AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20574

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20574.t1 MTR_6g008970 97.765 1387 24 3 1 1380 1 1387 0.0 2793
MS.gene20574.t1 MTR_5g036670 51.233 1460 576 35 1 1377 1 1407 0.0 1281
MS.gene20574.t1 MTR_8g062700 50.000 1470 576 33 1 1377 1 1404 0.0 1273
MS.gene20574.t1 MTR_8g062700 50.000 1470 575 34 1 1377 1 1403 0.0 1269
MS.gene20574.t1 MTR_6g008995 67.654 439 84 7 49 480 27 414 0.0 561
MS.gene20574.t1 MTR_6g008995 66.912 408 77 7 80 480 1 357 6.88e-171 516
MS.gene20574.t1 MTR_8g069945 48.209 363 158 11 847 1193 66 414 1.05e-81 275
MS.gene20574.t1 MTR_7g013410 46.939 147 69 2 63 207 2 141 5.02e-39 142
MS.gene20574.t1 MTR_8g062350 41.000 200 76 4 50 207 2 201 2.53e-35 134
MS.gene20574.t1 MTR_1g105955 43.421 152 79 1 56 207 13 157 6.07e-29 115
MS.gene20574.t1 MTR_1g105955 53.623 69 32 0 59 127 95 163 2.21e-15 76.3
MS.gene20574.t1 MTR_1g105960 64.000 75 27 0 60 134 2 76 1.95e-25 102
MS.gene20574.t1 MTR_3g006150 40.506 158 85 4 53 207 2 153 1.60e-22 95.9
MS.gene20574.t1 MTR_3g006150 58.974 78 31 1 52 128 83 160 1.91e-19 87.4
MS.gene20574.t1 MTR_4g133300 40.000 160 86 3 49 208 3 152 3.70e-22 97.8
MS.gene20574.t1 MTR_4g133300 34.810 158 100 1 51 208 81 235 9.57e-19 87.8
MS.gene20574.t1 MTR_4g133300 53.247 77 34 1 52 128 167 241 1.74e-15 78.2
MS.gene20574.t1 MTR_1g104960 34.211 152 100 0 57 208 11 162 1.77e-21 93.6
MS.gene20574.t1 MTR_1g104960 44.595 74 41 0 60 133 100 173 1.58e-13 70.9
MS.gene20574.t1 MTR_3g006125 40.373 161 90 3 53 207 83 243 2.26e-21 95.9
MS.gene20574.t1 MTR_3g006125 58.108 74 30 1 55 127 176 249 1.70e-19 90.1
MS.gene20574.t1 MTR_3g006105 38.750 160 92 3 53 206 2 161 3.43e-21 93.2
MS.gene20574.t1 MTR_3g006105 52.703 74 34 1 55 127 95 168 7.82e-15 74.7
MS.gene20574.t1 MTR_4g133470 39.073 151 83 2 58 208 11 152 8.93e-21 94.0
MS.gene20574.t1 MTR_4g133470 34.177 158 101 1 51 208 81 235 3.65e-17 83.2
MS.gene20574.t1 MTR_4g133470 53.247 77 34 1 52 128 167 241 1.60e-15 78.6
MS.gene20574.t1 MTR_3g006065 39.241 158 87 4 53 207 2 153 1.32e-20 91.7
MS.gene20574.t1 MTR_3g006065 58.974 78 31 1 52 128 83 160 1.24e-19 88.6
MS.gene20574.t1 MTR_1g104940 55.263 76 34 0 59 134 14 89 4.30e-20 87.8
MS.gene20574.t1 MTR_3g006185 38.125 160 94 3 53 207 2 161 1.06e-18 85.5
MS.gene20574.t1 MTR_3g006185 51.351 74 35 1 55 127 94 167 9.95e-16 77.0
MS.gene20574.t1 MTR_5g036790 51.429 70 34 0 138 207 13 82 6.35e-17 77.4
MS.gene20574.t1 MTR_1g105010 40.000 95 52 1 48 137 5 99 4.49e-16 76.3
MS.gene20574.t1 MTR_8g469180 42.553 94 54 0 336 429 192 285 4.87e-16 80.9
MS.gene20574.t1 MTR_8g469180 45.349 86 47 0 332 417 107 192 1.48e-15 79.3
MS.gene20574.t1 MTR_5g055670 80.488 41 8 0 92 132 89 129 2.53e-15 74.7
MS.gene20574.t1 MTR_1g023820 36.943 157 39 6 89 245 17 113 2.61e-15 74.3
MS.gene20574.t1 MTR_1g104937 46.154 78 42 0 57 134 10 87 3.07e-15 73.6
MS.gene20574.t1 MTR_7g013380 31.818 154 99 3 59 208 99 250 4.76e-15 78.2
MS.gene20574.t1 MTR_7g013380 31.336 217 131 8 60 266 14 222 9.79e-15 77.0
MS.gene20574.t1 MTR_7g013380 29.586 169 59 3 59 225 185 295 1.81e-11 67.4
MS.gene20574.t1 MTR_5g033370 51.807 83 38 2 1189 1270 121 202 5.60e-15 76.6
MS.gene20574.t1 MTR_1g109550 35.833 120 67 2 56 175 13 122 9.44e-15 73.2
MS.gene20574.t1 MTR_2g097830 40.187 107 55 2 58 164 69 166 9.62e-15 73.9
MS.gene20574.t1 MTR_1g093310 50.649 77 30 2 54 128 2 72 6.71e-14 68.6
MS.gene20574.t1 MTR_7g089490 45.679 81 43 1 47 127 5 84 8.29e-13 67.0
MS.gene20574.t1 MTR_1g104980 30.872 149 88 1 61 209 1 134 2.01e-12 67.4
MS.gene20574.t1 MTR_1g091047 44.776 67 36 1 58 123 8 74 2.21e-11 61.2
MS.gene20574.t1 MTR_5g036820 41.667 72 40 1 138 207 13 84 7.75e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20574.t1 AT5G15020 57.507 1412 509 26 1 1379 1 1354 0.0 1484
MS.gene20574.t1 AT5G15020 57.022 1424 509 27 1 1379 1 1366 0.0 1476
MS.gene20574.t1 AT3G01320 56.608 1415 534 33 1 1378 1 1372 0.0 1435
MS.gene20574.t1 AT3G01320 56.414 1411 531 33 1 1378 1 1360 0.0 1422
MS.gene20574.t1 AT1G70060 48.098 1393 589 34 48 1377 3 1324 0.0 1146
MS.gene20574.t1 AT1G70060 48.098 1393 589 34 48 1377 3 1324 0.0 1146
MS.gene20574.t1 AT1G24190 49.194 1364 575 39 45 1352 3 1304 0.0 1142
MS.gene20574.t1 AT1G24190 49.194 1364 575 39 45 1352 3 1304 0.0 1140
MS.gene20574.t1 AT1G24190 48.977 1368 576 40 45 1352 3 1308 0.0 1133
MS.gene20574.t1 AT1G59890 51.648 455 187 7 405 829 249 700 4.25e-133 440
MS.gene20574.t1 AT1G59890 45.648 471 203 12 938 1377 717 1165 1.24e-105 363
MS.gene20574.t1 AT1G59890 51.103 272 109 7 1 270 1 250 6.66e-62 232
MS.gene20574.t1 AT1G59890 43.471 582 243 10 330 829 118 695 1.57e-131 435
MS.gene20574.t1 AT1G59890 47.126 435 188 10 938 1352 712 1124 9.05e-104 358
MS.gene20574.t1 AT1G59890 51.103 272 109 7 1 270 1 250 6.72e-62 232
MS.gene20574.t1 AT1G59890 43.471 582 243 10 330 829 118 695 3.25e-131 435
MS.gene20574.t1 AT1G59890 45.648 471 203 12 938 1377 712 1160 1.73e-105 363
MS.gene20574.t1 AT1G59890 51.103 272 109 7 1 270 1 250 7.49e-62 232
MS.gene20574.t1 AT1G59890 43.127 582 241 11 330 829 118 691 9.95e-128 425
MS.gene20574.t1 AT1G59890 45.648 471 203 12 938 1377 708 1156 1.40e-105 363
MS.gene20574.t1 AT1G59890 51.103 272 109 7 1 270 1 250 6.28e-62 232
MS.gene20574.t1 AT1G10450 47.033 455 219 8 434 869 264 715 1.37e-120 404
MS.gene20574.t1 AT1G10450 44.266 436 222 8 938 1368 689 1108 3.42e-97 338
MS.gene20574.t1 AT1G10450 44.966 298 121 8 1 297 1 256 4.85e-58 220
MS.gene20574.t1 AT1G10450 47.033 455 219 8 434 869 264 715 1.37e-120 404
MS.gene20574.t1 AT1G10450 44.266 436 222 8 938 1368 689 1108 3.42e-97 338
MS.gene20574.t1 AT1G10450 44.966 298 121 8 1 297 1 256 4.85e-58 220
MS.gene20574.t1 AT1G10450 47.033 455 219 8 434 869 315 766 5.65e-120 404
MS.gene20574.t1 AT1G10450 44.266 436 222 8 938 1368 740 1159 6.15e-97 338
MS.gene20574.t1 AT1G10450 44.966 298 121 8 1 297 52 307 7.11e-58 219
MS.gene20574.t1 AT1G24200 60.123 163 59 2 45 207 3 159 2.30e-53 186
MS.gene20574.t1 AT1G70030 53.846 156 70 2 52 207 4 157 7.81e-47 165
MS.gene20574.t1 AT5G15025 55.970 134 46 2 1 133 1 122 2.09e-38 140
MS.gene20574.t1 AT1G70030 44.231 156 53 2 52 207 15 136 2.02e-30 117
MS.gene20574.t1 AT5G35610 42.953 149 70 3 51 188 2 146 1.99e-28 112
MS.gene20574.t1 AT1G70030 53.704 108 49 1 52 159 15 121 2.44e-28 111
MS.gene20574.t1 AT1G24230 39.735 151 86 3 54 203 81 227 5.91e-27 111
MS.gene20574.t1 AT1G24230 31.361 169 98 4 48 213 3 156 1.09e-16 81.6
MS.gene20574.t1 AT1G10250 70.000 70 20 1 1145 1213 1 70 1.51e-23 95.9
MS.gene20574.t1 AT1G24250 37.342 158 75 2 56 212 117 251 3.70e-23 100
MS.gene20574.t1 AT1G23810 35.032 157 78 2 56 211 106 239 5.19e-22 97.1
MS.gene20574.t1 AT1G27280 35.616 146 93 1 47 191 69 214 5.25e-22 96.7
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 8.67e-22 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.29e-22 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.29e-22 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.64e-22 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.64e-22 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 9.68e-22 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 1.03e-21 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 1.04e-21 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 1.05e-21 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 295 381 1.06e-21 103
MS.gene20574.t1 AT4G12020 55.914 93 35 2 41 133 228 314 1.08e-21 103
MS.gene20574.t1 AT5G15040 54.054 74 34 0 62 135 6 79 5.24e-20 86.3
MS.gene20574.t1 AT5G15040 54.054 74 34 0 62 135 6 79 5.24e-20 86.3
MS.gene20574.t1 AT5G15040 54.054 74 34 0 62 135 6 79 5.24e-20 86.3
MS.gene20574.t1 AT1G24210 32.544 169 92 3 48 215 3 150 1.32e-19 87.4
MS.gene20574.t1 AT1G27260 32.500 160 84 2 48 206 82 218 9.84e-18 84.3
MS.gene20574.t1 AT1G27260 30.128 156 101 2 57 206 1 154 9.57e-17 81.3
MS.gene20574.t1 AT1G27240 33.721 172 93 4 56 206 11 182 1.38e-17 82.8
MS.gene20574.t1 AT1G27220 48.750 80 41 0 47 126 2 81 1.02e-16 80.1
MS.gene20574.t1 AT1G27250 45.349 86 43 1 45 126 3 88 1.33e-15 75.5
MS.gene20574.t1 AT1G27270 33.766 154 78 3 56 208 110 240 8.93e-12 67.4

Find 286 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATGATTTACAAAATT+TGG 0.100558 6.3:-4719931 MS.gene20574:intron
TGTAAACATGTTCATCATTT+TGG 0.116960 6.3:+4721448 None:intergenic
AATCTCCATGCGACTTAAAA+AGG 0.189205 6.3:+4721241 None:intergenic
CTCAGAAACAAACCGAAATA+TGG 0.194221 6.3:-4714903 MS.gene20574:intron
ACTTCATTCTTGTCAGATTT+TGG 0.196682 6.3:+4717319 None:intergenic
TAGTAGAGATGATCATTTAA+TGG 0.245705 6.3:-4717206 MS.gene20574:CDS
GTTCAGATTTCAATAAAGTT+TGG 0.277896 6.3:-4717925 MS.gene20574:CDS
GAAGATGTCAAAGTAGTTAA+TGG 0.280275 6.3:-4714843 MS.gene20574:CDS
CTTGAATTGGACTCTCTGTT+AGG 0.291590 6.3:+4717346 None:intergenic
GGAGTTAACGGAGGAGGAGG+TGG 0.295858 6.3:-4722001 MS.gene20574:CDS
TGCAGTCTTCTAGTCCTTCT+CGG 0.296651 6.3:-4715226 MS.gene20574:intron
ATCTTCAAACTTGGCATTCT+CGG 0.300196 6.3:+4715669 None:intergenic
CCTCAATGAGCGGGGTTCTA+TGG 0.314080 6.3:-4721130 MS.gene20574:CDS
GTCTGTCCTCCCTGGCAAAA+AGG 0.316087 6.3:-4715105 MS.gene20574:CDS
TTTATGCAGTTCTAAATCTA+AGG 0.316087 6.3:-4718075 MS.gene20574:intron
GAGGCTCTGGAGTACCTTCT+TGG 0.321223 6.3:-4717482 MS.gene20574:CDS
GATCATTTAATGGATAATAA+AGG 0.322545 6.3:-4717196 MS.gene20574:CDS
GGAAGTGAAAGACATGTTTC+AGG 0.324751 6.3:-4721924 MS.gene20574:CDS
TTAGAGCGTTGTGAAAATAT+TGG 0.331915 6.3:-4719150 MS.gene20574:intron
GTCTTTCACTTCCTTCAAAT+AGG 0.332619 6.3:+4721934 None:intergenic
TCTGCATCTGTCACAATTAG+AGG 0.333684 6.3:-4717094 MS.gene20574:CDS
TTCAATCGAGTCAATATTAC+AGG 0.334568 6.3:+4717977 None:intergenic
GATGAATGTCGAGCAATTCT+TGG 0.338703 6.3:-4715649 MS.gene20574:CDS
TCATCTAAGTCCCCATATTT+CGG 0.343556 6.3:+4714891 None:intergenic
TTCAGATTTCAATAAAGTTT+GGG 0.344404 6.3:-4717924 MS.gene20574:CDS
CCCGGAGGTGGTGGTGGCGG+AGG 0.347061 6.3:-4722025 MS.gene20574:CDS
GGAGGTGGTGGTGGCGGAGG+TGG 0.354735 6.3:-4722022 MS.gene20574:CDS
ACCTCCGCCACCACCACCTC+CGG 0.358286 6.3:+4722024 None:intergenic
CTTCCTCCTCATGATCTTCC+CGG 0.362474 6.3:+4716273 None:intergenic
ATGATTTCTTTGTTCTCTTT+AGG 0.364298 6.3:-4716043 MS.gene20574:CDS
AGGAAATACGAGTCTAGAAA+TGG 0.366851 6.3:-4716422 MS.gene20574:CDS
CAAATAGGATAAAGCATCAT+TGG 0.368007 6.3:+4721949 None:intergenic
AGATCATGAGGAGGAAGATA+TGG 0.369226 6.3:-4716267 MS.gene20574:CDS
ACGCCATTGGCCACTGGTAC+TGG 0.371625 6.3:+4716605 None:intergenic
CGCTGACTAGCAGTAGGAAT+TGG 0.371739 6.3:+4718584 None:intergenic
TTTGCAGACGGGTTCCTTGC+TGG 0.381199 6.3:-4719043 MS.gene20574:intron
GGCCCCGGAGGTGGTGGTGG+CGG 0.384587 6.3:-4722028 MS.gene20574:CDS
AGGTGCATTGAACGCCTATA+TGG 0.395051 6.3:-4718055 MS.gene20574:CDS
TAAGGCACTTCAAGAATGTT+TGG 0.396241 6.3:+4719979 None:intergenic
AGTTAACGGAGGAGGAGGTG+GGG 0.396605 6.3:-4721999 MS.gene20574:CDS
CCTCCTCAGAGTCAGCATTC+GGG 0.401332 6.3:+4716501 None:intergenic
CAAGGCCCCGGAGGTGGTGG+TGG 0.408020 6.3:-4722031 MS.gene20574:CDS
CACTGGGTATCTGTGACTTC+CGG 0.410808 6.3:-4718530 MS.gene20574:CDS
CAACAAGCGCTGAAATGAAA+TGG 0.414086 6.3:-4715888 MS.gene20574:CDS
TCCTCCTCAGAGTCAGCATT+CGG 0.414742 6.3:+4716500 None:intergenic
CATCAAGTACATCAGCTTCT+CGG 0.416660 6.3:-4714021 MS.gene20574:CDS
TCAGAAACAAACCGAAATAT+GGG 0.416743 6.3:-4714902 MS.gene20574:intron
AGAAACAAGAGGAGTGGAAT+AGG 0.416915 6.3:-4717952 MS.gene20574:CDS
GGTCAAGGCCCCGGAGGTGG+TGG 0.417779 6.3:-4722034 MS.gene20574:CDS
TTGAATTGGACTCTCTGTTA+GGG 0.418625 6.3:+4717347 None:intergenic
TCAATAAAATTATGAGGCTC+TGG 0.422837 6.3:-4717495 MS.gene20574:CDS
CAAACCACAATGACGATAGA+AGG 0.422917 6.3:-4716442 MS.gene20574:CDS
GACGAGCACCGTCCAGAGGC+TGG 0.424663 6.3:-4716395 MS.gene20574:CDS
AGCGTGAGAGCAGGGATAGA+AGG 0.425696 6.3:-4720886 MS.gene20574:CDS
AGCAGAGGAAGCGTGAGAGC+AGG 0.426237 6.3:-4720895 MS.gene20574:CDS
TACTTGCATTTGCCGCATCC+CGG 0.427003 6.3:+4721104 None:intergenic
TTGGCCACTGGTACTGGAGG+TGG 0.427920 6.3:+4716611 None:intergenic
AGAATTATCTGGTAAGAATC+TGG 0.428698 6.3:+4721203 None:intergenic
GATAAAGAAAACGGTTCTCT+TGG 0.429366 6.3:-4717241 MS.gene20574:CDS
TCCACACAGCATGCTCCATT+TGG 0.429499 6.3:-4721171 MS.gene20574:CDS
TATTGAATAACTCTTTACTT+TGG 0.429894 6.3:+4717512 None:intergenic
TTCTGCAATTTGTGCTGTAA+TGG 0.430468 6.3:-4714865 MS.gene20574:CDS
TGATGCTTTATCCTATTTGA+AGG 0.431866 6.3:-4721945 MS.gene20574:CDS
CATTCATATTGTCCATGAGC+TGG 0.432194 6.3:+4715195 None:intergenic
GAGAACTGTTTAACAAATCC+AGG 0.434098 6.3:+4717142 None:intergenic
CTCTGCTTCACCTTCACTCT+CGG 0.434724 6.3:+4716220 None:intergenic
GGTGGCGGAGGTGGAGTTAA+CGG 0.438397 6.3:-4722013 MS.gene20574:CDS
ATCATTTAATGGATAATAAA+GGG 0.439339 6.3:-4717195 MS.gene20574:CDS
TCGACATTCATCTTCAAACT+TGG 0.440486 6.3:+4715660 None:intergenic
TATGAAAAGTCTCGGAAACC+TGG 0.442004 6.3:-4715428 MS.gene20574:CDS
CAGTTTCTGCGATAAAGTTA+AGG 0.442484 6.3:-4720027 MS.gene20574:CDS
GTTCTATGGCACCCGGGATG+CGG 0.444112 6.3:-4721116 MS.gene20574:CDS
GAGTTAACGGAGGAGGAGGT+GGG 0.447308 6.3:-4722000 MS.gene20574:CDS
TCCGAGTGCTAATGTACCTT+TGG 0.447911 6.3:-4716843 MS.gene20574:CDS
CACGATCATGAGAAGAAAAT+CGG 0.448821 6.3:+4720978 None:intergenic
GAGTGTTGAACGTCCTGATC+TGG 0.449508 6.3:-4720951 MS.gene20574:CDS
TCTGACAAGAATGAAGTTGA+TGG 0.449745 6.3:-4717313 MS.gene20574:CDS
TCATTATCACCTCCAGCCTC+TGG 0.449905 6.3:+4716383 None:intergenic
GCTAAGGTCAAGTTCTTGAA+TGG 0.450350 6.3:+4718747 None:intergenic
GAAAGAGTAATCCTCGCTTC+CGG 0.451243 6.3:+4718511 None:intergenic
TGAGGTCATGAAAGATTTCA+AGG 0.452200 6.3:-4721873 MS.gene20574:CDS
GAGGATAACTTTGTTGCCTA+TGG 0.453692 6.3:-4716482 MS.gene20574:CDS
TGCATTGAATTTCGACCAAA+TGG 0.453988 6.3:+4721156 None:intergenic
CGCAAGTACTGAATGATCAC+TGG 0.457151 6.3:-4718547 MS.gene20574:CDS
GTTAACGGAGGAGGAGGTGG+GGG 0.458649 6.3:-4721998 MS.gene20574:CDS
CAAGACCATGGTCACCATAT+AGG 0.459075 6.3:+4718041 None:intergenic
CCTTTCCGACTCATGCGATT+GGG 0.460266 6.3:+4717438 None:intergenic
CCCTTTCCGACTCATGCGAT+TGG 0.461152 6.3:+4717437 None:intergenic
AGCGAAAATGTTTCTGAAGC+TGG 0.461684 6.3:-4716338 MS.gene20574:CDS
CCTCCGCCACCACCACCTCC+GGG 0.462154 6.3:+4722025 None:intergenic
ACTGAATCATTTAATTTCCC+AGG 0.462924 6.3:+4715410 None:intergenic
GAAGGTGCTGAAGAATTATC+TGG 0.464158 6.3:+4721192 None:intergenic
GGAAAGATTCCGCAAATTGA+TGG 0.464870 6.3:-4713981 MS.gene20574:CDS
AGTTATTCAATAAAATTATG+AGG 0.465617 6.3:-4717501 MS.gene20574:CDS
CATCAGCTTCTCGGTCTCGC+AGG 0.469915 6.3:-4714012 MS.gene20574:CDS
TGTGATGCTGATGCACAAAC+TGG 0.470759 6.3:-4716191 MS.gene20574:CDS
AACAGCAACAGCAGCAATCT+CGG 0.471061 6.3:+4715166 None:intergenic
GATGCACAAACTGGAGTAGA+TGG 0.473082 6.3:-4716182 MS.gene20574:CDS
AACATGATCTTGATAACAGC+AGG 0.473114 6.3:-4720841 MS.gene20574:CDS
AGTGTTATCTCATATCCCTT+TGG 0.473567 6.3:+4721653 None:intergenic
TTTCTGATGTAGGTTTGAGC+TGG 0.475066 6.3:-4718317 MS.gene20574:intron
CGAAGCTCCTCCGAAGAAAA+CGG 0.475667 6.3:-4721615 MS.gene20574:CDS
GGAAATACGAGTCTAGAAAT+GGG 0.477628 6.3:-4716421 MS.gene20574:CDS
ACCTTCTTGGAACCGATGCT+TGG 0.481962 6.3:-4717469 MS.gene20574:CDS
GAGTGCTAATGTACCTTTGG+TGG 0.483221 6.3:-4716840 MS.gene20574:CDS
GACATCAGCATCAGTAGGTC+GGG 0.485289 6.3:+4716892 None:intergenic
AATGCAGCGCCTCAATGAGC+GGG 0.486636 6.3:-4721139 MS.gene20574:CDS
CTTGCCAGATTCTTTATGAA+AGG 0.488681 6.3:-4715933 MS.gene20574:intron
ATGTTCTCTGTCCTCCAACT+TGG 0.490073 6.3:+4718831 None:intergenic
TGGTGTCATAGCAAGGGTTA+AGG 0.492194 6.3:-4721726 MS.gene20574:CDS
TGTCAAAGTAGTTAATGGAT+TGG 0.492576 6.3:-4714838 MS.gene20574:CDS
TTCATTTGTTGAAGATGTGA+AGG 0.494932 6.3:-4716090 MS.gene20574:CDS
TTATCTCATATCCCTTTGGC+AGG 0.495574 6.3:+4721657 None:intergenic
TCGGCTCTCGATCCAGCTCA+TGG 0.496091 6.3:-4715207 MS.gene20574:CDS
AGGGCTGAGGACAGGAAAGC+AGG 0.496502 6.3:-4717418 MS.gene20574:CDS
CTGCTGGTGATGAATGCTCC+CGG 0.497940 6.3:-4716292 MS.gene20574:CDS
CTTCCATCACCTCCTACGTT+AGG 0.499594 6.3:+4717370 None:intergenic
TTTCAGGTGACCGATTTGCT+TGG 0.499956 6.3:-4719210 MS.gene20574:intron
GCAGAGGAAGCGTGAGAGCA+GGG 0.504129 6.3:-4720894 MS.gene20574:CDS
CTAACAGAGAGTCCAATTCA+AGG 0.504818 6.3:-4717345 MS.gene20574:CDS
TTGAAGATGTGAAGGATTCA+AGG 0.505444 6.3:-4716082 MS.gene20574:CDS
ACTTGCATTTGCCGCATCCC+GGG 0.505886 6.3:+4721105 None:intergenic
AAAGAAAACGGTTCTCTTGG+TGG 0.506625 6.3:-4717238 MS.gene20574:CDS
AATAACGAACAAGTTTATAC+AGG 0.511876 6.3:+4717551 None:intergenic
TACATTAGCACTCGGAGACT+TGG 0.511993 6.3:+4716850 None:intergenic
TAAAGAGAAGCAGCAGAAAG+AGG 0.512413 6.3:-4717665 MS.gene20574:CDS
TATGGTCAAGGCCCCGGAGG+TGG 0.512978 6.3:-4722037 MS.gene20574:CDS
TTAGAGCCACTTGCTGCTGA+TGG 0.513114 6.3:-4718871 MS.gene20574:intron
GTTTCCAGGACTGACACTAC+TGG 0.514491 6.3:-4721746 MS.gene20574:intron
AATATATAAATTAATCAGAC+AGG 0.514617 6.3:-4715590 MS.gene20574:intron
GCTGCCAATGATAAAGAAAA+CGG 0.515018 6.3:-4717250 MS.gene20574:CDS
CCATGAATTTACAGTTTAGG+TGG 0.516414 6.3:+4713952 None:intergenic
TTACAGGCAGAGCATGAGTT+GGG 0.517425 6.3:+4717993 None:intergenic
GCTGCTCATGATGATAAAGA+TGG 0.518148 6.3:-4720752 MS.gene20574:CDS
AATGAAGTTGATGGTAGAGT+AGG 0.518384 6.3:-4717304 MS.gene20574:CDS
GACAGAAACCTCTCTGATAA+CGG 0.520965 6.3:+4716149 None:intergenic
TAAAGATATGGTCAAGGCCC+CGG 0.522247 6.3:-4722043 MS.gene20574:intron
TTTAACACTTTCCTGCCAAA+GGG 0.523436 6.3:-4721668 MS.gene20574:CDS
GGTGGAGTTAACGGAGGAGG+AGG 0.526833 6.3:-4722004 MS.gene20574:CDS
GAAAGCAGTGATAAAGCCCC+TGG 0.527581 6.3:-4717160 MS.gene20574:CDS
GCTAGTCAGCGATCTGAGCT+TGG 0.528684 6.3:-4718572 MS.gene20574:CDS
AAGGACCTACAGATTGAAAC+CGG 0.529512 6.3:+4715342 None:intergenic
AGAATGCTTTCCAAGCAAAT+CGG 0.530128 6.3:+4719200 None:intergenic
TGTTCAGATGTGAAGATGAC+AGG 0.530892 6.3:-4718454 MS.gene20574:intron
GGAGGTGGAGTTAACGGAGG+AGG 0.532963 6.3:-4722007 MS.gene20574:CDS
CATTGGCAGCTACACTAGTC+CGG 0.534099 6.3:+4717263 None:intergenic
ACAGCAACAGCAGCAATCTC+GGG 0.534699 6.3:+4715167 None:intergenic
AGTCGGAAAGGGCTGAGGAC+AGG 0.535860 6.3:-4717426 MS.gene20574:CDS
CTGTGCATTTGAATCTCCAT+AGG 0.536629 6.3:+4716466 None:intergenic
AAGCTTAGCGTCTTCCTCAT+CGG 0.537190 6.3:+4715466 None:intergenic
ACACTACTGGTGTCATAGCA+AGG 0.537234 6.3:-4721733 MS.gene20574:CDS
TGATTGTGTAGGTATGAAGA+GGG 0.537685 6.3:-4722756 None:intergenic
ACTAACACGCCATTGGCCAC+TGG 0.538334 6.3:+4716599 None:intergenic
TTCCTCCTCATGATCTTCCC+GGG 0.538480 6.3:+4716274 None:intergenic
CGAGAGTGAAGGTGAAGCAG+AGG 0.539112 6.3:-4716219 MS.gene20574:CDS
ATCGTTCAGACTATTGCTGC+AGG 0.539751 6.3:-4717637 MS.gene20574:CDS
ATGGAACATGATGATGTTGA+TGG 0.540343 6.3:-4716248 MS.gene20574:CDS
TGGAGGACGCCATCAATTTG+CGG 0.540685 6.3:+4713972 None:intergenic
ACTCTTTCAAACATATGCGC+AGG 0.541044 6.3:-4718496 MS.gene20574:CDS
ATCACGATCATCCAAGTTGG+AGG 0.541515 6.3:-4718842 MS.gene20574:CDS
GTTCTCAACTAACACGCCAT+TGG 0.541755 6.3:+4716592 None:intergenic
AGCTGGATCGAGAGCCGAGA+AGG 0.542987 6.3:+4715212 None:intergenic
TGAAATCTTTCATGACCTCA+AGG 0.544794 6.3:+4721876 None:intergenic
GCGGCAAATGCAAGTAGATA+AGG 0.545427 6.3:-4721097 MS.gene20574:intron
CCCAATCGCATGAGTCGGAA+AGG 0.547446 6.3:-4717438 MS.gene20574:CDS
GCGTGAGAGCAGGGATAGAA+GGG 0.547489 6.3:-4720885 MS.gene20574:CDS
ATTTAACACTTTCCTGCCAA+AGG 0.547821 6.3:-4721669 MS.gene20574:CDS
CAGTGAAGTGATCTTCAATA+CGG 0.549092 6.3:+4718200 None:intergenic
GTCTTATGTGCTATTCACAT+TGG 0.549324 6.3:-4715620 MS.gene20574:CDS
TTTATCACGATCATCCAAGT+TGG 0.549919 6.3:-4718845 MS.gene20574:CDS
GCCGGTAGAAGTCGGTAGCT+CGG 0.551433 6.3:+4718706 None:intergenic
GCACCTAACGTAGGAGGTGA+TGG 0.551899 6.3:-4717373 MS.gene20574:CDS
AAGATACAAGGAGAAGTACA+TGG 0.552134 6.3:-4718776 MS.gene20574:CDS
AACTCGAAATGTGGAATGAG+AGG 0.553226 6.3:+4717604 None:intergenic
CACTGGTACTGGAGGTGGAG+CGG 0.553326 6.3:+4716616 None:intergenic
CGTATTGAAGATCACTTCAC+TGG 0.555491 6.3:-4718199 MS.gene20574:intron
ATTACAGGCAGAGCATGAGT+TGG 0.556003 6.3:+4717992 None:intergenic
GCATTGTATAATTTGCTCGA+TGG 0.557862 6.3:-4715697 MS.gene20574:CDS
CGACCCTTTGCTTCATCACG+TGG 0.558667 6.3:-4722692 MS.gene20574:CDS
GAACATAGGCGTGAGACGGA+TGG 0.558726 6.3:-4718814 MS.gene20574:CDS
ATTTCCTTCTATCGTCATTG+TGG 0.560313 6.3:+4716438 None:intergenic
GCATGAGTCGGAAAGGGCTG+AGG 0.562256 6.3:-4717431 MS.gene20574:CDS
GAAAAGTCAAACTCGAAATG+TGG 0.564709 6.3:+4717595 None:intergenic
TTGATTGTGTAGGTATGAAG+AGG 0.565183 6.3:-4722757 None:intergenic
TCTCGCTGCTTGTTCATCAG+AGG 0.565468 6.3:+4717120 None:intergenic
GACGGATGGAGGTAAAGAGA+AGG 0.565586 6.3:-4718800 MS.gene20574:CDS
TGCTAATGTACCTTTGGTGG+AGG 0.568531 6.3:-4716837 MS.gene20574:intron
GAGCGGGGTTCTATGGCACC+CGG 0.569077 6.3:-4721123 MS.gene20574:CDS
AGCAGTGTGCATATGTCCCC+AGG 0.569312 6.3:-4717067 MS.gene20574:intron
CCAATCGCATGAGTCGGAAA+GGG 0.570311 6.3:-4717437 MS.gene20574:CDS
TACAGGATGTACCTTGCGTA+AGG 0.570569 6.3:+4715838 None:intergenic
TCAGCATCAGTAGGTCGGGT+TGG 0.570850 6.3:+4716896 None:intergenic
GAGAGTGAAGGTGAAGCAGA+GGG 0.572305 6.3:-4716218 MS.gene20574:CDS
ATCACCACGTGATGAAGCAA+AGG 0.572307 6.3:+4722688 None:intergenic
AGACATCAGCATCAGTAGGT+CGG 0.572882 6.3:+4716891 None:intergenic
TATACGAGTATGAAAAGTCT+CGG 0.573722 6.3:-4715436 MS.gene20574:CDS
TGAATTTACAGTTTAGGTGG+AGG 0.574319 6.3:+4713955 None:intergenic
TGAAAGTTACGTACATCGGC+CGG 0.575323 6.3:+4718688 None:intergenic
AACAACGTTTGCAGTCGCTA+AGG 0.575680 6.3:+4718731 None:intergenic
TGTTGAAAATAAGATTAGTG+TGG 0.575761 6.3:-4718233 MS.gene20574:CDS
CGCTCCACCTCCAGTACCAG+TGG 0.577034 6.3:-4716615 MS.gene20574:CDS
TCCGAGCTACCGACTTCTAC+CGG 0.577448 6.3:-4718707 MS.gene20574:CDS
TGCTGGTGATGAATGCTCCC+GGG 0.577683 6.3:-4716291 MS.gene20574:CDS
TAAAGAGAAGGAAAGATACA+AGG 0.578798 6.3:-4718788 MS.gene20574:CDS
GGTATATGTTCTCCTCATGA+AGG 0.581471 6.3:+4715363 None:intergenic
ATCTGTGACTTCCGGAAGCG+AGG 0.588696 6.3:-4718522 MS.gene20574:CDS
CATCTTTACCGTTATCAGAG+AGG 0.590079 6.3:-4716157 MS.gene20574:CDS
TTCATGAGGAGAACATATAC+CGG 0.591256 6.3:-4715361 MS.gene20574:CDS
GCAGATACATGCTTTGTGAG+AGG 0.591857 6.3:+4716116 None:intergenic
ACCAAGCATCGGTTCCAAGA+AGG 0.594776 6.3:+4717468 None:intergenic
TCGGTCTCGCAGGGAAAGAG+AGG 0.595406 6.3:-4714002 MS.gene20574:CDS
CAATGCAGCGCCTCAATGAG+CGG 0.595730 6.3:-4721140 MS.gene20574:CDS
CCATAGAACCCCGCTCATTG+AGG 0.596542 6.3:+4721130 None:intergenic
TCAGATCGCTGACTAGCAGT+AGG 0.596565 6.3:+4718578 None:intergenic
ATGTGAATAGCACATAAGAC+TGG 0.597599 6.3:+4715623 None:intergenic
CCTCCAGTACCAGTGGCCAA+TGG 0.597633 6.3:-4716608 MS.gene20574:CDS
GAAGCTGGTGAAGATGTGTC+AGG 0.597921 6.3:-4716323 MS.gene20574:CDS
GATAACACTTGATGAGGATG+AGG 0.597977 6.3:-4721639 MS.gene20574:CDS
TGTGTATAAAGATATGGTCA+AGG 0.598429 6.3:-4722049 MS.gene20574:intron
ATGAAAAGTCTCGGAAACCT+GGG 0.598934 6.3:-4715427 MS.gene20574:CDS
CTCCTCAGAGTCAGCATTCG+GGG 0.599631 6.3:+4716502 None:intergenic
ATCAGCTTCTCGGTCTCGCA+GGG 0.600655 6.3:-4714011 MS.gene20574:CDS
GTACATCGGCCGGTAGAAGT+CGG 0.605281 6.3:+4718698 None:intergenic
TGAAGCAGAAACAAGAGGAG+TGG 0.606159 6.3:-4717958 MS.gene20574:CDS
AACTTCCCAATCGCATGAGT+CGG 0.608820 6.3:-4717443 MS.gene20574:CDS
GATGTACTTGATGATGATGA+TGG 0.609778 6.3:+4714031 None:intergenic
AGGGTTAAGGAACTATTCAA+AGG 0.610387 6.3:-4721713 MS.gene20574:CDS
AAAATATGACATGTTCCTTG+AGG 0.610450 6.3:-4721891 MS.gene20574:CDS
ATAGAGACATCAGCATCAGT+AGG 0.611342 6.3:+4716887 None:intergenic
TGGGAAGTTACACCAAGCAT+CGG 0.611514 6.3:+4717457 None:intergenic
TATCACCTCCAGCCTCTGGA+CGG 0.613337 6.3:+4716387 None:intergenic
GATATCTTGCAACTCATCCA+AGG 0.615932 6.3:-4714808 MS.gene20574:intron
ACTTGTTCGTTATTCATGTG+AGG 0.618582 6.3:-4717542 MS.gene20574:CDS
CAGAGAACATAGGCGTGAGA+CGG 0.618824 6.3:-4718818 MS.gene20574:CDS
AAATGACCATCAGCAGCAAG+TGG 0.621642 6.3:+4718865 None:intergenic
AATGGAGCATGCTGTGTGGA+AGG 0.623233 6.3:+4721174 None:intergenic
TCACCACGTGATGAAGCAAA+GGG 0.623273 6.3:+4722689 None:intergenic
GGAGGACGAGCACCGTCCAG+AGG 0.623885 6.3:-4716399 MS.gene20574:CDS
AGAACTGTTTAACAAATCCA+GGG 0.625745 6.3:+4717143 None:intergenic
CACTACTGGTGTCATAGCAA+GGG 0.626400 6.3:-4721732 MS.gene20574:CDS
ACCAAAGGTACATTAGCACT+CGG 0.627066 6.3:+4716842 None:intergenic
TCTGTTGCACCTAACGTAGG+AGG 0.627975 6.3:-4717379 MS.gene20574:CDS
TTCAAACTTGGCATTCTCGG+CGG 0.628512 6.3:+4715672 None:intergenic
TCGATTGAAGCAGAAACAAG+AGG 0.630186 6.3:-4717963 MS.gene20574:CDS
CTCCGCCACCACCACCTCCG+GGG 0.631309 6.3:+4722026 None:intergenic
TGCACATGTTATCCTTCATG+AGG 0.631484 6.3:-4715375 MS.gene20574:CDS
TTCTGATGCTGAAATTCACG+AGG 0.632331 6.3:-4717575 MS.gene20574:CDS
CCCGAATGCTGACTCTGAGG+AGG 0.632506 6.3:-4716501 MS.gene20574:CDS
ATATGAGATAACACTTGATG+AGG 0.638086 6.3:-4721645 MS.gene20574:CDS
ATGCTCCCGGGAAGATCATG+AGG 0.641352 6.3:-4716279 MS.gene20574:CDS
GTGTCAGGAAGTGAGTCTGC+TGG 0.641941 6.3:-4716308 MS.gene20574:CDS
CTCACTATAAACCTCAGTGA+TGG 0.642207 6.3:+4721380 None:intergenic
CCATTGGCCACTGGTACTGG+AGG 0.644559 6.3:+4716608 None:intergenic
CATCACTGAGGTTTATAGTG+AGG 0.647512 6.3:-4721379 MS.gene20574:intron
CATAGGCGTGAGACGGATGG+AGG 0.647806 6.3:-4718811 MS.gene20574:CDS
GGAGAAGTTGAGCAGCGCTG+AGG 0.647893 6.3:-4720006 MS.gene20574:CDS
GAAACTCATACCTCCACCAA+AGG 0.649483 6.3:+4716827 None:intergenic
TGAAGATGTGAAGGATTCAA+GGG 0.650035 6.3:-4716081 MS.gene20574:CDS
AGCGGGGTTCTATGGCACCC+GGG 0.656076 6.3:-4721122 MS.gene20574:CDS
ATCCCCGAATGCTGACTCTG+AGG 0.661035 6.3:-4716504 MS.gene20574:CDS
GCAAGTACTGAATGATCACT+GGG 0.663594 6.3:-4718546 MS.gene20574:CDS
CAGAAACAAACCGAAATATG+GGG 0.665228 6.3:-4714901 MS.gene20574:CDS
CTCGTCAGCTCGTTTAGCAG+CGG 0.666549 6.3:+4718270 None:intergenic
AGATACAAGGAGAAGTACAT+GGG 0.666573 6.3:-4718775 MS.gene20574:CDS
GATGGTAAAGCCGAGAGTGA+AGG 0.667991 6.3:-4716230 MS.gene20574:CDS
GAAATACGAGTCTAGAAATG+GGG 0.668085 6.3:-4716420 MS.gene20574:CDS
GTTCTACAGATCCTTACGCA+AGG 0.668821 6.3:-4715849 MS.gene20574:intron
AGTTGGAGGACAGAGAACAT+AGG 0.668867 6.3:-4718828 MS.gene20574:CDS
GAACGCCTATATGGTGACCA+TGG 0.669220 6.3:-4718046 MS.gene20574:CDS
CTCCCGGGAAGATCATGAGG+AGG 0.670660 6.3:-4716276 MS.gene20574:CDS
ATACGAGTCTAGAAATGGGG+AGG 0.677243 6.3:-4716417 MS.gene20574:CDS
TCAAACTGTTGCAACCGATG+AGG 0.677271 6.3:-4715480 MS.gene20574:CDS
TGAACTTTCACAAAGAGCAG+AGG 0.678988 6.3:-4720910 MS.gene20574:CDS
TGTCTAAGACATCAAGACCA+TGG 0.679362 6.3:+4718029 None:intergenic
ATGCAGCGCCTCAATGAGCG+GGG 0.680696 6.3:-4721138 MS.gene20574:CDS
GAACTGTTTAACAAATCCAG+GGG 0.690057 6.3:+4717144 None:intergenic
GGCGGAGGTGGAGTTAACGG+AGG 0.690346 6.3:-4722010 MS.gene20574:CDS
AGTTCTGTTGCACCTAACGT+AGG 0.693937 6.3:-4717382 MS.gene20574:CDS
ACATGATCTTGATAACAGCA+GGG 0.695132 6.3:-4720840 MS.gene20574:CDS
AGAGTGAAGGTGAAGCAGAG+GGG 0.699362 6.3:-4716217 MS.gene20574:CDS
ACCAAATGGAGCATGCTGTG+TGG 0.702132 6.3:+4721170 None:intergenic
GAGCACCGTCCAGAGGCTGG+AGG 0.711256 6.3:-4716392 MS.gene20574:CDS
CTTTCCAGTAAAATGCCGTG+AGG 0.738774 6.3:+4715080 None:intergenic
GTCGGGTTGGAGTAAGTACG+CGG 0.743399 6.3:+4716909 None:intergenic
AGATATGGTCAAGGCCCCGG+AGG 0.748835 6.3:-4722040 MS.gene20574:CDS
AGAGCACAAGACCATCACTG+AGG 0.814963 6.3:-4721391 MS.gene20574:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.3 gene 4713967 4722765 4713967 ID=MS.gene20574
chr6.3 mRNA 4713967 4722765 4713967 ID=MS.gene20574.t1;Parent=MS.gene20574
chr6.3 exon 4722686 4722765 4722686 ID=MS.gene20574.t1.exon1;Parent=MS.gene20574.t1
chr6.3 CDS 4722686 4722765 4722686 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4721866 4722060 4721866 ID=MS.gene20574.t1.exon2;Parent=MS.gene20574.t1
chr6.3 CDS 4721866 4722060 4721866 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4721574 4721760 4721574 ID=MS.gene20574.t1.exon3;Parent=MS.gene20574.t1
chr6.3 CDS 4721574 4721760 4721574 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4721380 4721478 4721380 ID=MS.gene20574.t1.exon4;Parent=MS.gene20574.t1
chr6.3 CDS 4721380 4721478 4721380 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4721098 4721271 4721098 ID=MS.gene20574.t1.exon5;Parent=MS.gene20574.t1
chr6.3 CDS 4721098 4721271 4721098 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4720744 4721017 4720744 ID=MS.gene20574.t1.exon6;Parent=MS.gene20574.t1
chr6.3 CDS 4720744 4721017 4720744 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4719932 4720068 4719932 ID=MS.gene20574.t1.exon7;Parent=MS.gene20574.t1
chr6.3 CDS 4719932 4720068 4719932 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4719151 4719226 4719151 ID=MS.gene20574.t1.exon8;Parent=MS.gene20574.t1
chr6.3 CDS 4719151 4719226 4719151 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4719029 4719058 4719029 ID=MS.gene20574.t1.exon9;Parent=MS.gene20574.t1
chr6.3 CDS 4719029 4719058 4719029 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4718702 4718889 4718702 ID=MS.gene20574.t1.exon10;Parent=MS.gene20574.t1
chr6.3 CDS 4718702 4718889 4718702 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4718455 4718609 4718455 ID=MS.gene20574.t1.exon11;Parent=MS.gene20574.t1
chr6.3 CDS 4718455 4718609 4718455 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4718200 4718327 4718200 ID=MS.gene20574.t1.exon12;Parent=MS.gene20574.t1
chr6.3 CDS 4718200 4718327 4718200 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4717834 4718088 4717834 ID=MS.gene20574.t1.exon13;Parent=MS.gene20574.t1
chr6.3 CDS 4717834 4718088 4717834 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4717068 4717712 4717068 ID=MS.gene20574.t1.exon14;Parent=MS.gene20574.t1
chr6.3 CDS 4717068 4717712 4717068 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4716838 4716932 4716838 ID=MS.gene20574.t1.exon15;Parent=MS.gene20574.t1
chr6.3 CDS 4716838 4716932 4716838 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4716034 4716645 4716034 ID=MS.gene20574.t1.exon16;Parent=MS.gene20574.t1
chr6.3 CDS 4716034 4716645 4716034 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4715850 4715947 4715850 ID=MS.gene20574.t1.exon17;Parent=MS.gene20574.t1
chr6.3 CDS 4715850 4715947 4715850 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4715591 4715729 4715591 ID=MS.gene20574.t1.exon18;Parent=MS.gene20574.t1
chr6.3 CDS 4715591 4715729 4715591 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4715352 4715504 4715352 ID=MS.gene20574.t1.exon19;Parent=MS.gene20574.t1
chr6.3 CDS 4715352 4715504 4715352 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4715080 4715243 4715080 ID=MS.gene20574.t1.exon20;Parent=MS.gene20574.t1
chr6.3 CDS 4715080 4715243 4715080 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4714809 4714920 4714809 ID=MS.gene20574.t1.exon21;Parent=MS.gene20574.t1
chr6.3 CDS 4714809 4714920 4714809 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
chr6.3 exon 4713967 4714113 4713967 ID=MS.gene20574.t1.exon22;Parent=MS.gene20574.t1
chr6.3 CDS 4713967 4714113 4713967 ID=cds.MS.gene20574.t1;Parent=MS.gene20574.t1
Gene Sequence

>MS.gene20574

ATGAAGAGGGCTAGAGATGATATTTACTCTGCTTCTGCTTCTCAATTCAAACGACCCTTTGCTTCATCACGTGGTGATTCGTATGTTTTTTGATCTTGATTTTATTAATATTATCATTTGAATTTGAAAATTTGATTATGGTATTTTTTTTGCCGTATTTTGTGTTAATGCACCAATTTTGTTTTTTCAGTATTTTGGGTTAGTTTTGTGCCCTAATTTTGTGTTTCACTGTTGAATTGTTGAATTTGAATTCATATACTTATATCTATTTCACTTATGGTGTGAAATTGTTGTTGAATTTCATTACGGTTATGTTTGATTTGAATTTAATTTGATTTGGAATTAGTTTTGTGCCCTAATTTTGTGTTTCACTGTTGAATTTTAAATTTTGAATTCATATACCTATATCTATCTCACTTGTGGTGTTTAATTGTTGTCGAATTTCATTAGGGTTATGTTTCATTTGAGTTTAAATTGATTGTGGAGTTTTTGTATAAAACTTACTAGGCAAGTAATACGAGTTATGTTGAAAGTTGAAGAACTCAGTAATACGAGTAATGTTGAAAATTGAAGAACTCCTTGTGTGCATGTATTTGTGGATTGAAGAATATTATGAATTTTGATAGTGTTGTAGGTTGTGATTAGCATGTTGTAGTTGTTGATAATTAGGGTTTCTGAAATTGTGATTGCATTTTGTGTATAAAGATATGGTCAAGGCCCCGGAGGTGGTGGTGGCGGAGGTGGAGTTAACGGAGGAGGAGGTGGGGGAGCAACTACCTCCCAAAAATTGACAACCAATGATGCTTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAAAAAGAAAAATATGACATGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAAAAGTATGTTCTTAAACATTTGTACGTTTTGTAATGATTTTGAATGACGGAACATTGTGCCTAAACAATCAGGGGATCTTAATATTATTTATTTTTGGCTGTTTCCAGGACTGACACTACTGGTGTCATAGCAAGGGTTAAGGAACTATTCAAAGGTCACAACCATTTGATTTTTGGATTTAACACTTTCCTGCCAAAGGGATATGAGATAACACTTGATGAGGATGAGGACGAAGCTCCTCCGAAGAAAACGGTTGAATTTGAAGAAGCTATTAGTTTTGTGAACAAGATAAAGGTAATGTACTTTTTTTTTTCTTCCATTCCAGTTACCGAGTTAGTTTACCGGTATAATTGATTCGTAGCTTTAATTGGTTGGTTTTTCTTCCACAGAAACGTTTCCAAAATGATGAACATGTTTACAAATCATTTTTGGACATTTTGAATATGTATCGCAAAGAGCACAAGACCATCACTGAGGTTTATAGTGAGGTAATAGCTTTGTCCTATAAATTTTTGGCACTTTGCTTTCTTTTTTCTTATTTTTTTGTTTAAAAAAATTGGCTGAAATGTTTACTTTTTTTAAATAAAAAACTCTAGGTTGCTACCCTTTTTAAGTCGCATGGAGATTTGCTCGATGAGTTCACCAGATTCTTACCAGATAATTCTTCAGCACCTTCCACACAGCATGCTCCATTTGGTCGAAATTCAATGCAGCGCCTCAATGAGCGGGGTTCTATGGCACCCGGGATGCGGCAAATGCAAGTAGATAAGGTAGTAAGAGCCTTCCTCTTCATAACGATTTTTGTACTTTTTGAAGAAAAGAACATTTTCATAAAAACTTACTTTTACAGCAACGATATCGGCGAGACCGATTTTCTTCTCATGATCGTGATATGAGTGTTGAACGTCCTGATCTGGATGATGACAAAACAATGATGAACTTTCACAAAGAGCAGAGGAAGCGTGAGAGCAGGGATAGAAGGGTGCGCGATCACGATGATAGAGAACATGATCTTGATAACAGCAGGGATTTGCACTCACAACGCTTTCCTGACAAAAAGAAATCTGTTAAGAAGACTGAAGCTTATGACTTTGCTGCTCATGATGATAAAGATGGAATGAAGCGTAAGATATCATACTATGCTCTGGATTATTACATTTGAGTCTATATTTATTACATTTTTGGTTCTCACTGTTATTTTAGTTTGCCTGTGAACCATCATGTTTTCAATATGCTGTAGATTTCTATATACTTGTGTTATAAAATATAACGGTTATTGGCACTAGTGTCACAGCCTAAAAAAATTATGAGGAAATGAAACTATAATTACTTTTCTATATTATCAAACACTCAAATTTTAGATACAGAGAGATTGACGTAGATCAATATGAGTGGACGTAGATCATTGTTATAAAACTATCAAATTTGACTCCACTATTTCTTCTTATTTGTTTGGATACAAGAATTTATATTTGTTTGGATACAAGACTCCATTATTTATATTACTGCCATATCACTTTTTCTTTCTTTACAAGTTGTTAGATGCATAGAACTTACTATTAGGACGGTAACAATTGTTGAATGATGCAGTCCCATGTTTGGAGTTAAAAAAAATGAACGTATGCATGATTAAATTTAGCCATGTCAAGTTTCTTGAATTTTTTTTTTATTAGTATTTGTTTGTCCTGTTGGCATCTTTCTTGATTATTAGCTTTCTTGATTTTTATCTGAGACAATATTGACCTTTATAATTTTCTATGTTTTGTTACTTATTTATTTAATTTTTGTATTTGTAGCAGTCATGTATAGTCAAGCAATCAGTTTCTGCGATAAAGTTAAGGAGAAGTTGAGCAGCGCTGAGGACTACCAAACATTCTTGAAGTGCCTTAATATTTTTGGCAACGGAATTATAAAAAAGAATGATTTACAAAATTTGGTATGTGCTTCATTTTCGTATTGGATCGTTTATGTCACGTTGCTCCCTTTAGATCTCTAGGACTTTTATAAAGTTTCATTAGTTGAATTATGAAAATTAGTTAGTTAACATTATTTACTACTCAAATGCTTTCACTTATGGGATATGCAACTTTGGACAAATTATTTGGTACGCATTTGCACAGCCTTAGCCGAAAAGAAAATGATAGGAGCTTTCATAGTGTGTATGAAAGGTTTAGGGTCACAGAAAACTGCCAGTCTCTTGTTAAACTTGGAACTTCTGATCTAGTCTCACATTTTTGGCTGCACTATAGCAAGTGTCTGAGATTGTAATCTAATATTGCATTTTCTTATATAATTATACATATTTAGATTGGATGTCTATGGTTGTGTAAGTTCCCAACCCTAGTTTTTGGATTGTCATTCTGGTTTGTGCCTGGGATGTTTGAATAACCTTCAGCCACTAACAGAAGATGTTACTTCTCTCTTTAAGTTAAACTTACATATAAAATTATGTAACGAGTTTGAAAGAATTTCAATAGTATTCCAATTTATCATTTTCTGTTGTACTCTAATGCAATGTATATGTTTTATCAATTCATTGAAGTAGGCGATTACTTTGTTAATTTCACTATCTCATAAGCATTACCTTGTGAGTTCTATTGACTCCAGAGCAATTTATATCCTTTTGAAATGTATGTTTCAGGTGACCGATTTGCTTGGAAAGCATTCTGATCTAATGAGCGAATTCAATGATTTCTTAGAGCGTTGTGAAAATATTGGTAATTACTCTTCAACTCTTCTGTTTATTGTTGTCGATGTTATCATATTTACTCATTCCTTGGGGTTTTCTTGTGCCTATTTGTTTTTGCAGACGGGTTCCTTGCTGGTGTCATGAGTAAAAGTATGTTTATGCTTATATCATTACAATTTTTTACTTCATTTTAGGAGTCATTCAAATGATGTTGAATTAGCTGAATAATTTAAGCATTTTTTTTTCATTCATTTGGTTAATTTTATTGTTGAAATTATATTGATTTTAGAGCCACTTGCTGCTGATGGTCATTTATCACGATCATCCAAGTTGGAGGACAGAGAACATAGGCGTGAGACGGATGGAGGTAAAGAGAAGGAAAGATACAAGGAGAAGTACATGGGAAAATCCATTCAAGAACTTGACCTTAGCGACTGCAAACGTTGTTCTCCGAGCTACCGACTTCTACCGGCCGATGTACGTAACTTTCAAATCGATTACTTTTCTTGTTGGTTTTGTCAAATGCACTGTTCTTGTGAAACTCCTTCACACCTTTTGTGTTCTTGCAGTATCCAATTCCTACTGCTAGTCAGCGATCTGAGCTTGGTGCGCAAGTACTGAATGATCACTGGGTATCTGTGACTTCCGGAAGCGAGGATTACTCTTTCAAACATATGCGCAGGAATCAATACGAAGAAAGCTTGTTCAGATGTGAAGATGACAGGTAAAAATTGTTCTGTTTTGCTGCTCCTGAATGCAATGTTCATTTCAGAGTCATTGGTTTGTCTTAAGATATAGTGTGTCGACATTGTTGGCATTTAGAGGTGATAACATTGTTATTTCTGATGTAGGTTTGAGCTGGACATGTTATTAGAGTCTGTAAGTTCCGCTGCTAAACGAGCTGACGAGTTGTACAACAGCATTGTTGAAAATAAGATTAGTGTGGAGAGTCTAAGCCGTATTGAAGATCACTTCACTGGTATGTGTCAAAATAATCTCATTCTAAAGTGTTATTCACTGTAACCTTATTTCTCTACTTCGTTATAGCATCATGAATTGATTTTTATCCGATATATACATGTTTATGCAGTTCTAAATCTAAGGTGCATTGAACGCCTATATGGTGACCATGGTCTTGATGTCTTAGACATACTGCGTAAGAACCCAACTCATGCTCTGCCTGTAATATTGACTCGATTGAAGCAGAAACAAGAGGAGTGGAATAGGTGTCGTTCAGATTTCAATAAAGTTTGGGCTGACATTTATTCTAAAAATCACTACAAATCACTTGATCATCGTAGCTTCTATTTCAAGCAACAAGATTCGAAGAACTTGAGCACAAAATGTAAGTCAATCTTAAATAATAATGACTGAATTGCATTGAACTCTGTACTAAATTGGTTGCGAGTTTAGTGGTATATCATCATCTTAATCTGTTGCAATATTTCATGTTTGGCAATATACAGCTTTGGTGACTGAGATCAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGACATCGTTCAGACTATTGCTGCAGGAGCAAAACATCCTCTCATTCCACATTTCGAGTTTGACTTTTCTGATGCTGAAATTCACGAGGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAAGTATTCCAAAGTAAAGAGTTATTCAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAACCGATGCTTGGTGTAACTTCCCAATCGCATGAGTCGGAAAGGGCTGAGGACAGGAAAGCAGGACACAACGCTCGAAGTTCTGTTGCACCTAACGTAGGAGGTGATGGAAGCCCTAACAGAGAGTCCAATTCAAGGCTACCAAAATCTGACAAGAATGAAGTTGATGGTAGAGTAGGTGAAGTTAAAAATGGTCACCGGACTAGTGTAGCTGCCAATGATAAAGAAAACGGTTCTCTTGGTGGCGAGCTTGTTAGTAGAGATGATCATTTAATGGATAATAAAGGGCAGAAAAGTGTTGAAAGCAGTGATAAAGCCCCTGGATTTGTTAAACAGTTCTCCTCTGATGAACAAGCAGCGAGAAACTCTGCATCTGTCACAATTAGAGGCGAAAGCAGTGTGCATATGTCCCCAGGTCCGTATACAACATAGTTGTGTACCACATGATTTTTTTTTTTTTCTATTTATATTAACTCAATTCATTTCTTTTGCACTTCTGTTTAATTAATTTTATTGTTGTCAGAATACTAAATTTTGTTTATATTTCAAGGCCGCGTACTTACTCCAACCCGACCTACTGATGCTGATGTCTCTATTGCTGTAGTCATAGCCAAGTCTCCGAGTGCTAATGTACCTTTGGTGGAGGTATGAGTTTCCATCTATGTCCAATGTCGAGTTCCTTTTATCTAGTTTTTATACTTAAAAGATAAACTAATTTTTTTAACTAAGATCTTTTTTTTTTAAAATACCGTTTGACCCAAACATAGCCTTAGTCGAATGGTTTTATTTTTTTAATGCTTATATTGATATCGGTATGTCGGCTTATCTCTGTCTTAGGGCGTTGCCGCTCCACCTCCAGTACCAGTGGCCAATGGCGTGTTAGTTGAGAACAGTAAAGTTAAAAGCAATGAAGAATCTTCTGTGCCTTGCAAAGTTGAAAAAGAAGAGGGTGAGTTATCCCCGAATGCTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGCACAGTCAAACCACAATGACGATAGAAGGAAATACGAGTCTAGAAATGGGGAGGACGAGCACCGTCCAGAGGCTGGAGGTGATAATGATGCAGATGCTGATGACGAAGACAGCGAAAATGTTTCTGAAGCTGGTGAAGATGTGTCAGGAAGTGAGTCTGCTGGTGATGAATGCTCCCGGGAAGATCATGAGGAGGAAGATATGGAACATGATGATGTTGATGGTAAAGCCGAGAGTGAAGGTGAAGCAGAGGGGATGTGTGATGCTGATGCACAAACTGGAGTAGATGGCTCATCTTTACCGTTATCAGAGAGGTTTCTGTCAACTGTGAAACCTCTCACAAAGCATGTATCTGCAGTTTCATTTGTTGAAGATGTGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTTTGTTCTCTTTAGGCTTCATCAAGTAAGAAAAATGTTGATTCTTTTTTGTTTATGTCGAAAAAATTTCCTTTGTGTTGATGTCTTATATATTCTTTATGAACTTGCCAGATTCTTTATGAAAGGATCTTATCTGCAAAAGAAAATTCAACAAGCGCTGAAATGAAATGGAAAACAAAAGATTCTAGTTCTACAGATCCTTACGCAAGGTACATCCTGTAATTATGTATTAGGTTTAAACTATATAATAACATTAGTACTTGTACTTTTCAATTCAATCAACATCATTTAGTTTTTATCTTATTTTCCACTGTTCTTTTTTTGTTTAGATTTATGGATGCATTGTATAATTTGCTCGATGGATCCGCCGAGAATGCCAAGTTTGAAGATGAATGTCGAGCAATTCTTGGAAACCAGTCTTATGTGCTATTCACATTGGACAAGTTAATATATAAATTAATCAGACAGGTATATTGCTTTATTCATTTGTCCTACATACTTGTCATTTGTTTCTCTTTAAAGGCTGTAAATGTAATAATATACCTACACTGTAGCTTCAAACTGTTGCAACCGATGAGGAAGACGCTAAGCTTCTCCAATTATACGAGTATGAAAAGTCTCGGAAACCTGGGAAATTAAATGATTCAGTATATCATTCAAATGCACATGTTATCCTTCATGAGGAGAACATATACCGGTTTCAATCTGTAGGTCCTTTGTAACCTGGAGCATTTGTTTTCTACTTCGTGATTTGTTATTTTTATTGTTATTGTTATCTGTTGTTAATGTTATTTTGCATTGTTATCTTATTGCAGTCTTCTAGTCCTTCTCGGCTCTCGATCCAGCTCATGGACAATATGAATGAAAAGCCCGAGATTGCTGCTGTTGCTGTTGATCCAGATTTTTCATTTTATCTGCACAATGATTTTCTGTCTGTCCTCCCTGGCAAAAAGGAGCCTCACGGCATTTTACTGGAAAGGTGCATCTTTTAGGGACTTAAAATCTATAAAAAATTATAGAGGCTAAAATCGACATTTGTTCAATTTATCATCCATCAATTCTTTATTTTAGCATTTTTATTTATTCATATTCAATTTAGTGATGCATAAGATTCTTATTTTTATTTTGCTCTTCTCAGAAACAAACCGAAATATGGGGACTTAGATGAGCTTTCTGCAATTTGTGCTGTAATGGAAGATGTCAAAGTAGTTAATGGATTGGAATGCAAGATATCTTGCAACTCATCCAAGGTATGCTTCTTTTTCATACTTGTGCTTGTGATTTTCCATTTTGCAGGTTAGTACTTTATTTATAATTAGTTAAAACACATGCAATGCACCTTTTATCAATATTTAAATCATTAAGATGAAATAAATAAATATATTAAAAAGTTTATTTTGATTCCTTAATAAGTTTTTCCTCATTTTTGTAGGATGAATAGACAATATTTTACAACTATTGGTATATAATTGGTATTAGAGATGAGAAACAAATGTTAATCTAACAAAGGAATTAGGTCTTTGTGCAACCGTTGTTTAGTCTGGAAACTTGTACAACACACCACTGTAGTTCTTGTAGCACCTGAGTTTTTATGTGTCATTATGAACCCTCTGGATTTGAAATGTTTGATTATATATAGTAGAATTTGAAGAACCTATATTTACAAGGTAATTTGATATTATTATTATTATTATTATCAGAATTTATTATTTATTATTTTTTGCAATACTTATTATTTCTTGAAAACCAATGAAAACAACCGAAAGCTTTTTCCCACTAAATTGTGTCAAAATAATTAACAAAAACAATGTTATAAAGTCTTGTCATGAATTAAATCCAATCCAAATGATGAATTGTTTAATTCTCAACTCTCTTGATATAATGTCATATAGTTTTTCTATCTTTGGCATATAGTTTTCTTCATGTTCACTATTTTCATCTGCAGATTTCTTATGTTCTCGACACACAAGATTTTTTCTTCCGACCAAGAAGGAAAAGACGAACACCATCATCATCATCAAGTACATCAGCTTCTCGGTCTCGCAGGGAAAGAGAGGAAAGATTCCGCAAATTGATGGCGTCCTCCACCTAA
Protein sequence

>MS.gene20574.t1

MKRARDDIYSASASQFKRPFASSRGDSYGQGPGGGGGGGGVNGGGGGGATTSQKLTTNDALSYLKEVKDMFQDQKEKYDMFLEVMKDFKAQKTDTTGVIARVKELFKGHNHLIFGFNTFLPKGYEITLDEDEDEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRKEHKTITEVYSEVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRLNERGSMAPGMRQMQVDKQRYRRDRFSSHDRDMSVERPDLDDDKTMMNFHKEQRKRESRDRRVRDHDDREHDLDNSRDLHSQRFPDKKKSVKKTEAYDFAAHDDKDGMKLMYSQAISFCDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAADGHLSRSSKLEDREHRRETDGGKEKERYKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHESERAEDRKAGHNARSSVAPNVGGDGSPNRESNSRLPKSDKNEVDGRVGEVKNGHRTSVAANDKENGSLGGELVSRDDHLMDNKGQKSVESSDKAPGFVKQFSSDEQAARNSASVTIRGESSVHMSPGRVLTPTRPTDADVSIAVVIAKSPSANVPLVEGVAAPPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQSNHNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEMKWKTKDSSSTDPYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATDEEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQSSSSPSRLSIQLMDNMNEKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTPSSSSSTSASRSRREREERFRKLMASST