Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20752.t1 | XP_029126074.1 | 39.3 | 820 | 258 | 7 | 1 | 601 | 1 | 799 | 7.60E-140 | 507.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20752.t1 | Q9SZL8 | 29.8 | 255 | 158 | 6 | 12 | 256 | 22 | 265 | 5.7e-19 | 97.4 |
MS.gene20752.t1 | Q9SZL8 | 23.4 | 244 | 185 | 2 | 246 | 489 | 478 | 719 | 3.6e-13 | 78.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20752.t1 | A0A396J342 | 34.6 | 728 | 248 | 5 | 5 | 508 | 11 | 734 | 7.4e-105 | 391.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene20752.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20752.t1 | MTR_7g446520 | 47.710 | 262 | 90 | 5 | 11 | 256 | 32 | 262 | 1.31e-64 | 215 |
MS.gene20752.t1 | MTR_7g028855 | 51.546 | 194 | 92 | 2 | 15 | 207 | 71 | 263 | 6.20e-56 | 196 |
MS.gene20752.t1 | MTR_7g446480 | 62.069 | 116 | 44 | 0 | 141 | 256 | 140 | 255 | 4.21e-43 | 157 |
MS.gene20752.t1 | MTR_7g446510 | 61.207 | 116 | 45 | 0 | 141 | 256 | 155 | 270 | 5.90e-41 | 152 |
MS.gene20752.t1 | MTR_5g076070 | 32.068 | 237 | 155 | 4 | 36 | 270 | 26 | 258 | 1.31e-33 | 130 |
MS.gene20752.t1 | MTR_1g070355 | 31.541 | 279 | 172 | 7 | 1 | 266 | 1 | 273 | 1.40e-33 | 135 |
MS.gene20752.t1 | MTR_6g022080 | 28.333 | 180 | 128 | 1 | 47 | 226 | 69 | 247 | 2.76e-24 | 102 |
MS.gene20752.t1 | MTR_8g468460 | 51.579 | 95 | 45 | 1 | 268 | 362 | 12 | 105 | 2.76e-20 | 86.7 |
MS.gene20752.t1 | MTR_0402s0040 | 31.818 | 176 | 117 | 2 | 65 | 240 | 28 | 200 | 4.62e-20 | 94.0 |
MS.gene20752.t1 | MTR_6g051425 | 28.796 | 191 | 133 | 3 | 71 | 259 | 25 | 214 | 1.43e-19 | 90.9 |
MS.gene20752.t1 | MTR_2g098880 | 32.168 | 143 | 92 | 3 | 29 | 167 | 23 | 164 | 3.55e-15 | 76.3 |
MS.gene20752.t1 | MTR_2g098880 | 32.168 | 143 | 92 | 3 | 29 | 167 | 35 | 176 | 4.61e-15 | 75.9 |
MS.gene20752.t1 | MTR_4g035820 | 29.333 | 225 | 139 | 8 | 69 | 286 | 81 | 292 | 3.57e-14 | 76.3 |
MS.gene20752.t1 | MTR_2g098920 | 37.500 | 104 | 61 | 2 | 68 | 171 | 85 | 184 | 2.61e-13 | 70.9 |
MS.gene20752.t1 | MTR_1g008290 | 33.333 | 114 | 71 | 2 | 132 | 245 | 18 | 126 | 2.81e-13 | 68.2 |
MS.gene20752.t1 | MTR_6g053140 | 30.719 | 153 | 88 | 5 | 14 | 156 | 44 | 188 | 2.26e-12 | 67.0 |
MS.gene20752.t1 | MTR_0645s0010 | 36.458 | 96 | 56 | 1 | 258 | 353 | 35 | 125 | 3.68e-12 | 64.3 |
MS.gene20752.t1 | MTR_8g467420 | 40.244 | 82 | 47 | 2 | 48 | 128 | 63 | 143 | 1.12e-11 | 63.9 |
MS.gene20752.t1 | MTR_2g101460 | 36.752 | 117 | 73 | 1 | 59 | 175 | 51 | 166 | 1.93e-11 | 64.3 |
MS.gene20752.t1 | MTR_2g101460 | 35.246 | 122 | 78 | 1 | 54 | 175 | 36 | 156 | 2.82e-11 | 63.5 |
MS.gene20752.t1 | MTR_4g067290 | 33.594 | 128 | 80 | 3 | 68 | 194 | 81 | 204 | 5.06e-11 | 63.9 |
MS.gene20752.t1 | MTR_4g067290 | 33.594 | 128 | 80 | 3 | 68 | 194 | 61 | 184 | 6.94e-11 | 63.2 |
MS.gene20752.t1 | MTR_0060s0090 | 40.845 | 71 | 41 | 1 | 75 | 145 | 68 | 137 | 7.02e-11 | 61.2 |
MS.gene20752.t1 | MTR_4g067290 | 33.594 | 128 | 80 | 3 | 68 | 194 | 121 | 244 | 7.42e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20752.t1 | AT4G38180 | 34.555 | 191 | 122 | 3 | 67 | 256 | 77 | 265 | 1.76e-22 | 102 |
MS.gene20752.t1 | AT4G38180 | 23.404 | 235 | 178 | 2 | 246 | 480 | 478 | 710 | 8.19e-15 | 78.6 |
MS.gene20752.t1 | AT1G10240 | 32.402 | 179 | 112 | 5 | 69 | 241 | 54 | 229 | 2.60e-17 | 86.3 |
MS.gene20752.t1 | AT1G10240 | 32.402 | 179 | 112 | 5 | 69 | 241 | 54 | 229 | 2.60e-17 | 86.3 |
MS.gene20752.t1 | AT4G15090 | 30.435 | 184 | 116 | 6 | 260 | 441 | 468 | 641 | 5.37e-16 | 82.4 |
MS.gene20752.t1 | AT4G15090 | 27.854 | 219 | 148 | 6 | 67 | 283 | 55 | 265 | 5.24e-14 | 75.9 |
MS.gene20752.t1 | AT4G15090 | 30.435 | 184 | 116 | 6 | 260 | 441 | 468 | 641 | 5.37e-16 | 82.4 |
MS.gene20752.t1 | AT4G15090 | 27.854 | 219 | 148 | 6 | 67 | 283 | 55 | 265 | 5.24e-14 | 75.9 |
MS.gene20752.t1 | AT4G15090 | 30.435 | 184 | 116 | 6 | 260 | 441 | 468 | 641 | 5.37e-16 | 82.4 |
MS.gene20752.t1 | AT4G15090 | 27.854 | 219 | 148 | 6 | 67 | 283 | 55 | 265 | 5.24e-14 | 75.9 |
MS.gene20752.t1 | AT4G15090 | 30.435 | 184 | 116 | 6 | 260 | 441 | 468 | 641 | 5.37e-16 | 82.4 |
MS.gene20752.t1 | AT4G15090 | 27.854 | 219 | 148 | 6 | 67 | 283 | 55 | 265 | 5.24e-14 | 75.9 |
MS.gene20752.t1 | AT4G15090 | 30.435 | 184 | 116 | 6 | 260 | 441 | 468 | 641 | 5.37e-16 | 82.4 |
MS.gene20752.t1 | AT4G15090 | 27.854 | 219 | 148 | 6 | 67 | 283 | 55 | 265 | 5.24e-14 | 75.9 |
MS.gene20752.t1 | AT4G38170 | 27.044 | 159 | 115 | 1 | 246 | 404 | 243 | 400 | 1.00e-14 | 77.8 |
MS.gene20752.t1 | AT5G18960 | 29.412 | 153 | 106 | 2 | 252 | 404 | 579 | 729 | 2.78e-14 | 76.6 |
MS.gene20752.t1 | AT5G18960 | 29.412 | 153 | 106 | 2 | 252 | 404 | 579 | 729 | 2.78e-14 | 76.6 |
MS.gene20752.t1 | AT3G22170 | 27.568 | 185 | 125 | 4 | 258 | 442 | 475 | 650 | 4.72e-14 | 76.3 |
MS.gene20752.t1 | AT3G22170 | 27.568 | 185 | 125 | 4 | 258 | 442 | 475 | 650 | 4.72e-14 | 76.3 |
MS.gene20752.t1 | AT2G27110 | 26.341 | 205 | 141 | 3 | 224 | 419 | 394 | 597 | 9.50e-14 | 75.1 |
MS.gene20752.t1 | AT2G27110 | 26.341 | 205 | 141 | 3 | 224 | 419 | 394 | 597 | 9.50e-14 | 75.1 |
MS.gene20752.t1 | AT2G27110 | 26.341 | 205 | 141 | 3 | 224 | 419 | 249 | 452 | 9.88e-14 | 74.7 |
MS.gene20752.t1 | AT3G06250 | 29.655 | 145 | 101 | 1 | 260 | 404 | 562 | 705 | 1.57e-13 | 74.3 |
MS.gene20752.t1 | AT3G06250 | 29.655 | 145 | 101 | 1 | 260 | 404 | 562 | 705 | 1.57e-13 | 74.3 |
MS.gene20752.t1 | AT3G06250 | 29.655 | 145 | 101 | 1 | 260 | 404 | 562 | 705 | 1.57e-13 | 74.3 |
MS.gene20752.t1 | AT3G59470 | 31.288 | 163 | 107 | 3 | 10 | 171 | 28 | 186 | 5.48e-13 | 70.1 |
MS.gene20752.t1 | AT3G59470 | 31.288 | 163 | 107 | 3 | 10 | 171 | 16 | 174 | 6.02e-13 | 69.7 |
MS.gene20752.t1 | AT3G59470 | 31.288 | 163 | 107 | 3 | 10 | 171 | 16 | 174 | 6.02e-13 | 69.7 |
MS.gene20752.t1 | AT3G07500 | 37.615 | 109 | 65 | 2 | 61 | 169 | 31 | 136 | 4.61e-12 | 66.2 |
MS.gene20752.t1 | AT5G28530 | 26.829 | 164 | 111 | 5 | 69 | 227 | 61 | 220 | 1.50e-11 | 67.8 |
MS.gene20752.t1 | AT5G28530 | 26.829 | 164 | 111 | 5 | 69 | 227 | 61 | 220 | 1.51e-11 | 67.8 |
MS.gene20752.t1 | AT5G28530 | 26.829 | 164 | 111 | 5 | 69 | 227 | 61 | 220 | 1.53e-11 | 67.8 |
MS.gene20752.t1 | AT5G28530 | 26.829 | 164 | 111 | 5 | 69 | 227 | 61 | 220 | 1.61e-11 | 67.8 |
MS.gene20752.t1 | AT5G28530 | 26.829 | 164 | 111 | 5 | 69 | 227 | 61 | 220 | 1.61e-11 | 67.8 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 454 | 559 | 6.80e-11 | 65.9 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 454 | 559 | 6.80e-11 | 65.9 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 397 | 502 | 6.92e-11 | 65.9 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 454 | 559 | 7.28e-11 | 65.9 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 454 | 559 | 7.40e-11 | 65.9 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 454 | 559 | 7.40e-11 | 65.9 |
MS.gene20752.t1 | AT4G19990 | 34.259 | 108 | 66 | 2 | 299 | 403 | 468 | 573 | 7.62e-11 | 65.9 |
MS.gene20752.t1 | AT1G76320 | 27.778 | 144 | 100 | 3 | 260 | 403 | 405 | 544 | 9.62e-11 | 65.5 |
MS.gene20752.t1 | AT1G76320 | 27.778 | 144 | 100 | 3 | 260 | 403 | 405 | 544 | 9.89e-11 | 65.5 |
MS.gene20752.t1 | AT1G76320 | 27.778 | 144 | 100 | 3 | 260 | 403 | 405 | 544 | 9.89e-11 | 65.5 |
Find 103 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATGACTGGTTCCCATTAT+TGG | 0.117147 | 1.2:+66034108 | None:intergenic |
AAAGATTTGTATAACTATTT+TGG | 0.141248 | 1.2:-66035312 | MS.gene20752:CDS |
AAAGTATTCTAAACTAAAAT+TGG | 0.188480 | 1.2:-66033947 | MS.gene20752:CDS |
TGATGTAATGGATGATATTT+TGG | 0.190992 | 1.2:-66033980 | MS.gene20752:CDS |
ACTCTCCATCTCAAGCTTTC+TGG | 0.209501 | 1.2:+66035531 | None:intergenic |
TGGTGATTACAATGAGAATT+TGG | 0.226630 | 1.2:-66035865 | MS.gene20752:CDS |
GATATTATGAATCTTGATTT+TGG | 0.243439 | 1.2:-66035789 | MS.gene20752:CDS |
TATCAAAACATGTCATATAA+TGG | 0.255086 | 1.2:-66035385 | MS.gene20752:CDS |
TACATTTATTTCCTGCATAT+CGG | 0.267468 | 1.2:-66035458 | MS.gene20752:CDS |
GAATGCTAAGATTCCAATAA+TGG | 0.282353 | 1.2:-66034121 | MS.gene20752:CDS |
TTTGATGAGGATGGAGATAA+TGG | 0.283559 | 1.2:-66035945 | MS.gene20752:CDS |
AAAGCACCGGTTTCGTTGTT+AGG | 0.291848 | 1.2:-66035725 | MS.gene20752:CDS |
ATCAAAACATGTCATATAAT+GGG | 0.301079 | 1.2:-66035384 | MS.gene20752:CDS |
TTGCTTCTCTAAGCTATCTT+CGG | 0.321466 | 1.2:-66035251 | MS.gene20752:CDS |
ACATTTATTTCCTGCATATC+GGG | 0.352320 | 1.2:-66035457 | MS.gene20752:CDS |
GGCGAGCTGGACAATTATTC+CGG | 0.353940 | 1.2:+66035571 | None:intergenic |
TTCTGTTAATCTTGATCTTA+CGG | 0.373575 | 1.2:+66033548 | None:intergenic |
TGCTTCTCTAAGCTATCTTC+GGG | 0.374894 | 1.2:-66035250 | MS.gene20752:CDS |
AATGCAGTTAACCATCCTAT+TGG | 0.378186 | 1.2:-66033365 | MS.gene20752:CDS |
TTGGATTCTTGTGTAATAGA+TGG | 0.384545 | 1.2:-66035846 | MS.gene20752:CDS |
CATATTCAGCAGCATGTGAT+AGG | 0.389828 | 1.2:-66034041 | MS.gene20752:CDS |
TCTGATCCGGTGTTGATAAC+TGG | 0.398541 | 1.2:-66034465 | MS.gene20752:CDS |
ACAGTGTCTAAACCTCTTCA+TGG | 0.409388 | 1.2:+66033828 | None:intergenic |
AATGCTAAGATTCCAATAAT+GGG | 0.412224 | 1.2:-66034120 | MS.gene20752:CDS |
TGCAAAGTTGCAGCTGAAAG+TGG | 0.416677 | 1.2:-66034015 | MS.gene20752:CDS |
AACACTTGACTAGGGTCAAT+AGG | 0.418818 | 1.2:-66035617 | MS.gene20752:CDS |
TCAGAAGGGAACAGACATAT+TGG | 0.427242 | 1.2:-66033901 | MS.gene20752:CDS |
CTGGTGCTAACCACAATGTT+AGG | 0.437522 | 1.2:-66033795 | MS.gene20752:CDS |
ATCTTTCCTAACAACGAAAC+CGG | 0.440915 | 1.2:+66035719 | None:intergenic |
TTCGTCAATCCCCGATATGC+AGG | 0.441670 | 1.2:+66035447 | None:intergenic |
AAAGTGTACCGCAGCAAAGT+TGG | 0.448110 | 1.2:-66035696 | MS.gene20752:CDS |
CCCGATGTTATACGATCTAA+AGG | 0.458963 | 1.2:-66033874 | MS.gene20752:CDS |
GGGGTACATGGTGGCAAACA+AGG | 0.461825 | 1.2:-66035364 | MS.gene20752:CDS |
CTCAGATGTATAAATCTTTG+CGG | 0.462602 | 1.2:+66034419 | None:intergenic |
AAGTGTACCGCAGCAAAGTT+GGG | 0.465894 | 1.2:-66035695 | MS.gene20752:CDS |
TCTAGAGACCGCGATGTCTC+TGG | 0.466922 | 1.2:-66035885 | MS.gene20752:CDS |
TCCGGTGTTGATAACTGGTC+TGG | 0.467260 | 1.2:-66034460 | MS.gene20752:CDS |
ATCCATTCCATTCCCATGAC+TGG | 0.470611 | 1.2:+66034095 | None:intergenic |
AAGTATTCTAAACTAAAATT+GGG | 0.472379 | 1.2:-66033946 | MS.gene20752:CDS |
CCAATAATGGGAACCAGTCA+TGG | 0.474453 | 1.2:-66034108 | MS.gene20752:CDS |
CAAGCAGTTTGATATTGAAA+AGG | 0.474683 | 1.2:-66034152 | MS.gene20752:CDS |
GCGAGCTGGACAATTATTCC+GGG | 0.478461 | 1.2:+66035572 | None:intergenic |
TAAGAGTAATACCTCTGATC+CGG | 0.486946 | 1.2:-66034478 | MS.gene20752:CDS |
AGACACTGTTCAAATTGTAC+TGG | 0.491511 | 1.2:-66033814 | MS.gene20752:CDS |
TTGATGAGGATGGAGATAAT+GGG | 0.498718 | 1.2:-66035944 | MS.gene20752:CDS |
TCCATCGACACCATTACGCT+TGG | 0.509287 | 1.2:+66033765 | None:intergenic |
ATGGGTATTGATATTAAAGA+TGG | 0.513994 | 1.2:-66035282 | MS.gene20752:CDS |
CCGATGTTATACGATCTAAA+GGG | 0.516186 | 1.2:-66033873 | MS.gene20752:CDS |
TAACGTATACGAAGGCGAGC+TGG | 0.516616 | 1.2:+66035558 | None:intergenic |
CCTTTAGATCGTATAACATC+GGG | 0.520619 | 1.2:+66033874 | None:intergenic |
CTAATATGATAGAGCTTGCT+CGG | 0.521561 | 1.2:-66034071 | MS.gene20752:CDS |
GCAAAGTTGCAGCTGAAAGT+GGG | 0.522215 | 1.2:-66034014 | MS.gene20752:CDS |
ATGTGTGGTCAAAGTTATGC+AGG | 0.527030 | 1.2:+66034538 | None:intergenic |
CTGGACAATTATTCCGGGTG+AGG | 0.532213 | 1.2:+66035577 | None:intergenic |
TAGAACAAAGAAATGTCTAA+AGG | 0.532630 | 1.2:-66033594 | MS.gene20752:CDS |
ATTCTTGTGTAATAGATGGT+AGG | 0.533148 | 1.2:-66035842 | MS.gene20752:CDS |
GCAGTTTGATATTGAAAAGG+TGG | 0.534190 | 1.2:-66034149 | MS.gene20752:CDS |
TTCTATACTCTCTCAATGTG+TGG | 0.535446 | 1.2:+66034523 | None:intergenic |
CATAATATCATCCGCCGTCA+TGG | 0.536322 | 1.2:+66035803 | None:intergenic |
GTTAATTGTTCATGACCAAC+TGG | 0.545431 | 1.2:-66034355 | MS.gene20752:CDS |
GGCGATTTAAACAACATCCA+TGG | 0.546504 | 1.2:-66033573 | MS.gene20752:CDS |
CCCAAGCGTAATGGTGTCGA+TGG | 0.547288 | 1.2:-66033766 | MS.gene20752:CDS |
ATGGGAACCAGTCATGGGAA+TGG | 0.547754 | 1.2:-66034102 | MS.gene20752:CDS |
ATGTCATATAATGGGGTACA+TGG | 0.556484 | 1.2:-66035376 | MS.gene20752:CDS |
GTCAAGACACAAAATTCAGA+AGG | 0.556614 | 1.2:-66033916 | MS.gene20752:CDS |
CCATCGACACCATTACGCTT+GGG | 0.563477 | 1.2:+66033766 | None:intergenic |
AGGACATGTCCCAAGCGTAA+TGG | 0.564262 | 1.2:-66033775 | MS.gene20752:CDS |
ACTTATCTTCAACATCCAGT+TGG | 0.564933 | 1.2:+66034340 | None:intergenic |
TGGACAATTATTCCGGGTGA+GGG | 0.565731 | 1.2:+66035578 | None:intergenic |
GAGAACATAGACCCCTCACC+CGG | 0.567472 | 1.2:-66035590 | MS.gene20752:CDS |
AGATCAAGATTAACAGAACA+TGG | 0.572591 | 1.2:-66033543 | MS.gene20752:CDS |
CCCTTTAGATCGTATAACAT+CGG | 0.573562 | 1.2:+66033873 | None:intergenic |
AACCAGTCATGGGAATGGAA+TGG | 0.579805 | 1.2:-66034097 | MS.gene20752:CDS |
CAATAATGGGAACCAGTCAT+GGG | 0.581291 | 1.2:-66034107 | MS.gene20752:CDS |
CAAGATTAACAGAACATGGA+AGG | 0.582220 | 1.2:-66033539 | MS.gene20752:CDS |
CATTTATTTCCTGCATATCG+GGG | 0.582815 | 1.2:-66035456 | MS.gene20752:CDS |
ATCTTGATCTTACGGAACCA+TGG | 0.586359 | 1.2:+66033556 | None:intergenic |
GGGTACATGGTGGCAAACAA+GGG | 0.589509 | 1.2:-66035363 | MS.gene20752:CDS |
TGTTAAGATTAATACCATGA+CGG | 0.594275 | 1.2:-66035817 | MS.gene20752:CDS |
CAAAGTTGCAGCTGAAAGTG+GGG | 0.602434 | 1.2:-66034013 | MS.gene20752:CDS |
GTTGACAGTATGCAATCGTA+CGG | 0.607441 | 1.2:-66035408 | MS.gene20752:CDS |
TACATGGTGGCAAACAAGGG+TGG | 0.611316 | 1.2:-66035360 | MS.gene20752:CDS |
CTTCTCTAAGCTATCTTCGG+GGG | 0.613173 | 1.2:-66035248 | MS.gene20752:CDS |
AGTTATCAACACCGGATCAG+AGG | 0.615238 | 1.2:+66034467 | None:intergenic |
CGATGTTATACGATCTAAAG+GGG | 0.619205 | 1.2:-66033872 | MS.gene20752:CDS |
TGTAGATTGTTTGAGTCTCG+CGG | 0.625379 | 1.2:-66034231 | MS.gene20752:CDS |
CTGGATTATAACGTATACGA+AGG | 0.628678 | 1.2:+66035550 | None:intergenic |
TCCAGACCAGTTATCAACAC+CGG | 0.632781 | 1.2:+66034459 | None:intergenic |
TGGGACATGTCCTAACATTG+TGG | 0.635268 | 1.2:+66033785 | None:intergenic |
ATAATCCAGAAAGCTTGAGA+TGG | 0.638128 | 1.2:-66035536 | MS.gene20752:CDS |
GCTTCTCTAAGCTATCTTCG+GGG | 0.639112 | 1.2:-66035249 | MS.gene20752:CDS |
AGAAAGCTTGAGATGGAGAG+TGG | 0.639417 | 1.2:-66035529 | MS.gene20752:CDS |
AAGGGTGGATATGATGCTGT+TGG | 0.642784 | 1.2:-66035345 | MS.gene20752:CDS |
GGACAATTATTCCGGGTGAG+GGG | 0.643647 | 1.2:+66035579 | None:intergenic |
TATTCTAAACTAAAATTGGG+AGG | 0.648453 | 1.2:-66033943 | MS.gene20752:CDS |
TCAAAACATGTCATATAATG+GGG | 0.649125 | 1.2:-66035383 | MS.gene20752:CDS |
ATCGCAAATCGACAGTGATG+AGG | 0.651172 | 1.2:-66033743 | MS.gene20752:CDS |
TCATATAATGGGGTACATGG+TGG | 0.662255 | 1.2:-66035373 | MS.gene20752:CDS |
TTTGTTTCCCAACTTTGCTG+CGG | 0.666357 | 1.2:+66035688 | None:intergenic |
ATGATAGAGCTTGCTCGGTG+TGG | 0.668531 | 1.2:-66034066 | MS.gene20752:CDS |
TCAAGACACAAAATTCAGAA+GGG | 0.677191 | 1.2:-66033915 | MS.gene20752:CDS |
TAAGATTAATACCATGACGG+CGG | 0.698475 | 1.2:-66035814 | MS.gene20752:CDS |
TGTAATCACCAGAGACATCG+CGG | 0.712710 | 1.2:+66035877 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAATGTATATATTTTGA+TGG | + | chr1.2:66033859-66033878 | None:intergenic | 10.0% |
!!! | ATAAATGTATATATTTTGAT+GGG | + | chr1.2:66033858-66033877 | None:intergenic | 10.0% |
!!! | TATTTATTTTTTTTTGTATG+TGG | + | chr1.2:66034238-66034257 | None:intergenic | 10.0% |
!! | AAGTATTCTAAACTAAAATT+GGG | - | chr1.2:66035381-66035400 | MS.gene20752:CDS | 15.0% |
!! | ATGATGATTCATTAAAAAAA+AGG | + | chr1.2:66035700-66035719 | None:intergenic | 15.0% |
!! | TTATATGTAAAATATGAGAA+GGG | - | chr1.2:66034123-66034142 | MS.gene20752:CDS | 15.0% |
!!! | AAAATTGAAAAGATTGTTTT+GGG | - | chr1.2:66034155-66034174 | MS.gene20752:CDS | 15.0% |
!!! | AAAGATTTGTATAACTATTT+TGG | - | chr1.2:66034015-66034034 | MS.gene20752:CDS | 15.0% |
!!! | AAAGTATTCTAAACTAAAAT+TGG | - | chr1.2:66035380-66035399 | MS.gene20752:CDS | 15.0% |
!!! | TAAATGTATATATTTTGATG+GGG | + | chr1.2:66033857-66033876 | None:intergenic | 15.0% |
!!! | TAAATTACTATAGACAATTT+TGG | + | chr1.2:66035869-66035888 | None:intergenic | 15.0% |
!!! | TCATATTTTACATATAACAT+AGG | + | chr1.2:66034120-66034139 | None:intergenic | 15.0% |
!!! | TTTTAGTTTAGAATACTTTT+CGG | + | chr1.2:66035379-66035398 | None:intergenic | 15.0% |
!! | AAATAAATACAATCTTCCTT+TGG | - | chr1.2:66034249-66034268 | MS.gene20752:CDS | 20.0% |
!! | ACAAAAATAATATGAGAACA+TGG | + | chr1.2:66035126-66035145 | None:intergenic | 20.0% |
!! | ACATTCTGTAAAAACATAAA+AGG | + | chr1.2:66035893-66035912 | None:intergenic | 20.0% |
!! | ATCAAAACATGTCATATAAT+GGG | - | chr1.2:66033943-66033962 | MS.gene20752:CDS | 20.0% |
!! | GTTATATGTAAAATATGAGA+AGG | - | chr1.2:66034122-66034141 | MS.gene20752:CDS | 20.0% |
!! | TATCAAAACATGTCATATAA+TGG | - | chr1.2:66033942-66033961 | MS.gene20752:CDS | 20.0% |
!!! | ATTCACAAACGATTATTTTT+GGG | - | chr1.2:66034296-66034315 | MS.gene20752:CDS | 20.0% |
!!! | GAAAATTGAAAAGATTGTTT+TGG | - | chr1.2:66034154-66034173 | MS.gene20752:CDS | 20.0% |
!!! | GATATTATGAATCTTGATTT+TGG | - | chr1.2:66033538-66033557 | MS.gene20752:CDS | 20.0% |
!!! | TCAAATTGTTTTTGTAAATC+TGG | - | chr1.2:66035667-66035686 | MS.gene20752:CDS | 20.0% |
!!! | TTCTGATTTTAATTTTGATG+AGG | - | chr1.2:66033369-66033388 | MS.gene20752:CDS | 20.0% |
!!! | TTTTGCATACTTTTGATAAA+AGG | + | chr1.2:66033584-66033603 | None:intergenic | 20.0% |
! | AAACAATAGAGACATATACA+TGG | - | chr1.2:66034338-66034357 | MS.gene20752:CDS | 25.0% |
! | AACAATAGAGACATATACAT+GGG | - | chr1.2:66034339-66034358 | MS.gene20752:CDS | 25.0% |
! | AATGCTAAGATTCCAATAAT+GGG | - | chr1.2:66035207-66035226 | MS.gene20752:intron | 25.0% |
! | ATACGAGAACAAGAAATTAT+GGG | - | chr1.2:66034651-66034670 | MS.gene20752:intron | 25.0% |
! | CAAAAATAATCGTTTGTGAA+TGG | + | chr1.2:66034297-66034316 | None:intergenic | 25.0% |
! | TACATTTATTTCCTGCATAT+CGG | - | chr1.2:66033869-66033888 | MS.gene20752:CDS | 25.0% |
! | TAGAACAAAGAAATGTCTAA+AGG | - | chr1.2:66035733-66035752 | MS.gene20752:CDS | 25.0% |
! | TATTCTAAACTAAAATTGGG+AGG | - | chr1.2:66035384-66035403 | MS.gene20752:CDS | 25.0% |
! | TCAAAACATGTCATATAATG+GGG | - | chr1.2:66033944-66033963 | MS.gene20752:CDS | 25.0% |
! | TGTTAAGATTAATACCATGA+CGG | - | chr1.2:66033510-66033529 | MS.gene20752:intron | 25.0% |
! | TTCTGTTAATCTTGATCTTA+CGG | + | chr1.2:66035782-66035801 | None:intergenic | 25.0% |
!! | AATTCATTTCTAGAAGCAAT+GGG | - | chr1.2:66034367-66034386 | MS.gene20752:CDS | 25.0% |
!! | ATGGAAAAAGTTTTCTTCTT+TGG | + | chr1.2:66035483-66035502 | None:intergenic | 25.0% |
!! | CAATCTTTTCAATTTTCCAT+TGG | + | chr1.2:66034151-66034170 | None:intergenic | 25.0% |
!! | CATTCACAAACGATTATTTT+TGG | - | chr1.2:66034295-66034314 | MS.gene20752:CDS | 25.0% |
!! | TTTTCAATATCAAACTGCTT+GGG | + | chr1.2:66035176-66035195 | None:intergenic | 25.0% |
!!! | AAATTTGTTTTCCAATAGGA+TGG | + | chr1.2:66035976-66035995 | None:intergenic | 25.0% |
!!! | AACAATCACATAAGTTGATA+AGG | + | chr1.2:66035841-66035860 | None:intergenic | 25.0% |
!!! | AACTATTTTGGCAAGAAAAT+GGG | - | chr1.2:66034027-66034046 | MS.gene20752:CDS | 25.0% |
!!! | ATGGGTATTGATATTAAAGA+TGG | - | chr1.2:66034045-66034064 | MS.gene20752:CDS | 25.0% |
!!! | ATGTTTTTACAGAATGTGAA+GGG | - | chr1.2:66035896-66035915 | MS.gene20752:CDS | 25.0% |
!!! | CGAAATGATTTTTTGTGTTA+TGG | - | chr1.2:66034192-66034211 | MS.gene20752:CDS | 25.0% |
!!! | GATTTTAATTTTGATGAGGA+TGG | - | chr1.2:66033373-66033392 | MS.gene20752:CDS | 25.0% |
!!! | TAACTATTTTGGCAAGAAAA+TGG | - | chr1.2:66034026-66034045 | MS.gene20752:CDS | 25.0% |
!!! | TACTTTCGAGATAAGTTTTT+TGG | - | chr1.2:66034682-66034701 | MS.gene20752:intron | 25.0% |
!!! | TATGTTTTTACAGAATGTGA+AGG | - | chr1.2:66035895-66035914 | MS.gene20752:CDS | 25.0% |
!!! | TGATGTAATGGATGATATTT+TGG | - | chr1.2:66035347-66035366 | MS.gene20752:CDS | 25.0% |
!!! | TTCACAAACGATTATTTTTG+GGG | - | chr1.2:66034297-66034316 | MS.gene20752:CDS | 25.0% |
AAAACTCTTCAAATTCCTCT+GGG | + | chr1.2:66034576-66034595 | None:intergenic | 30.0% | |
AAGCAAAAAACACTTGACTA+GGG | - | chr1.2:66033702-66033721 | MS.gene20752:CDS | 30.0% | |
ACATTTATTTCCTGCATATC+GGG | - | chr1.2:66033870-66033889 | MS.gene20752:CDS | 30.0% | |
AGATCAAGATTAACAGAACA+TGG | - | chr1.2:66035784-66035803 | MS.gene20752:CDS | 30.0% | |
ATTCTTGTGTAATAGATGGT+AGG | - | chr1.2:66033485-66033504 | MS.gene20752:intron | 30.0% | |
CAACGAAAAATATCGAAAAG+AGG | - | chr1.2:66035035-66035054 | MS.gene20752:intron | 30.0% | |
CAAGCAGTTTGATATTGAAA+AGG | - | chr1.2:66035175-66035194 | MS.gene20752:intron | 30.0% | |
CAGTTTGTGTGCAATAAAAA+TGG | - | chr1.2:66033673-66033692 | MS.gene20752:intron | 30.0% | |
CATACGAGAACAAGAAATTA+TGG | - | chr1.2:66034650-66034669 | MS.gene20752:intron | 30.0% | |
CTCAGATGTATAAATCTTTG+CGG | + | chr1.2:66034911-66034930 | None:intergenic | 30.0% | |
GAATGCTAAGATTCCAATAA+TGG | - | chr1.2:66035206-66035225 | MS.gene20752:intron | 30.0% | |
TCAAGACACAAAATTCAGAA+GGG | - | chr1.2:66035412-66035431 | MS.gene20752:CDS | 30.0% | |
TGGTGATTACAATGAGAATT+TGG | - | chr1.2:66033462-66033481 | MS.gene20752:intron | 30.0% | |
TTGGATTCTTGTGTAATAGA+TGG | - | chr1.2:66033481-66033500 | MS.gene20752:intron | 30.0% | |
TTTCAAGAAAGCAATGTACT+CGG | - | chr1.2:66034543-66034562 | MS.gene20752:CDS | 30.0% | |
! | AAACTTATCTCGAAAGTATG+CGG | + | chr1.2:66034680-66034699 | None:intergenic | 30.0% |
! | AGAGGAATTTGAAGAGTTTT+GGG | - | chr1.2:66034576-66034595 | MS.gene20752:intron | 30.0% |
! | CTTTTCAATATCAAACTGCT+TGG | + | chr1.2:66035177-66035196 | None:intergenic | 30.0% |
! | GAATTCATTTCTAGAAGCAA+TGG | - | chr1.2:66034366-66034385 | MS.gene20752:CDS | 30.0% |
! | TTTCTTGTTCTCGTATGTTT+TGG | + | chr1.2:66034647-66034666 | None:intergenic | 30.0% |
!! | AGAAAACTTTTTCCATGAAG+AGG | - | chr1.2:66035487-66035506 | MS.gene20752:CDS | 30.0% |
!!! | ATAAGTTTTTTGGTCGCATA+CGG | - | chr1.2:66034692-66034711 | MS.gene20752:intron | 30.0% |
!!! | GGCATGTTTTAATGATGTAA+TGG | - | chr1.2:66035335-66035354 | MS.gene20752:CDS | 30.0% |
AAACTCTTCAAATTCCTCTG+GGG | + | chr1.2:66034575-66034594 | None:intergenic | 35.0% | |
AATGCAGTTAACCATCCTAT+TGG | - | chr1.2:66035962-66035981 | MS.gene20752:CDS | 35.0% | |
ACACAGTCTATGAAATGCTT+CGG | + | chr1.2:66034464-66034483 | None:intergenic | 35.0% | |
ACTTATCTTCAACATCCAGT+TGG | + | chr1.2:66034990-66035009 | None:intergenic | 35.0% | |
AGACACTGTTCAAATTGTAC+TGG | - | chr1.2:66035513-66035532 | MS.gene20752:CDS | 35.0% | |
ATAATCCAGAAAGCTTGAGA+TGG | - | chr1.2:66033791-66033810 | MS.gene20752:CDS | 35.0% | |
ATCTTTCCTAACAACGAAAC+CGG | + | chr1.2:66033611-66033630 | None:intergenic | 35.0% | |
CAAAACTCTTCAAATTCCTC+TGG | + | chr1.2:66034577-66034596 | None:intergenic | 35.0% | |
CAAGATTAACAGAACATGGA+AGG | - | chr1.2:66035788-66035807 | MS.gene20752:CDS | 35.0% | |
CATTTATTTCCTGCATATCG+GGG | - | chr1.2:66033871-66033890 | MS.gene20752:CDS | 35.0% | |
CCCTTTAGATCGTATAACAT+CGG | + | chr1.2:66035457-66035476 | None:intergenic | 35.0% | |
CCGATGTTATACGATCTAAA+GGG | - | chr1.2:66035454-66035473 | MS.gene20752:CDS | 35.0% | |
CCTTTAGATCGTATAACATC+GGG | + | chr1.2:66035456-66035475 | None:intergenic | 35.0% | |
CGATGTTATACGATCTAAAG+GGG | - | chr1.2:66035455-66035474 | MS.gene20752:CDS | 35.0% | |
CTGGATTATAACGTATACGA+AGG | + | chr1.2:66033780-66033799 | None:intergenic | 35.0% | |
GAAGCAAAAAACACTTGACT+AGG | - | chr1.2:66033701-66033720 | MS.gene20752:CDS | 35.0% | |
GCAGTTTGATATTGAAAAGG+TGG | - | chr1.2:66035178-66035197 | MS.gene20752:intron | 35.0% | |
GTCAAGACACAAAATTCAGA+AGG | - | chr1.2:66035411-66035430 | MS.gene20752:CDS | 35.0% | |
GTTAATTGTTCATGACCAAC+TGG | - | chr1.2:66034972-66034991 | MS.gene20752:intron | 35.0% | |
TAAGAGTAATACCTCTGATC+CGG | - | chr1.2:66034849-66034868 | MS.gene20752:intron | 35.0% | |
TAAGATTAATACCATGACGG+CGG | - | chr1.2:66033513-66033532 | MS.gene20752:intron | 35.0% | |
TGAGCTACAAGGTAACAATT+GGG | - | chr1.2:66034618-66034637 | MS.gene20752:intron | 35.0% | |
TTCTATACTCTCTCAATGTG+TGG | + | chr1.2:66034807-66034826 | None:intergenic | 35.0% | |
TTGATGAGGATGGAGATAAT+GGG | - | chr1.2:66033383-66033402 | MS.gene20752:CDS | 35.0% | |
TTGCTTCTCTAAGCTATCTT+CGG | - | chr1.2:66034076-66034095 | MS.gene20752:CDS | 35.0% | |
TTTGATGAGGATGGAGATAA+TGG | - | chr1.2:66033382-66033401 | MS.gene20752:CDS | 35.0% | |
! | ATGTCATATAATGGGGTACA+TGG | - | chr1.2:66033951-66033970 | MS.gene20752:CDS | 35.0% |
! | CAAAAGTATGCAAAAAGCAC+CGG | - | chr1.2:66033589-66033608 | MS.gene20752:CDS | 35.0% |
! | CAGAGGAATTTGAAGAGTTT+TGG | - | chr1.2:66034575-66034594 | MS.gene20752:intron | 35.0% |
! | CTAATATGATAGAGCTTGCT+CGG | - | chr1.2:66035256-66035275 | MS.gene20752:CDS | 35.0% |
! | CTTCCTTTGGTAATATTCTC+TGG | - | chr1.2:66034262-66034281 | MS.gene20752:CDS | 35.0% |
! | GGAGAGTGGTAATTTTTGAA+GGG | - | chr1.2:66033812-66033831 | MS.gene20752:CDS | 35.0% |
! | TCTTTTGTCTTCTTCTGCTT+CGG | + | chr1.2:66035938-66035957 | None:intergenic | 35.0% |
! | TGGAGAGTGGTAATTTTTGA+AGG | - | chr1.2:66033811-66033830 | MS.gene20752:CDS | 35.0% |
!! | AAATATGAGAAGGGTACCAA+TGG | - | chr1.2:66034132-66034151 | MS.gene20752:CDS | 35.0% |
!!! | AAAAGATTGTTTTGGGCAGA+TGG | - | chr1.2:66034162-66034181 | MS.gene20752:CDS | 35.0% |
!!! | ATTTTGATGGGGTTAGTTCA+TGG | + | chr1.2:66033846-66033865 | None:intergenic | 35.0% |
AACACTTGACTAGGGTCAAT+AGG | - | chr1.2:66033710-66033729 | MS.gene20752:CDS | 40.0% | |
ACAACCAAAAGCAGTAGTGA+CGG | - | chr1.2:66034396-66034415 | MS.gene20752:CDS | 40.0% | |
ACAGTGTCTAAACCTCTTCA+TGG | + | chr1.2:66035502-66035521 | None:intergenic | 40.0% | |
ATCTTGATCTTACGGAACCA+TGG | + | chr1.2:66035774-66035793 | None:intergenic | 40.0% | |
ATGTGTGGTCAAAGTTATGC+AGG | + | chr1.2:66034792-66034811 | None:intergenic | 40.0% | |
ATTGATTGCTTCACACTGAG+AGG | + | chr1.2:66034722-66034741 | None:intergenic | 40.0% | |
CACAGTCTATGAAATGCTTC+GGG | + | chr1.2:66034463-66034482 | None:intergenic | 40.0% | |
CAGCCAGAGAATATTACCAA+AGG | + | chr1.2:66034268-66034287 | None:intergenic | 40.0% | |
CATATTCAGCAGCATGTGAT+AGG | - | chr1.2:66035286-66035305 | MS.gene20752:CDS | 40.0% | |
CCCGATGTTATACGATCTAA+AGG | - | chr1.2:66035453-66035472 | MS.gene20752:CDS | 40.0% | |
GGCGATTTAAACAACATCCA+TGG | - | chr1.2:66035754-66035773 | MS.gene20752:CDS | 40.0% | |
GTGAGCTACAAGGTAACAAT+TGG | - | chr1.2:66034617-66034636 | MS.gene20752:intron | 40.0% | |
GTTGACAGTATGCAATCGTA+CGG | - | chr1.2:66033919-66033938 | MS.gene20752:CDS | 40.0% | |
TCAGAAGGGAACAGACATAT+TGG | - | chr1.2:66035426-66035445 | MS.gene20752:CDS | 40.0% | |
TGCTTCTCTAAGCTATCTTC+GGG | - | chr1.2:66034077-66034096 | MS.gene20752:CDS | 40.0% | |
TGTAGATTGTTTGAGTCTCG+CGG | - | chr1.2:66035096-66035115 | MS.gene20752:intron | 40.0% | |
TTTGTTTCCCAACTTTGCTG+CGG | + | chr1.2:66033642-66033661 | None:intergenic | 40.0% | |
! | CAATAATGGGAACCAGTCAT+GGG | - | chr1.2:66035220-66035239 | MS.gene20752:intron | 40.0% |
! | CTTTTGTCTTCTTCTGCTTC+GGG | + | chr1.2:66035937-66035956 | None:intergenic | 40.0% |
! | TCATATAATGGGGTACATGG+TGG | - | chr1.2:66033954-66033973 | MS.gene20752:CDS | 40.0% |
!!! | GATTATTTTTGGGGCTGCTT+TGG | - | chr1.2:66034306-66034325 | MS.gene20752:CDS | 40.0% |
AAAGTGTACCGCAGCAAAGT+TGG | - | chr1.2:66033631-66033650 | MS.gene20752:intron | 45.0% | |
AACCAGTCATGGGAATGGAA+TGG | - | chr1.2:66035230-66035249 | MS.gene20752:CDS | 45.0% | |
AAGGGTGGATATGATGCTGT+TGG | - | chr1.2:66033982-66034001 | MS.gene20752:CDS | 45.0% | |
AAGTGTACCGCAGCAAAGTT+GGG | - | chr1.2:66033632-66033651 | MS.gene20752:intron | 45.0% | |
ACTCTCCATCTCAAGCTTTC+TGG | + | chr1.2:66033799-66033818 | None:intergenic | 45.0% | |
AGAAAGCTTGAGATGGAGAG+TGG | - | chr1.2:66033798-66033817 | MS.gene20752:CDS | 45.0% | |
AGCATTCTTGTGCAAATGCC+AGG | + | chr1.2:66034488-66034507 | None:intergenic | 45.0% | |
AGTTATCAACACCGGATCAG+AGG | + | chr1.2:66034863-66034882 | None:intergenic | 45.0% | |
ATCCATTCCATTCCCATGAC+TGG | + | chr1.2:66035235-66035254 | None:intergenic | 45.0% | |
ATCGCAAATCGACAGTGATG+AGG | - | chr1.2:66035584-66035603 | MS.gene20752:CDS | 45.0% | |
CAAAGTTGCAGCTGAAAGTG+GGG | - | chr1.2:66035314-66035333 | MS.gene20752:CDS | 45.0% | |
CATAATATCATCCGCCGTCA+TGG | + | chr1.2:66033527-66033546 | None:intergenic | 45.0% | |
CATTTCATAGACTGTGTGCC+TGG | - | chr1.2:66034467-66034486 | MS.gene20752:CDS | 45.0% | |
CTTCTCTAAGCTATCTTCGG+GGG | - | chr1.2:66034079-66034098 | MS.gene20752:CDS | 45.0% | |
GCAAAGTTGCAGCTGAAAGT+GGG | - | chr1.2:66035313-66035332 | MS.gene20752:CDS | 45.0% | |
GCTTCTCTAAGCTATCTTCG+GGG | - | chr1.2:66034078-66034097 | MS.gene20752:CDS | 45.0% | |
GGATGGTGACATGTCTATGA+GGG | - | chr1.2:66034417-66034436 | MS.gene20752:CDS | 45.0% | |
GTTGAGATGAGTGAGCTACA+AGG | - | chr1.2:66034607-66034626 | MS.gene20752:intron | 45.0% | |
TCCAGACCAGTTATCAACAC+CGG | + | chr1.2:66034871-66034890 | None:intergenic | 45.0% | |
TGCAAAGTTGCAGCTGAAAG+TGG | - | chr1.2:66035312-66035331 | MS.gene20752:CDS | 45.0% | |
TGGACAATTATTCCGGGTGA+GGG | + | chr1.2:66033752-66033771 | None:intergenic | 45.0% | |
TGGGACATGTCCTAACATTG+TGG | + | chr1.2:66035545-66035564 | None:intergenic | 45.0% | |
TGTAATCACCAGAGACATCG+CGG | + | chr1.2:66033453-66033472 | None:intergenic | 45.0% | |
! | CCAATAATGGGAACCAGTCA+TGG | - | chr1.2:66035219-66035238 | MS.gene20752:intron | 45.0% |
! | CCATGACTGGTTCCCATTAT+TGG | + | chr1.2:66035222-66035241 | None:intergenic | 45.0% |
! | CTGGTGCTAACCACAATGTT+AGG | - | chr1.2:66035532-66035551 | MS.gene20752:CDS | 45.0% |
!! | AAAGCACCGGTTTCGTTGTT+AGG | - | chr1.2:66033602-66033621 | MS.gene20752:intron | 45.0% |
!! | TCTGATCCGGTGTTGATAAC+TGG | - | chr1.2:66034862-66034881 | MS.gene20752:intron | 45.0% |
!!! | GATTGTTTTGGGCAGATGGA+TGG | - | chr1.2:66034166-66034185 | MS.gene20752:CDS | 45.0% |
AGGACATGTCCCAAGCGTAA+TGG | - | chr1.2:66035552-66035571 | MS.gene20752:CDS | 50.0% | |
ATGGGAACCAGTCATGGGAA+TGG | - | chr1.2:66035225-66035244 | MS.gene20752:intron | 50.0% | |
CCATCGACACCATTACGCTT+GGG | + | chr1.2:66035564-66035583 | None:intergenic | 50.0% | |
CGGATGGTGACATGTCTATG+AGG | - | chr1.2:66034416-66034435 | MS.gene20752:CDS | 50.0% | |
CTGGACAATTATTCCGGGTG+AGG | + | chr1.2:66033753-66033772 | None:intergenic | 50.0% | |
GCGAGCTGGACAATTATTCC+GGG | + | chr1.2:66033758-66033777 | None:intergenic | 50.0% | |
GGACAATTATTCCGGGTGAG+GGG | + | chr1.2:66033751-66033770 | None:intergenic | 50.0% | |
GGCGAGCTGGACAATTATTC+CGG | + | chr1.2:66033759-66033778 | None:intergenic | 50.0% | |
GGGTACATGGTGGCAAACAA+GGG | - | chr1.2:66033964-66033983 | MS.gene20752:CDS | 50.0% | |
TAACGTATACGAAGGCGAGC+TGG | + | chr1.2:66033772-66033791 | None:intergenic | 50.0% | |
TACATGGTGGCAAACAAGGG+TGG | - | chr1.2:66033967-66033986 | MS.gene20752:CDS | 50.0% | |
TCCATCGACACCATTACGCT+TGG | + | chr1.2:66035565-66035584 | None:intergenic | 50.0% | |
TCTAAGCTATCTTCGGGGGA+AGG | - | chr1.2:66034083-66034102 | MS.gene20752:CDS | 50.0% | |
TTCGTCAATCCCCGATATGC+AGG | + | chr1.2:66033883-66033902 | None:intergenic | 50.0% | |
! | ATGATAGAGCTTGCTCGGTG+TGG | - | chr1.2:66035261-66035280 | MS.gene20752:CDS | 50.0% |
! | CCAAAAGCAGTAGTGACGGA+TGG | - | chr1.2:66034400-66034419 | MS.gene20752:CDS | 50.0% |
! | CCATCCGTCACTACTGCTTT+TGG | + | chr1.2:66034403-66034422 | None:intergenic | 50.0% |
!! | TCCGGTGTTGATAACTGGTC+TGG | - | chr1.2:66034867-66034886 | MS.gene20752:intron | 50.0% |
AGCTATCTTCGGGGGAAGGA+AGG | - | chr1.2:66034087-66034106 | MS.gene20752:CDS | 55.0% | |
GAGAACATAGACCCCTCACC+CGG | - | chr1.2:66033737-66033756 | MS.gene20752:CDS | 55.0% | |
GGGGTACATGGTGGCAAACA+AGG | - | chr1.2:66033963-66033982 | MS.gene20752:CDS | 55.0% | |
GTACTCGGATTTCACCCCAG+AGG | - | chr1.2:66034558-66034577 | MS.gene20752:intron | 55.0% | |
TCTAGAGACCGCGATGTCTC+TGG | - | chr1.2:66033442-66033461 | MS.gene20752:intron | 55.0% | |
! | CCCAAGCGTAATGGTGTCGA+TGG | - | chr1.2:66035561-66035580 | MS.gene20752:CDS | 55.0% |
TCTTCGGGGGAAGGAAGGCT+TGG | - | chr1.2:66034092-66034111 | MS.gene20752:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 66033352 | 66035997 | 66033352 | ID=MS.gene20752 |
chr1.2 | mRNA | 66033352 | 66035997 | 66033352 | ID=MS.gene20752.t1;Parent=MS.gene20752 |
chr1.2 | exon | 66035228 | 66035997 | 66035228 | ID=MS.gene20752.t1.exon1;Parent=MS.gene20752.t1 |
chr1.2 | CDS | 66035228 | 66035997 | 66035228 | ID=cds.MS.gene20752.t1;Parent=MS.gene20752.t1 |
chr1.2 | exon | 66033696 | 66034572 | 66033696 | ID=MS.gene20752.t1.exon2;Parent=MS.gene20752.t1 |
chr1.2 | CDS | 66033696 | 66034572 | 66033696 | ID=cds.MS.gene20752.t1;Parent=MS.gene20752.t1 |
chr1.2 | exon | 66033527 | 66033613 | 66033527 | ID=MS.gene20752.t1.exon3;Parent=MS.gene20752.t1 |
chr1.2 | CDS | 66033527 | 66033613 | 66033527 | ID=cds.MS.gene20752.t1;Parent=MS.gene20752.t1 |
chr1.2 | exon | 66033352 | 66033441 | 66033352 | ID=MS.gene20752.t1.exon4;Parent=MS.gene20752.t1 |
chr1.2 | CDS | 66033352 | 66033441 | 66033352 | ID=cds.MS.gene20752.t1;Parent=MS.gene20752.t1 |
Gene Sequence |
Protein sequence |