AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20850.t1 MTR_1g087140 96.283 1103 36 4 7 1105 1 1102 0.0 2187
MS.gene20850.t1 MTR_1g090850 61.797 1102 347 20 10 1096 3 1045 0.0 1226
MS.gene20850.t1 MTR_8g075340 29.348 552 339 17 148 674 210 735 7.09e-43 171
MS.gene20850.t1 MTR_8g075340 31.156 199 112 7 912 1087 957 1153 2.48e-16 85.1
MS.gene20850.t1 MTR_5g022470 28.086 559 330 16 152 674 251 773 8.10e-42 167
MS.gene20850.t1 MTR_5g022470 33.793 145 72 4 966 1087 1040 1183 1.27e-15 82.8
MS.gene20850.t1 MTR_5g022470 28.393 560 327 16 152 674 251 773 1.07e-41 167
MS.gene20850.t1 MTR_8g019680 63.918 97 30 2 1002 1096 53 146 2.97e-35 132
MS.gene20850.t1 MTR_3g085130 28.475 446 253 17 272 678 102 520 5.37e-31 132
MS.gene20850.t1 MTR_3g085130 32.847 137 69 6 973 1097 693 818 1.03e-13 76.3
MS.gene20850.t1 MTR_8g080770 28.325 406 222 12 383 770 272 626 1.71e-30 130
MS.gene20850.t1 MTR_8g080770 31.884 138 70 6 973 1097 729 855 4.85e-13 74.3
MS.gene20850.t1 MTR_8g080770 28.079 406 223 12 383 770 381 735 3.11e-30 130
MS.gene20850.t1 MTR_8g080770 31.884 138 70 6 973 1097 838 964 4.20e-13 74.3
MS.gene20850.t1 MTR_3g085130 28.251 446 254 17 272 678 312 730 3.16e-30 130
MS.gene20850.t1 MTR_3g085130 32.099 162 84 8 948 1097 881 1028 1.12e-13 76.3
MS.gene20850.t1 MTR_5g097410 25.806 372 210 12 342 685 575 908 3.30e-23 107
MS.gene20850.t1 MTR_5g097410 32.667 150 63 7 976 1099 1074 1211 6.24e-12 70.9
MS.gene20850.t1 MTR_8g106150 27.078 373 216 10 351 684 97 452 2.42e-21 100
MS.gene20850.t1 MTR_8g106150 33.113 151 76 5 964 1097 606 748 1.81e-14 78.6
MS.gene20850.t1 MTR_8g106150 27.056 377 211 11 351 684 340 695 2.86e-21 100
MS.gene20850.t1 MTR_8g106150 33.113 151 76 5 964 1097 849 991 2.51e-14 78.6
MS.gene20850.t1 MTR_3g105590 29.464 336 180 14 367 669 335 646 8.19e-20 96.3
MS.gene20850.t1 MTR_4g031150 26.503 366 205 11 364 708 359 681 2.14e-18 91.3
MS.gene20850.t1 MTR_1g013360 25.753 365 204 12 399 713 381 728 6.88e-17 86.7
MS.gene20850.t1 MTR_7g109150 27.273 242 140 6 454 690 393 603 1.14e-15 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20850.t1 AT2G47430 37.805 1148 617 25 11 1101 12 1119 0.0 674
MS.gene20850.t1 AT2G17820 33.159 383 232 10 296 674 400 762 6.15e-44 174
MS.gene20850.t1 AT2G17820 30.769 208 105 7 918 1096 995 1192 3.12e-16 84.7
MS.gene20850.t1 AT1G27320 27.475 404 225 12 380 769 436 785 1.27e-30 131
MS.gene20850.t1 AT1G27320 28.571 154 76 5 973 1102 887 1030 3.04e-11 68.6
MS.gene20850.t1 AT2G01830 27.596 366 221 11 338 677 415 762 2.10e-28 124
MS.gene20850.t1 AT2G01830 36.296 135 68 4 973 1097 942 1068 1.80e-15 82.4
MS.gene20850.t1 AT2G01830 27.596 366 221 11 338 677 392 739 2.24e-28 124
MS.gene20850.t1 AT2G01830 36.765 136 66 5 973 1097 919 1045 2.18e-15 82.0
MS.gene20850.t1 AT2G01830 27.596 366 221 11 338 677 392 739 2.24e-28 124
MS.gene20850.t1 AT2G01830 36.765 136 66 5 973 1097 919 1045 2.18e-15 82.0
MS.gene20850.t1 AT2G01830 27.596 366 221 11 338 677 392 739 2.24e-28 124
MS.gene20850.t1 AT2G01830 36.765 136 66 5 973 1097 919 1045 2.18e-15 82.0
MS.gene20850.t1 AT2G01830 27.596 366 221 11 338 677 392 739 2.24e-28 124
MS.gene20850.t1 AT2G01830 36.765 136 66 5 973 1097 919 1045 2.18e-15 82.0
MS.gene20850.t1 AT2G01830 27.596 366 221 11 338 677 404 751 2.26e-28 124
MS.gene20850.t1 AT2G01830 36.765 136 66 5 973 1097 931 1057 2.14e-15 82.0
MS.gene20850.t1 AT5G35750 28.916 332 173 12 380 680 573 872 5.67e-25 113
MS.gene20850.t1 AT1G66340 28.481 316 175 10 378 686 323 594 5.06e-19 93.6
MS.gene20850.t1 AT5G10720 30.037 273 154 11 399 669 371 608 3.08e-18 91.3
MS.gene20850.t1 AT2G40940 25.538 325 185 9 364 676 309 588 1.97e-15 81.6

Find 200 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1.3:-61668200 MS.gene20850:CDS
TTGCTACCCCATTGATATTA+TGG 0.146001 1.3:-61672434 MS.gene20850:CDS
TGTGATCTTAATTCATTTCT+TGG 0.147327 1.3:+61668532 None:intergenic
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1.3:-61671449 MS.gene20850:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1.3:+61672855 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1.3:+61673381 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1.3:-61672829 MS.gene20850:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1.3:-61671402 MS.gene20850:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1.3:-61672553 MS.gene20850:CDS
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1.3:-61672613 MS.gene20850:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1.3:-61672644 MS.gene20850:CDS
TTCCTGAGTTTGGTGGTAAT+TGG 0.250834 1.3:-61668573 MS.gene20850:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1.3:+61671376 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1.3:+61670662 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1.3:-61672794 MS.gene20850:CDS
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1.3:+61671493 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1.3:-61671458 MS.gene20850:CDS
ATTAGTAACAACTAATTTAG+AGG 0.290279 1.3:+61671412 None:intergenic
TTCTTTCCACTTAATGGTTT+AGG 0.294905 1.3:+61668373 None:intergenic
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1.3:+61667911 None:intergenic
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1.3:-61671372 MS.gene20850:CDS
TGCTACCCCATTGATATTAT+GGG 0.314042 1.3:-61672433 MS.gene20850:CDS
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1.3:-61671704 MS.gene20850:CDS
ATTAGGCTTCTTCCTGAGTT+TGG 0.323273 1.3:-61668583 MS.gene20850:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1.3:-61673773 MS.gene20850:intron
ATGATTTACCTAGCAAATCT+TGG 0.341823 1.3:+61671318 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1.3:-61670887 MS.gene20850:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1.3:+61673382 None:intergenic
ATTCAAGCTGTTAATGGTAA+TGG 0.357123 1.3:-61672547 MS.gene20850:CDS
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1.3:-61668600 MS.gene20850:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1.3:+61668700 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1.3:-61668625 MS.gene20850:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1.3:-61670723 MS.gene20850:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1.3:-61669180 MS.gene20850:CDS
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1.3:+61667916 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1.3:+61671013 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1.3:-61669246 MS.gene20850:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1.3:-61672793 MS.gene20850:CDS
GTATTTGAAGTGGATGATAC+AGG 0.399459 1.3:-61670695 MS.gene20850:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1.3:-61668705 MS.gene20850:CDS
TAGACACACACTTTCATCAT+TGG 0.402470 1.3:+61668501 None:intergenic
TTCTATTCCCATAATATCAA+TGG 0.403961 1.3:+61672426 None:intergenic
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1.3:-61670596 MS.gene20850:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1.3:+61669135 None:intergenic
AACACTCTTGCGGTTAGTCT+TGG 0.417762 1.3:+61670817 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1.3:-61668924 MS.gene20850:CDS
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1.3:+61668754 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1.3:+61668613 None:intergenic
ACATTTCAATCAAACCAATA+AGG 0.422617 1.3:+61671435 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1.3:-61669048 MS.gene20850:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1.3:+61673428 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1.3:-61672631 MS.gene20850:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1.3:-61668307 MS.gene20850:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1.3:-61668191 MS.gene20850:intron
CCATAAGACATGGATCTTGT+TGG 0.432881 1.3:+61670723 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1.3:-61669047 MS.gene20850:CDS
CCACCATACTCAATGAATAC+TGG 0.434464 1.3:-61673820 None:intergenic
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1.3:-61668701 MS.gene20850:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1.3:+61671365 None:intergenic
TCTATTCCCATAATATCAAT+GGG 0.437409 1.3:+61672427 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.437547 1.3:-61670999 MS.gene20850:CDS
CATAAGACATGGATCTTGTT+GGG 0.439105 1.3:+61670724 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1.3:-61667956 MS.gene20850:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1.3:-61668872 MS.gene20850:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1.3:-61668865 MS.gene20850:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1.3:-61668938 MS.gene20850:CDS
CTATGTTAATCTGGGAAGAA+AGG 0.444430 1.3:-61668443 MS.gene20850:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1.3:-61671668 MS.gene20850:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1.3:+61669260 None:intergenic
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1.3:-61670608 MS.gene20850:CDS
TATCATCTTGATCAATTGCT+TGG 0.448900 1.3:+61668650 None:intergenic
GGAGACCAACTTAAAACAAA+TGG 0.449087 1.3:-61671351 MS.gene20850:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1.3:-61671669 MS.gene20850:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1.3:-61668778 MS.gene20850:CDS
ATGGTAATGGAGATCTAATA+AGG 0.458097 1.3:-61672534 MS.gene20850:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1.3:-61673590 MS.gene20850:intron
CTTTCTTCCCAGATTAACAT+AGG 0.460148 1.3:+61668444 None:intergenic
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1.3:+61668052 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1.3:+61670600 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1.3:-61670595 MS.gene20850:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1.3:-61670602 MS.gene20850:CDS
AGGCTTCTTCCTGAGTTTGG+TGG 0.470450 1.3:-61668580 MS.gene20850:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1.3:-61670614 MS.gene20850:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1.3:-61672715 MS.gene20850:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1.3:-61667869 None:intergenic
GTTGTATTGGACTCTTGTAA+TGG 0.481853 1.3:-61670986 MS.gene20850:CDS
TGATATTATGGGAATAGAAT+CGG 0.482331 1.3:-61672422 MS.gene20850:intron
GGAATTGTGGACAAGGAAGT+TGG 0.483910 1.3:-61669321 MS.gene20850:CDS
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1.3:+61669127 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1.3:-61670579 MS.gene20850:intron
TCCATTAAGATATAATCATA+AGG 0.487002 1.3:+61668199 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1.3:-61672730 MS.gene20850:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1.3:-61668379 MS.gene20850:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1.3:-61668053 MS.gene20850:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1.3:+61667924 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1.3:+61668673 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1.3:+61671319 None:intergenic
CGTTTGATGCATGGAGACAT+TGG 0.495528 1.3:-61669342 MS.gene20850:CDS
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1.3:-61670949 MS.gene20850:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1.3:+61673060 None:intergenic
TTGACACAAATCTCATACAT+AGG 0.498626 1.3:-61673024 MS.gene20850:CDS
CAAGTTAAAGAGAATTCTGT+TGG 0.500351 1.3:-61670623 MS.gene20850:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1.3:+61671462 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1.3:+61668590 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1.3:+61668219 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1.3:-61669351 MS.gene20850:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1.3:-61668326 MS.gene20850:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1.3:+61672892 None:intergenic
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1.3:+61672896 None:intergenic
TATGTTAATCTGGGAAGAAA+GGG 0.508518 1.3:-61668442 MS.gene20850:CDS
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1.3:-61668060 MS.gene20850:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1.3:+61668865 None:intergenic
AATGAATACTGGTTTATCAA+TGG 0.512649 1.3:-61673809 MS.gene20850:CDS
CTTTCTTCATTGCCATTGGA+TGG 0.517203 1.3:+61671017 None:intergenic
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1.3:-61669312 MS.gene20850:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1.3:+61668793 None:intergenic
TGGAGATCTAATAAGGAATG+AGG 0.518743 1.3:-61672527 MS.gene20850:CDS
CATCCAATGGCAATGAAGAA+AGG 0.522261 1.3:-61671016 MS.gene20850:CDS
CTATCAATATTGATGCAAGT+TGG 0.529019 1.3:-61672837 MS.gene20850:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1.3:-61668061 MS.gene20850:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1.3:-61669034 MS.gene20850:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1.3:+61669117 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1.3:-61671326 MS.gene20850:intron
GACAATGCGAGTGATATAAT+CGG 0.541959 1.3:+61672672 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1.3:+61671520 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1.3:-61673015 MS.gene20850:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1.3:-61669234 MS.gene20850:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1.3:-61669088 MS.gene20850:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1.3:-61672660 MS.gene20850:CDS
TATTTGAAGTGGATGATACA+GGG 0.550570 1.3:-61670694 MS.gene20850:CDS
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1.3:-61668409 MS.gene20850:CDS
AAAGAGATGGAGAAACACTA+TGG 0.555732 1.3:-61668016 MS.gene20850:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1.3:-61672727 MS.gene20850:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1.3:-61671106 MS.gene20850:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1.3:-61672948 MS.gene20850:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1.3:-61668277 MS.gene20850:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1.3:-61670956 MS.gene20850:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1.3:-61673019 MS.gene20850:CDS
AGCAAGATCATGAAAGATGA+AGG 0.564158 1.3:+61673775 None:intergenic
CTGTTAAATTTACTGATGAA+GGG 0.567152 1.3:-61670886 MS.gene20850:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1.3:-61673543 MS.gene20850:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1.3:-61670603 MS.gene20850:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1.3:-61668045 MS.gene20850:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1.3:-61672661 MS.gene20850:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1.3:+61669099 None:intergenic
TCTTGCAAGGATCAAGCTGT+TGG 0.574460 1.3:-61672496 MS.gene20850:CDS
CACACACTTTCATCATTGGA+AGG 0.574607 1.3:+61668505 None:intergenic
GGAGATCTAATAAGGAATGA+GGG 0.576644 1.3:-61672526 MS.gene20850:CDS
GTGTTATGAAACATTTGTCT+TGG 0.576661 1.3:-61670799 MS.gene20850:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1.3:-61668248 MS.gene20850:CDS
GCATGGAGACATTGGAATTG+TGG 0.579000 1.3:-61669334 MS.gene20850:CDS
GCTGACCACTGAGACTGGAA+TGG 0.584171 1.3:-61667951 MS.gene20850:CDS
AGTTGATTTGTACCATCCAA+TGG 0.585418 1.3:-61671029 MS.gene20850:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1.3:-61671110 MS.gene20850:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1.3:-61668947 MS.gene20850:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1.3:-61673553 MS.gene20850:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1.3:-61668479 MS.gene20850:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1.3:+61668269 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1.3:+61668328 None:intergenic
GGCACATAACAGTTAGAGCA+TGG 0.600016 1.3:-61670865 MS.gene20850:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1.3:-61671056 MS.gene20850:CDS
AGAAAGGGTTCTGTTCATCA+AGG 0.603447 1.3:-61668427 MS.gene20850:CDS
TGAGGGAGCTGTATCTTGCA+AGG 0.603521 1.3:-61672509 MS.gene20850:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1.3:+61669118 None:intergenic
ATCCAATTACCACCAAACTC+AGG 0.607344 1.3:+61668571 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1.3:+61669105 None:intergenic
GAAGTGGATGATACAGGGAA+AGG 0.611039 1.3:-61670689 MS.gene20850:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1.3:-61668483 MS.gene20850:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1.3:-61672949 MS.gene20850:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1.3:+61668928 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1.3:-61672895 MS.gene20850:CDS
AACTACATCCTCAAGGAGAG+AGG 0.617424 1.3:+61671048 None:intergenic
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1.3:-61668236 MS.gene20850:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1.3:-61668044 MS.gene20850:CDS
AACAAGGGAGATAAAAGAGA+TGG 0.622706 1.3:-61668029 MS.gene20850:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1.3:-61672947 MS.gene20850:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1.3:+61673555 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1.3:-61668478 MS.gene20850:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1.3:-61672726 MS.gene20850:CDS
ACAAATCAACTACATCCTCA+AGG 0.638614 1.3:+61671041 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1.3:+61670713 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1.3:-61668247 MS.gene20850:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1.3:-61672946 MS.gene20850:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1.3:+61673361 None:intergenic
AATGTTTCATAACACTCTTG+CGG 0.652693 1.3:+61670807 None:intergenic
AGACATTGGAATTGTGGACA+AGG 0.654185 1.3:-61669328 MS.gene20850:CDS
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1.3:-61668269 MS.gene20850:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1.3:+61669116 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1.3:-61668494 MS.gene20850:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1.3:-61672890 MS.gene20850:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1.3:+61673550 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1.3:+61668202 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1.3:-61668065 MS.gene20850:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1.3:+61673030 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1.3:+61667946 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1.3:-61672725 MS.gene20850:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1.3:-61669128 MS.gene20850:CDS
CTTCTCTGATGTTCACACCA+AGG 0.706528 1.3:-61673360 MS.gene20850:intron
CTATTCCCATAATATCAATG+GGG 0.765530 1.3:+61672428 None:intergenic
GTGACCATGAGATACCAACA+TGG 0.814649 1.3:+61673539 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTAGTAAAATTATTTTT+TGG + chr1.3:61669424-61669443 None:intergenic 10.0%
!!! AACTAATTTTATTAAATAAC+AGG - chr1.3:61669947-61669966 MS.gene20850:intron 10.0%
!!! AAGTAGTAAAATTATTTTTT+GGG + chr1.3:61669423-61669442 None:intergenic 10.0%
!!! GTATTTGAATATTTTTTTTA+TGG + chr1.3:61669617-61669636 None:intergenic 10.0%
!! ATAAGCAAACAAAATATTTA+TGG + chr1.3:61668378-61668397 None:intergenic 15.0%
!! CATTTAATAAAAATGTCAAA+TGG - chr1.3:61672301-61672320 MS.gene20850:intron 15.0%
!! TATCATTAAAAATCATCAAA+CGG + chr1.3:61669104-61669123 None:intergenic 15.0%
!!! AAAATATTTATGGTTTTGAA+GGG + chr1.3:61668368-61668387 None:intergenic 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG + chr1.3:61672485-61672504 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG - chr1.3:61673565-61673584 MS.gene20850:CDS 15.0%
!!! ATGATTTTTATACAACTAAA+AGG + chr1.3:61672284-61672303 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG + chr1.3:61669714-61669733 None:intergenic 15.0%
!!! TGATTTTTATACAACTAAAA+GGG + chr1.3:61672283-61672302 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG + chr1.3:61669715-61669734 None:intergenic 15.0%
!!! TTTTATTTTGTTACAATCTT+AGG - chr1.3:61670531-61670550 MS.gene20850:intron 15.0%
!! AAATGTTTGATATATAAGAG+AGG + chr1.3:61671375-61671394 None:intergenic 20.0%
!! AAGAAGATCAAAAAAGAAAA+GGG - chr1.3:61672703-61672722 MS.gene20850:CDS 20.0%
!! AGTTCATATATGATATAGAA+AGG - chr1.3:61672100-61672119 MS.gene20850:intron 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG - chr1.3:61670277-61670296 MS.gene20850:intron 20.0%
!! ATGATAATCAAAACAAAACT+TGG + chr1.3:61672889-61672908 None:intergenic 20.0%
!! ATTAAGATATAATCATAAGG+AGG + chr1.3:61673480-61673499 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG + chr1.3:61670270-61670289 None:intergenic 20.0%
!! GTTAGTTAATATACTACTAT+TGG + chr1.3:61669347-61669366 None:intergenic 20.0%
!! TCCATTAAGATATAATCATA+AGG + chr1.3:61673483-61673502 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG - chr1.3:61673479-61673498 MS.gene20850:CDS 20.0%
!! TTAAGATTCAAATCATGAAT+TGG + chr1.3:61672239-61672258 None:intergenic 20.0%
!! TTAATTTATTTGCACTTTGT+AGG - chr1.3:61668591-61668610 MS.gene20850:CDS 20.0%
!! TTATGGAATGTGTTTATAAA+CGG + chr1.3:61669600-61669619 None:intergenic 20.0%
!! TTCAATGCTTGAAATAATAA+CGG + chr1.3:61668622-61668641 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG + chr1.3:61670470-61670489 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG + chr1.3:61669397-61669416 None:intergenic 20.0%
!!! AAATATCTTTGTAGCTTTAA+TGG - chr1.3:61668567-61668586 MS.gene20850:CDS 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG + chr1.3:61670336-61670355 None:intergenic 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG - chr1.3:61668082-61668101 MS.gene20850:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG + chr1.3:61668369-61668388 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG + chr1.3:61672486-61672505 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG - chr1.3:61672008-61672027 MS.gene20850:intron 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG + chr1.3:61669801-61669820 None:intergenic 20.0%
!!! TTGATTTGTAACAAAGATTA+AGG - chr1.3:61667998-61668017 MS.gene20850:CDS 20.0%
! AAAAACTTCTTTCCACTTAA+TGG + chr1.3:61673315-61673334 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG + chr1.3:61668350-61668369 None:intergenic 25.0%
! AATACAAAATCCATAAGACA+TGG + chr1.3:61670969-61670988 None:intergenic 25.0%
! AATCCAAGTCATAAAGAAAA+GGG - chr1.3:61670011-61670030 MS.gene20850:intron 25.0%
! ACAAAAATCCTATGTTAATC+TGG - chr1.3:61673227-61673246 MS.gene20850:intron 25.0%
! ACATTTCAATCAAACCAATA+AGG + chr1.3:61670247-61670266 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG + chr1.3:61668349-61668368 None:intergenic 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG + chr1.3:61672928-61672947 None:intergenic 25.0%
! ATGACATTTGTGAACATATT+TGG + chr1.3:61669880-61669899 None:intergenic 25.0%
! ATGTTCAAGAAGAAAAACAA+TGG - chr1.3:61672856-61672875 MS.gene20850:CDS 25.0%
! CAAAAATCCTATGTTAATCT+GGG - chr1.3:61673228-61673247 MS.gene20850:intron 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG - chr1.3:61672702-61672721 MS.gene20850:CDS 25.0%
! CTGTTAAATTTACTGATGAA+GGG - chr1.3:61670793-61670812 MS.gene20850:CDS 25.0%
! GATGGAAAAGTTATTGTAAA+AGG - chr1.3:61669066-61669085 MS.gene20850:CDS 25.0%
! TAATCCAAGTCATAAAGAAA+AGG - chr1.3:61670010-61670029 MS.gene20850:intron 25.0%
! TACAAAATATTGTTAACGAG+CGG - chr1.3:61670485-61670504 MS.gene20850:intron 25.0%
! TCTATTCCCATAATATCAAT+GGG + chr1.3:61669255-61669274 None:intergenic 25.0%
! TGATATTATGGGAATAGAAT+CGG - chr1.3:61669257-61669276 MS.gene20850:CDS 25.0%
! TGTGATCTTAATTCATTTCT+TGG + chr1.3:61673150-61673169 None:intergenic 25.0%
! TGTTTCATTAGAATGAATCA+AGG + chr1.3:61671978-61671997 None:intergenic 25.0%
! TTAGTTGTCAATTCATTTAG+AGG - chr1.3:61671181-61671200 MS.gene20850:intron 25.0%
! TTCTATTCCCATAATATCAA+TGG + chr1.3:61669256-61669275 None:intergenic 25.0%
!! AAGTACTATTTGGTATTTTC+GGG + chr1.3:61669396-61669415 None:intergenic 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG - chr1.3:61670083-61670102 MS.gene20850:intron 25.0%
!! ATTAAGTGGAAAGAAGTTTT+TGG - chr1.3:61673314-61673333 MS.gene20850:intron 25.0%
!! GATAGTGTTGTTAGATATTA+TGG + chr1.3:61668827-61668846 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG + chr1.3:61669064-61669083 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG - chr1.3:61670974-61670993 MS.gene20850:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG - chr1.3:61673597-61673616 MS.gene20850:intron 25.0%
!! TTTTTATACAACTAAAAGGG+AGG + chr1.3:61672280-61672299 None:intergenic 25.0%
!!! AATGTCAAATGGTTTTTTCT+AGG - chr1.3:61672312-61672331 MS.gene20850:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG + chr1.3:61672480-61672499 None:intergenic 25.0%
!!! TTATATCTTAATGGATTGTC+AGG - chr1.3:61673488-61673507 MS.gene20850:CDS 25.0%
!!! TTTGTTGATGATGATTTCAT+TGG + chr1.3:61668254-61668273 None:intergenic 25.0%
AAAGACAAAAGAGAAGTGAT+TGG + chr1.3:61672048-61672067 None:intergenic 30.0%
AACAATCTACTACCATGAAA+TGG + chr1.3:61673069-61673088 None:intergenic 30.0%
AATGTTTCATAACACTCTTG+CGG + chr1.3:61670875-61670894 None:intergenic 30.0%
ACAAATCTCATACATAGGAA+TGG - chr1.3:61668660-61668679 MS.gene20850:CDS 30.0%
AGAGTCATATTGTTTGTGTT+GGG + chr1.3:61671910-61671929 None:intergenic 30.0%
AGGTGACATTAGTAGAATTA+AGG + chr1.3:61668301-61668320 None:intergenic 30.0%
AGTAAATGCTCTTTCTTGAT+AGG + chr1.3:61673771-61673790 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG + chr1.3:61673354-61673373 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG + chr1.3:61670364-61670383 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG + chr1.3:61672583-61672602 None:intergenic 30.0%
ATTATCATTGATGCAAATGC+AGG - chr1.3:61672901-61672920 MS.gene20850:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG - chr1.3:61669132-61669151 MS.gene20850:CDS 30.0%
ATTTATTTGCACTTTGTAGG+TGG - chr1.3:61668594-61668613 MS.gene20850:CDS 30.0%
CAAGTTAAAGAGAATTCTGT+TGG - chr1.3:61671056-61671075 MS.gene20850:CDS 30.0%
CATTCTTTACATTACTGATG+AGG - chr1.3:61672591-61672610 MS.gene20850:CDS 30.0%
CCTATGAATAGGTAAAATGT+TGG + chr1.3:61671856-61671875 None:intergenic 30.0%
CTAGTGTTTGGATTAAGTAT+AGG + chr1.3:61671654-61671673 None:intergenic 30.0%
CTAGTGTTTGTATCAAGTAT+AGG + chr1.3:61671518-61671537 None:intergenic 30.0%
CTATCAATATTGATGCAAGT+TGG - chr1.3:61668842-61668861 MS.gene20850:CDS 30.0%
CTATTCCCATAATATCAATG+GGG + chr1.3:61669254-61669273 None:intergenic 30.0%
GACTCTTATCGTCTATAAAT+AGG + chr1.3:61671400-61671419 None:intergenic 30.0%
GCTACCAATGTTGTTAAATA+GGG - chr1.3:61670395-61670414 MS.gene20850:intron 30.0%
GCTGTTAAATTTACTGATGA+AGG - chr1.3:61670792-61670811 MS.gene20850:CDS 30.0%
GGTGACATTAGTAGAATTAA+GGG + chr1.3:61668300-61668319 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG - chr1.3:61673054-61673073 MS.gene20850:CDS 30.0%
GTGTTATGAAACATTTGTCT+TGG - chr1.3:61670880-61670899 MS.gene20850:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG - chr1.3:61669126-61669145 MS.gene20850:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG + chr1.3:61673009-61673028 None:intergenic 30.0%
TAGAGTCATATTGTTTGTGT+TGG + chr1.3:61671911-61671930 None:intergenic 30.0%
TATCATCTTGATCAATTGCT+TGG + chr1.3:61673032-61673051 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG - chr1.3:61673353-61673372 MS.gene20850:intron 30.0%
TATGTTAATCTGGGAAGAAA+GGG - chr1.3:61673237-61673256 MS.gene20850:intron 30.0%
TCAAGGGACAAAATCATATT+TGG - chr1.3:61669035-61669054 MS.gene20850:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG - chr1.3:61672974-61672993 MS.gene20850:CDS 30.0%
TCACATGAATTTGCATCATT+GGG - chr1.3:61668886-61668905 MS.gene20850:CDS 30.0%
TGATTTACCTAGCAAATCTT+GGG + chr1.3:61670363-61670382 None:intergenic 30.0%
TGCTACCAATGTTGTTAAAT+AGG - chr1.3:61670394-61670413 MS.gene20850:intron 30.0%
TTCACATGAATTTGCATCAT+TGG - chr1.3:61668885-61668904 MS.gene20850:CDS 30.0%
TTCTGAACTTGGTTTCAAAT+TGG + chr1.3:61670306-61670325 None:intergenic 30.0%
TTCTTTCCACTTAATGGTTT+AGG + chr1.3:61673309-61673328 None:intergenic 30.0%
TTGACACAAATCTCATACAT+AGG - chr1.3:61668655-61668674 MS.gene20850:CDS 30.0%
TTTGCTAGGTAAATCATCAT+AGG - chr1.3:61670367-61670386 MS.gene20850:intron 30.0%
! AATCCCTTTTCTTTATGACT+TGG + chr1.3:61670017-61670036 None:intergenic 30.0%
! AGTCTTGGATTTTTGCAATT+TGG + chr1.3:61670850-61670869 None:intergenic 30.0%
! ATTGATGCAAGTTGGATAAA+TGG - chr1.3:61668850-61668869 MS.gene20850:CDS 30.0%
! CACACATTTTACCCATTTAT+AGG - chr1.3:61671429-61671448 MS.gene20850:CDS 30.0%
! CCAACATTTTACCTATTCAT+AGG - chr1.3:61671853-61671872 MS.gene20850:intron 30.0%
! TATTTGAAGTGGATGATACA+GGG - chr1.3:61670985-61671004 MS.gene20850:CDS 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG - chr1.3:61670307-61670326 MS.gene20850:intron 30.0%
! TTTGGGTACAAAGTACTATT+TGG + chr1.3:61669406-61669425 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG - chr1.3:61669491-61669510 MS.gene20850:intron 30.0%
! TTTTTCACACACTACAATGA+TGG - chr1.3:61668691-61668710 MS.gene20850:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG - chr1.3:61669145-61669164 MS.gene20850:CDS 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG + chr1.3:61669383-61669402 None:intergenic 30.0%
!!! TATTTTTTTTCTTTTCGCGC+TGG + chr1.3:61668552-61668571 None:intergenic 30.0%
AAAAATGCAACTAGAGGAAG+AGG - chr1.3:61670596-61670615 MS.gene20850:CDS 35.0%
AAAGAGATGGAGAAACACTA+TGG - chr1.3:61673663-61673682 MS.gene20850:intron 35.0%
AAATGGGTAAAATGTGTGAG+TGG + chr1.3:61671427-61671446 None:intergenic 35.0%
AACAAGGGAGATAAAAGAGA+TGG - chr1.3:61673650-61673669 MS.gene20850:intron 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG - chr1.3:61672807-61672826 MS.gene20850:CDS 35.0%
AATGTACTCTAGATTTGCGA+AGG - chr1.3:61668511-61668530 MS.gene20850:CDS 35.0%
ACAAATCAACTACATCCTCA+AGG + chr1.3:61670641-61670660 None:intergenic 35.0%
ACTATTGACCAATGTGAGAA+TGG - chr1.3:61673402-61673421 MS.gene20850:CDS 35.0%
ACTCATACGTGAAATTGATG+TGG - chr1.3:61669687-61669706 MS.gene20850:intron 35.0%
AGCAAAAGCAAGACTCTTAT+TGG + chr1.3:61670189-61670208 None:intergenic 35.0%
AGCAAGATCATGAAAGATGA+AGG + chr1.3:61667907-61667926 None:intergenic 35.0%
AGCAATCCTAAACCATTAAG+TGG - chr1.3:61673300-61673319 MS.gene20850:intron 35.0%
AGTTGTTCATAGAGAGCTTA+GGG - chr1.3:61672632-61672651 MS.gene20850:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG - chr1.3:61670723-61670742 MS.gene20850:CDS 35.0%
ATCTCATACATAGGAATGGA+AGG - chr1.3:61668664-61668683 MS.gene20850:CDS 35.0%
ATGCTCTTTCTTGATAGGTT+TGG + chr1.3:61673766-61673785 None:intergenic 35.0%
ATGTACTCTAACTCATCTAG+TGG - chr1.3:61668730-61668749 MS.gene20850:CDS 35.0%
CAAGGTGAAATAGAAGAAAG+TGG - chr1.3:61673270-61673289 MS.gene20850:intron 35.0%
CATAAGACATGGATCTTGTT+GGG + chr1.3:61670958-61670977 None:intergenic 35.0%
CATTATTGGGTGAATGCTTT+AGG - chr1.3:61671256-61671275 MS.gene20850:intron 35.0%
CTAGAATCAACAGAATAGGA+GGG - chr1.3:61668953-61668972 MS.gene20850:CDS 35.0%
CTATGTTAATCTGGGAAGAA+AGG - chr1.3:61673236-61673255 MS.gene20850:intron 35.0%
CTTTCTTCCCAGATTAACAT+AGG + chr1.3:61673238-61673257 None:intergenic 35.0%
GACAATGCGAGTGATATAAT+CGG + chr1.3:61669010-61669029 None:intergenic 35.0%
GAGACAGTGAATTATGAGTA+TGG - chr1.3:61672433-61672452 MS.gene20850:CDS 35.0%
GGAGACCAACTTAAAACAAA+TGG - chr1.3:61670328-61670347 MS.gene20850:intron 35.0%
GGAGATCTAATAAGGAATGA+GGG - chr1.3:61669153-61669172 MS.gene20850:CDS 35.0%
GTAGATTGTTCCAAGTCATT+AGG - chr1.3:61673079-61673098 MS.gene20850:intron 35.0%
GTGTTTGGATTAAGTATAGG+AGG + chr1.3:61671651-61671670 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG + chr1.3:61671515-61671534 None:intergenic 35.0%
GTTGTATTGGACTCTTGTAA+TGG - chr1.3:61670693-61670712 MS.gene20850:CDS 35.0%
TACAAGAAATGGGTATACCT+TGG + chr1.3:61668339-61668358 None:intergenic 35.0%
TAGAATCAACAGAATAGGAG+GGG - chr1.3:61668954-61668973 MS.gene20850:CDS 35.0%
TAGACACACACTTTCATCAT+TGG + chr1.3:61673181-61673200 None:intergenic 35.0%
TATCAGTGATCAAAGTTCAC+CGG - chr1.3:61672732-61672751 MS.gene20850:CDS 35.0%
TATGAGATTTGTGTCAAGTG+AGG + chr1.3:61668652-61668671 None:intergenic 35.0%
TCAGCTAGAATCAACAGAAT+AGG - chr1.3:61668949-61668968 MS.gene20850:CDS 35.0%
TCATATTTGGCTACCAAAGA+TGG - chr1.3:61669048-61669067 MS.gene20850:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG + chr1.3:61672982-61673001 None:intergenic 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG - chr1.3:61672978-61672997 MS.gene20850:CDS 35.0%
TGCTACCCCATTGATATTAT+GGG - chr1.3:61669246-61669265 MS.gene20850:CDS 35.0%
TGGAGATCTAATAAGGAATG+AGG - chr1.3:61669152-61669171 MS.gene20850:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG - chr1.3:61668731-61668750 MS.gene20850:CDS 35.0%
TGTGCCCTATTTAACAACAT+TGG + chr1.3:61670402-61670421 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG - chr1.3:61667906-61667925 MS.gene20850:CDS 35.0%
TTGCTACCCCATTGATATTA+TGG - chr1.3:61669245-61669264 MS.gene20850:CDS 35.0%
TTGGATTAAGTATAGGAGGT+GGG + chr1.3:61671647-61671666 None:intergenic 35.0%
TTTGGATTAAGTATAGGAGG+TGG + chr1.3:61671648-61671667 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG + chr1.3:61669990-61670009 None:intergenic 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG + chr1.3:61671809-61671828 None:intergenic 35.0%
! ACCTTAAGGCATTAGGTATA+TGG - chr1.3:61671812-61671831 MS.gene20850:intron 35.0%
! AGATGAGAGATCCATTTTGT+GGG + chr1.3:61669989-61670008 None:intergenic 35.0%
! AGGAGGATTAGTAAAATCCT+TGG + chr1.3:61673463-61673482 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG - chr1.3:61668797-61668816 MS.gene20850:CDS 35.0%
! CCTTAAGGCATTAGGTATAT+GGG - chr1.3:61671813-61671832 MS.gene20850:intron 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG - chr1.3:61670680-61670699 MS.gene20850:CDS 35.0%
! GTATTTGAAGTGGATGATAC+AGG - chr1.3:61670984-61671003 MS.gene20850:CDS 35.0%
! GTTGTGTTATTGTAGGCATA+TGG - chr1.3:61668089-61668108 MS.gene20850:intron 35.0%
! TACCTAATGCCTTAAGGTTT+TGG + chr1.3:61671810-61671829 None:intergenic 35.0%
! TTTTTATTACCGAACTGTCG+TGG - chr1.3:61668426-61668445 MS.gene20850:CDS 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG + chr1.3:61671020-61671039 None:intergenic 35.0%
!! AGTTGATTTGTACCATCCAA+TGG - chr1.3:61670650-61670669 MS.gene20850:CDS 35.0%
!! GAAGAAAATAAAGAGTGCTG+AGG + chr1.3:61667975-61667994 None:intergenic 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG + chr1.3:61673758-61673777 None:intergenic 35.0%
!!! ATTGTTGGGTTTTAAGTGAG+TGG + chr1.3:61671470-61671489 None:intergenic 35.0%
!!! GCGAAGGAAATTCACTTTTT+TGG - chr1.3:61668474-61668493 MS.gene20850:CDS 35.0%
AAATGTTGGATCCGTAAGAG+AGG + chr1.3:61671842-61671861 None:intergenic 40.0%
AACAAGTGGTATTAGTGCCT+TGG + chr1.3:61671708-61671727 None:intergenic 40.0%
AAGTGTGGAACAATGTTGGA+AGG - chr1.3:61673200-61673219 MS.gene20850:intron 40.0%
ACAATTCGTACTGCTAGTTC+TGG - chr1.3:61672499-61672518 MS.gene20850:CDS 40.0%
ACACCTTTCTTCATTGCCAT+TGG + chr1.3:61670669-61670688 None:intergenic 40.0%
ACTTGACACAAGCAAGATTG+AGG - chr1.3:61670569-61670588 MS.gene20850:intron 40.0%
AGAAAGGGTTCTGTTCATCA+AGG - chr1.3:61673252-61673271 MS.gene20850:intron 40.0%
AGACATTGGAATTGTGGACA+AGG - chr1.3:61672351-61672370 MS.gene20850:intron 40.0%
AGGCACTAATACCACTTGTT+GGG - chr1.3:61671708-61671727 MS.gene20850:CDS 40.0%
AGGGAGAATCTTGGGTTTAT+GGG + chr1.3:61671614-61671633 None:intergenic 40.0%
AGTCTCACGTCACCTATAAA+TGG + chr1.3:61671444-61671463 None:intergenic 40.0%
AGTGTGGAACAATGTTGGAA+GGG - chr1.3:61673201-61673220 MS.gene20850:intron 40.0%
ATCCAATTACCACCAAACTC+AGG + chr1.3:61673111-61673130 None:intergenic 40.0%
ATTAGGCTTCTTCCTGAGTT+TGG - chr1.3:61673096-61673115 MS.gene20850:intron 40.0%
ATTCACGTGTGAAAGGTGAT+AGG - chr1.3:61670730-61670749 MS.gene20850:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG + chr1.3:61668798-61668817 None:intergenic 40.0%
CAAGATAAGCACGAAGATCA+TGG + chr1.3:61670220-61670239 None:intergenic 40.0%
CACACACTTTCATCATTGGA+AGG + chr1.3:61673177-61673196 None:intergenic 40.0%
CACTGTCTCATTCTCACATA+AGG + chr1.3:61672422-61672441 None:intergenic 40.0%
CAGTTGTTCATAGAGAGCTT+AGG - chr1.3:61672631-61672650 MS.gene20850:CDS 40.0%
CATCCAATGGCAATGAAGAA+AGG - chr1.3:61670663-61670682 MS.gene20850:CDS 40.0%
CCAACAAGATCCATGTCTTA+TGG - chr1.3:61670956-61670975 MS.gene20850:CDS 40.0%
CCATAAGACATGGATCTTGT+TGG + chr1.3:61670959-61670978 None:intergenic 40.0%
CCCATATACCTAATGCCTTA+AGG + chr1.3:61671816-61671835 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG - chr1.3:61672814-61672833 MS.gene20850:CDS 40.0%
CTCTTGTGGTTATGGAACAT+TGG + chr1.3:61671766-61671785 None:intergenic 40.0%
CTTTCTTCATTGCCATTGGA+TGG + chr1.3:61670665-61670684 None:intergenic 40.0%
GAGCTTAGGGATTAAAGTCA+AGG - chr1.3:61672645-61672664 MS.gene20850:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG - chr1.3:61668952-61668971 MS.gene20850:CDS 40.0%
GTACTCTAACTCATCTAGTG+GGG - chr1.3:61668732-61668751 MS.gene20850:CDS 40.0%
GTCTAAGTGTGGAACAATGT+TGG - chr1.3:61673196-61673215 MS.gene20850:intron 40.0%
GTCTATGTCTCTTGTGGTTA+TGG + chr1.3:61671774-61671793 None:intergenic 40.0%
GTCTCACATTGCCTATGAAT+AGG + chr1.3:61671867-61671886 None:intergenic 40.0%
GTCTCACGTCACCTATAAAT+GGG + chr1.3:61671443-61671462 None:intergenic 40.0%
TACTCTAACTCATCTAGTGG+GGG - chr1.3:61668733-61668752 MS.gene20850:CDS 40.0%
TATATGGGTCACCTCTCTTA+CGG - chr1.3:61671828-61671847 MS.gene20850:intron 40.0%
TATGAGTATGGATCAACCTC+AGG - chr1.3:61672445-61672464 MS.gene20850:CDS 40.0%
TGATTTATCCTCTCTCCTTG+AGG - chr1.3:61670623-61670642 MS.gene20850:CDS 40.0%
TGTTCAAGAGGGTTTAACCA+AGG - chr1.3:61673443-61673462 MS.gene20850:CDS 40.0%
TTCTAGGTACGTTTGATGCA+TGG - chr1.3:61672328-61672347 MS.gene20850:intron 40.0%
TTGGTCTCCAATTCTGAACT+TGG + chr1.3:61670317-61670336 None:intergenic 40.0%
TTGTTAACGAGCGGCTATAA+TGG - chr1.3:61670494-61670513 MS.gene20850:intron 40.0%
! AAGGCACTAATACCACTTGT+TGG - chr1.3:61671707-61671726 MS.gene20850:CDS 40.0%
! AATTGTGCCCAAGATTTGCT+AGG - chr1.3:61670353-61670372 MS.gene20850:intron 40.0%
! ACCCAAAACCTTAAGGCATT+AGG - chr1.3:61671805-61671824 MS.gene20850:intron 40.0%
! ATACCAACATGGTGTCAATG+AGG + chr1.3:61668132-61668151 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG - chr1.3:61668796-61668815 MS.gene20850:CDS 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG - chr1.3:61673185-61673204 MS.gene20850:intron 40.0%
! TGACACTGGAATGGTTTTTG+GGG - chr1.3:61668798-61668817 MS.gene20850:CDS 40.0%
! TTCCTGAGTTTGGTGGTAAT+TGG - chr1.3:61673106-61673125 MS.gene20850:intron 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG - chr1.3:61673372-61673391 MS.gene20850:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG + chr1.3:61672817-61672836 None:intergenic 40.0%
!! GTTTGTGTTGGGTTTCTAGT+AGG + chr1.3:61671899-61671918 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + chr1.3:61671806-61671825 None:intergenic 40.0%
AACAAGTGGTTGCAATGTGC+TGG + chr1.3:61671574-61671593 None:intergenic 45.0%
AACTACATCCTCAAGGAGAG+AGG + chr1.3:61670634-61670653 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG - chr1.3:61673614-61673633 MS.gene20850:intron 45.0%
ACTCACTTGAGGGAGAATCT+TGG + chr1.3:61671623-61671642 None:intergenic 45.0%
ACTTGGGATTGTGCAGTCAT+TGG - chr1.3:61671100-61671119 MS.gene20850:CDS 45.0%
AGAATGACATGTGAAGGCTC+AGG + chr1.3:61672577-61672596 None:intergenic 45.0%
AGCACATTGCAACCACTTGT+TGG - chr1.3:61671573-61671592 MS.gene20850:CDS 45.0%
AGTCTTCGGAGATGAGTTCT+AGG - chr1.3:61672755-61672774 MS.gene20850:CDS 45.0%
ATTAGTGCCTTGGTTCAGCT+TGG + chr1.3:61671698-61671717 None:intergenic 45.0%
ATTCCAGTGTCATGGTTCAC+AGG + chr1.3:61668790-61668809 None:intergenic 45.0%
CAGGAAGAAGCCTAATGACT+TGG + chr1.3:61673092-61673111 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - chr1.3:61671798-61671817 MS.gene20850:intron 45.0%
CCAATGTGAGAATGGTGAAG+AGG - chr1.3:61673410-61673429 MS.gene20850:CDS 45.0%
CCTCTTCACCATTCTCACAT+TGG + chr1.3:61673413-61673432 None:intergenic 45.0%
CGTTTGATGCATGGAGACAT+TGG - chr1.3:61672337-61672356 MS.gene20850:intron 45.0%
CTCACTTGAGGGAGAATCTT+GGG + chr1.3:61671622-61671641 None:intergenic 45.0%
CTTCTCTGATGTTCACACCA+AGG - chr1.3:61668319-61668338 MS.gene20850:CDS 45.0%
GAAATCCATTCCAGTCTCAG+TGG + chr1.3:61673736-61673755 None:intergenic 45.0%
GAAGTGGATGATACAGGGAA+AGG - chr1.3:61670990-61671009 MS.gene20850:CDS 45.0%
GACAAGGAAGTTGGCAAAAG+AGG - chr1.3:61672367-61672386 MS.gene20850:intron 45.0%
GACACCATGTTGGTATCTCA+TGG - chr1.3:61668136-61668155 MS.gene20850:intron 45.0%
GAGAATTCTGTTGGCCAAGT+AGG - chr1.3:61671065-61671084 MS.gene20850:CDS 45.0%
GAGGGAGAATCTTGGGTTTA+TGG + chr1.3:61671615-61671634 None:intergenic 45.0%
GATCTTCGTGCTTATCTTGC+AGG - chr1.3:61670221-61670240 MS.gene20850:intron 45.0%
GCACATTGCAACCACTTGTT+GGG - chr1.3:61671574-61671593 MS.gene20850:CDS 45.0%
GCATGGAGACATTGGAATTG+TGG - chr1.3:61672345-61672364 MS.gene20850:intron 45.0%
GCTGTGAGAACTGTTCAAGA+GGG - chr1.3:61673432-61673451 MS.gene20850:CDS 45.0%
GGAAGTGGGATTCTAGTGTT+TGG + chr1.3:61671666-61671685 None:intergenic 45.0%
GGAATTGTGGACAAGGAAGT+TGG - chr1.3:61672358-61672377 MS.gene20850:intron 45.0%
GGCACATAACAGTTAGAGCA+TGG - chr1.3:61670814-61670833 MS.gene20850:CDS 45.0%
GGCAGGAAAAATGCAACTAG+AGG - chr1.3:61670590-61670609 MS.gene20850:CDS 45.0%
GGCATCTGTCCAATTCATTG+TGG + chr1.3:61673609-61673628 None:intergenic 45.0%
GGGAGAATCTTGGGTTTATG+GGG + chr1.3:61671613-61671632 None:intergenic 45.0%
GTGACCATGAGATACCAACA+TGG + chr1.3:61668143-61668162 None:intergenic 45.0%
GTGTTAGCTGTCCCACAAAA+TGG - chr1.3:61669975-61669994 MS.gene20850:intron 45.0%
TAAGTAGTTCGAGATCGCGA+AGG - chr1.3:61668458-61668477 MS.gene20850:CDS 45.0%
TCAAAGTTCACCGGAGTCTT+CGG - chr1.3:61672741-61672760 MS.gene20850:CDS 45.0%
TCTTGCAAGGATCAAGCTGT+TGG - chr1.3:61669183-61669202 MS.gene20850:CDS 45.0%
TGGGGAATCTGAGGAAACAT+CGG - chr1.3:61671727-61671746 MS.gene20850:intron 45.0%
TGTGAACCATGACACTGGAA+TGG - chr1.3:61668789-61668808 MS.gene20850:CDS 45.0%
TGTGGTGTCTATGTCTCTTG+TGG + chr1.3:61671780-61671799 None:intergenic 45.0%
TTCTCTCTCTCTCTCTCTCA+TGG + chr1.3:61671283-61671302 None:intergenic 45.0%
TTGCCTCATTGACACCATGT+TGG - chr1.3:61668126-61668145 MS.gene20850:intron 45.0%
! AACATGGTGTCAATGAGGCA+AGG + chr1.3:61668127-61668146 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG + chr1.3:61668321-61668340 None:intergenic 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG + chr1.3:61670162-61670181 None:intergenic 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG - chr1.3:61670230-61670249 MS.gene20850:intron 45.0%
! GGCACTAATACCACTTGTTG+GGG - chr1.3:61671709-61671728 MS.gene20850:CDS 45.0%
!! AACACTCTTGCGGTTAGTCT+TGG + chr1.3:61670865-61670884 None:intergenic 45.0%
!! AGGAGAGTCAGGAGCATTAT+TGG - chr1.3:61671242-61671261 MS.gene20850:intron 45.0%
!! GGAGAGTCAGGAGCATTATT+GGG - chr1.3:61671243-61671262 MS.gene20850:intron 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG + chr1.3:61672464-61672483 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + chr1.3:61671798-61671817 None:intergenic 45.0%
AATCTGTTAGAGAGCCCGAG+AGG - chr1.3:61671222-61671241 MS.gene20850:intron 50.0%
AATGCTCCTGACTCTCCTCT+CGG + chr1.3:61671240-61671259 None:intergenic 50.0%
ACTCGCATTGTCGATCGTCA+AGG - chr1.3:61669018-61669037 MS.gene20850:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG - chr1.3:61668964-61668983 MS.gene20850:CDS 50.0%
AGGCTTCTTCCTGAGTTTGG+TGG - chr1.3:61673099-61673118 MS.gene20850:intron 50.0%
CAACCTGTGAACCATGACAC+TGG - chr1.3:61668784-61668803 MS.gene20850:CDS 50.0%
CAGTGTCATGGTTCACAGGT+TGG + chr1.3:61668786-61668805 None:intergenic 50.0%
CCACTTTGACCACGACAGTT+CGG + chr1.3:61668438-61668457 None:intergenic 50.0%
CGCTTGAGGGAGAGATTGTT+GGG + chr1.3:61671484-61671503 None:intergenic 50.0%
CTCGCATTGTCGATCGTCAA+GGG - chr1.3:61669019-61669038 MS.gene20850:CDS 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG + chr1.3:61671680-61671699 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG + chr1.3:61672754-61672773 None:intergenic 50.0%
GACACAAGCAAGATTGAGGC+AGG - chr1.3:61670573-61670592 MS.gene20850:intron 50.0%
GACAGATGCCAGTGAAGGAT+GGG - chr1.3:61673619-61673638 MS.gene20850:intron 50.0%
GGAATCTGAGGAAACATCGG+GGG - chr1.3:61671730-61671749 MS.gene20850:intron 50.0%
GGCTGTGAGAACTGTTCAAG+AGG - chr1.3:61673431-61673450 MS.gene20850:CDS 50.0%
GGGAATCTGAGGAAACATCG+GGG - chr1.3:61671729-61671748 MS.gene20850:intron 50.0%
GGGGAATCTGAGGAAACATC+GGG - chr1.3:61671728-61671747 MS.gene20850:intron 50.0%
TCCTCAGATTCCCCAACAAG+TGG + chr1.3:61671722-61671741 None:intergenic 50.0%
TCGCTTGAGGGAGAGATTGT+TGG + chr1.3:61671485-61671504 None:intergenic 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG - chr1.3:61671071-61671090 MS.gene20850:CDS 50.0%
TCTTCCACCAAGCTGAACCA+AGG - chr1.3:61671688-61671707 MS.gene20850:CDS 50.0%
TGAGGGAGCTGTATCTTGCA+AGG - chr1.3:61669170-61669189 MS.gene20850:CDS 50.0%
! ACCACTTGTTGGGGAATCTG+AGG - chr1.3:61671718-61671737 MS.gene20850:intron 50.0%
! AGGATGGGTTTGAGGCAACA+AGG - chr1.3:61673634-61673653 MS.gene20850:intron 50.0%
! CATTGCAACCACTTGTTGGG+CGG - chr1.3:61671577-61671596 MS.gene20850:CDS 50.0%
! GAGGGGCTAACATGGAGTTT+TGG + chr1.3:61672547-61672566 None:intergenic 50.0%
! GGATGGGTTTGAGGCAACAA+GGG - chr1.3:61673635-61673654 MS.gene20850:intron 50.0%
!! GTGGTTGCAATGTGCTGGTT+CGG + chr1.3:61671569-61671588 None:intergenic 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG - chr1.3:61671084-61671103 MS.gene20850:CDS 50.0%
AGGAGGTGAGAACTCGCTTG+AGG + chr1.3:61671498-61671517 None:intergenic 55.0%
AGGAGGTGGGAACTCACTTG+AGG + chr1.3:61671634-61671653 None:intergenic 55.0%
AGTGCCTTGGTTCAGCTTGG+TGG + chr1.3:61671695-61671714 None:intergenic 55.0%
ATGCTCCTGACTCTCCTCTC+GGG + chr1.3:61671239-61671258 None:intergenic 55.0%
CCGAACTGTCGTGGTCAAAG+TGG - chr1.3:61668435-61668454 MS.gene20850:CDS 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG + chr1.3:61671546-61671565 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG - chr1.3:61673723-61673742 MS.gene20850:intron 55.0%
GCCTCAAACCCATCCTTCAC+TGG + chr1.3:61673630-61673649 None:intergenic 55.0%
GCTGACCACTGAGACTGGAA+TGG - chr1.3:61673728-61673747 MS.gene20850:intron 55.0%
GGACAGATGCCAGTGAAGGA+TGG - chr1.3:61673618-61673637 MS.gene20850:intron 55.0%
GGAGGTGAGAACTCGCTTGA+GGG + chr1.3:61671497-61671516 None:intergenic 55.0%
GGAGGTGGGAACTCACTTGA+GGG + chr1.3:61671633-61671652 None:intergenic 55.0%
GTCCCAAGCCAGTTCCTACT+TGG + chr1.3:61671082-61671101 None:intergenic 55.0%
TCCATGTTAGCCCCTCTCAG+AGG - chr1.3:61672551-61672570 MS.gene20850:CDS 55.0%
TGGCCAAGTAGGAACTGGCT+TGG - chr1.3:61671076-61671095 MS.gene20850:CDS 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG - chr1.3:61673626-61673645 MS.gene20850:intron 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG + chr1.3:61671681-61671700 None:intergenic 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG - chr1.3:61671077-61671096 MS.gene20850:CDS 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG + chr1.3:61671687-61671706 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG - chr1.3:61671083-61671102 MS.gene20850:CDS 55.0%
!! TGCAATGTGCTGGTTCGGCT+CGG + chr1.3:61671564-61671583 None:intergenic 55.0%
CCAACAGACCGCCCAACAAG+TGG + chr1.3:61671588-61671607 None:intergenic 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG + chr1.3:61672566-61672585 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG + chr1.3:61672564-61672583 None:intergenic 60.0%
! CCACTTGTTGGGCGGTCTGT+TGG - chr1.3:61671585-61671604 MS.gene20850:CDS 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG + chr1.3:61672565-61672584 None:intergenic 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG + chr1.3:61672555-61672574 None:intergenic 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG + chr1.3:61671547-61671566 None:intergenic 60.0%
!! AATGTGCTGGTTCGGCTCGG+TGG + chr1.3:61671561-61671580 None:intergenic 60.0%
GAGAGCCCGAGAGGAGAGTC+AGG - chr1.3:61671231-61671250 MS.gene20850:intron 65.0%
!! GGTTCGGCTCGGTGGAAGAG+TGG + chr1.3:61671553-61671572 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 61667871 61673830 61667871 ID=MS.gene20850
chr1.3 mRNA 61667871 61673830 61667871 ID=MS.gene20850.t1;Parent=MS.gene20850
chr1.3 exon 61673774 61673830 61673774 ID=MS.gene20850.t1.exon1;Parent=MS.gene20850.t1
chr1.3 CDS 61673774 61673830 61673774 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
chr1.3 exon 61673361 61673597 61673361 ID=MS.gene20850.t1.exon2;Parent=MS.gene20850.t1
chr1.3 CDS 61673361 61673597 61673361 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
chr1.3 exon 61672423 61673088 61672423 ID=MS.gene20850.t1.exon3;Parent=MS.gene20850.t1
chr1.3 CDS 61672423 61673088 61672423 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
chr1.3 exon 61671327 61671732 61671327 ID=MS.gene20850.t1.exon4;Parent=MS.gene20850.t1
chr1.3 CDS 61671327 61671732 61671327 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
chr1.3 exon 61670580 61671148 61670580 ID=MS.gene20850.t1.exon5;Parent=MS.gene20850.t1
chr1.3 CDS 61670580 61671148 61670580 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
chr1.3 exon 61668192 61669367 61668192 ID=MS.gene20850.t1.exon6;Parent=MS.gene20850.t1
chr1.3 CDS 61668192 61669367 61668192 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
chr1.3 exon 61667871 61668077 61667871 ID=MS.gene20850.t1.exon7;Parent=MS.gene20850.t1
chr1.3 CDS 61667871 61668077 61667871 ID=cds.MS.gene20850.t1;Parent=MS.gene20850.t1
Gene Sequence

>MS.gene20850

ATGAATACTGGTTTATCAATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGTACGTCTTTATATTTATGCGTTCATGCTATTTTTCTTCATGTTCCTCAGCACTCTTTATTTTCTTCGATTTGATTTGTAACAAAGATTAAGGAACAATTGAGATTTGTTATTGATGTCTTCAACTAGCACATAGCTACACATAAATTTACGATATTATTTGTTGTGTTATTGTAGGCATATGGTGCACTAATAGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTATACCCATTTCTTGTATAATTTCCCTTCAAAACCATAAATATTTTGTTTGCTTATTTTTTATTATTTTTTATATCAAAATTATTTTTTATTACCGAACTGTCGTGGTCAAAGTGGTAAGTAGTTCGAGATCGCGAAGGAAATTCACTTTTTTGGAGCGAAAACTCTTAAATGTACTCTAGATTTGCGAAGGAATTAAGTTTTCGCGCCAGCGCGAAAAGAAAAAAAATATCTTTGTAGCTTTAATGGTTTAATTTATTTGCACTTTGTAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACTATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTTAATGATAGTGTTTCAATTCAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGAGGGAGCTGTATCTTGCAAGGATCAAGCTGTTGGTTCTAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTACGTTTTTATATTTTTTGCATATTAGTTTGTTTGATTACGATGCAATTTTTTTTCAATTGATTCCAATAGTAGTATATTAACTAACTAAGAAAACAAGACCGTACTTTTGTACCCGAAAATACCAAATAGTACTTTGTACCCAAAAAATAATTTTACTACTTTCACAATACAATTTGCATATTAGTTCACACTTTAATATTTTTATACTATTTTCACAAAACATCTCTCTTGGTCTTGTATCTTATAATTGTTTTCTAATTTTATTTTTTATGCTACATTTTTCTCACTCTATTTCATTATTTATTTAAATAATCACCGTTTATAAACACATTCCATAAAAAAAATATTCAAATACACATTGTTTACAACATTTATTTTAGATAAGTTTTAGCAACATTATTTCTAACTCATACGTGAAATTGATGTGGTCCCATAATTTGAAAATTTAACACACATTAATTGACATGAATTTCACTCAATAAGAAAGTGAACATTGTGTTTTTTTGTCGAACAAAACCTTAATAGTTTTAACTCAAAGAAGAAGAAAAAAAAAAAATCAAGTAATAATGACTTCAATTAACATGTGTTTAATTATCCAAATATGTTCACAAATGTCATGTATGTTTCAATTAACATGTACGTAACTAAATATTTTTCTTATCTCTAACTAATTTTATTAAATAACAGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGATGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATACAACAAAAAGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGTAAATCATCATAGGTTCATGCTACCAATGTTGTTAAATAGGGCACATTATAGTGTTACAACATAATTGAATTTAAACAAATTGTTGTTGTTCCGTGATATACTATTTAGTACAAAATATTGTTAACGAGCGGCTATAATGGCATCATTAACTCATTTTTATTTTGTTACAATCTTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACTCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAAGCCAAATTGCAAAAATCCAAGACTAACCGCAAGAGTGTTATGAAACATTTGTCTTGGTTGTTTAGTAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGTATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTAAGCATATTTTTTATCTATTCAAATAATTGTGAGAAAATTTCGAGTTTATAGTTCACTTAGTTGTCAATTCATTTAGAGGTCATACTAAATTGAATACAATCTGTTAGAGAGCCCGAGAGGAGAGTCAGGAGCATTATTGGGTGAATGCTTTAGGACCATGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGTCACGTCTCGATATATGTGTCACCTCTCTTATATATCAAACATTTTACCTATTTATAGACGATAAGAGTCTTAACCACTCACACATTTTACCCATTTATAGGTGACGTGAGACTTAACCACTCACTTAAAACCCAACAATCTCTCCCTCAAGCGAGTTCTCACCTCCTATACTTGATACAAACACTAGAAAATCCCACTTCCACTCTTCCACCGAGCCGAACCAGCACATTGCAACCACTTGTTGGGCGGTCTGTTGGAACCCCATAAACCCAAGATTCTCCCTCAAGTGAGTTCCCACCTCCTATACTTAATCCAAACACTAGAATCCCACTTCCACTCTTCCACCAAGCTGAACCAAGGCACTAATACCACTTGTTGGGGAATCTGAGGAAACATCGGGGGCAACAACGAACCAATGTTCCATAACCACAAGAGACATAGACACCACATCTCCACCCAAAACCTTAAGGCATTAGGTATATGGGTCACCTCTCTTACGGATCCAACATTTTACCTATTCATAGGCAATGTGAGACTTAATCACTCCTACTAGAAACCCAACACAAACAATATGACTCTAATATGTATCTGTTTGAATATTGAATCACAATTCATTATGATGAACCTTGATTCATTCTAATGAAACATTACTAAACTTAATGTAGTTAACAACTTTTTGGTCAATTTTGTATAACCAATCACTTCTCTTTTGTCTTTTAATATATGACTTGAATCTTGAATTATTTTGAAGTTCATATATGATATAGAAAGGTTAGCTTATAATTTTGTTATGTCACTTGATTTTTACTTAAAAATAAATTTTTATTGACAATGTAGCTTATGTTTCATAATAAGATTCGATTCACAATTCGAAAACAACATCTTCCAATTCATGATTTGAATCTTAATAGTATGCATACATTAGTCCTCCCTTTTAGTTGTATAAAAATCATTTAATAAAAATGTCAAATGGTTTTTTCTAGGTACGTTTGATGCATGGAGACATTGGAATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTTGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAATTAAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAATCCTATGTTAATCTGGGAAGAAAGGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGGTAAGTAATGATTATTTGAGAGCATTTTTTTTCATGCTTGCAAGTCTTTTGCAATATAACTTAAGCTTTATATTTTGGTCAATGTGCTTAACTTTTCCACAATGAATTGGACAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAAAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>MS.gene20850.t1

MNTGLSMALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNEGAVSCKDQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMMMIFIAILSFLFLNVGVTKREMHLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDSCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKTNRKSVMKHLSWLFSKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNELRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIKEMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM