AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20471

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20471.t1 MTR_6g011450 97.738 840 19 0 1 840 1 840 0.0 1693
MS.gene20471.t1 MTR_6g011450 97.436 702 18 0 139 840 1 702 0.0 1413
MS.gene20471.t1 MTR_4g073340 74.640 556 102 5 285 840 5 521 0.0 750
MS.gene20471.t1 MTR_6g011470 71.020 245 36 2 569 813 1 210 4.01e-115 348
MS.gene20471.t1 MTR_7g103840 37.978 366 172 11 37 388 78 402 4.99e-60 221
MS.gene20471.t1 MTR_7g103840 36.782 174 106 3 645 816 847 1018 1.28e-32 136
MS.gene20471.t1 MTR_7g103840 37.978 366 172 11 37 388 76 400 5.77e-60 221
MS.gene20471.t1 MTR_7g103840 36.782 174 106 3 645 816 845 1016 1.13e-32 137
MS.gene20471.t1 MTR_1g061130 37.534 365 186 11 40 394 80 412 8.50e-57 211
MS.gene20471.t1 MTR_1g061130 35.632 174 106 4 645 814 838 1009 9.40e-31 130
MS.gene20471.t1 MTR_1g061130 37.534 365 186 11 40 394 80 412 1.50e-56 211
MS.gene20471.t1 MTR_1g061130 35.632 174 106 4 645 814 838 1009 1.11e-30 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20471.t1 AT4G04885 45.915 869 359 22 1 840 22 808 0.0 637
MS.gene20471.t1 AT2G36480 35.754 358 180 10 41 379 88 414 5.78e-50 191
MS.gene20471.t1 AT2G36480 33.140 172 106 3 645 816 785 947 2.06e-25 113
MS.gene20471.t1 AT2G36480 35.754 358 180 10 41 379 88 414 5.78e-50 191
MS.gene20471.t1 AT2G36480 33.140 172 106 3 645 816 785 947 2.06e-25 113
MS.gene20471.t1 AT1G66500 34.959 369 159 16 495 821 67 396 8.18e-49 179
MS.gene20471.t1 AT5G43620 45.355 183 79 4 648 821 220 390 7.02e-46 170

Find 222 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATTATGGCCTAGTTAA+AGG 0.199059 6.3:+6078825 MS.gene20471:CDS
CACATAATGCACATGTATTT+TGG 0.204278 6.3:-6080356 None:intergenic
CATCGTCACAATTTACTTAT+AGG 0.228217 6.3:+6079603 MS.gene20471:CDS
TCTATTTGTCTTACGTATCT+TGG 0.237116 6.3:-6078132 None:intergenic
AAGAGTTGTTTCCGATTCTT+TGG 0.278868 6.3:-6079706 None:intergenic
TAATTTGATTAATTCACTTA+TGG 0.281069 6.3:+6079853 MS.gene20471:CDS
CCCCATCATGCTGTTGATTA+TGG 0.284990 6.3:+6078813 MS.gene20471:CDS
AGCAGAAGCCCTCTCGTAAA+TGG 0.298225 6.3:+6080202 MS.gene20471:CDS
TCAGTGTCAAGGGTGTTTCC+TGG 0.301890 6.3:+6079227 MS.gene20471:CDS
GCTTACTGCCAGAAGTTTCT+TGG 0.305569 6.3:-6079004 None:intergenic
CCTGATGGTTGATTATTAAC+TGG 0.309564 6.3:-6078051 None:intergenic
TAGGCATATGCCCTCATATA+TGG 0.310130 6.3:+6078740 MS.gene20471:CDS
ATGCCTGTTGTTATTCCATT+AGG 0.320007 6.3:-6080453 None:intergenic
GATTGGGATGAGGTGGCATC+TGG 0.331410 6.3:-6079787 None:intergenic
GATTCGAATGGATTCCTAAC+AGG 0.333615 6.3:-6079371 None:intergenic
CTGCATTTAGCATGAATAAT+GGG 0.336904 6.3:-6080495 None:intergenic
AGATGAAGAGTTGGCTGTTC+CGG 0.339955 6.3:+6080323 MS.gene20471:CDS
TGAACAATTTCTTCCGTTGA+AGG 0.350956 6.3:-6075541 None:intergenic
TCTAGGAAGATTACCGTATA+AGG 0.356434 6.3:-6080082 None:intergenic
TCTGCTATGCGACATCTCTT+TGG 0.357635 6.3:+6077961 MS.gene20471:CDS
TCTTTGACTGCCTTCGTCAT+AGG 0.357947 6.3:-6081195 None:intergenic
TTATTCCATTAGGCGCATTA+AGG 0.358655 6.3:-6080443 None:intergenic
GGTTTCCTGCAACCAACTAT+TGG 0.360158 6.3:+6079158 MS.gene20471:CDS
TATGGCCTAGTTAAAGGATT+AGG 0.367937 6.3:+6078831 MS.gene20471:CDS
TCTGCATTTAGCATGAATAA+TGG 0.369592 6.3:-6080496 None:intergenic
TGCCTATCAAGTCCAATTCT+TGG 0.377024 6.3:-6078723 None:intergenic
CTATTTGTCTTACGTATCTT+GGG 0.379077 6.3:-6078131 None:intergenic
GTTTCATCCTCACAGGTTGC+AGG 0.381654 6.3:+6078594 MS.gene20471:intron
TACGAGAGGGCTTCTGCTTA+CGG 0.385096 6.3:-6080197 None:intergenic
TAGGCATCAATTAGTGCTCT+TGG 0.388516 6.3:-6078966 None:intergenic
ATGACTCACAATGGTACTAT+TGG 0.398029 6.3:-6079402 None:intergenic
AGAAACCAATAGTTGGTTGC+AGG 0.398885 6.3:-6079163 None:intergenic
TCTTCGTCACCACCAAGAAT+TGG 0.400029 6.3:+6078711 MS.gene20471:CDS
GGCTGTTGGCTTGGTACAAA+TGG 0.400747 6.3:-6079815 None:intergenic
GGCATAACAGGTCGTACATT+TGG 0.402384 6.3:-6079668 None:intergenic
CAGCTACCTAATCAGCTTCC+TGG 0.402588 6.3:+6079509 MS.gene20471:CDS
TCTGCAATCAGTGCCTTATA+CGG 0.402883 6.3:+6080069 MS.gene20471:CDS
ACGTGGAGCATGCACATTTA+CGG 0.404948 6.3:-6079312 None:intergenic
GCTGATTAGGTAGCTGATAC+AGG 0.407419 6.3:-6079502 None:intergenic
GTGACTGCTGTGCTCGTCTT+GGG 0.407489 6.3:-6080136 None:intergenic
CGATTCTTTGGCCTGGCAAA+GGG 0.408289 6.3:-6079694 None:intergenic
CGCATAGCAGAATGTAAACT+TGG 0.411538 6.3:-6077949 None:intergenic
TAAATATTCATCCATATATG+AGG 0.415257 6.3:-6078751 None:intergenic
GACAAAAGCCAAGAAACTTC+TGG 0.416293 6.3:+6078996 MS.gene20471:CDS
GAAGATCTTCCAACCCTACT+TGG 0.416371 6.3:-6078693 None:intergenic
GGCAAAGGGAGTGGCATAAC+AGG 0.420754 6.3:-6079680 None:intergenic
GACGGTGTTTGTACACTGTT+TGG 0.421276 6.3:-6079551 None:intergenic
AAAGAAAGAAGATGAAGAGT+TGG 0.422834 6.3:+6080314 MS.gene20471:CDS
AGAAGTATCGAACATATTCC+TGG 0.424947 6.3:-6077801 None:intergenic
TGTGACTGCTGTGCTCGTCT+TGG 0.427292 6.3:-6080137 None:intergenic
GGATTCTTCGATGGAAATAT+AGG 0.431337 6.3:-6079350 None:intergenic
CTTAGTGGTGCAGAGGCATT+GGG 0.433928 6.3:+6080246 MS.gene20471:CDS
GACGTGGTTGTCCGTTACTA+AGG 0.434804 6.3:-6078938 None:intergenic
ATCAGACCAGGAAGCTGATT+AGG 0.435569 6.3:-6079515 None:intergenic
GTATACCTTAATGCGCCTAA+TGG 0.441302 6.3:+6080438 MS.gene20471:CDS
GCATTGGCTGCAACAGTAGC+AGG 0.444681 6.3:-6079197 None:intergenic
CCGATTCTTTGGCCTGGCAA+AGG 0.444884 6.3:-6079695 None:intergenic
CATCAGGCGTTAATTCCCTT+AGG 0.446704 6.3:+6078067 MS.gene20471:CDS
AATCCTCGTTGGTCGATTCA+AGG 0.447934 6.3:+6075468 MS.gene20471:CDS
TGACGAACCTTCAGAGTGTC+TGG 0.448661 6.3:-6080042 None:intergenic
GCCATAATCAACAGCATGAT+GGG 0.449248 6.3:-6078814 None:intergenic
GCTTAGTGGTGCAGAGGCAT+TGG 0.449928 6.3:+6080245 MS.gene20471:CDS
ACTGTTGGAAATGCAAATTT+CGG 0.451845 6.3:+6078639 MS.gene20471:CDS
AATCGACCAACGAGGATTGA+TGG 0.453327 6.3:-6075463 None:intergenic
GCTCGTCTTGGGATTTGAAT+CGG 0.457134 6.3:-6080125 None:intergenic
GCCTTTGTTAGTTGAGCGGC+TGG 0.457470 6.3:+6079025 MS.gene20471:CDS
AGCCAATGAGATTACACCTT+GGG 0.459714 6.3:-6079876 None:intergenic
TGGAAATATAGGAGTTATGC+TGG 0.461860 6.3:-6079339 None:intergenic
TAACAGGTCGTACATTTGGC+AGG 0.462054 6.3:-6079664 None:intergenic
TCTTCCCTCCTTCTGTCTTA+CGG 0.462978 6.3:+6077998 MS.gene20471:CDS
TTGGGAGCCGAATCAGCTCC+AGG 0.463136 6.3:+6080264 MS.gene20471:CDS
TTCCATCGAAGAATCCTGTT+AGG 0.463431 6.3:+6079357 MS.gene20471:CDS
CCAACAGTTGGCTGTTGGCT+TGG 0.468279 6.3:-6079824 None:intergenic
GTTATGCCACTCCCTTTGCC+AGG 0.474289 6.3:+6079683 MS.gene20471:CDS
CTTTGGCCTGGCAAAGGGAG+TGG 0.476898 6.3:-6079689 None:intergenic
CTCTACCTAATCCTTTAACT+AGG 0.477129 6.3:-6078836 None:intergenic
TGGTACAAATGGACTAGGAT+TGG 0.478050 6.3:-6079804 None:intergenic
GGTGAAAGGTTAGACTCAAC+AGG 0.478337 6.3:+6078615 MS.gene20471:CDS
TTGGCATTTATTGATTCGAA+TGG 0.478491 6.3:-6079383 None:intergenic
TTGAACAATCTCATTGCTCA+TGG 0.479291 6.3:-6075431 None:intergenic
ACTTATAGGCCATCTTTGCC+AGG 0.479835 6.3:+6079617 MS.gene20471:CDS
CCAGTTAATAATCAACCATC+AGG 0.481608 6.3:+6078051 MS.gene20471:CDS
GGTTGTTCATGCACAGGAAA+AGG 0.482614 6.3:-6079440 None:intergenic
TCTGATGAGAAACCAATAGT+TGG 0.483041 6.3:-6079170 None:intergenic
CTGAAGAAGAGGAGTTCGAT+TGG 0.483295 6.3:+6079093 MS.gene20471:CDS
TAAGTAAATTGTGACGATGC+TGG 0.483338 6.3:-6079599 None:intergenic
ATCAGGCGTTAATTCCCTTA+GGG 0.483589 6.3:+6078068 MS.gene20471:CDS
GGCCCAAGGTGTAATCTCAT+TGG 0.483897 6.3:+6079874 MS.gene20471:CDS
GCTACCTTCACTCTATCTCT+TGG 0.484585 6.3:+6077756 MS.gene20471:CDS
GAGAAATTCGCAACCTTCAA+CGG 0.486784 6.3:+6075528 MS.gene20471:CDS
GAATCTCCTCGACCTACTCA+TGG 0.489388 6.3:+6078096 MS.gene20471:CDS
GGCATAGACAGGTCGCAGTT+AGG 0.489584 6.3:+6080471 MS.gene20471:CDS
GGATAGAAATGGTATGGATA+AGG 0.494929 6.3:+6079046 MS.gene20471:CDS
CAACATCGTAATCATGCTAA+AGG 0.497052 6.3:+6075640 MS.gene20471:CDS
GCGCCTAATGGAATAACAAC+AGG 0.497466 6.3:+6080450 MS.gene20471:CDS
TATTGTGAAGAATGTTGGCC+AGG 0.499257 6.3:+6077783 MS.gene20471:CDS
TTAGACTCAACAGGAACTGT+TGG 0.499630 6.3:+6078624 MS.gene20471:CDS
ATAGTAAGATCAGTGATGAT+AGG 0.500445 6.3:-6075607 None:intergenic
GGTACAAATGGACTAGGATT+GGG 0.500633 6.3:-6079803 None:intergenic
TGTAGGCCAGGTGGAGGTAA+AGG 0.501114 6.3:-6079755 None:intergenic
GGCCATAATCAACAGCATGA+TGG 0.502882 6.3:-6078815 None:intergenic
ACGGAGGAGTGGATGTATAG+AGG 0.502902 6.3:+6080411 MS.gene20471:CDS
CCACAAGTTGTGCACTGTCT+AGG 0.505428 6.3:-6080099 None:intergenic
TCACTGTAAAACTCCTCAAA+AGG 0.506831 6.3:-6080384 None:intergenic
GGATGAGGTGGCATCTGGGA+TGG 0.507178 6.3:-6079782 None:intergenic
TGACCATGTCCTGGCAAAGA+TGG 0.508872 6.3:-6079626 None:intergenic
TGCGACATCTCTTTGGTACC+TGG 0.510544 6.3:+6077968 MS.gene20471:CDS
CACCAAGAATTGGACTTGAT+AGG 0.511974 6.3:+6078721 MS.gene20471:CDS
TAATCAATTTGTCCCAAGTA+GGG 0.514638 6.3:+6078680 MS.gene20471:CDS
CCTTTGCCAGGCCAAAGAAT+CGG 0.515014 6.3:+6079695 MS.gene20471:CDS
TGGGATGGAGCGTGTAGGCC+AGG 0.515113 6.3:-6079767 None:intergenic
CAATTTGTCCCAAGTAGGGT+TGG 0.520932 6.3:+6078684 MS.gene20471:CDS
GGAGTTATGCTGGGAGGACG+TGG 0.523802 6.3:-6079329 None:intergenic
TTGTTTCCGATTCTTTGGCC+TGG 0.524049 6.3:-6079701 None:intergenic
GTGTTTGTACACTGTTTGGC+GGG 0.527616 6.3:-6079547 None:intergenic
TGAAGAAGAGGAGTTCGATT+GGG 0.528053 6.3:+6079094 MS.gene20471:CDS
TGCCTCATTTCAAAAGCTGC+AGG 0.528790 6.3:-6079287 None:intergenic
AGAGCACTAATTGATGCCTA+TGG 0.528940 6.3:+6078969 MS.gene20471:CDS
CAAAATACATGTGCATTATG+TGG 0.529245 6.3:+6080357 MS.gene20471:CDS
AAAGCTGCAGGCAAAACTGT+TGG 0.529877 6.3:-6079275 None:intergenic
AGGCCATCTTTGCCAGGACA+TGG 0.529945 6.3:+6079623 MS.gene20471:CDS
TTCCGACTATCACCAGAAAA+CGG 0.530968 6.3:-6078888 None:intergenic
GTTGAGCGGCTGGATAGAAA+TGG 0.532637 6.3:+6079035 MS.gene20471:CDS
TAGATTTAGTTACCTGTGAA+GGG 0.535484 6.3:-6079907 None:intergenic
AAGGTCGCAAAGCTCCTCCC+TGG 0.535607 6.3:-6079736 None:intergenic
ATTAATTCACTTATGGCCCA+AGG 0.541882 6.3:+6079860 MS.gene20471:CDS
CCATCACAAAATCTTCAGAC+GGG 0.543390 6.3:-6080530 None:intergenic
GAGGAGATTCAGAAGCCCTA+AGG 0.544074 6.3:-6078083 None:intergenic
AGCACAGCAGTCACATGGAT+TGG 0.544101 6.3:+6080145 MS.gene20471:CDS
AATATCCAACAGTTGGCTGT+TGG 0.544187 6.3:-6079829 None:intergenic
GTAGATTTAGTTACCTGTGA+AGG 0.544427 6.3:-6079908 None:intergenic
AAATTAGAATATCCAACAGT+TGG 0.545058 6.3:-6079836 None:intergenic
GGTGTTTGTACACTGTTTGG+CGG 0.545314 6.3:-6079548 None:intergenic
TTAATCAATTTGTCCCAAGT+AGG 0.545867 6.3:+6078679 MS.gene20471:CDS
CTCATAGCATGACCATGTCC+TGG 0.547495 6.3:-6079635 None:intergenic
GACAGTATTGTGAAGAATGT+TGG 0.548430 6.3:+6077778 MS.gene20471:CDS
TGACACTGAAGAAGTTGCAT+TGG 0.548483 6.3:-6079213 None:intergenic
TGGCTTGGTACAAATGGACT+AGG 0.548518 6.3:-6079809 None:intergenic
GAATAACAACAGGCATAGAC+AGG 0.548628 6.3:+6080460 MS.gene20471:CDS
GAGAAGAAGAGTTGAGTGAG+TGG 0.550334 6.3:+6078856 MS.gene20471:CDS
GGCTAATCAAGCCCCTTCAC+AGG 0.551075 6.3:+6079895 MS.gene20471:CDS
GCGGCTGGATAGAAATGGTA+TGG 0.551376 6.3:+6079040 MS.gene20471:CDS
GTAGACCATGGTAGAAGTAA+TGG 0.552062 6.3:+6079137 MS.gene20471:CDS
CCTCACAGGTTGCAGGTGAA+AGG 0.553428 6.3:+6078601 MS.gene20471:intron
ATGCAACTTCTTCAGTGTCA+AGG 0.556856 6.3:+6079216 MS.gene20471:CDS
TGCTGCGGTTGTTCATGCAC+AGG 0.560692 6.3:-6079446 None:intergenic
TTGCGACCTTTACCTCCACC+TGG 0.561617 6.3:+6079749 MS.gene20471:CDS
ATCTTCCGTAAGACAGAAGG+AGG 0.562765 6.3:-6078003 None:intergenic
TATTTAGCTGACAATTCCAC+TGG 0.562774 6.3:+6078768 MS.gene20471:CDS
TTCCTAACAGGATTCTTCGA+TGG 0.563320 6.3:-6079359 None:intergenic
CTAAGGGAATTAACGCCTGA+TGG 0.563337 6.3:-6078066 None:intergenic
ATTGGGATGAGGTGGCATCT+GGG 0.564645 6.3:-6079786 None:intergenic
TGCAACTTCTTCAGTGTCAA+GGG 0.565136 6.3:+6079217 MS.gene20471:CDS
CCAAGCCAACAGCCAACTGT+TGG 0.566173 6.3:+6079824 MS.gene20471:CDS
TATTTGCAACCGTATTGTTG+AGG 0.569428 6.3:+6075675 MS.gene20471:CDS
GGAGCGTGTAGGCCAGGTGG+AGG 0.571119 6.3:-6079761 None:intergenic
CTATCAAGTCCAATTCTTGG+TGG 0.571361 6.3:-6078720 None:intergenic
TCCATCACAAAATCTTCAGA+CGG 0.571706 6.3:-6080531 None:intergenic
ATGCAGGGCACCTATGACGA+AGG 0.573164 6.3:+6081185 MS.gene20471:intron
TCAATATTTGAATTGAGACC+AGG 0.575901 6.3:-6079245 None:intergenic
AAGATCTTCCAACCCTACTT+GGG 0.576601 6.3:-6078692 None:intergenic
GTAAGCCTTTGTTAGTTGAG+CGG 0.577243 6.3:+6079021 MS.gene20471:CDS
AACAGGTCGTACATTTGGCA+GGG 0.583155 6.3:-6079663 None:intergenic
CCTAGACAGTGCACAACTTG+TGG 0.586792 6.3:+6080099 MS.gene20471:CDS
ATGGCAGAATACTGAAGAAG+AGG 0.586832 6.3:+6079082 MS.gene20471:CDS
AATAGTACCATTGTGAGTCA+TGG 0.588735 6.3:+6079404 MS.gene20471:CDS
ACAGGTCGTACATTTGGCAG+GGG 0.590048 6.3:-6079662 None:intergenic
GGACTAGGATTGGGATGAGG+TGG 0.594447 6.3:-6079794 None:intergenic
TAGCTGACAATTCCACTGGT+AGG 0.595215 6.3:+6078772 MS.gene20471:CDS
AACGTCGTGAAGAAGATCCT+AGG 0.595573 6.3:+6075503 MS.gene20471:CDS
AGATTTAGTTACCTGTGAAG+GGG 0.598702 6.3:-6079906 None:intergenic
AGACGAGCACAGCAGTCACA+TGG 0.599845 6.3:+6080140 MS.gene20471:CDS
AGTGAGACGATGTGGCTTAG+TGG 0.601641 6.3:+6080231 MS.gene20471:CDS
AATCTCCTCGACCTACTCAT+GGG 0.602277 6.3:+6078097 MS.gene20471:CDS
AGGAGATTCAGAAGCCCTAA+GGG 0.603089 6.3:-6078082 None:intergenic
GATGGAGCGTGTAGGCCAGG+TGG 0.605223 6.3:-6079764 None:intergenic
TCAATCTTCCGTAAGACAGA+AGG 0.606789 6.3:-6078006 None:intergenic
CTCACAAACCATTTACGAGA+GGG 0.607148 6.3:-6080210 None:intergenic
GGAAACCATTACTTCTACCA+TGG 0.608961 6.3:-6079142 None:intergenic
TCCAGCCGCTCAACTAACAA+AGG 0.610598 6.3:-6079026 None:intergenic
CTACCATGGTCTACTACTGT+CGG 0.610600 6.3:-6079128 None:intergenic
GGGTTAGATGAAATCAGACC+AGG 0.611439 6.3:-6079527 None:intergenic
GGAAATATAGGAGTTATGCT+GGG 0.611878 6.3:-6079338 None:intergenic
GTTTGATCCAGACACTCTGA+AGG 0.612852 6.3:+6080035 MS.gene20471:CDS
TTGTTCTCAACACCGTGCTG+CGG 0.615224 6.3:-6079461 None:intergenic
GCATCTGGGATGGAGCGTGT+AGG 0.618464 6.3:-6079772 None:intergenic
CCTCCACCATCAATCCTCGT+TGG 0.618578 6.3:+6075457 MS.gene20471:CDS
AAATATTCATCCATATATGA+GGG 0.620513 6.3:-6078750 None:intergenic
TGTATCCCATGAGTAGGTCG+AGG 0.621605 6.3:-6078102 None:intergenic
CGACCAACGAGGATTGATGG+TGG 0.625674 6.3:-6075460 None:intergenic
TTAACATGTATCCCATGAGT+AGG 0.630712 6.3:-6078108 None:intergenic
CCAACGAGGATTGATGGTGG+AGG 0.631737 6.3:-6075457 None:intergenic
TGCATTTAGCATGAATAATG+GGG 0.635399 6.3:-6080494 None:intergenic
ACAGTGATGAAACGGAGGAG+TGG 0.635697 6.3:+6080400 MS.gene20471:CDS
CGTCTTGGGATTTGAATCGG+AGG 0.638892 6.3:-6080122 None:intergenic
AATGGACTAGGATTGGGATG+AGG 0.642770 6.3:-6079797 None:intergenic
GTTGGCTGTTCCGGCCGACG+AGG 0.646045 6.3:+6080332 MS.gene20471:CDS
TCTCTCAACTGTCCTACCAG+TGG 0.650741 6.3:-6078784 None:intergenic
TGTCTTACGGAAGATTGACG+TGG 0.654293 6.3:+6078011 MS.gene20471:CDS
ATAAGGTTATGACAACATCA+TGG 0.656509 6.3:+6079063 MS.gene20471:CDS
GGTTGCGAATTTCTCAACCT+AGG 0.656958 6.3:-6075520 None:intergenic
CTGTCCAAGAGATAGAGTGA+AGG 0.659112 6.3:-6077760 None:intergenic
ATGACATATAGCCTTAGTAA+CGG 0.660592 6.3:+6078927 MS.gene20471:CDS
TAGCCAATGAGATTACACCT+TGG 0.661273 6.3:-6079877 None:intergenic
CTGCAGGCAAAACTGTTGGA+CGG 0.661666 6.3:-6079271 None:intergenic
GATGTGGCTTAGTGGTGCAG+AGG 0.663497 6.3:+6080239 MS.gene20471:CDS
GACGATGCTGGATCCTGAGG+TGG 0.665612 6.3:-6079587 None:intergenic
TGTGACGATGCTGGATCCTG+AGG 0.668027 6.3:-6079590 None:intergenic
TAACCTACTTCGGGTAGACG+CGG 0.669168 6.3:-6077826 None:intergenic
GATTAGACCATGACTCACAA+TGG 0.673650 6.3:-6079411 None:intergenic
CATCACAAAATCTTCAGACG+GGG 0.674739 6.3:-6080529 None:intergenic
CCATAATCAACAGCATGATG+GGG 0.676024 6.3:-6078813 None:intergenic
CAGGTCGTACATTTGGCAGG+GGG 0.677425 6.3:-6079661 None:intergenic
GTGCATGAACAACCGCAGCA+CGG 0.680455 6.3:+6079449 MS.gene20471:CDS
ACTCACAAACCATTTACGAG+AGG 0.681960 6.3:-6080211 None:intergenic
AGTCCGACAGTAGTAGACCA+TGG 0.699248 6.3:+6079125 MS.gene20471:CDS
GCAGTCAAAGAAAACGAATG+CGG 0.700511 6.3:+6081207 MS.gene20471:CDS
GGTTTGTGAGTGAGACGATG+TGG 0.720083 6.3:+6080223 MS.gene20471:CDS
TCTTCCGTAAGACAGAAGGA+GGG 0.728444 6.3:-6078002 None:intergenic
AATATAGGAGTTATGCTGGG+AGG 0.735215 6.3:-6079335 None:intergenic
AAGCCTTGAATCGACCAACG+AGG 0.765396 6.3:-6075471 None:intergenic
TTTGCCAACCGAGACCACTG+AGG 0.774441 6.3:+6080290 MS.gene20471:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATATAATTACAAAGT+TGG - chr6.3:6079992-6080011 None:intergenic 10.0%
!! TGATTAATAATTGTTTATTT+GGG + chr6.3:6075926-6075945 MS.gene20471:intron 10.0%
!! TGTAATTATATTATATTTGT+AGG + chr6.3:6079996-6080015 MS.gene20471:intron 10.0%
!! TTGATTAATAATTGTTTATT+TGG + chr6.3:6075925-6075944 MS.gene20471:intron 10.0%
!! ACAAAATAACATATTAACAT+AGG - chr6.3:6076868-6076887 None:intergenic 15.0%
!! AGAAAAAATAGAAAAGAAAA+AGG - chr6.3:6077619-6077638 None:intergenic 15.0%
!! AGATATTTATAGAAAATGAT+AGG - chr6.3:6077131-6077150 None:intergenic 15.0%
!! ATAACAGAATTAAATCATTT+AGG - chr6.3:6077870-6077889 None:intergenic 15.0%
!! ATAATTTCGTGTAATAATAA+TGG + chr6.3:6076355-6076374 MS.gene20471:intron 15.0%
!! TAATTTCGTGTAATAATAAT+GGG + chr6.3:6076356-6076375 MS.gene20471:intron 15.0%
!! TAATTTGATTAATTCACTTA+TGG + chr6.3:6079853-6079872 MS.gene20471:CDS 15.0%
!! TCTTCTTATTAAGTTTATAT+GGG + chr6.3:6077302-6077321 MS.gene20471:intron 15.0%
!! TTAACAAATGGTAAAATTTA+GGG + chr6.3:6076217-6076236 MS.gene20471:intron 15.0%
!!! AAATATTTTAATTTCTGTTG+AGG + chr6.3:6078415-6078434 MS.gene20471:intron 15.0%
!!! TCTAAAATCAAAATTGATAT+GGG - chr6.3:6077421-6077440 None:intergenic 15.0%
!! AAATAAGTTTGATTCTTTGT+TGG + chr6.3:6077348-6077367 MS.gene20471:intron 20.0%
!! AAATATTCATCCATATATGA+GGG - chr6.3:6078753-6078772 None:intergenic 20.0%
!! AATTTCGTGTAATAATAATG+GGG + chr6.3:6076357-6076376 MS.gene20471:intron 20.0%
!! ACTGAAAATACTATAATATC+TGG + chr6.3:6076475-6076494 MS.gene20471:intron 20.0%
!! ATAATTGTTTATTTGGGAAT+TGG + chr6.3:6075932-6075951 MS.gene20471:intron 20.0%
!! CAAAATCATTCAATTTATTC+AGG - chr6.3:6076737-6076756 None:intergenic 20.0%
!! CATATAAACTTAATAAGAAG+AGG - chr6.3:6077303-6077322 None:intergenic 20.0%
!! CCTGAAAAATAATAAACAAT+TGG - chr6.3:6077720-6077739 None:intergenic 20.0%
!! CTAAAATCAAAATTGATATG+GGG - chr6.3:6077420-6077439 None:intergenic 20.0%
!! CTCTTCTTATTAAGTTTATA+TGG + chr6.3:6077301-6077320 MS.gene20471:intron 20.0%
!! GTTAACAAATGGTAAAATTT+AGG + chr6.3:6076216-6076235 MS.gene20471:intron 20.0%
!! TAAATATTCATCCATATATG+AGG - chr6.3:6078754-6078773 None:intergenic 20.0%
!! TAAGAATTGGTTAAAGAATT+CGG + chr6.3:6077482-6077501 MS.gene20471:intron 20.0%
!! TATTTATAGAAAATGATAGG+TGG - chr6.3:6077128-6077147 None:intergenic 20.0%
!!! AGTACTTAAAAATCGATTTT+TGG + chr6.3:6076275-6076294 MS.gene20471:intron 20.0%
!!! ATATCTGGAGTAATTTTTAA+AGG + chr6.3:6076490-6076509 MS.gene20471:intron 20.0%
!!! CCAATTGTTTATTATTTTTC+AGG + chr6.3:6077717-6077736 MS.gene20471:intron 20.0%
!!! CTCTAAAATCAAAATTGATA+TGG - chr6.3:6077422-6077441 None:intergenic 20.0%
!!! TATTTTTTTTACTTTCCCAA+TGG + chr6.3:6080786-6080805 MS.gene20471:intron 20.0%
!!! TGAAATAGTTAGTTTATCAA+TGG + chr6.3:6076310-6076329 MS.gene20471:intron 20.0%
!!! TTATATTTGTAGGATTTTGT+TGG + chr6.3:6080006-6080025 MS.gene20471:intron 20.0%
!!! TTGATAACATTGTTAACAAA+TGG + chr6.3:6076205-6076224 MS.gene20471:intron 20.0%
!!! TTTAGTTCATTTCATTTGAT+GGG + chr6.3:6075868-6075887 MS.gene20471:intron 20.0%
!!! TTTTAGTTCATTTCATTTGA+TGG + chr6.3:6075867-6075886 MS.gene20471:intron 20.0%
! AAACAAAAACCTCAACAATA+CGG - chr6.3:6075687-6075706 None:intergenic 25.0%
! AAATTACAATAACCTACTTC+GGG - chr6.3:6077838-6077857 None:intergenic 25.0%
! AAATTAGAATATCCAACAGT+TGG - chr6.3:6079839-6079858 None:intergenic 25.0%
! ACAAACATTTCATCTGAAAA+GGG + chr6.3:6076519-6076538 MS.gene20471:intron 25.0%
! ACTAACTATTTCACTTTCAT+TGG - chr6.3:6076303-6076322 None:intergenic 25.0%
! ATAACTCTTAATCTGAACAA+TGG - chr6.3:6075738-6075757 None:intergenic 25.0%
! ATAATAGGAATTAGGAATTC+AGG + chr6.3:6076399-6076418 MS.gene20471:intron 25.0%
! ATTTAGTTGCGGATTTAATA+AGG + chr6.3:6078243-6078262 MS.gene20471:intron 25.0%
! CAAATTACAATAACCTACTT+CGG - chr6.3:6077839-6077858 None:intergenic 25.0%
! CATGATGTTATTATTTCAAG+TGG + chr6.3:6081100-6081119 MS.gene20471:intron 25.0%
! GAAATATATATGAAGTAAGC+TGG - chr6.3:6076842-6076861 None:intergenic 25.0%
! GTAGTATAAGAAACGAAAAT+TGG - chr6.3:6077160-6077179 None:intergenic 25.0%
! TAAGTACTCAATTGTGTTAT+TGG - chr6.3:6076263-6076282 None:intergenic 25.0%
! TGTGCAATTTACGATATAAT+TGG - chr6.3:6080893-6080912 None:intergenic 25.0%
! TTTGTTGGAAAAATCATACA+GGG + chr6.3:6077363-6077382 MS.gene20471:intron 25.0%
!! AATAGTTAGTTTATCAATGG+TGG + chr6.3:6076313-6076332 MS.gene20471:intron 25.0%
!! ATATCGTAAATTGCACATTT+TGG + chr6.3:6080896-6080915 MS.gene20471:intron 25.0%
!! ATTTTCCACAAAAATCACAT+TGG - chr6.3:6078342-6078361 None:intergenic 25.0%
!! CAAAAACAAGTTTTACCATT+GGG - chr6.3:6080804-6080823 None:intergenic 25.0%
!! GAATCAAACTTATTTCTCAT+TGG - chr6.3:6077343-6077362 None:intergenic 25.0%
!! GCTGAAATGATTAAGTATTT+TGG + chr6.3:6076561-6076580 MS.gene20471:intron 25.0%
!! TCCATCCAAAATATTTTGTA+AGG - chr6.3:6078213-6078232 None:intergenic 25.0%
!! TGTAATAATAATGGGGTTTA+CGG + chr6.3:6076364-6076383 MS.gene20471:intron 25.0%
!! TTAGTTTATTGCTATTCGAT+AGG + chr6.3:6075831-6075850 MS.gene20471:intron 25.0%
!! TTTTCCACAAAAATCACATT+GGG - chr6.3:6078341-6078360 None:intergenic 25.0%
!!! AATGGTAAAACTTGTTTTTG+GGG + chr6.3:6080804-6080823 MS.gene20471:intron 25.0%
!!! CAATGGTAAAACTTGTTTTT+GGG + chr6.3:6080803-6080822 MS.gene20471:intron 25.0%
!!! TCCTTACAAAATATTTTGGA+TGG + chr6.3:6078209-6078228 MS.gene20471:intron 25.0%
AAAACTGGTATGGATACATT+AGG - chr6.3:6077082-6077101 None:intergenic 30.0%
AAAGAAAGAAGATGAAGAGT+TGG + chr6.3:6080314-6080333 MS.gene20471:CDS 30.0%
AATGGGAACTTTGTAAGAAT+TGG + chr6.3:6077469-6077488 MS.gene20471:intron 30.0%
ACTGTTGGAAATGCAAATTT+CGG + chr6.3:6078639-6078658 MS.gene20471:CDS 30.0%
ACTTGCTTGGAGTAAATATT+AGG + chr6.3:6076771-6076790 MS.gene20471:intron 30.0%
AGCTTATGCTAGAAGATAAT+TGG + chr6.3:6076948-6076967 MS.gene20471:intron 30.0%
AGTCAAAAATGGAAGGAAAA+TGG - chr6.3:6079959-6079978 None:intergenic 30.0%
ATAAGGTTATGACAACATCA+TGG + chr6.3:6079063-6079082 MS.gene20471:CDS 30.0%
ATAGTAAGATCAGTGATGAT+AGG - chr6.3:6075610-6075629 None:intergenic 30.0%
ATCAAAATTGATATGGGGTT+AGG - chr6.3:6077415-6077434 None:intergenic 30.0%
ATTCCTATTATATCCACCAT+AGG - chr6.3:6076390-6076409 None:intergenic 30.0%
CAAAATACATGTGCATTATG+TGG + chr6.3:6080357-6080376 MS.gene20471:CDS 30.0%
CATCGTCACAATTTACTTAT+AGG + chr6.3:6079603-6079622 MS.gene20471:CDS 30.0%
CTATTTCCTTGTATTCAGTA+AGG + chr6.3:6078469-6078488 MS.gene20471:intron 30.0%
CTATTTGTCTTACGTATCTT+GGG - chr6.3:6078134-6078153 None:intergenic 30.0%
CTGCATTTAGCATGAATAAT+GGG - chr6.3:6080498-6080517 None:intergenic 30.0%
CTTTGTTGGAAAAATCATAC+AGG + chr6.3:6077362-6077381 MS.gene20471:intron 30.0%
GAAATAAACGAGAATGAACA+AGG + chr6.3:6076687-6076706 MS.gene20471:intron 30.0%
GACAAACATTTCATCTGAAA+AGG + chr6.3:6076518-6076537 MS.gene20471:intron 30.0%
GCTTATGCTAGAAGATAATT+GGG + chr6.3:6076949-6076968 MS.gene20471:intron 30.0%
GGATTTAATAAGGATGTGTT+TGG + chr6.3:6078253-6078272 MS.gene20471:intron 30.0%
GTCAAAAATGGAAGGAAAAT+GGG - chr6.3:6079958-6079977 None:intergenic 30.0%
TAAACCAATTAGTAGCATCT+GGG + chr6.3:6075994-6076013 MS.gene20471:intron 30.0%
TAATCAATTTGTCCCAAGTA+GGG + chr6.3:6078680-6078699 MS.gene20471:CDS 30.0%
TAGATTTAGTTACCTGTGAA+GGG - chr6.3:6079910-6079929 None:intergenic 30.0%
TCAATATTTGAATTGAGACC+AGG - chr6.3:6079248-6079267 None:intergenic 30.0%
TCTATTTGTCTTACGTATCT+TGG - chr6.3:6078135-6078154 None:intergenic 30.0%
TCTGCATTTAGCATGAATAA+TGG - chr6.3:6080499-6080518 None:intergenic 30.0%
TGAATGATGTTGTCAAATAC+CGG + chr6.3:6076044-6076063 MS.gene20471:intron 30.0%
TGCATTTAGCATGAATAATG+GGG - chr6.3:6080497-6080516 None:intergenic 30.0%
TTAAACCAATTAGTAGCATC+TGG + chr6.3:6075993-6076012 MS.gene20471:intron 30.0%
TTAATCAATTTGTCCCAAGT+AGG + chr6.3:6078679-6078698 MS.gene20471:CDS 30.0%
TTTAGACAAGCTGTTAACTA+AGG + chr6.3:6076910-6076929 MS.gene20471:intron 30.0%
TTTGCAAAACATGACATAGA+AGG - chr6.3:6080960-6080979 None:intergenic 30.0%
! ATGACATATAGCCTTAGTAA+CGG + chr6.3:6078927-6078946 MS.gene20471:CDS 30.0%
! ATGGTGTGGAATTTTACAAA+AGG - chr6.3:6075719-6075738 None:intergenic 30.0%
! CACATAATGCACATGTATTT+TGG - chr6.3:6080359-6080378 None:intergenic 30.0%
! CCAAAAACAAGTTTTACCAT+TGG - chr6.3:6080805-6080824 None:intergenic 30.0%
! GAATAAATCTAGTTCAATGC+TGG - chr6.3:6080759-6080778 None:intergenic 30.0%
! GCACTCCTTACAAAATATTT+TGG + chr6.3:6078205-6078224 MS.gene20471:intron 30.0%
! TATGTCATGTTTTGCAAATG+TGG + chr6.3:6080962-6080981 MS.gene20471:intron 30.0%
! TGGTGGATATAATAGGAATT+AGG + chr6.3:6076391-6076410 MS.gene20471:intron 30.0%
! TGGTGTGGAATTTTACAAAA+GGG - chr6.3:6075718-6075737 None:intergenic 30.0%
! TTTTGCAAATGTGGATATCA+TGG + chr6.3:6080971-6080990 MS.gene20471:intron 30.0%
!! CCAATGGTAAAACTTGTTTT+TGG + chr6.3:6080802-6080821 MS.gene20471:intron 30.0%
!! TTGGCATTTATTGATTCGAA+TGG - chr6.3:6079386-6079405 None:intergenic 30.0%
!!! ATGGTAAAACTTGTTTTTGG+GGG + chr6.3:6080805-6080824 MS.gene20471:intron 30.0%
AACATTAGCGTATACTTGCT+TGG + chr6.3:6076758-6076777 MS.gene20471:intron 35.0%
AACTGCATCTCATTTAGTTG+CGG + chr6.3:6078232-6078251 MS.gene20471:intron 35.0%
AATAGTACCATTGTGAGTCA+TGG + chr6.3:6079404-6079423 MS.gene20471:CDS 35.0%
ACAAAAATCACATTGGGTTC+TGG - chr6.3:6078335-6078354 None:intergenic 35.0%
AGATTTAGTTACCTGTGAAG+GGG - chr6.3:6079909-6079928 None:intergenic 35.0%
AGTTTCCACACTAAACTTAG+TGG - chr6.3:6077585-6077604 None:intergenic 35.0%
ATAATATGACTGCCGAATTC+TGG - chr6.3:6080837-6080856 None:intergenic 35.0%
ATGACTCACAATGGTACTAT+TGG - chr6.3:6079405-6079424 None:intergenic 35.0%
ATTAATTCACTTATGGCCCA+AGG + chr6.3:6079860-6079879 MS.gene20471:CDS 35.0%
ATTGGAGACCATACAAATAG+CGG - chr6.3:6077702-6077721 None:intergenic 35.0%
CAAAGTCCTTACTGAATACA+AGG - chr6.3:6078478-6078497 None:intergenic 35.0%
CAACATCGTAATCATGCTAA+AGG + chr6.3:6075640-6075659 MS.gene20471:CDS 35.0%
CCAGTTAATAATCAACCATC+AGG + chr6.3:6078051-6078070 MS.gene20471:CDS 35.0%
CCTGATGGTTGATTATTAAC+TGG - chr6.3:6078054-6078073 None:intergenic 35.0%
CTCTACCTAATCCTTTAACT+AGG - chr6.3:6078839-6078858 None:intergenic 35.0%
GAAGTTAGCAGCGATTAAAT+AGG - chr6.3:6081079-6081098 None:intergenic 35.0%
GAATGATGTTGTCAAATACC+GGG + chr6.3:6076045-6076064 MS.gene20471:intron 35.0%
GACAGTATTGTGAAGAATGT+TGG + chr6.3:6077778-6077797 MS.gene20471:CDS 35.0%
GGAAATATAGGAGTTATGCT+GGG - chr6.3:6079341-6079360 None:intergenic 35.0%
GGATAGAAATGGTATGGATA+AGG + chr6.3:6079046-6079065 MS.gene20471:CDS 35.0%
GGATTCTTCGATGGAAATAT+AGG - chr6.3:6079353-6079372 None:intergenic 35.0%
GTAGATTTAGTTACCTGTGA+AGG - chr6.3:6079911-6079930 None:intergenic 35.0%
GTTGATTATGGCCTAGTTAA+AGG + chr6.3:6078825-6078844 MS.gene20471:CDS 35.0%
TAAGTAAATTGTGACGATGC+TGG - chr6.3:6079602-6079621 None:intergenic 35.0%
TATGGCCTAGTTAAAGGATT+AGG + chr6.3:6078831-6078850 MS.gene20471:CDS 35.0%
TATTTAGCTGACAATTCCAC+TGG + chr6.3:6078768-6078787 MS.gene20471:CDS 35.0%
TATTTGCAACCGTATTGTTG+AGG + chr6.3:6075675-6075694 MS.gene20471:CDS 35.0%
TCACAAATCGCAGAAAATAG+TGG - chr6.3:6076185-6076204 None:intergenic 35.0%
TCACAATAGATTGCAACACT+AGG + chr6.3:6080995-6081014 MS.gene20471:intron 35.0%
TCACTGTAAAACTCCTCAAA+AGG - chr6.3:6080387-6080406 None:intergenic 35.0%
TCCATCACAAAATCTTCAGA+CGG - chr6.3:6080534-6080553 None:intergenic 35.0%
TCTAGGAAGATTACCGTATA+AGG - chr6.3:6080085-6080104 None:intergenic 35.0%
TCTGATGAGAAACCAATAGT+TGG - chr6.3:6079173-6079192 None:intergenic 35.0%
TCTTAATCTGAACAATGGTG+TGG - chr6.3:6075733-6075752 None:intergenic 35.0%
TGAACAATTTCTTCCGTTGA+AGG - chr6.3:6075544-6075563 None:intergenic 35.0%
TGCTGTATCTTTGTCAACAT+TGG + chr6.3:6077228-6077247 MS.gene20471:intron 35.0%
TGGAAATATAGGAGTTATGC+TGG - chr6.3:6079342-6079361 None:intergenic 35.0%
TTAACATGTATCCCATGAGT+AGG - chr6.3:6078111-6078130 None:intergenic 35.0%
TTACAAAGTTCCCATTTCAG+AGG - chr6.3:6077465-6077484 None:intergenic 35.0%
TTATTCCATTAGGCGCATTA+AGG - chr6.3:6080446-6080465 None:intergenic 35.0%
! AAATCCTCACAGCTTTTCAT+CGG + chr6.3:6076614-6076633 MS.gene20471:intron 35.0%
! AAGAGTTGTTTCCGATTCTT+TGG - chr6.3:6079709-6079728 None:intergenic 35.0%
! AGAACCCAATGTGATTTTTG+TGG + chr6.3:6078334-6078353 MS.gene20471:intron 35.0%
! AGGGATTCTTACAGAAGTAT+TGG + chr6.3:6077382-6077401 MS.gene20471:intron 35.0%
! ATCTTCTTTCTTTTCCTCAG+TGG - chr6.3:6080307-6080326 None:intergenic 35.0%
! ATGCCTGTTGTTATTCCATT+AGG - chr6.3:6080456-6080475 None:intergenic 35.0%
! ATTATGTGGAGAACCTTTTG+AGG + chr6.3:6080371-6080390 MS.gene20471:CDS 35.0%
! CGGCAGTCATATTATTCTTT+TGG + chr6.3:6080842-6080861 MS.gene20471:intron 35.0%
! CTAGAAGATAATTGGGTTGT+TGG + chr6.3:6076956-6076975 MS.gene20471:intron 35.0%
! GAAGAAATCTAGTTCAATGC+TGG - chr6.3:6080637-6080656 None:intergenic 35.0%
! GCATGATGAGTTATGTGTTT+TGG - chr6.3:6077542-6077561 None:intergenic 35.0%
! GGAGTTTTACAGTGATGAAA+CGG + chr6.3:6080392-6080411 MS.gene20471:CDS 35.0%
! GGTGTGGAATTTTACAAAAG+GGG - chr6.3:6075717-6075736 None:intergenic 35.0%
! GTGTGGAATTTTACAAAAGG+GGG - chr6.3:6075716-6075735 None:intergenic 35.0%
! TATAGTTCTATTGTCTGCCT+AGG + chr6.3:6077897-6077916 MS.gene20471:intron 35.0%
!! AGAAGTATCGAACATATTCC+TGG - chr6.3:6077804-6077823 None:intergenic 35.0%
!! GCTTACGGTTTTTAGACATA+CGG - chr6.3:6080185-6080204 None:intergenic 35.0%
!!! AAGATTTTGTGATGGACGAA+GGG + chr6.3:6080538-6080557 MS.gene20471:CDS 35.0%
!!! TTTGATGGGTTTCACAGTTT+TGG + chr6.3:6075882-6075901 MS.gene20471:intron 35.0%
AAGAGTTCTCTGTTGCTAGA+GGG - chr6.3:6078538-6078557 None:intergenic 40.0%
AAGATCTTCCAACCCTACTT+GGG - chr6.3:6078695-6078714 None:intergenic 40.0%
AATATAGGAGTTATGCTGGG+AGG - chr6.3:6079338-6079357 None:intergenic 40.0%
AATATCCAACAGTTGGCTGT+TGG - chr6.3:6079832-6079851 None:intergenic 40.0%
ACTCACAAACCATTTACGAG+AGG - chr6.3:6080214-6080233 None:intergenic 40.0%
AGAAACCAATAGTTGGTTGC+AGG - chr6.3:6079166-6079185 None:intergenic 40.0%
AGCCAATGAGATTACACCTT+GGG - chr6.3:6079879-6079898 None:intergenic 40.0%
ATCAGGCGTTAATTCCCTTA+GGG + chr6.3:6078068-6078087 MS.gene20471:CDS 40.0%
ATGCAACTTCTTCAGTGTCA+AGG + chr6.3:6079216-6079235 MS.gene20471:CDS 40.0%
ATGGCAGAATACTGAAGAAG+AGG + chr6.3:6079082-6079101 MS.gene20471:CDS 40.0%
ATTGCCCAGATGCTACTAAT+TGG - chr6.3:6076001-6076020 None:intergenic 40.0%
CAAAAAACCTGGAGCTGATT+CGG - chr6.3:6080274-6080293 None:intergenic 40.0%
CACCAAGAATTGGACTTGAT+AGG + chr6.3:6078721-6078740 MS.gene20471:CDS 40.0%
CATCACAAAATCTTCAGACG+GGG - chr6.3:6080532-6080551 None:intergenic 40.0%
CCATAATCAACAGCATGATG+GGG - chr6.3:6078816-6078835 None:intergenic 40.0%
CCATCACAAAATCTTCAGAC+GGG - chr6.3:6080533-6080552 None:intergenic 40.0%
CGCATAGCAGAATGTAAACT+TGG - chr6.3:6077952-6077971 None:intergenic 40.0%
CTATCAAGTCCAATTCTTGG+TGG - chr6.3:6078723-6078742 None:intergenic 40.0%
CTCACAAACCATTTACGAGA+GGG - chr6.3:6080213-6080232 None:intergenic 40.0%
GAATAACAACAGGCATAGAC+AGG + chr6.3:6080460-6080479 MS.gene20471:CDS 40.0%
GACAAAAGCCAAGAAACTTC+TGG + chr6.3:6078996-6079015 MS.gene20471:CDS 40.0%
GACTTTGTTCTACGTGAAAC+TGG + chr6.3:6078491-6078510 MS.gene20471:intron 40.0%
GAGAAATTCGCAACCTTCAA+CGG + chr6.3:6075528-6075547 MS.gene20471:CDS 40.0%
GATGAAAAGCTGTGAGGATT+TGG - chr6.3:6076615-6076634 None:intergenic 40.0%
GATGTATTCTGACAGTGTGT+TGG + chr6.3:6078572-6078591 MS.gene20471:intron 40.0%
GATTAGACCATGACTCACAA+TGG - chr6.3:6079414-6079433 None:intergenic 40.0%
GCAAAACATGACATAGAAGG+CGG - chr6.3:6080957-6080976 None:intergenic 40.0%
GCAAGCAAGTCAAAAATGGA+AGG - chr6.3:6079966-6079985 None:intergenic 40.0%
GCAGTCAAAGAAAACGAATG+CGG + chr6.3:6081207-6081226 MS.gene20471:CDS 40.0%
GCCATAATCAACAGCATGAT+GGG - chr6.3:6078817-6078836 None:intergenic 40.0%
GGAAACCATTACTTCTACCA+TGG - chr6.3:6079145-6079164 None:intergenic 40.0%
GGTGGAAAAAACTGGAATGA+CGG - chr6.3:6079572-6079591 None:intergenic 40.0%
GTAAGCCTTTGTTAGTTGAG+CGG + chr6.3:6079021-6079040 MS.gene20471:CDS 40.0%
GTAGACCATGGTAGAAGTAA+TGG + chr6.3:6079137-6079156 MS.gene20471:CDS 40.0%
GTATACCTTAATGCGCCTAA+TGG + chr6.3:6080438-6080457 MS.gene20471:CDS 40.0%
GTGTTGTCAAATTGCCACTA+TGG - chr6.3:6076457-6076476 None:intergenic 40.0%
GTTCGCAAGCAAGTCAAAAA+TGG - chr6.3:6079970-6079989 None:intergenic 40.0%
TAGCCAATGAGATTACACCT+TGG - chr6.3:6079880-6079899 None:intergenic 40.0%
TAGGCATATGCCCTCATATA+TGG + chr6.3:6078740-6078759 MS.gene20471:CDS 40.0%
TAGGCATCAATTAGTGCTCT+TGG - chr6.3:6078969-6078988 None:intergenic 40.0%
TATTGTGAAGAATGTTGGCC+AGG + chr6.3:6077783-6077802 MS.gene20471:CDS 40.0%
TCAATCTTCCGTAAGACAGA+AGG - chr6.3:6078009-6078028 None:intergenic 40.0%
TCGAATCTCCGCTATTTGTA+TGG + chr6.3:6077691-6077710 MS.gene20471:intron 40.0%
TCTGCAATCAGTGCCTTATA+CGG + chr6.3:6080069-6080088 MS.gene20471:CDS 40.0%
TGAAGAAGAGGAGTTCGATT+GGG + chr6.3:6079094-6079113 MS.gene20471:CDS 40.0%
TGACACTGAAGAAGTTGCAT+TGG - chr6.3:6079216-6079235 None:intergenic 40.0%
TGCAACTTCTTCAGTGTCAA+GGG + chr6.3:6079217-6079236 MS.gene20471:CDS 40.0%
TGCCTATCAAGTCCAATTCT+TGG - chr6.3:6078726-6078745 None:intergenic 40.0%
TGTTTCCCTCTTTGTATGCA+GGG + chr6.3:6081170-6081189 MS.gene20471:intron 40.0%
TTACACGAAATTATGTGCCC+TGG - chr6.3:6076349-6076368 None:intergenic 40.0%
TTAGACTCAACAGGAACTGT+TGG + chr6.3:6078624-6078643 MS.gene20471:CDS 40.0%
TTAGGAATTCAGGACGATGA+TGG + chr6.3:6076409-6076428 MS.gene20471:intron 40.0%
TTCCATCGAAGAATCCTGTT+AGG + chr6.3:6079357-6079376 MS.gene20471:CDS 40.0%
TTCCGACTATCACCAGAAAA+CGG - chr6.3:6078891-6078910 None:intergenic 40.0%
TTCCTAACAGGATTCTTCGA+TGG - chr6.3:6079362-6079381 None:intergenic 40.0%
TTGTTTCCCTCTTTGTATGC+AGG + chr6.3:6081169-6081188 MS.gene20471:intron 40.0%
TTTGTTCAAATTCCGCTACC+CGG - chr6.3:6076066-6076085 None:intergenic 40.0%
! AGAGCACTAATTGATGCCTA+TGG + chr6.3:6078969-6078988 MS.gene20471:CDS 40.0%
! GAAAATGATAGGTGGTGATG+AGG - chr6.3:6077120-6077139 None:intergenic 40.0%
! GATTCGAATGGATTCCTAAC+AGG - chr6.3:6079374-6079393 None:intergenic 40.0%
! GTAAGGAGTGCAGATTTGAA+GGG - chr6.3:6078196-6078215 None:intergenic 40.0%
! GTTTTACAGTGATGAAACGG+AGG + chr6.3:6080395-6080414 MS.gene20471:CDS 40.0%
! TATGCTACAGTGCTGCTATA+GGG - chr6.3:6076146-6076165 None:intergenic 40.0%
! TGTAAGGAGTGCAGATTTGA+AGG - chr6.3:6078197-6078216 None:intergenic 40.0%
! TTTCTTTTCCTCAGTGGTCT+CGG - chr6.3:6080301-6080320 None:intergenic 40.0%
!! AATGGTGGATTATAGAAGCC+AGG + chr6.3:6076328-6076347 MS.gene20471:intron 40.0%
!! ACCAATCTCTCCTCTGAAAT+GGG + chr6.3:6077452-6077471 MS.gene20471:intron 40.0%
!! ATGGTGGATTATAGAAGCCA+GGG + chr6.3:6076329-6076348 MS.gene20471:intron 40.0%
!! GGTACAAATGGACTAGGATT+GGG - chr6.3:6079806-6079825 None:intergenic 40.0%
!! TGGTACAAATGGACTAGGAT+TGG - chr6.3:6079807-6079826 None:intergenic 40.0%
!! TTGGCTTTTGTCACTACCAT+AGG - chr6.3:6078988-6079007 None:intergenic 40.0%
!! TTTTGGCAACTTGCTCAAGT+TGG + chr6.3:6076578-6076597 MS.gene20471:intron 40.0%
!!! ACATGTATTTTGGTCCTCGT+CGG - chr6.3:6080349-6080368 None:intergenic 40.0%
!!! AGATTTTGTGATGGACGAAG+GGG + chr6.3:6080539-6080558 MS.gene20471:CDS 40.0%
!!! ATTCCAGTTTTTTCCACCTC+AGG + chr6.3:6079574-6079593 MS.gene20471:CDS 40.0%
!!! GAAGATTTTGTGATGGACGA+AGG + chr6.3:6080537-6080556 MS.gene20471:CDS 40.0%
AAACATGACATAGAAGGCGG+CGG - chr6.3:6080954-6080973 None:intergenic 45.0%
AAAGCTGCAGGCAAAACTGT+TGG - chr6.3:6079278-6079297 None:intergenic 45.0%
AACAGGTCGTACATTTGGCA+GGG - chr6.3:6079666-6079685 None:intergenic 45.0%
AACGTCGTGAAGAAGATCCT+AGG + chr6.3:6075503-6075522 MS.gene20471:CDS 45.0%
AACTCCGATGAAAAGCTGTG+AGG - chr6.3:6076621-6076640 None:intergenic 45.0%
AATCGACCAACGAGGATTGA+TGG - chr6.3:6075466-6075485 None:intergenic 45.0%
AATCTCCTCGACCTACTCAT+GGG + chr6.3:6078097-6078116 MS.gene20471:CDS 45.0%
ACACGCCACTAAGTTTAGTG+TGG + chr6.3:6077577-6077596 MS.gene20471:intron 45.0%
ACCATGTTGTACTGCCATAG+TGG + chr6.3:6076440-6076459 MS.gene20471:intron 45.0%
ACGTGGAGCATGCACATTTA+CGG - chr6.3:6079315-6079334 None:intergenic 45.0%
ACTTATAGGCCATCTTTGCC+AGG + chr6.3:6079617-6079636 MS.gene20471:CDS 45.0%
AGATGAAGAGTTGGCTGTTC+CGG + chr6.3:6080323-6080342 MS.gene20471:CDS 45.0%
AGGAGATTCAGAAGCCCTAA+GGG - chr6.3:6078085-6078104 None:intergenic 45.0%
ATAGATTGCAACACTAGGCG+TGG + chr6.3:6081000-6081019 MS.gene20471:intron 45.0%
ATAGCAGCACTGTAGCATAG+CGG + chr6.3:6076147-6076166 MS.gene20471:intron 45.0%
ATCAGACCAGGAAGCTGATT+AGG - chr6.3:6079518-6079537 None:intergenic 45.0%
ATCTTCCGTAAGACAGAAGG+AGG - chr6.3:6078006-6078025 None:intergenic 45.0%
CAAGAGTTCTCTGTTGCTAG+AGG - chr6.3:6078539-6078558 None:intergenic 45.0%
CAATTTGTCCCAAGTAGGGT+TGG + chr6.3:6078684-6078703 MS.gene20471:CDS 45.0%
CATCAGGCGTTAATTCCCTT+AGG + chr6.3:6078067-6078086 MS.gene20471:CDS 45.0%
CTAAGGGAATTAACGCCTGA+TGG - chr6.3:6078069-6078088 None:intergenic 45.0%
CTACAAGCAACCTAAAACCC+AGG - chr6.3:6076665-6076684 None:intergenic 45.0%
CTACCATGGTCTACTACTGT+CGG - chr6.3:6079131-6079150 None:intergenic 45.0%
CTGAAGAAGAGGAGTTCGAT+TGG + chr6.3:6079093-6079112 MS.gene20471:CDS 45.0%
CTGTCCAAGAGATAGAGTGA+AGG - chr6.3:6077763-6077782 None:intergenic 45.0%
GAAGATCTTCCAACCCTACT+TGG - chr6.3:6078696-6078715 None:intergenic 45.0%
GACGGTGTTTGTACACTGTT+TGG - chr6.3:6079554-6079573 None:intergenic 45.0%
GAGAAGAAGAGTTGAGTGAG+TGG + chr6.3:6078856-6078875 MS.gene20471:CDS 45.0%
GAGAGAACGCAAAACTGGTA+TGG - chr6.3:6077092-6077111 None:intergenic 45.0%
GATCCTGAGGTGGAAAAAAC+TGG - chr6.3:6079580-6079599 None:intergenic 45.0%
GCGCCTAATGGAATAACAAC+AGG + chr6.3:6080450-6080469 MS.gene20471:CDS 45.0%
GCTACCTTCACTCTATCTCT+TGG + chr6.3:6077756-6077775 MS.gene20471:CDS 45.0%
GCTCGTCTTGGGATTTGAAT+CGG - chr6.3:6080128-6080147 None:intergenic 45.0%
GCTGATTAGGTAGCTGATAC+AGG - chr6.3:6079505-6079524 None:intergenic 45.0%
GCTTACTGCCAGAAGTTTCT+TGG - chr6.3:6079007-6079026 None:intergenic 45.0%
GGCATAACAGGTCGTACATT+TGG - chr6.3:6079671-6079690 None:intergenic 45.0%
GGCCATAATCAACAGCATGA+TGG - chr6.3:6078818-6078837 None:intergenic 45.0%
GGGTTAGATGAAATCAGACC+AGG - chr6.3:6079530-6079549 None:intergenic 45.0%
GGTGAAAGGTTAGACTCAAC+AGG + chr6.3:6078615-6078634 MS.gene20471:CDS 45.0%
GGTGTTTGTACACTGTTTGG+CGG - chr6.3:6079551-6079570 None:intergenic 45.0%
GGTTGCGAATTTCTCAACCT+AGG - chr6.3:6075523-6075542 None:intergenic 45.0%
GGTTGTTCATGCACAGGAAA+AGG - chr6.3:6079443-6079462 None:intergenic 45.0%
GGTTTCCTGCAACCAACTAT+TGG + chr6.3:6079158-6079177 MS.gene20471:CDS 45.0%
GTGTTTGTACACTGTTTGGC+GGG - chr6.3:6079550-6079569 None:intergenic 45.0%
GTTTGATCCAGACACTCTGA+AGG + chr6.3:6080035-6080054 MS.gene20471:CDS 45.0%
TAACAGGTCGTACATTTGGC+AGG - chr6.3:6079667-6079686 None:intergenic 45.0%
TAGCTGACAATTCCACTGGT+AGG + chr6.3:6078772-6078791 MS.gene20471:CDS 45.0%
TCCCATTTCAGAGGAGAGAT+TGG - chr6.3:6077456-6077475 None:intergenic 45.0%
TCTGCTATGCGACATCTCTT+TGG + chr6.3:6077961-6077980 MS.gene20471:CDS 45.0%
TCTTCCCTCCTTCTGTCTTA+CGG + chr6.3:6077998-6078017 MS.gene20471:CDS 45.0%
TCTTCCGTAAGACAGAAGGA+GGG - chr6.3:6078005-6078024 None:intergenic 45.0%
TCTTCGTCACCACCAAGAAT+TGG + chr6.3:6078711-6078730 MS.gene20471:CDS 45.0%
TCTTTGACTGCCTTCGTCAT+AGG - chr6.3:6081198-6081217 None:intergenic 45.0%
TGCCTCATTTCAAAAGCTGC+AGG - chr6.3:6079290-6079309 None:intergenic 45.0%
TGTCTTACGGAAGATTGACG+TGG + chr6.3:6078011-6078030 MS.gene20471:CDS 45.0%
TGTTGTCAAATACCGGGTAG+CGG + chr6.3:6076051-6076070 MS.gene20471:intron 45.0%
TTGTTTCCGATTCTTTGGCC+TGG - chr6.3:6079704-6079723 None:intergenic 45.0%
! AATCCTCGTTGGTCGATTCA+AGG + chr6.3:6075468-6075487 MS.gene20471:CDS 45.0%
! ATAATGGGGTTTACGGCCTA+TGG + chr6.3:6076371-6076390 MS.gene20471:intron 45.0%
! CACCAATCTCTCCTCTGAAA+TGG + chr6.3:6077451-6077470 MS.gene20471:intron 45.0%
! CCCCATCATGCTGTTGATTA+TGG + chr6.3:6078813-6078832 MS.gene20471:CDS 45.0%
! CCCGTCTGAAGATTTTGTGA+TGG + chr6.3:6080530-6080549 MS.gene20471:CDS 45.0%
! CTATGCTACAGTGCTGCTAT+AGG - chr6.3:6076147-6076166 None:intergenic 45.0%
! GTGAATGCTACCTGGGTTTT+AGG + chr6.3:6076652-6076671 MS.gene20471:intron 45.0%
!! AATGGACTAGGATTGGGATG+AGG - chr6.3:6079800-6079819 None:intergenic 45.0%
!! AGCCGTTTTCTGGTGATAGT+CGG + chr6.3:6078886-6078905 MS.gene20471:CDS 45.0%
!! AGTGCTCTTGGATTTTGACG+TGG - chr6.3:6078957-6078976 None:intergenic 45.0%
!! CGGCCTATGGTGGATATAAT+AGG + chr6.3:6076384-6076403 MS.gene20471:intron 45.0%
!! TGGCTTGGTACAAATGGACT+AGG - chr6.3:6079812-6079831 None:intergenic 45.0%
!! TGTGTTGGTTTCATCCTCAC+AGG + chr6.3:6078587-6078606 MS.gene20471:intron 45.0%
!!! TGCCTGCAGCTTTTGAAATG+AGG + chr6.3:6079285-6079304 MS.gene20471:CDS 45.0%
!! ATTTAAAAAAAAAAAAACTT+AGG - chr6.3:6079934-6079953 None:intergenic 5.0%
!! TTTAAAAAAAAAAAAACTTA+GGG - chr6.3:6079933-6079952 None:intergenic 5.0%
AAGCCTTGAATCGACCAACG+AGG - chr6.3:6075474-6075493 None:intergenic 50.0%
ACAGGTCGTACATTTGGCAG+GGG - chr6.3:6079665-6079684 None:intergenic 50.0%
ACAGTGATGAAACGGAGGAG+TGG + chr6.3:6080400-6080419 MS.gene20471:CDS 50.0%
ACGGAGGAGTGGATGTATAG+AGG + chr6.3:6080411-6080430 MS.gene20471:CDS 50.0%
AGCACAGCAGTCACATGGAT+TGG + chr6.3:6080145-6080164 MS.gene20471:CDS 50.0%
AGCAGAAGCCCTCTCGTAAA+TGG + chr6.3:6080202-6080221 MS.gene20471:CDS 50.0%
AGGTGCCCTGCATACAAAGA+GGG - chr6.3:6081178-6081197 None:intergenic 50.0%
AGTCCGACAGTAGTAGACCA+TGG + chr6.3:6079125-6079144 MS.gene20471:CDS 50.0%
AGTGAGACGATGTGGCTTAG+TGG + chr6.3:6080231-6080250 MS.gene20471:CDS 50.0%
ATTGGGATGAGGTGGCATCT+GGG - chr6.3:6079789-6079808 None:intergenic 50.0%
CAGCTACCTAATCAGCTTCC+TGG + chr6.3:6079509-6079528 MS.gene20471:CDS 50.0%
CCACAAGTTGTGCACTGTCT+AGG - chr6.3:6080102-6080121 None:intergenic 50.0%
CCTAGACAGTGCACAACTTG+TGG + chr6.3:6080099-6080118 MS.gene20471:CDS 50.0%
CCTTTGCCAGGCCAAAGAAT+CGG + chr6.3:6079695-6079714 MS.gene20471:CDS 50.0%
CGATTCTTTGGCCTGGCAAA+GGG - chr6.3:6079697-6079716 None:intergenic 50.0%
CGTCTTGGGATTTGAATCGG+AGG - chr6.3:6080125-6080144 None:intergenic 50.0%
CTCATAGCATGACCATGTCC+TGG - chr6.3:6079638-6079657 None:intergenic 50.0%
CTGCAGGCAAAACTGTTGGA+CGG - chr6.3:6079274-6079293 None:intergenic 50.0%
CTTGGGAGAGAACGCAAAAC+TGG - chr6.3:6077097-6077116 None:intergenic 50.0%
GAATCTCCTCGACCTACTCA+TGG + chr6.3:6078096-6078115 MS.gene20471:CDS 50.0%
GACGTGGTTGTCCGTTACTA+AGG - chr6.3:6078941-6078960 None:intergenic 50.0%
GAGGAGATTCAGAAGCCCTA+AGG - chr6.3:6078086-6078105 None:intergenic 50.0%
GCCACTATGGCAGTACAACA+TGG - chr6.3:6076444-6076463 None:intergenic 50.0%
GCGGCTGGATAGAAATGGTA+TGG + chr6.3:6079040-6079059 MS.gene20471:CDS 50.0%
GGCCCAAGGTGTAATCTCAT+TGG + chr6.3:6079874-6079893 MS.gene20471:CDS 50.0%
GGTTTGTGAGTGAGACGATG+TGG + chr6.3:6080223-6080242 MS.gene20471:CDS 50.0%
GTATGCCACGCAGAAAACCT+AGG - chr6.3:6077917-6077936 None:intergenic 50.0%
GTCAACATTGGCGATCTCAG+AGG + chr6.3:6077240-6077259 MS.gene20471:intron 50.0%
GTCTCGGTTGGCAAAAAACC+TGG - chr6.3:6080285-6080304 None:intergenic 50.0%
GTTGAGCGGCTGGATAGAAA+TGG + chr6.3:6079035-6079054 MS.gene20471:CDS 50.0%
GTTTCATCCTCACAGGTTGC+AGG + chr6.3:6078594-6078613 MS.gene20471:intron 50.0%
TAACCTACTTCGGGTAGACG+CGG - chr6.3:6077829-6077848 None:intergenic 50.0%
TACGAGAGGGCTTCTGCTTA+CGG - chr6.3:6080200-6080219 None:intergenic 50.0%
TAGGTGCCCTGCATACAAAG+AGG - chr6.3:6081179-6081198 None:intergenic 50.0%
TCCAGCCGCTCAACTAACAA+AGG - chr6.3:6079029-6079048 None:intergenic 50.0%
TCTCTCAACTGTCCTACCAG+TGG - chr6.3:6078787-6078806 None:intergenic 50.0%
TGACCATGTCCTGGCAAAGA+TGG - chr6.3:6079629-6079648 None:intergenic 50.0%
TGCGACATCTCTTTGGTACC+TGG + chr6.3:6077968-6077987 MS.gene20471:CDS 50.0%
TGCGTGTGTGAATGCTACCT+GGG + chr6.3:6076645-6076664 MS.gene20471:intron 50.0%
TGGGGGAGAGATCCAGAATT+CGG + chr6.3:6080822-6080841 MS.gene20471:intron 50.0%
TGTATCCCATGAGTAGGTCG+AGG - chr6.3:6078105-6078124 None:intergenic 50.0%
TTGTTCTCAACACCGTGCTG+CGG - chr6.3:6079464-6079483 None:intergenic 50.0%
! AGGAGGGAAGACTTTTGACC+AGG - chr6.3:6077989-6078008 None:intergenic 50.0%
! GATAGGTGGTGATGAGGCTT+GGG - chr6.3:6077114-6077133 None:intergenic 50.0%
! TGACGAACCTTCAGAGTGTC+TGG - chr6.3:6080045-6080064 None:intergenic 50.0%
! TGATAGGTGGTGATGAGGCT+TGG - chr6.3:6077115-6077134 None:intergenic 50.0%
! TTTTCCTCAGTGGTCTCGGT+TGG - chr6.3:6080297-6080316 None:intergenic 50.0%
!! CTTAGTGGTGCAGAGGCATT+GGG + chr6.3:6080246-6080265 MS.gene20471:CDS 50.0%
!! GGCTGTTGGCTTGGTACAAA+TGG - chr6.3:6079818-6079837 None:intergenic 50.0%
!! TCAGTGTCAAGGGTGTTTCC+TGG + chr6.3:6079227-6079246 MS.gene20471:CDS 50.0%
AGACGAGCACAGCAGTCACA+TGG + chr6.3:6080140-6080159 MS.gene20471:CDS 55.0%
AGGCCATCTTTGCCAGGACA+TGG + chr6.3:6079623-6079642 MS.gene20471:CDS 55.0%
ATGGGGTTTACGGCCTATGG+TGG + chr6.3:6076374-6076393 MS.gene20471:intron 55.0%
CAGGTCGTACATTTGGCAGG+GGG - chr6.3:6079664-6079683 None:intergenic 55.0%
CCAAGCCAACAGCCAACTGT+TGG + chr6.3:6079824-6079843 MS.gene20471:CDS 55.0%
CCGATTCTTTGGCCTGGCAA+AGG - chr6.3:6079698-6079717 None:intergenic 55.0%
CCTCACAGGTTGCAGGTGAA+AGG + chr6.3:6078601-6078620 MS.gene20471:intron 55.0%
CCTCCACCATCAATCCTCGT+TGG + chr6.3:6075457-6075476 MS.gene20471:CDS 55.0%
CCTTTCACCTGCAACCTGTG+AGG - chr6.3:6078604-6078623 None:intergenic 55.0%
CGACCAACGAGGATTGATGG+TGG - chr6.3:6075463-6075482 None:intergenic 55.0%
GATGTGGCTTAGTGGTGCAG+AGG + chr6.3:6080239-6080258 MS.gene20471:CDS 55.0%
GATTGGGATGAGGTGGCATC+TGG - chr6.3:6079790-6079809 None:intergenic 55.0%
GCCTTTGTTAGTTGAGCGGC+TGG + chr6.3:6079025-6079044 MS.gene20471:CDS 55.0%
GGACTAGGATTGGGATGAGG+TGG - chr6.3:6079797-6079816 None:intergenic 55.0%
GGCAAAGGGAGTGGCATAAC+AGG - chr6.3:6079683-6079702 None:intergenic 55.0%
GGCATAGACAGGTCGCAGTT+AGG + chr6.3:6080471-6080490 MS.gene20471:CDS 55.0%
GGCTAATCAAGCCCCTTCAC+AGG + chr6.3:6079895-6079914 MS.gene20471:CDS 55.0%
GTGACTGCTGTGCTCGTCTT+GGG - chr6.3:6080139-6080158 None:intergenic 55.0%
GTGCATGAACAACCGCAGCA+CGG + chr6.3:6079449-6079468 MS.gene20471:CDS 55.0%
GTGCGTGTGTGAATGCTACC+TGG + chr6.3:6076644-6076663 MS.gene20471:intron 55.0%
GTTATGCCACTCCCTTTGCC+AGG + chr6.3:6079683-6079702 MS.gene20471:CDS 55.0%
TGCTGCGGTTGTTCATGCAC+AGG - chr6.3:6079449-6079468 None:intergenic 55.0%
TGTAGGCCAGGTGGAGGTAA+AGG - chr6.3:6079758-6079777 None:intergenic 55.0%
TGTGACGATGCTGGATCCTG+AGG - chr6.3:6079593-6079612 None:intergenic 55.0%
TGTGACTGCTGTGCTCGTCT+TGG - chr6.3:6080140-6080159 None:intergenic 55.0%
TTGCGACCTTTACCTCCACC+TGG + chr6.3:6079749-6079768 MS.gene20471:CDS 55.0%
TTTGCCAACCGAGACCACTG+AGG + chr6.3:6080290-6080309 MS.gene20471:CDS 55.0%
! ATGCAGGGCACCTATGACGA+AGG + chr6.3:6081185-6081204 MS.gene20471:intron 55.0%
! CCAACAGTTGGCTGTTGGCT+TGG - chr6.3:6079827-6079846 None:intergenic 55.0%
! GCTTAGTGGTGCAGAGGCAT+TGG + chr6.3:6080245-6080264 MS.gene20471:CDS 55.0%
! GTCTGCCTAGGTTTTCTGCG+TGG + chr6.3:6077909-6077928 MS.gene20471:intron 55.0%
!! CCAACGAGGATTGATGGTGG+AGG - chr6.3:6075460-6075479 None:intergenic 55.0%
!! GCATTGGCTGCAACAGTAGC+AGG - chr6.3:6079200-6079219 None:intergenic 55.0%
!! TGGTCGCGAAAGCCGTTTTC+TGG + chr6.3:6078876-6078895 MS.gene20471:CDS 55.0%
!!! GTATTTTGGTCCTCGTCGGC+CGG - chr6.3:6080345-6080364 None:intergenic 55.0%
AAGGTCGCAAAGCTCCTCCC+TGG - chr6.3:6079739-6079758 None:intergenic 60.0%
CTTTGGCCTGGCAAAGGGAG+TGG - chr6.3:6079692-6079711 None:intergenic 60.0%
GACGATGCTGGATCCTGAGG+TGG - chr6.3:6079590-6079609 None:intergenic 60.0%
GGAGTTATGCTGGGAGGACG+TGG - chr6.3:6079332-6079351 None:intergenic 60.0%
GGATGAGGTGGCATCTGGGA+TGG - chr6.3:6079785-6079804 None:intergenic 60.0%
TCACCGCGTCTACCCGAAGT+AGG + chr6.3:6077823-6077842 MS.gene20471:intron 60.0%
TTGGGAGCCGAATCAGCTCC+AGG + chr6.3:6080264-6080283 MS.gene20471:CDS 60.0%
! GCATCTGGGATGGAGCGTGT+AGG - chr6.3:6079775-6079794 None:intergenic 60.0%
GATGGAGCGTGTAGGCCAGG+TGG - chr6.3:6079767-6079786 None:intergenic 65.0%
TGGGATGGAGCGTGTAGGCC+AGG - chr6.3:6079770-6079789 None:intergenic 65.0%
GGAGCGTGTAGGCCAGGTGG+AGG - chr6.3:6079764-6079783 None:intergenic 70.0%
GTTGGCTGTTCCGGCCGACG+AGG + chr6.3:6080332-6080351 MS.gene20471:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 6075433 6081235 6075433 ID=MS.gene20471
chr6.3 mRNA 6075433 6081235 6075433 ID=MS.gene20471.t1;Parent=MS.gene20471
chr6.3 exon 6075433 6075696 6075433 ID=MS.gene20471.t1.exon1;Parent=MS.gene20471.t1
chr6.3 CDS 6075433 6075696 6075433 ID=cds.MS.gene20471.t1;Parent=MS.gene20471.t1
chr6.3 exon 6077739 6077840 6077739 ID=MS.gene20471.t1.exon2;Parent=MS.gene20471.t1
chr6.3 CDS 6077739 6077840 6077739 ID=cds.MS.gene20471.t1;Parent=MS.gene20471.t1
chr6.3 exon 6077919 6078179 6077919 ID=MS.gene20471.t1.exon3;Parent=MS.gene20471.t1
chr6.3 CDS 6077919 6078179 6077919 ID=cds.MS.gene20471.t1;Parent=MS.gene20471.t1
chr6.3 exon 6078609 6079916 6078609 ID=MS.gene20471.t1.exon4;Parent=MS.gene20471.t1
chr6.3 CDS 6078609 6079916 6078609 ID=cds.MS.gene20471.t1;Parent=MS.gene20471.t1
chr6.3 exon 6080018 6080560 6080018 ID=MS.gene20471.t1.exon5;Parent=MS.gene20471.t1
chr6.3 CDS 6080018 6080560 6080018 ID=cds.MS.gene20471.t1;Parent=MS.gene20471.t1
chr6.3 exon 6081191 6081235 6081191 ID=MS.gene20471.t1.exon6;Parent=MS.gene20471.t1
chr6.3 CDS 6081191 6081235 6081191 ID=cds.MS.gene20471.t1;Parent=MS.gene20471.t1
Gene Sequence

>MS.gene20471

ATGAGCAATGAGATTGTTCAAAAGCCTCCACCATCAATCCTCGTTGGTCGATTCAAGGCTTTGTTGAATCAACGTCGTGAAGAAGATCCTAGGTTGAGAAATTCGCAACCTTCAACGGAAGAAATTGTTCAGATTTACGAGCTTTTGTTGTCTGAACTCACGTGTAATGTTAAACCTATCATCACTGATCTTACTATCATTGCTGAACAACATCGTAATCATGCTAAAGGAATCGCTTTTGCTATTTGCAACCGTATTGTTGAGGTTTTTGTTTTTTACACCCCCTTTTGTAAAATTCCACACCATTGTTCAGATTAAGAGTTATTATTGTTGTTTTCATTGTTGTGAATTCAATTCTTGTCTATTTTATTGTTCTATTTGTTTTTTACTTTATCAATTTAGTTTATTGCTATTCGATAGGAAATTTTTTCGATTTTTAGTTCATTTCATTTGATGGGTTTCACAGTTTTGGCGATTTTTTTTTTAATTTAATTGATTAATAATTGTTTATTTGGGAATTGGAAATTGAAAGTAATGATTTTGATGTAATTGTGATTGTGTTAAACCAATTAGTAGCATCTGGGCAATTGAAATATAACTACAACTAATAATGAATGATGTTGTCAAATACCGGGTAGCGGAATTTGAACAAATTACTATCGTTTTGCGATTAGCTTTTTAGTTAAAGTGTTATCAAATAACAGCACTAACCCTATAGCAGCACTGTAGCATAGCGGAATATGAATAAACCACTATTTTCTGCGATTTGTGATTGATAACATTGTTAACAAATGGTAAAATTTAGGGATTCAAGTAAGTATACTTAACCAATAACACAATTGAGTACTTAAAAATCGATTTTTGGAACCAATGAAAGTGAAATAGTTAGTTTATCAATGGTGGATTATAGAAGCCAGGGCACATAATTTCGTGTAATAATAATGGGGTTTACGGCCTATGGTGGATATAATAGGAATTAGGAATTCAGGACGATGATGGCTTGCACAACCATGTTGTACTGCCATAGTGGCAATTTGACAACACTGAAAATACTATAATATCTGGAGTAATTTTTAAAGGATTTAGACAAACATTTCATCTGAAAAGGGAATTCGTTATTGTGCTTTTGCTGAAATGATTAAGTATTTTGGCAACTTGCTCAAGTTGGAATACAGTATTCCAAATCCTCACAGCTTTTCATCGGAGTTTTTGTGCGTGTGTGAATGCTACCTGGGTTTTAGGTTGCTTGTAGTTGAAATAAACGAGAATGAACAAGGCTGCAATTGAATGCTAAACAATTTCCTGAATAAATTGAATGATTTTGAAACATTAGCGTATACTTGCTTGGAGTAAATATTAGGTTAAGTATATTAGTCTTGCATCACACATATTAGACTATTGATAATCCAGCTTACTTCATATATATTTCATGCCTATGTTAATATGTTATTTTGTAGCTATATTTTTGTTGTTATTGTTTAGACAAGCTGTTAACTAAGGTTGTGTATTTATAATAGCTTATGCTAGAAGATAATTGGGTTGTTGGTGTCATCTAACTGACAGTCAGCTCAATTTGATAGAATTCTATCTATCATATATCTTTATTCTCTGTATATTCATTTCATCACTTTTGCATTTCAGAATAACCTAATGTATCCATACCAGTTTTGCGTTCTCTCCCAAGCCTCATCACCACCTATCATTTTCTATAAATATCTATACTGCCAATTTTCGTTTCTTATACTACGTAACACACACTTTTAACATTTACATACAAAGTAACTAGTACATAGTTTGCTGTATCTTTGTCAACATTGGCGATCTCAGAGGCAGAATAATATAAAATTGTTTAATTATGATACTGATGCCTCTTCTTATTAAGTTTATATGGGCATAGTTTGCTCGTACCAATGAGAAATAAGTTTGATTCTTTGTTGGAAAAATCATACAGGGATTCTTACAGAAGTATTGGTTCTTAACCTAACCCCATATCAATTTTGATTTTAGAGATTAATTGTCACCAATCTCTCCTCTGAAATGGGAACTTTGTAAGAATTGGTTAAAGAATTCGGTAAATAACTGTGCAGTAAATCATTTTATCGTTGTCCAAAACACATAACTCATCATGCAAAATGTTGTCACTGACACGCCACTAAGTTTAGTGTGGAAACTGTAGAGTGATTCCTTTTTCTTTTCTATTTTTTCTTTTACTATCTAGTTAATAGTGTGTAGTATAAAATCAACGTCTCTATTATTATTCGAATCTCCGCTATTTGTATGGTCTCCAATTGTTTATTATTTTTCAGGTGTCTGCAGATCAAAAGCTACCTTCACTCTATCTCTTGGACAGTATTGTGAAGAATGTTGGCCAGGAATATGTTCGATACTTCTCACCGCGTCTACCCGAAGTAGGTTATTGTAATTTGATTGAATTCCTAAATGATTTAATTCTGTTATTGAAACTTATAGTTCTATTGTCTGCCTAGGTTTTCTGCGTGGCATACAGACAAGTTGATCCAAGTTTACATTCTGCTATGCGACATCTCTTTGGTACCTGGTCAAAAGTCTTCCCTCCTTCTGTCTTACGGAAGATTGACGTGGAATTGCAATTTTCTAAACCAGTTAATAATCAACCATCAGGCGTTAATTCCCTTAGGGCTTCTGAATCTCCTCGACCTACTCATGGGATACATGTTAACCCAAGATACGTAAGACAAATAGAACACTCTACTTCAGTTATTGATAGTGTAAGTTTTTTTTCCCTTCAAATCTGCACTCCTTACAAAATATTTTGGATGGAACTGCATCTCATTTAGTTGCGGATTTAATAAGGATGTGTTTGGCATCAATAATTTACATATATTCAGAAAAAAAAAAAAAAGAAACTGATTGCATGTAACCAGAACCCAATGTGATTTTTGTGGAAAATATCTTAATTTTGCGCAGATGAGATTTTTTTTTCTTCTAGAATCTTATGTCTTAAAATATTTTAATTTCTGTTGAGGCAGTGAGTCTTAGATGACATATTATATACTTCTATTTCCTTGTATTCAGTAAGGACTTTGTTCTACGTGAAACTGGATTATGTTGTATCTGTTAGTTCCCTCTAGCAACAGAGAACTCTTGCATACTACTATAAGATGTATTCTGACAGTGTGTTGGTTTCATCCTCACAGGTTGCAGGTGAAAGGTTAGACTCAACAGGAACTGTTGGAAATGCAAATTTCGGTCTTCTTGCTAGTAAGATTAATCAATTTGTCCCAAGTAGGGTTGGAAGATCTTCGTCACCACCAAGAATTGGACTTGATAGGCATATGCCCTCATATATGGATGAATATTTAGCTGACAATTCCACTGGTAGGACAGTTGAGAGAGAATCTCCCCATCATGCTGTTGATTATGGCCTAGTTAAAGGATTAGGTAGAGAAGAAGAGTTGAGTGAGTGGTCGCGAAAGCCGTTTTCTGGTGATAGTCGGAAGAGATTTCAAACTTCTATGACATATAGCCTTAGTAACGGACAACCACGTCAAAATCCAAGAGCACTAATTGATGCCTATGGTAGTGACAAAAGCCAAGAAACTTCTGGCAGTAAGCCTTTGTTAGTTGAGCGGCTGGATAGAAATGGTATGGATAAGGTTATGACAACATCATGGCAGAATACTGAAGAAGAGGAGTTCGATTGGGAAGATATGAGTCCGACAGTAGTAGACCATGGTAGAAGTAATGGTTTCCTGCAACCAACTATTGGTTTCTCATCAGAAAAGCCTGCTACTGTTGCAGCCAATGCAACTTCTTCAGTGTCAAGGGTGTTTCCTGGTCTCAATTCAAATATTGAGTACCGTCCAACAGTTTTGCCTGCAGCTTTTGAAATGAGGCATTCCGTAAATGTGCATGCTCCACGTCCTCCCAGCATAACTCCTATATTTCCATCGAAGAATCCTGTTAGGAATCCATTCGAATCAATAAATGCCAATAGTACCATTGTGAGTCATGGTCTAATCAATAGACCTTTTCCTGTGCATGAACAACCGCAGCACGGTGTTGAGAACAATGATATCAATAAAAGAAACCTGTATCAGCTACCTAATCAGCTTCCTGGTCTGATTTCATCTAACCCGCCAAACAGTGTACAAACACCGTCATTCCAGTTTTTTCCACCTCAGGATCCAGCATCGTCACAATTTACTTATAGGCCATCTTTGCCAGGACATGGTCATGCTATGAGTAACCCCCTGCCAAATGTACGACCTGTTATGCCACTCCCTTTGCCAGGCCAAAGAATCGGAAACAACTCTTTTCATTTCCAGGGAGGAGCTTTGCGACCTTTACCTCCACCTGGCCTACACGCTCCATCCCAGATGCCACCTCATCCCAATCCTAGTCCATTTGTACCAAGCCAACAGCCAACTGTTGGATATTCTAATTTGATTAATTCACTTATGGCCCAAGGTGTAATCTCATTGGCTAATCAAGCCCCTTCACAGGTAACTAAATCTACCCTAAGTTTTTTTTTTTTTAAATTCCCATTTTCCTTCCATTTTTGACTTGCTTGCGAACCAACTTTGTAATTATATTATATTTGTAGGATTTTGTTGGCATTGAGTTTGATCCAGACACTCTGAAGGTTCGTCATGAATCTGCAATCAGTGCCTTATACGGTAATCTTCCTAGACAGTGCACAACTTGTGGCCTCCGATTCAAATCCCAAGACGAGCACAGCAGTCACATGGATTGGCATGTGACTAAGAACCGTATGTCTAAAAACCGTAAGCAGAAGCCCTCTCGTAAATGGTTTGTGAGTGAGACGATGTGGCTTAGTGGTGCAGAGGCATTGGGAGCCGAATCAGCTCCAGGTTTTTTGCCAACCGAGACCACTGAGGAAAAGAAAGAAGATGAAGAGTTGGCTGTTCCGGCCGACGAGGACCAAAATACATGTGCATTATGTGGAGAACCTTTTGAGGAGTTTTACAGTGATGAAACGGAGGAGTGGATGTATAGAGGAGCTGTATACCTTAATGCGCCTAATGGAATAACAACAGGCATAGACAGGTCGCAGTTAGGCCCCATTATTCATGCTAAATGCAGATCTGAATCTACCCCGTCTGAAGATTTTGTGATGGACGAAGGGGTATGTGTTTCTCATATTACTTATCTATGCATTTGTATTGTTTTTGTTCTACTTTAAGTGTTTAACTCATTGACCAGCATTGAACTAGATTTCTTCGCAACTATATGTTTTTACTTATGTCTTTAACTCATTGACAAACATTGAACTAACTTACTTTGCAACTATATGTTTTTACTTAAGTCTTTGATTCATTGACCAGCATTGAACTAGATTTATTCGCAACTTTATTTTTTTTACTTTCCCAATGGTAAAACTTGTTTTTGGGGGAGAGATCCAGAATTCGGCAGTCATATTATTCTTTTGGTGATTTCTCTTCAAGTGAGAATCAACCAATTATATCGTAAATTGCACATTTTGGCTGAAATGCAAATGCAGTGTCTTGTTTTTTTTCCGCCGCCTTCTATGTCATGTTTTGCAAATGTGGATATCATGGTTCACAATAGATTGCAACACTAGGCGTGGTAATTTATGCTCGAACAACACATATCAATGTTAAAAAATTGCAAATACGCGTGCCTATTTAATCGCTGCTAACTTCACATGATGTTATTATTTCAAGTGGACTTTTGCTTGTGCTGATGATCTTCAAGCAGCACATATTTATTCTTTTGTTTCCCTCTTTGTATGCAGGGCACCTATGACGAAGGCAGTCAAAGAAAACGAATGCGGAGCTGA
Protein sequence

>MS.gene20471.t1

MSNEIVQKPPPSILVGRFKALLNQRREEDPRLRNSQPSTEEIVQIYELLLSELTCNVKPIITDLTIIAEQHRNHAKGIAFAICNRIVEVSADQKLPSLYLLDSIVKNVGQEYVRYFSPRLPEVFCVAYRQVDPSLHSAMRHLFGTWSKVFPPSVLRKIDVELQFSKPVNNQPSGVNSLRASESPRPTHGIHVNPRYVRQIEHSTSVIDSVAGERLDSTGTVGNANFGLLASKINQFVPSRVGRSSSPPRIGLDRHMPSYMDEYLADNSTGRTVERESPHHAVDYGLVKGLGREEELSEWSRKPFSGDSRKRFQTSMTYSLSNGQPRQNPRALIDAYGSDKSQETSGSKPLLVERLDRNGMDKVMTTSWQNTEEEEFDWEDMSPTVVDHGRSNGFLQPTIGFSSEKPATVAANATSSVSRVFPGLNSNIEYRPTVLPAAFEMRHSVNVHAPRPPSITPIFPSKNPVRNPFESINANSTIVSHGLINRPFPVHEQPQHGVENNDINKRNLYQLPNQLPGLISSNPPNSVQTPSFQFFPPQDPASSQFTYRPSLPGHGHAMSNPLPNVRPVMPLPLPGQRIGNNSFHFQGGALRPLPPPGLHAPSQMPPHPNPSPFVPSQQPTVGYSNLINSLMAQGVISLANQAPSQDFVGIEFDPDTLKVRHESAISALYGNLPRQCTTCGLRFKSQDEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSETMWLSGAEALGAESAPGFLPTETTEEKKEDEELAVPADEDQNTCALCGEPFEEFYSDETEEWMYRGAVYLNAPNGITTGIDRSQLGPIIHAKCRSESTPSEDFVMDEGGTYDEGSQRKRMRS