTTGAGGACTAGTGTCACA+TGG + chr6.3:6545756-6545775 MS.gene20447:CDS 45.0%
!!! AAAAAAGAATTTTTTTTTTT+TGG - chr6.3:6543658-6543677 None:intergenic 5.0%
!!! ATATATCTTTTATAAAAATA+TGG + chr6.3:6543510-6543529 MS.gene20447:intron 5.0%
!!! ATTTTTATAAAAGATATATA+TGG - chr6.3:6543509-6543528 None:intergenic 5.0%
!!! TTTTTATAAAAGATATATAT+GGG - chr6.3:6543508-6543527 None:intergenic 5.0%
CCCACAGATGAAGAGCTTGT+TGG + chr6.3:6543196-6543215 MS.gene20447:CDS 50.0%
CTGGTAACTGGGAGATCCAA+GGG - chr6.3:6544747-6544766 None:intergenic 50.0%
GGAAGGCAACTGGAACTGAT+AGG + chr6.3:6543968-6543987 MS.gene20447:CDS 50.0%
GTGGGATGAAAACGAAAGCC+AGG - chr6.3:6543181-6543200 None:intergenic 50.0%
!! GCTGGATTTTGGAAGGCAAC+TGG + chr6.3:6543958-6543977 MS.gene20447:CDS 50.0%
CCTGGTAACTGGGAGATCCA+AGG - chr6.3:6544748-6544767 None:intergenic 55.0%
CCTTGGATCTCCCAGTTACC+AGG + chr6.3:6544745-6544764 MS.gene20447:CDS 55.0%
CTCCCAGTTACCAGGAAGCA+TGG + chr6.3:6544753-6544772 MS.gene20447:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 6543130 6545802 6543130 ID=MS.gene20447
chr6.3 mRNA 6543130 6545802 6543130 ID=MS.gene20447.t1;Parent=MS.gene20447
chr6.3 exon 6543130 6543313 6543130 ID=MS.gene20447.t1.exon1;Parent=MS.gene20447.t1
chr6.3 CDS 6543130 6543313 6543130 ID=cds.MS.gene20447.t1;Parent=MS.gene20447.t1
chr6.3 exon 6543863 6544167 6543863 ID=MS.gene20447.t1.exon2;Parent=MS.gene20447.t1
chr6.3 CDS 6543863 6544167 6543863 ID=cds.MS.gene20447.t1;Parent=MS.gene20447.t1
chr6.3 exon 6544673 6544884 6544673 ID=MS.gene20447.t1.exon3;Parent=MS.gene20447.t1
chr6.3 CDS 6544673 6544884 6544673 ID=cds.MS.gene20447.t1;Parent=MS.gene20447.t1
chr6.3 exon 6545370 6545802 6545370 ID=MS.gene20447.t1.exon4;Parent=MS.gene20447.t1
chr6.3 CDS 6545370 6545802 6545370 ID=cds.MS.gene20447.t1;Parent=MS.gene20447.t1
Gene Sequence

>MS.gene20447

ATGGAGGAAAGAACTGAGATGGATATTAACAAGGTTGATGATTTGATGCCTGGCTTTCGTTTTCATCCCACAGATGAAGAGCTTGTTGGTTTTTACCTCAAGAGAAAAATTCAGCAAAAATCTCTTCCTATTGAACTTATTAAGCAAGTGGATATTTACAAACATGATCCATGGGACCTTCCAAGTAAGAATTCTTATAACACAAACTTAATATTTTCTAGCTTTCTCTTGTTTTAACATAAAACCCATTTTCCTTTTTCTAATATTGTTCTAAAAAGTGAACACAAAATTTTAAATATTAAGATTCTGTTTAATTGAAGAAAATAATCAGTTTACATTTTAAATTTTGATCCCTACAAATTTTTTATTCATTAGCCCATATATATCTTTTATAAAAATATGGTATTTTTAATTAATTTCTTTGCAAGGACCAAAAAAGACTATGTTTAATTTTATAAAAGATGAAGATTAAAATGGATAAGAAAATGATGTTTTGGTATTTTTGAATTTCATTTTTTTTTGTAACCAAAAAAAAAAAATTCTTTTTTTTTAATCATAGTATTTTTGAATTTCATAAAAATGTTGAATCAGTTTTTAAAAATTGTACAAGAAAATGACAAGAGAATTATTGAACCTATATTCTATCTTATTTATCAATTAAATTGAAAACATAAAATATGAAACTATTTTATTGACCAAAAAATGTTAACTTCATTTTATTTTTGTAAACAAGAAGAGCTAGCAAGTAGTGGTGAAAAAGAATGGTATTTCTATTGTCCAAGGGACAGAAAATATAGAAACAGTTCAAGACCTAATAGAGTTACAAGAGCTGGATTTTGGAAGGCAACTGGAACTGATAGGCCTATATACTCATCAGATGGAAAATGCATTGGTTTGAAGAAGTCACTTGTCTTCTATAAGGGTAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGTTACCATGCATTTCAGATTCAAACACTCCTCCTAAAAAGTTTTCAGATAAAAGTTTCTCTCCAAATGTAAGTGTTTTAGTATTTTCATACCACCTATCTCATTTTTACTATTTAATATATTTTTACTAGATAATTTTATTGTAGAATATTATAAGTCAAAATTAGTTTTAAGTTACACCATTTAATAAAATTTCTAGATACTTAAATACATGCATTAATCTAAAATGATTCAACATAGTATAAAATTTTAGAGTGCTGTAAATGATAAATGATGGTTTGGAGGTACCAACCTAGTTGAGATGTCTTTTCTGCCGTTTGATGTCCATGCACTCTATTGTTTCCTTTAAAAAAACATAGTATGAAAATAAGAACAATAATTTTTTTTTCTTCCAATTTTTACATTTGGAATAAACAATGAGTAATCACTCATCTATTAAATCAAATGAAAAAAATATTACATTTTACTAAATCAAATGAAAAAAATATTACATTTTAGCTAATGTTATTAAATGAACATTGTTAAGTTTTGTTCTACATTCCAATTTTGATTAGTCCTTTATGAATTTTTCAGGATTCATGGGCAATCTGTAGGATCTTCAAGAAAACCAATTCCCTTTCCATGGTACAAAAAGCATTGTCTCACCCTTGGATCTCCCAGTTACCAGGAAGCATGGTTAATGAATTACTCACACAAACTACAAACATCAACCAATTCTGTTCAGAAAATAATATCTCATGCACAACAACAGAACATGGATCATCAGCAGGAACAAACTTACAAATGTAAGTGTTGGAAGTTTTCAATAATATTTTATCAGTACTACTATAATATCTAATTTACTTATTTATCATATAAAGAATTAGATGCAAATTAAGTCAAATGAGAAATGAATTGTTGAATAAATTATTTAGTTGCTTGTATGAGAAGAAATATTTTTATTGACACTTAAATAAGAAAATCATCAATATTTTCATAATATGAAAAATCGTAGATAACAATTTTGATGTATATTTAAAAATAAAGTATTAAGTGATTGCAAACTTACTCTAAAACTCTCTTTTTAACATTAGAAGTTTTAATTGAGTGAAACTCATGTGGTCCCACAATTTTGAAAAAGGACCTACAAAAAATTATGGATTCTGCATGAATTTGACCTAATAAGAGAGATAACATCGGAAAAATAGTGTTAGAGTTAGTATTGCCGGTACTACTCACTACAAATTTATATATCAATGTGCCTAATAATTTTATCCATTAAATTTTGTAGCAACAAGCATGAGCTACAACAAGTCTCCAATGCCAACTTCTCAGCTTCAGATTTTCCAAATTACAAACCTATCAACAACATCAACACAATTTCCAAATCCTCACAAATTCCTGTTCCTAATGGAGACATTATTGATAACCTAATGTTCTACACACTTGAAGCCAATGGTTCCACAAAGTGCACAATTGATGATAGTTCAATTCTTTCCAACACAAACTATATTGGTTTTGAAGATGCAAATAATCAATATAATGGCTTTTCAATTAGTTTACCTCAAGATATGCAACCAAACGTTGTGAATATTCAAGATCAAATGCAGCTTAATCAATGGGAAAATCTTGGAAGAACAATTGAATTTCCATTCAATTTGTCTCCAAGTTTTGATGCTTTGAGGACTAGTGTCACATGGGACTCACCACCTTGCACTAGTTAA
Protein sequence

>MS.gene20447.t1

MEERTEMDINKVDDLMPGFRFHPTDEELVGFYLKRKIQQKSLPIELIKQVDIYKHDPWDLPKELASSGEKEWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRLPCISDSNTPPKKFSDKSFSPNDSWAICRIFKKTNSLSMVQKALSHPWISQLPGSMVNELLTQTTNINQFCSENNISCTTTEHGSSAGTNLQINKHELQQVSNANFSASDFPNYKPINNINTISKSSQIPVPNGDIIDNLMFYTLEANGSTKCTIDDSSILSNTNYIGFEDANNQYNGFSISLPQDMQPNVVNIQDQMQLNQWENLGRTIEFPFNLSPSFDALRTSVTWDSPPCTS