AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20881

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20881.t1 MTR_1g086530 94.245 278 15 1 1 277 1 278 0.0 538
MS.gene20881.t1 MTR_1g086510 58.233 249 86 5 32 275 21 256 1.15e-91 272
MS.gene20881.t1 MTR_2g033170 73.571 140 37 0 26 165 18 157 1.91e-69 218
MS.gene20881.t1 MTR_4g123040 44.224 303 108 8 27 276 19 313 8.06e-69 216
MS.gene20881.t1 MTR_1g110460 56.173 162 71 0 26 187 20 181 6.59e-68 213
MS.gene20881.t1 MTR_7g035075 68.852 122 37 1 26 147 9 129 2.17e-57 183
MS.gene20881.t1 MTR_6g006030 71.930 114 31 1 26 139 9 121 4.78e-57 182
MS.gene20881.t1 MTR_1g045610 69.159 107 33 0 31 137 20 126 3.39e-51 169
MS.gene20881.t1 MTR_1g073170 65.714 105 36 0 33 137 21 125 8.41e-49 162
MS.gene20881.t1 MTR_4g063100 57.759 116 47 1 25 140 2 115 3.81e-45 153
MS.gene20881.t1 MTR_2g096380 58.716 109 45 0 32 140 6 114 4.73e-45 152
MS.gene20881.t1 MTR_8g027345 59.483 116 45 1 32 145 12 127 1.84e-43 150
MS.gene20881.t1 MTR_5g029840 52.459 122 58 0 28 149 8 129 2.24e-43 150
MS.gene20881.t1 MTR_3g052430 57.944 107 45 0 32 138 41 147 1.70e-42 152
MS.gene20881.t1 MTR_3g011610 60.185 108 43 0 30 137 35 142 2.66e-42 152
MS.gene20881.t1 MTR_3g052450 55.856 111 49 0 28 138 36 146 6.43e-42 150
MS.gene20881.t1 MTR_1g085040 55.172 116 52 0 32 147 12 127 1.21e-41 147
MS.gene20881.t1 MTR_5g007370 50.382 131 64 1 26 155 6 136 1.49e-41 145
MS.gene20881.t1 MTR_4g478180 51.163 129 62 1 28 155 9 137 1.93e-41 146
MS.gene20881.t1 MTR_7g076740 52.893 121 56 1 28 147 8 128 1.95e-41 145
MS.gene20881.t1 MTR_2g089620 56.481 108 47 0 28 135 8 115 2.63e-41 145
MS.gene20881.t1 MTR_8g042410 55.263 114 51 0 24 137 29 142 3.53e-41 149
MS.gene20881.t1 MTR_3g074520 50.000 134 66 1 28 161 8 140 4.72e-41 145
MS.gene20881.t1 MTR_1g076150 54.955 111 50 0 28 138 8 118 6.22e-41 142
MS.gene20881.t1 MTR_4g102380 53.913 115 53 0 28 142 8 122 6.69e-41 142
MS.gene20881.t1 MTR_7g117730 57.547 106 45 0 32 137 12 117 7.24e-41 142
MS.gene20881.t1 MTR_1g100653 56.075 107 47 0 32 138 12 118 9.25e-41 143
MS.gene20881.t1 MTR_4g125520 55.963 109 48 0 32 140 12 120 2.46e-40 142
MS.gene20881.t1 MTR_3g097450 60.784 102 40 0 34 135 14 115 2.61e-40 142
MS.gene20881.t1 MTR_1g021230 57.547 106 45 0 32 137 57 162 3.55e-40 145
MS.gene20881.t1 MTR_7g096930 43.791 153 82 1 28 180 8 156 4.01e-40 140
MS.gene20881.t1 MTR_2g011660 54.054 111 51 0 32 142 13 123 4.33e-40 142
MS.gene20881.t1 MTR_8g031360 39.459 185 97 2 23 192 4 188 4.88e-40 141
MS.gene20881.t1 MTR_7g011170 54.955 111 50 0 32 142 12 122 5.58e-40 141
MS.gene20881.t1 MTR_5g078140 52.174 115 55 0 28 142 8 122 6.88e-40 141
MS.gene20881.t1 MTR_3g065440 52.174 115 55 0 28 142 8 122 7.54e-40 140
MS.gene20881.t1 MTR_4g091490 53.153 111 52 0 32 142 13 123 7.89e-40 142
MS.gene20881.t1 MTR_2g097910 56.481 108 47 0 32 139 20 127 9.95e-40 140
MS.gene20881.t1 MTR_8g020490 57.009 107 46 0 32 138 8 114 1.14e-39 139
MS.gene20881.t1 MTR_5g079670 45.185 135 74 0 28 162 7 141 2.05e-39 137
MS.gene20881.t1 MTR_4g100720 56.364 110 48 0 31 140 12 121 2.20e-39 135
MS.gene20881.t1 MTR_1g062940 55.660 106 47 0 32 137 6 111 2.60e-39 137
MS.gene20881.t1 MTR_1g112760 53.153 111 52 0 32 142 13 123 3.23e-39 137
MS.gene20881.t1 MTR_1g043080 55.769 104 46 0 32 135 12 115 3.58e-39 137
MS.gene20881.t1 MTR_8g095390 52.101 119 57 0 34 152 14 132 3.68e-39 139
MS.gene20881.t1 MTR_6g012690 53.043 115 54 0 28 142 8 122 5.83e-39 139
MS.gene20881.t1 MTR_7g115650 49.550 111 56 0 28 138 8 118 7.08e-39 135
MS.gene20881.t1 MTR_1g017000 52.294 109 51 1 28 135 8 116 8.20e-39 136
MS.gene20881.t1 MTR_7g010210 43.871 155 77 2 28 172 8 162 9.13e-39 138
MS.gene20881.t1 MTR_7g110830 54.955 111 50 0 32 142 12 122 1.03e-38 139
MS.gene20881.t1 MTR_3g077110 53.153 111 52 0 32 142 12 122 1.25e-38 139
MS.gene20881.t1 MTR_4g073420 58.824 102 42 0 34 135 14 115 1.28e-38 137
MS.gene20881.t1 MTR_8g017440 54.808 104 47 0 32 135 12 115 1.34e-38 138
MS.gene20881.t1 MTR_7g010210 43.871 155 77 2 28 172 8 162 1.49e-38 136
MS.gene20881.t1 MTR_4g082230 51.695 118 57 0 32 149 12 129 1.55e-38 139
MS.gene20881.t1 MTR_2g099740 53.846 104 48 0 32 135 12 115 2.01e-38 139
MS.gene20881.t1 MTR_0008s0280 52.727 110 52 0 28 137 8 117 2.04e-38 135
MS.gene20881.t1 MTR_4g082290 51.695 118 57 0 32 149 12 129 2.08e-38 139
MS.gene20881.t1 MTR_4g065017 55.556 108 48 0 32 139 17 124 2.18e-38 137
MS.gene20881.t1 MTR_7g111290 54.310 116 53 0 32 147 12 127 2.47e-38 138
MS.gene20881.t1 MTR_4g121460 55.085 118 50 1 28 145 8 122 2.48e-38 137
MS.gene20881.t1 MTR_1g043050 45.833 144 71 2 32 175 12 148 2.59e-38 135
MS.gene20881.t1 MTR_8g098860 56.075 107 47 0 32 138 12 118 3.90e-38 136
MS.gene20881.t1 MTR_0008s0390 56.190 105 46 0 32 136 13 117 4.75e-38 135
MS.gene20881.t1 MTR_0251s0050 48.529 136 61 1 32 158 13 148 4.96e-38 135
MS.gene20881.t1 MTR_1g100667 53.043 115 53 1 33 146 14 128 7.43e-38 134
MS.gene20881.t1 MTR_3g083540 57.692 104 44 0 32 135 41 144 7.67e-38 135
MS.gene20881.t1 MTR_0008s0470 56.190 105 46 0 32 136 13 117 8.42e-38 135
MS.gene20881.t1 MTR_2g064160 52.885 104 49 0 32 135 11 114 1.32e-37 135
MS.gene20881.t1 MTR_2g088170 54.545 121 54 1 17 137 15 134 1.36e-37 138
MS.gene20881.t1 MTR_3g039990 53.704 108 50 0 32 139 13 120 1.61e-37 135
MS.gene20881.t1 MTR_4g057635 39.683 189 93 5 28 202 8 189 1.70e-37 135
MS.gene20881.t1 MTR_8g017540 52.885 104 49 0 32 135 58 161 2.16e-37 136
MS.gene20881.t1 MTR_0063s0090 48.000 125 58 1 28 152 8 125 3.03e-37 131
MS.gene20881.t1 MTR_1g085640 53.153 111 52 0 32 142 12 122 3.38e-37 135
MS.gene20881.t1 MTR_6g012180 57.282 103 44 0 28 130 8 110 3.76e-37 134
MS.gene20881.t1 MTR_0140s0030 54.630 108 49 0 28 135 9 116 4.87e-37 134
MS.gene20881.t1 MTR_0489s0020 54.630 108 49 0 28 135 9 116 4.87e-37 134
MS.gene20881.t1 MTR_7g087130 51.327 113 55 0 32 144 12 124 8.39e-37 133
MS.gene20881.t1 MTR_5g010020 57.576 99 42 0 32 130 12 110 9.22e-37 133
MS.gene20881.t1 MTR_8g017500 51.923 104 50 0 32 135 12 115 1.56e-36 133
MS.gene20881.t1 MTR_6g055910 55.340 103 46 0 33 135 15 117 1.69e-36 131
MS.gene20881.t1 MTR_3g028740 53.774 106 49 0 32 137 22 127 3.01e-36 132
MS.gene20881.t1 MTR_4g105130 53.211 109 47 1 32 136 12 120 4.41e-36 132
MS.gene20881.t1 MTR_2g089420 55.769 104 46 0 32 135 11 114 6.74e-36 133
MS.gene20881.t1 MTR_2g034790 53.509 114 50 1 32 145 12 122 7.55e-36 131
MS.gene20881.t1 MTR_6g090405 54.128 109 49 1 28 135 8 116 1.07e-35 128
MS.gene20881.t1 MTR_4g485530 41.104 163 86 3 34 195 14 167 1.10e-35 127
MS.gene20881.t1 MTR_2g095520 56.731 104 44 1 28 130 8 111 1.20e-35 130
MS.gene20881.t1 MTR_6g009430 49.565 115 58 0 28 142 8 122 1.33e-35 130
MS.gene20881.t1 MTR_1g017140 55.046 109 48 1 28 135 8 116 1.48e-35 130
MS.gene20881.t1 MTR_2g089450 53.398 103 48 0 32 134 12 114 2.18e-35 127
MS.gene20881.t1 MTR_3g103570 55.046 109 48 1 28 135 8 116 3.47e-35 129
MS.gene20881.t1 MTR_3g461490 50.450 111 55 0 32 142 12 122 3.81e-35 129
MS.gene20881.t1 MTR_5g014990 54.128 109 49 1 28 135 8 116 9.23e-35 127
MS.gene20881.t1 MTR_2g067420 51.923 104 50 0 28 131 10 113 1.43e-34 127
MS.gene20881.t1 MTR_8g017340 43.651 126 70 1 32 156 12 137 1.10e-33 128
MS.gene20881.t1 MTR_4g128670 55.769 104 45 1 28 130 8 111 1.43e-33 125
MS.gene20881.t1 MTR_8g006470 46.491 114 60 1 27 139 5 118 1.49e-33 124
MS.gene20881.t1 MTR_8g017390 50.476 105 51 1 32 135 12 116 1.99e-33 127
MS.gene20881.t1 MTR_0197s0010 47.059 119 63 0 37 155 6 124 2.62e-33 121
MS.gene20881.t1 MTR_4g097570 54.902 102 45 1 28 128 8 109 3.95e-33 122
MS.gene20881.t1 MTR_7g102110 46.032 126 67 1 28 152 8 133 4.47e-33 122
MS.gene20881.t1 MTR_8g017350 42.857 126 71 1 32 156 12 137 6.29e-33 127
MS.gene20881.t1 MTR_5g042030 46.552 116 62 0 32 147 7 122 8.39e-33 122
MS.gene20881.t1 MTR_7g109320 53.211 109 51 0 32 140 12 120 9.85e-33 123
MS.gene20881.t1 MTR_1g083630 49.091 110 56 0 28 137 8 117 1.67e-32 125
MS.gene20881.t1 MTR_4g063100 65.789 76 26 0 65 140 11 86 1.68e-32 119
MS.gene20881.t1 MTR_5g062790 46.491 114 60 1 26 138 3 116 2.37e-32 121
MS.gene20881.t1 MTR_4g097570 54.369 103 45 2 28 128 8 110 1.03e-31 119
MS.gene20881.t1 MTR_2g096380 65.789 76 26 0 65 140 20 95 1.10e-31 117
MS.gene20881.t1 MTR_8g060940 52.336 107 51 0 27 133 2 108 1.27e-31 117
MS.gene20881.t1 MTR_5g088080 48.544 103 52 1 33 134 13 115 2.07e-31 117
MS.gene20881.t1 MTR_5g088150 48.544 103 52 1 33 134 13 115 2.07e-31 117
MS.gene20881.t1 MTR_5g488210 48.544 103 52 1 33 134 13 115 2.07e-31 117
MS.gene20881.t1 MTR_5g088640 48.544 103 52 1 33 134 13 115 2.47e-31 117
MS.gene20881.t1 MTR_5g488170 49.000 100 50 1 33 131 13 112 3.43e-31 116
MS.gene20881.t1 MTR_5g079120 44.361 133 71 2 32 161 61 193 3.63e-31 118
MS.gene20881.t1 MTR_7g017260 46.032 126 65 2 13 136 7 131 8.09e-31 116
MS.gene20881.t1 MTR_0247s0040 51.429 105 51 0 28 132 3 107 2.47e-30 112
MS.gene20881.t1 MTR_5g088610 43.077 130 68 3 26 154 3 127 3.55e-30 116
MS.gene20881.t1 MTR_4g029540 46.729 107 56 1 32 137 10 116 4.39e-30 115
MS.gene20881.t1 MTR_5g079290 49.533 107 54 0 29 135 14 120 1.48e-29 112
MS.gene20881.t1 MTR_5g078950 50.476 105 52 0 28 132 3 107 1.51e-29 112
MS.gene20881.t1 MTR_5g078910 47.273 110 58 0 27 136 2 111 2.91e-29 112
MS.gene20881.t1 MTR_5g078800 47.273 110 58 0 27 136 2 111 8.77e-29 110
MS.gene20881.t1 MTR_0193s0090 38.462 156 91 2 28 183 3 153 1.26e-28 108
MS.gene20881.t1 MTR_5g079220 49.533 107 54 0 29 135 18 124 1.32e-28 110
MS.gene20881.t1 MTR_0001s0360 49.524 105 53 0 32 136 7 111 2.05e-28 109
MS.gene20881.t1 MTR_3g045430 46.429 112 60 0 31 142 12 123 7.45e-28 108
MS.gene20881.t1 MTR_5g078860 48.571 105 54 0 32 136 7 111 9.88e-28 108
MS.gene20881.t1 MTR_5g078930 41.270 126 70 1 27 148 4 129 1.30e-26 103
MS.gene20881.t1 MTR_6g055910 60.563 71 28 0 65 135 18 88 2.23e-26 104
MS.gene20881.t1 MTR_7g111290 58.333 84 35 0 64 147 2 85 2.56e-26 105
MS.gene20881.t1 MTR_1g085880 46.789 109 56 2 32 138 11 119 1.32e-25 100
MS.gene20881.t1 MTR_1g085770 46.789 109 56 2 32 138 11 119 6.20e-25 101
MS.gene20881.t1 MTR_4g128190 38.525 122 61 2 32 152 11 119 7.90e-25 99.8
MS.gene20881.t1 MTR_3g101290 46.602 103 54 1 34 136 37 138 1.14e-24 99.0
MS.gene20881.t1 MTR_4g019370 47.115 104 52 2 34 136 38 139 1.77e-24 100
MS.gene20881.t1 MTR_5g007300 41.509 106 57 1 8 108 35 140 6.55e-24 94.4
MS.gene20881.t1 MTR_5g016510 43.119 109 61 1 34 142 5 112 6.84e-24 99.0
MS.gene20881.t1 MTR_7g061330 44.118 102 56 1 34 135 113 213 7.99e-24 100
MS.gene20881.t1 MTR_7g461410 44.118 102 56 1 34 135 113 213 7.99e-24 100
MS.gene20881.t1 MTR_7g061330 44.118 102 56 1 34 135 77 177 1.25e-23 100
MS.gene20881.t1 MTR_6g015455 42.241 116 66 1 34 149 5 119 1.53e-23 100
MS.gene20881.t1 MTR_6g027340 40.187 107 61 2 34 139 16 120 2.24e-23 95.1
MS.gene20881.t1 MTR_5g049190 44.898 98 51 2 32 128 17 112 3.66e-23 95.5
MS.gene20881.t1 MTR_5g070020 34.194 155 97 3 31 182 119 271 1.59e-22 95.5
MS.gene20881.t1 MTR_6g027360 37.168 113 68 2 32 143 76 186 4.32e-22 93.6
MS.gene20881.t1 MTR_7g061550 40.909 110 63 1 37 144 10 119 4.61e-22 94.4
MS.gene20881.t1 MTR_4g105660 34.783 161 98 4 3 160 147 303 9.84e-22 94.4
MS.gene20881.t1 MTR_3g110028 40.777 103 58 2 34 135 85 185 1.57e-21 94.7
MS.gene20881.t1 MTR_4g094982 42.157 102 58 1 34 135 5 105 2.18e-21 91.3
MS.gene20881.t1 MTR_5g041570 40.566 106 60 2 34 138 134 237 4.07e-21 92.4
MS.gene20881.t1 MTR_1g057980 38.318 107 65 1 24 130 70 175 6.45e-21 90.5
MS.gene20881.t1 MTR_3g463400 37.097 124 73 3 18 140 119 238 7.21e-21 92.0
MS.gene20881.t1 MTR_1g026870 39.216 102 61 1 34 135 85 185 7.34e-21 92.8
MS.gene20881.t1 MTR_3g089045 39.316 117 68 2 23 138 5 119 1.16e-20 89.7
MS.gene20881.t1 MTR_7g037260 36.296 135 83 2 23 157 134 265 1.21e-20 90.5
MS.gene20881.t1 MTR_4g082040 39.623 106 61 2 34 138 105 208 1.47e-20 90.9
MS.gene20881.t1 MTR_6g074860 40.566 106 60 2 34 138 4 107 1.66e-20 88.2
MS.gene20881.t1 MTR_7g450950 41.237 97 56 1 34 130 157 252 5.02e-20 88.6
MS.gene20881.t1 MTR_3g077650 39.815 108 62 2 34 140 181 286 6.08e-20 89.4
MS.gene20881.t1 MTR_7g086960 39.640 111 63 3 34 143 89 196 5.01e-19 85.9
MS.gene20881.t1 MTR_7g451170 39.815 108 62 2 34 140 191 296 5.63e-19 86.3
MS.gene20881.t1 MTR_5g082910 45.263 95 51 1 34 128 19 112 6.97e-19 84.7
MS.gene20881.t1 MTR_6g027370 38.053 113 67 2 28 139 93 203 9.80e-19 85.1
MS.gene20881.t1 MTR_4g088015 35.200 125 78 2 32 155 219 341 3.74e-18 84.0
MS.gene20881.t1 MTR_7g035350 39.362 94 56 1 37 130 228 320 6.07e-18 83.6
MS.gene20881.t1 MTR_5g010650 42.105 95 54 1 34 128 110 203 9.92e-18 82.8
MS.gene20881.t1 MTR_5g038910 38.235 102 60 2 37 137 29 128 2.16e-17 82.0
MS.gene20881.t1 MTR_4g063100 64.706 51 18 0 90 140 1 51 2.81e-17 78.2
MS.gene20881.t1 MTR_5g038910 38.235 102 60 2 37 137 29 128 2.91e-17 81.3
MS.gene20881.t1 MTR_8g468380 38.261 115 65 3 37 150 25 134 1.01e-16 79.7
MS.gene20881.t1 MTR_2g096380 62.745 51 19 0 90 140 1 51 1.75e-16 75.5
MS.gene20881.t1 MTR_7g037130 32.090 134 88 2 24 157 135 265 2.99e-15 75.1
MS.gene20881.t1 MTR_0023s0210 43.210 81 46 0 28 108 3 83 3.84e-15 69.3
MS.gene20881.t1 MTR_6g055910 50.980 51 25 0 90 140 2 52 7.51e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20881.t1 AT2G47190 48.062 258 110 4 32 276 20 266 2.61e-79 241
MS.gene20881.t1 AT3G06490 76.259 139 33 0 27 165 14 152 9.24e-73 226
MS.gene20881.t1 AT1G48000 67.347 147 47 1 32 177 32 178 1.17e-72 223
MS.gene20881.t1 AT5G49620 73.759 141 37 0 27 167 21 161 6.89e-71 221
MS.gene20881.t1 AT1G68320 66.901 142 47 0 32 173 19 160 1.24e-69 217
MS.gene20881.t1 AT5G49620 67.097 155 37 1 27 167 21 175 3.93e-67 211
MS.gene20881.t1 AT1G25340 52.020 198 64 4 33 230 19 185 6.01e-65 205
MS.gene20881.t1 AT1G25340 50.000 198 63 5 33 230 19 180 2.40e-59 190
MS.gene20881.t1 AT1G25340 50.000 198 63 5 33 230 19 180 4.09e-59 191
MS.gene20881.t1 AT3G27810 71.963 107 30 0 32 138 20 126 7.40e-57 182
MS.gene20881.t1 AT3G01530 49.189 185 73 3 11 185 4 177 4.07e-56 179
MS.gene20881.t1 AT5G40350 72.816 103 28 0 32 134 17 119 9.57e-55 176
MS.gene20881.t1 AT3G24310 66.667 105 35 0 33 137 19 123 4.67e-49 164
MS.gene20881.t1 AT4G13480 66.355 107 36 0 31 137 5 111 7.05e-49 163
MS.gene20881.t1 AT5G59780 62.963 108 40 0 33 140 9 116 1.25e-47 159
MS.gene20881.t1 AT3G46130 60.714 112 44 0 33 144 10 121 2.25e-47 159
MS.gene20881.t1 AT3G30210 64.762 105 37 0 33 137 28 132 7.53e-47 158
MS.gene20881.t1 AT5G14750 51.724 145 67 2 33 175 17 160 4.41e-45 151
MS.gene20881.t1 AT5G40330 43.137 204 86 4 33 228 13 194 1.07e-44 150
MS.gene20881.t1 AT5G16770 52.273 132 61 2 32 161 12 143 9.15e-43 149
MS.gene20881.t1 AT5G16770 52.273 132 61 2 32 161 12 143 9.15e-43 149
MS.gene20881.t1 AT5G16770 52.273 132 61 2 32 161 12 143 1.62e-42 148
MS.gene20881.t1 AT5G16770 52.273 132 61 2 32 161 12 143 1.62e-42 148
MS.gene20881.t1 AT3G02940 53.279 122 57 0 28 149 8 129 1.92e-42 147
MS.gene20881.t1 AT2G32460 53.782 119 55 0 19 137 5 123 2.85e-42 151
MS.gene20881.t1 AT3G02940 53.279 122 57 0 28 149 8 129 3.17e-42 147
MS.gene20881.t1 AT3G02940 53.279 122 57 0 28 149 8 129 3.17e-42 147
MS.gene20881.t1 AT2G32460 59.434 106 43 0 32 137 6 111 4.10e-42 150
MS.gene20881.t1 AT4G12350 44.737 152 72 2 28 174 8 152 4.20e-42 146
MS.gene20881.t1 AT3G27920 63.107 103 38 0 33 135 15 117 4.78e-42 144
MS.gene20881.t1 AT1G06180 52.500 120 57 0 32 151 12 131 8.87e-42 144
MS.gene20881.t1 AT3G11440 56.075 107 47 0 31 137 40 146 9.28e-42 149
MS.gene20881.t1 AT5G65230 50.806 124 61 0 26 149 6 129 9.95e-42 145
MS.gene20881.t1 AT2G31180 56.481 108 47 0 28 135 8 115 1.44e-41 144
MS.gene20881.t1 AT5G54230 55.856 111 49 0 32 142 12 122 1.50e-41 145
MS.gene20881.t1 AT4G21440 44.304 158 77 2 32 180 12 167 2.57e-41 145
MS.gene20881.t1 AT4G05100 54.054 111 51 0 32 142 13 123 2.81e-41 145
MS.gene20881.t1 AT5G10280 52.459 122 58 0 28 149 8 129 3.14e-41 145
MS.gene20881.t1 AT1G22640 54.701 117 53 0 32 148 12 128 3.97e-41 142
MS.gene20881.t1 AT1G66230 54.783 115 52 0 28 142 8 122 4.55e-41 143
MS.gene20881.t1 AT4G26930 55.000 120 54 0 19 138 6 125 4.76e-41 146
MS.gene20881.t1 AT3G11440 56.075 107 47 0 31 137 40 146 5.56e-41 149
MS.gene20881.t1 AT3G11440 56.075 107 47 0 31 137 40 146 5.56e-41 149
MS.gene20881.t1 AT3G11440 56.075 107 47 0 31 137 40 146 5.56e-41 149
MS.gene20881.t1 AT5G55020 54.237 118 54 0 21 138 15 132 6.91e-41 148
MS.gene20881.t1 AT5G52600 60.000 105 42 0 32 136 12 116 7.88e-41 140
MS.gene20881.t1 AT5G15310 50.394 127 63 0 28 154 8 134 8.04e-41 144
MS.gene20881.t1 AT5G15310 54.783 115 52 0 28 142 8 122 9.22e-41 141
MS.gene20881.t1 AT5G15310 50.394 127 63 0 28 154 8 134 9.55e-41 143
MS.gene20881.t1 AT4G34990 61.765 102 39 0 34 135 14 115 1.04e-40 142
MS.gene20881.t1 AT5G06100 54.545 110 50 0 28 137 28 137 1.15e-40 146
MS.gene20881.t1 AT3G23250 37.879 198 101 2 28 225 8 183 1.16e-40 142
MS.gene20881.t1 AT4G28110 55.769 104 46 0 32 135 12 115 2.55e-40 141
MS.gene20881.t1 AT3G01140 51.220 123 60 0 28 150 8 130 2.62e-40 143
MS.gene20881.t1 AT4G22680 50.000 120 60 0 28 147 8 127 3.35e-40 140
MS.gene20881.t1 AT1G34670 50.000 130 64 1 32 161 12 140 4.34e-40 143
MS.gene20881.t1 AT5G06100 54.545 110 50 0 28 137 28 137 4.38e-40 145
MS.gene20881.t1 AT5G06100 54.545 110 50 0 28 137 28 137 4.38e-40 145
MS.gene20881.t1 AT5G06100 54.545 110 50 0 28 137 28 137 4.38e-40 145
MS.gene20881.t1 AT5G06100 54.545 110 50 0 28 137 28 137 4.38e-40 145
MS.gene20881.t1 AT3G47600 53.846 117 52 1 28 142 8 124 5.99e-40 142
MS.gene20881.t1 AT3G13540 53.279 122 57 0 30 151 21 142 7.44e-40 139
MS.gene20881.t1 AT3G01140 51.220 123 60 0 28 150 51 173 7.92e-40 142
MS.gene20881.t1 AT5G26660 45.139 144 79 0 32 175 12 155 1.51e-39 141
MS.gene20881.t1 AT3G53200 56.190 105 46 0 31 135 8 112 1.55e-39 138
MS.gene20881.t1 AT3G61250 49.167 120 61 0 28 147 8 127 1.58e-39 140
MS.gene20881.t1 AT1G79180 54.054 111 51 0 28 138 10 120 2.60e-39 139
MS.gene20881.t1 AT3G27810 77.027 74 17 0 65 138 4 77 3.79e-39 135
MS.gene20881.t1 AT3G13890 54.808 104 47 0 32 135 12 115 4.74e-39 140
MS.gene20881.t1 AT1G57560 56.731 104 45 0 32 135 12 115 4.96e-39 138
MS.gene20881.t1 AT1G57560 56.731 104 45 0 32 135 12 115 5.39e-39 139
MS.gene20881.t1 AT5G16600 52.174 115 55 0 28 142 8 122 6.69e-39 139
MS.gene20881.t1 AT1G09540 50.862 116 57 0 32 147 12 127 6.73e-39 140
MS.gene20881.t1 AT2G16720 58.654 104 43 0 32 135 12 115 6.82e-39 137
MS.gene20881.t1 AT4G17785 52.542 118 56 0 32 149 13 130 8.14e-39 139
MS.gene20881.t1 AT4G38620 58.824 102 42 0 34 135 14 115 8.81e-39 137
MS.gene20881.t1 AT4G17785 52.542 118 56 0 32 149 13 130 9.17e-39 139
MS.gene20881.t1 AT2G26960 50.420 119 58 1 32 150 20 137 1.69e-38 140
MS.gene20881.t1 AT4G37780 56.881 109 46 1 28 135 8 116 1.76e-38 137
MS.gene20881.t1 AT5G12870 54.630 108 49 0 32 139 18 125 2.73e-38 136
MS.gene20881.t1 AT2G47460 59.615 104 42 0 32 135 12 115 2.75e-38 138
MS.gene20881.t1 AT1G35515 56.731 104 45 0 32 135 12 115 3.21e-38 134
MS.gene20881.t1 AT1G08810 52.101 119 57 0 28 146 8 126 5.16e-38 135
MS.gene20881.t1 AT1G16490 51.852 108 52 0 28 135 10 117 5.51e-38 135
MS.gene20881.t1 AT5G62470 54.630 108 49 0 32 139 12 119 6.79e-38 137
MS.gene20881.t1 AT5G62320 48.462 130 60 1 28 150 9 138 1.27e-37 133
MS.gene20881.t1 AT5G14340 50.833 120 59 0 28 147 20 139 1.32e-37 134
MS.gene20881.t1 AT1G74650 55.046 109 49 0 32 140 12 120 1.52e-37 135
MS.gene20881.t1 AT4G09460 57.843 102 43 0 34 135 14 115 1.87e-37 132
MS.gene20881.t1 AT5G35550 51.220 123 52 2 32 146 14 136 2.95e-37 132
MS.gene20881.t1 AT3G12720 50.962 104 51 0 32 135 22 125 3.70e-37 134
MS.gene20881.t1 AT5G60890 45.255 137 74 1 32 167 12 148 3.83e-37 133
MS.gene20881.t1 AT1G63910 54.206 107 49 0 32 138 12 118 3.97e-37 135
MS.gene20881.t1 AT5G40350 78.571 70 15 0 65 134 5 74 4.18e-37 129
MS.gene20881.t1 AT3G62610 57.692 104 44 0 32 135 12 115 4.34e-37 134
MS.gene20881.t1 AT4G01680 54.717 106 48 0 32 137 12 117 8.07e-37 131
MS.gene20881.t1 AT1G18570 53.097 113 53 0 23 135 4 116 8.51e-37 134
MS.gene20881.t1 AT5G07690 54.369 103 47 0 32 134 12 114 9.08e-37 133
MS.gene20881.t1 AT3G28910 50.420 119 59 0 28 146 8 126 1.09e-36 133
MS.gene20881.t1 AT1G56160 51.852 108 52 0 28 135 10 117 2.10e-36 131
MS.gene20881.t1 AT4G01680 54.717 106 48 0 32 137 12 117 2.73e-36 132
MS.gene20881.t1 AT5G49330 54.630 108 49 0 28 135 8 115 3.97e-36 132
MS.gene20881.t1 AT3G13890 50.442 113 47 1 32 135 12 124 4.07e-36 132
MS.gene20881.t1 AT5G07700 52.885 104 49 0 32 135 12 115 4.24e-36 132
MS.gene20881.t1 AT5G07700 52.885 104 49 0 32 135 12 115 4.24e-36 132
MS.gene20881.t1 AT5G61420 51.351 111 54 0 32 142 12 122 4.92e-36 132
MS.gene20881.t1 AT5G62470 54.630 108 48 1 32 139 12 118 6.63e-36 131
MS.gene20881.t1 AT3G08500 53.774 106 49 0 32 137 30 135 1.11e-35 130
MS.gene20881.t1 AT3G28470 53.398 103 48 0 28 130 8 110 1.30e-35 130
MS.gene20881.t1 AT3G12820 50.926 108 53 0 28 135 10 117 1.68e-35 127
MS.gene20881.t1 AT5G57620 50.833 120 58 1 28 146 8 127 4.37e-35 129
MS.gene20881.t1 AT5G23000 52.294 109 51 1 28 135 8 116 4.81e-35 129
MS.gene20881.t1 AT1G74080 54.369 103 47 0 32 134 12 114 8.19e-35 128
MS.gene20881.t1 AT5G56110 50.450 111 55 0 32 142 12 122 1.15e-34 127
MS.gene20881.t1 AT3G49690 54.128 109 49 1 28 135 8 116 1.30e-34 127
MS.gene20881.t1 AT1G74430 48.276 116 60 0 32 147 12 127 1.53e-34 126
MS.gene20881.t1 AT3G46130 66.667 81 27 0 64 144 9 89 5.29e-34 123
MS.gene20881.t1 AT5G65790 53.211 109 50 1 28 135 8 116 5.88e-34 127
MS.gene20881.t1 AT5G52260 50.000 116 54 1 33 144 13 128 1.41e-33 123
MS.gene20881.t1 AT3G48920 51.961 102 49 0 33 134 19 120 1.50e-33 123
MS.gene20881.t1 AT3G46130 66.250 80 27 0 65 144 20 99 2.43e-33 122
MS.gene20881.t1 AT5G59780 68.421 76 24 0 65 140 20 95 2.69e-33 121
MS.gene20881.t1 AT4G01680 49.153 118 48 1 32 137 12 129 6.94e-33 123
MS.gene20881.t1 AT4G25560 51.456 103 50 0 33 135 11 113 8.30e-33 122
MS.gene20881.t1 AT1G79180 41.667 144 51 1 28 138 10 153 9.70e-33 122
MS.gene20881.t1 AT2G36890 51.376 109 52 1 28 135 8 116 9.79e-33 122
MS.gene20881.t1 AT2G36890 51.376 109 52 1 28 135 49 157 1.63e-32 122
MS.gene20881.t1 AT3G60460 49.541 109 54 1 32 139 11 119 1.76e-32 121
MS.gene20881.t1 AT1G18710 50.962 104 51 0 32 135 12 115 3.63e-31 117
MS.gene20881.t1 AT1G66370 49.091 110 56 0 32 141 8 117 8.74e-31 115
MS.gene20881.t1 AT3G53200 64.789 71 25 0 65 135 9 79 6.40e-29 109
MS.gene20881.t1 AT2G26950 41.026 117 65 1 22 134 2 118 1.88e-28 112
MS.gene20881.t1 AT1G56650 37.791 172 96 3 32 203 8 168 7.59e-28 107
MS.gene20881.t1 AT1G66380 50.962 104 51 0 32 135 8 111 8.34e-28 104
MS.gene20881.t1 AT5G26660 45.045 111 61 0 65 175 14 124 1.05e-26 106
MS.gene20881.t1 AT1G66390 50.962 104 51 0 32 135 8 111 2.02e-26 104
MS.gene20881.t1 AT5G35550 54.737 95 35 2 60 146 45 139 2.33e-26 104
MS.gene20881.t1 AT5G14750 64.706 68 24 0 68 135 18 85 4.54e-26 101
MS.gene20881.t1 AT4G37260 32.653 196 126 4 22 215 1 192 1.92e-24 100
MS.gene20881.t1 AT3G12820 61.765 68 26 0 68 135 2 69 1.95e-24 97.4
MS.gene20881.t1 AT3G47600 55.000 80 34 1 65 142 39 118 2.93e-24 100
MS.gene20881.t1 AT3G27785 37.405 131 74 2 32 155 187 316 4.41e-24 100
MS.gene20881.t1 AT5G02320 43.137 102 57 1 34 135 127 227 1.51e-23 100
MS.gene20881.t1 AT5G02320 43.137 102 57 1 34 135 127 227 1.51e-23 100
MS.gene20881.t1 AT5G02320 43.137 102 57 1 34 135 67 167 2.25e-23 99.4
MS.gene20881.t1 AT1G69560 41.667 108 60 2 32 138 105 210 4.27e-23 97.1
MS.gene20881.t1 AT1G69560 41.667 108 60 2 32 138 121 226 4.71e-23 97.1
MS.gene20881.t1 AT2G23290 45.098 102 55 1 34 135 13 113 6.16e-23 96.3
MS.gene20881.t1 AT3G29020 42.593 108 61 1 31 138 62 168 7.00e-23 94.4
MS.gene20881.t1 AT3G09230 50.526 95 46 1 34 128 55 148 1.05e-22 96.7
MS.gene20881.t1 AT3G29020 42.593 108 61 1 31 138 64 170 1.36e-22 95.1
MS.gene20881.t1 AT3G09370 42.718 103 58 1 34 136 135 236 1.73e-22 97.1
MS.gene20881.t1 AT3G09370 42.718 103 58 1 34 136 143 244 1.77e-22 97.1
MS.gene20881.t1 AT3G09370 42.718 103 58 1 34 136 130 231 1.78e-22 97.1
MS.gene20881.t1 AT5G11510 41.176 102 59 1 34 135 81 181 2.26e-22 97.1
MS.gene20881.t1 AT5G11510 41.176 102 59 1 34 135 81 181 2.30e-22 97.1
MS.gene20881.t1 AT5G11510 41.176 102 59 1 34 135 81 181 2.30e-22 97.1
MS.gene20881.t1 AT5G11510 41.176 102 59 1 34 135 81 181 2.30e-22 97.1
MS.gene20881.t1 AT4G18770 39.815 108 64 1 34 141 217 323 2.35e-22 95.9
MS.gene20881.t1 AT5G11510 41.176 102 59 1 34 135 81 181 2.56e-22 97.1
MS.gene20881.t1 AT1G17950 42.727 110 60 2 30 138 1 108 7.31e-22 92.0
MS.gene20881.t1 AT1G26780 39.450 109 63 2 31 138 95 201 8.98e-22 92.4
MS.gene20881.t1 AT1G26780 39.450 109 63 2 31 138 95 201 1.30e-21 93.2
MS.gene20881.t1 AT5G40360 40.816 98 57 1 31 128 155 251 1.70e-21 92.8
MS.gene20881.t1 AT2G39880 42.453 106 58 2 34 138 50 153 1.95e-21 92.8
MS.gene20881.t1 AT1G73410 41.818 110 61 2 30 138 2 109 2.89e-21 90.1
MS.gene20881.t1 AT3G55730 42.991 107 58 2 34 139 56 160 3.32e-21 92.4
MS.gene20881.t1 AT1G73410 41.818 110 61 2 30 138 2 109 5.12e-21 88.6
MS.gene20881.t1 AT5G17800 38.739 111 67 1 28 138 87 196 9.49e-21 90.5
MS.gene20881.t1 AT5G58850 39.815 108 62 2 34 140 105 210 3.54e-20 89.7
MS.gene20881.t1 AT5G11050 33.951 162 97 4 32 186 103 261 4.02e-20 89.7
MS.gene20881.t1 AT2G25230 42.424 99 56 1 32 130 24 121 4.77e-20 86.7
MS.gene20881.t1 AT4G32730 37.255 102 63 1 34 135 87 187 4.86e-20 90.1
MS.gene20881.t1 AT4G32730 37.255 102 63 1 34 135 87 187 5.13e-20 90.1
MS.gene20881.t1 AT4G32730 37.255 102 63 1 34 135 87 187 5.13e-20 90.1
MS.gene20881.t1 AT4G32730 37.255 102 63 1 34 135 87 187 5.13e-20 90.1
MS.gene20881.t1 AT4G32730 37.255 102 63 1 34 135 87 187 5.13e-20 90.1
MS.gene20881.t1 AT3G50060 43.158 95 53 1 34 128 6 99 1.01e-19 87.0
MS.gene20881.t1 AT4G33450 36.508 126 79 1 33 158 18 142 1.16e-19 86.3
MS.gene20881.t1 AT5G67300 41.176 102 59 1 34 135 6 106 1.90e-19 86.7
MS.gene20881.t1 AT1G22640 53.521 71 33 0 78 148 1 71 1.91e-19 84.3
MS.gene20881.t1 AT2G37630 39.623 106 62 1 37 140 7 112 5.43e-19 85.9
MS.gene20881.t1 AT5G14750 60.345 58 23 0 78 135 1 58 7.51e-19 81.3
MS.gene20881.t1 AT5G14750 60.345 58 23 0 78 135 1 58 7.51e-19 81.3
MS.gene20881.t1 AT3G23250 33.784 148 76 2 78 225 1 126 1.02e-18 83.2
MS.gene20881.t1 AT5G59780 66.667 51 17 0 90 140 1 51 2.13e-18 80.9
MS.gene20881.t1 AT3G46130 63.636 55 20 0 90 144 1 55 2.33e-18 81.3
MS.gene20881.t1 AT1G66380 57.746 71 30 0 65 135 8 78 3.01e-18 78.6
MS.gene20881.t1 AT1G18960 33.945 109 69 2 34 142 10 115 3.91e-17 80.1
MS.gene20881.t1 AT5G40430 42.000 100 54 3 32 130 52 148 8.73e-17 78.2
MS.gene20881.t1 AT1G71030 44.872 78 43 0 71 148 5 82 1.43e-16 76.3
MS.gene20881.t1 AT1G14350 34.677 124 72 4 37 157 28 145 1.72e-16 79.3
MS.gene20881.t1 AT1G14350 34.677 124 72 4 37 157 28 145 1.72e-16 79.3
MS.gene20881.t1 AT1G71030 44.872 78 43 0 71 148 19 96 1.80e-16 76.3
MS.gene20881.t1 AT5G39700 37.719 114 65 3 35 145 57 167 4.93e-16 74.7
MS.gene20881.t1 AT1G66380 47.436 78 41 0 32 109 8 85 7.37e-16 72.4
MS.gene20881.t1 AT4G00540 34.188 117 73 2 32 145 101 216 1.74e-15 76.3
MS.gene20881.t1 AT2G02820 34.375 128 71 3 37 156 33 155 2.04e-15 75.5
MS.gene20881.t1 AT2G02820 34.375 128 71 3 37 156 33 155 2.28e-15 75.9
MS.gene20881.t1 AT2G02820 34.375 128 71 3 37 156 33 155 2.36e-15 75.9
MS.gene20881.t1 AT4G00540 34.188 117 73 2 32 145 99 214 2.47e-15 75.9
MS.gene20881.t1 AT4G25560 56.522 46 20 0 90 135 2 47 1.87e-11 62.8
MS.gene20881.t1 AT3G18100 32.258 124 77 2 33 150 545 667 6.70e-11 63.2
MS.gene20881.t1 AT3G18100 32.258 124 77 2 33 150 497 619 7.17e-11 62.8
MS.gene20881.t1 AT3G18100 32.258 124 77 2 33 150 384 506 8.37e-11 62.8
MS.gene20881.t1 AT3G18100 32.258 124 77 2 33 150 332 454 8.68e-11 62.4

Find 66 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGCTCTGTTCAAATTCT+TGG 0.113188 1.3:-61288157 None:intergenic
AAACGTATCTTACAATTTAA+TGG 0.137838 1.3:+61288079 MS.gene20881:CDS
GAACTCCGTCGCTCGCTGTT+CGG 0.248764 1.3:+61287453 MS.gene20881:CDS
ACTCCTCATTACATGAATAT+TGG 0.277088 1.3:-61287302 None:intergenic
TTTAATGGATTGTGCGGAAC+TGG 0.299412 1.3:+61288094 MS.gene20881:CDS
GGGACACATTGCGTTTAGTA+TGG 0.307542 1.3:+61287865 MS.gene20881:CDS
AACTCCGTCGCTCGCTGTTC+GGG 0.308012 1.3:+61287454 MS.gene20881:CDS
CAAGAATCAAGACTTGTTCT+TGG 0.312108 1.3:-61287558 None:intergenic
ATGTAAACAGTCAACAGTTT+AGG 0.327525 1.3:+61287844 MS.gene20881:CDS
CTACAGTTGCACGAGAAGTT+TGG 0.332824 1.3:-61287911 None:intergenic
ATTTCATTGTCCGTTCTTCC+CGG 0.357071 1.3:-61287768 None:intergenic
ATGAGCTTTAGTATTGTTGT+AGG 0.359962 1.3:-61287967 None:intergenic
TAAAATAGCGGAACAATTAC+CGG 0.361983 1.3:+61287749 MS.gene20881:CDS
ATGTTCCCACGTCGAACATT+TGG 0.362169 1.3:-61287529 None:intergenic
TGTGGACAGATGAAAATATA+TGG 0.370670 1.3:+61288198 MS.gene20881:CDS
TTCATTCCCGTTGGGGCAAT+CGG 0.393266 1.3:+61287584 MS.gene20881:CDS
GAGGTTTCATCGTACTCGTC+AGG 0.403448 1.3:+61288035 MS.gene20881:CDS
ACAATGAAATAAAGAACTAT+TGG 0.404212 1.3:+61287781 MS.gene20881:CDS
TTCTTGATCTTCATTCCCGT+TGG 0.406689 1.3:+61287575 MS.gene20881:CDS
GGAACTGGGATCCACGTTGC+AGG 0.410029 1.3:+61288109 MS.gene20881:CDS
GGTGATTTGTCCGTGGCTAT+AGG 0.410879 1.3:-61287943 None:intergenic
TACGTACCGATTGCCCCAAC+GGG 0.417932 1.3:-61287590 None:intergenic
TCTTGATCTTCATTCCCGTT+GGG 0.419228 1.3:+61287576 MS.gene20881:CDS
AGATGTAAGTCAAGATACTA+TGG 0.432089 1.3:+61287351 MS.gene20881:CDS
TGTAAACAGTCAACAGTTTA+GGG 0.435530 1.3:+61287845 MS.gene20881:CDS
CAAGAGTGGTGAAGCAAGCT+AGG 0.457237 1.3:+61287808 MS.gene20881:CDS
TGTTCGGGTCTAAAGAGAAC+CGG 0.457348 1.3:+61287469 MS.gene20881:CDS
TATGTGGCAGTCCACGGAAA+TGG 0.474092 1.3:+61287424 MS.gene20881:CDS
GATACTATGGTGATAAAGAA+AGG 0.502153 1.3:+61287364 MS.gene20881:CDS
CTTGATCTTCATTCCCGTTG+GGG 0.504304 1.3:+61287577 MS.gene20881:CDS
AGGTTTCATCGTACTCGTCA+GGG 0.509587 1.3:+61288036 MS.gene20881:CDS
AAGCTCATAGTGAAACTTGT+GGG 0.520297 1.3:+61287982 MS.gene20881:CDS
TCCTCCCATGTTGCAGTCAG+AGG 0.529236 1.3:+61288016 MS.gene20881:CDS
GTATCCTCCTCTTCTGTCCA+TGG 0.531773 1.3:-61287388 None:intergenic
CAGTCCACGGAAATGGTCAC+TGG 0.533263 1.3:+61287431 MS.gene20881:CDS
GAAACCTCTGACTGCAACAT+GGG 0.535668 1.3:-61288020 None:intergenic
TGGGATCCACGTTGCAGGAG+TGG 0.536111 1.3:+61288114 MS.gene20881:CDS
ATACGTACCGATTGCCCCAA+CGG 0.547651 1.3:-61287591 None:intergenic
AAGCCAATATTCATGTAATG+AGG 0.554596 1.3:+61287299 MS.gene20881:CDS
TGAAACCTCTGACTGCAACA+TGG 0.560706 1.3:-61288021 None:intergenic
GGAACAATTACCGGGAAGAA+CGG 0.565767 1.3:+61287758 MS.gene20881:CDS
TTAATGGATTGTGCGGAACT+GGG 0.572101 1.3:+61288095 MS.gene20881:CDS
ATGAACTATGTGGCAGTCCA+CGG 0.572119 1.3:+61287418 MS.gene20881:CDS
GGAAAAGCTGCAGATTAAGA+TGG 0.575213 1.3:+61287491 MS.gene20881:CDS
AGCTTTAGTATTGTTGTAGG+TGG 0.582622 1.3:-61287964 None:intergenic
TTACAATTTAATGGATTGTG+CGG 0.586971 1.3:+61288088 MS.gene20881:CDS
AGGTCCATGGACAGAAGAGG+AGG 0.600682 1.3:+61287384 MS.gene20881:CDS
TGGTGATAAAGAAAGGTCCA+TGG 0.601432 1.3:+61287371 MS.gene20881:CDS
AAAATAGCGGAACAATTACC+GGG 0.602178 1.3:+61287750 MS.gene20881:CDS
ACCTCTGACTGCAACATGGG+AGG 0.606494 1.3:-61288017 None:intergenic
GTTCGGGTCTAAAGAGAACC+GGG 0.612268 1.3:+61287470 MS.gene20881:CDS
AAAGCTCATAGTGAAACTTG+TGG 0.615117 1.3:+61287981 MS.gene20881:CDS
TGGATTCTCTCGATGAGACG+TGG 0.617904 1.3:-61287891 None:intergenic
GAAAGGTCCATGGACAGAAG+AGG 0.623514 1.3:+61287381 MS.gene20881:CDS
ATGAAGGTGGTCTAAAATAG+CGG 0.627439 1.3:+61287737 MS.gene20881:intron
GGTTTCATCGTACTCGTCAG+GGG 0.629943 1.3:+61288037 MS.gene20881:CDS
GATACTAATTCCTATAGCCA+CGG 0.634352 1.3:+61287933 MS.gene20881:CDS
AGTTCCAGTGACCATTTCCG+TGG 0.634422 1.3:-61287435 None:intergenic
GAACTATTGGAGAACAAGAG+TGG 0.634570 1.3:+61287794 MS.gene20881:CDS
AGCTCATAGTGAAACTTGTG+GGG 0.647510 1.3:+61287983 MS.gene20881:CDS
TAGACCCGAACAGCGAGCGA+CGG 0.654403 1.3:-61287458 None:intergenic
TACTATTCTGATGAACTATG+TGG 0.655766 1.3:+61287408 MS.gene20881:CDS
TGTAGGTGGTGATTTGTCCG+TGG 0.667948 1.3:-61287950 None:intergenic
TTGCGTCCAAATGTTCGACG+TGG 0.681223 1.3:+61287523 MS.gene20881:CDS
TGCGTCCAAATGTTCGACGT+GGG 0.700019 1.3:+61287524 MS.gene20881:CDS
GCAGTTCCACTCCTGCAACG+TGG 0.712558 1.3:-61288120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCAATGAAATAATTGTTT+TGG + chr1.3:61287682-61287701 MS.gene20881:intron 15.0%
!! AAACGTATCTTACAATTTAA+TGG + chr1.3:61288079-61288098 MS.gene20881:CDS 20.0%
!! ACAATGAAATAAAGAACTAT+TGG + chr1.3:61287781-61287800 MS.gene20881:CDS 20.0%
!! TTTCATTGAAAAAAACAGAA+AGG - chr1.3:61287673-61287692 None:intergenic 20.0%
!!! GATATTGTGTTATTTAATGA+AGG + chr1.3:61287721-61287740 MS.gene20881:intron 20.0%
!!! ATTGTGTTATTTAATGAAGG+TGG + chr1.3:61287724-61287743 MS.gene20881:intron 25.0%
!!! TTACAATTTAATGGATTGTG+CGG + chr1.3:61288088-61288107 MS.gene20881:CDS 25.0%
AAGCCAATATTCATGTAATG+AGG + chr1.3:61287299-61287318 MS.gene20881:CDS 30.0%
ACTCCTCATTACATGAATAT+TGG - chr1.3:61287305-61287324 None:intergenic 30.0%
AGATGTAAGTCAAGATACTA+TGG + chr1.3:61287351-61287370 MS.gene20881:CDS 30.0%
ATGTAAACAGTCAACAGTTT+AGG + chr1.3:61287844-61287863 MS.gene20881:CDS 30.0%
GATACTATGGTGATAAAGAA+AGG + chr1.3:61287364-61287383 MS.gene20881:CDS 30.0%
TACTATTCTGATGAACTATG+TGG + chr1.3:61287408-61287427 MS.gene20881:CDS 30.0%
TGTAAACAGTCAACAGTTTA+GGG + chr1.3:61287845-61287864 MS.gene20881:CDS 30.0%
TGTGGACAGATGAAAATATA+TGG + chr1.3:61288198-61288217 MS.gene20881:CDS 30.0%
! ATGAGCTTTAGTATTGTTGT+AGG - chr1.3:61287970-61287989 None:intergenic 30.0%
! TAAAATAGCGGAACAATTAC+CGG + chr1.3:61287749-61287768 MS.gene20881:CDS 30.0%
! TTTGAACAGAGCAATGTTTT+TGG + chr1.3:61288164-61288183 MS.gene20881:CDS 30.0%
AAAGCTCATAGTGAAACTTG+TGG + chr1.3:61287981-61288000 MS.gene20881:CDS 35.0%
AAGCTCATAGTGAAACTTGT+GGG + chr1.3:61287982-61288001 MS.gene20881:CDS 35.0%
CATTGCTCTGTTCAAATTCT+TGG - chr1.3:61288160-61288179 None:intergenic 35.0%
GATACTAATTCCTATAGCCA+CGG + chr1.3:61287933-61287952 MS.gene20881:CDS 35.0%
TGTCATTCGTCGAATTATCA+TGG + chr1.3:61287632-61287651 MS.gene20881:intron 35.0%
! AAAATAGCGGAACAATTACC+GGG + chr1.3:61287750-61287769 MS.gene20881:CDS 35.0%
! AGCTTTAGTATTGTTGTAGG+TGG - chr1.3:61287967-61287986 None:intergenic 35.0%
! ATGAAGGTGGTCTAAAATAG+CGG + chr1.3:61287737-61287756 MS.gene20881:intron 35.0%
! CAAGAATCAAGACTTGTTCT+TGG - chr1.3:61287561-61287580 None:intergenic 35.0%
!! ATGAGGAGTTTTTCAGATTG+TGG + chr1.3:61287316-61287335 MS.gene20881:CDS 35.0%
AGCTCATAGTGAAACTTGTG+GGG + chr1.3:61287983-61288002 MS.gene20881:CDS 40.0%
ATTTCATTGTCCGTTCTTCC+CGG - chr1.3:61287771-61287790 None:intergenic 40.0%
GAACTATTGGAGAACAAGAG+TGG + chr1.3:61287794-61287813 MS.gene20881:CDS 40.0%
GGAAAAGCTGCAGATTAAGA+TGG + chr1.3:61287491-61287510 MS.gene20881:CDS 40.0%
TCTTGATCTTCATTCCCGTT+GGG + chr1.3:61287576-61287595 MS.gene20881:CDS 40.0%
TGGTGATAAAGAAAGGTCCA+TGG + chr1.3:61287371-61287390 MS.gene20881:CDS 40.0%
TTCTTGATCTTCATTCCCGT+TGG + chr1.3:61287575-61287594 MS.gene20881:CDS 40.0%
! TCTTAATCTGCAGCTTTTCC+CGG - chr1.3:61287491-61287510 None:intergenic 40.0%
!! TTAATGGATTGTGCGGAACT+GGG + chr1.3:61288095-61288114 MS.gene20881:CDS 40.0%
!! TTTAATGGATTGTGCGGAAC+TGG + chr1.3:61288094-61288113 MS.gene20881:CDS 40.0%
!! TTTTTGGTGGTTCGGAATTG+TGG + chr1.3:61288180-61288199 MS.gene20881:CDS 40.0%
!!! GAACAGAGCAATGTTTTTGG+TGG + chr1.3:61288167-61288186 MS.gene20881:CDS 40.0%
!!! GAGCAATGTTTTTGGTGGTT+CGG + chr1.3:61288172-61288191 MS.gene20881:CDS 40.0%
AGGTTTCATCGTACTCGTCA+GGG + chr1.3:61288036-61288055 MS.gene20881:CDS 45.0%
ATGAACTATGTGGCAGTCCA+CGG + chr1.3:61287418-61287437 MS.gene20881:CDS 45.0%
ATGTTCCCACGTCGAACATT+TGG - chr1.3:61287532-61287551 None:intergenic 45.0%
CTACAGTTGCACGAGAAGTT+TGG - chr1.3:61287914-61287933 None:intergenic 45.0%
CTTGATCTTCATTCCCGTTG+GGG + chr1.3:61287577-61287596 MS.gene20881:CDS 45.0%
GAAACCTCTGACTGCAACAT+GGG - chr1.3:61288023-61288042 None:intergenic 45.0%
GGAACAATTACCGGGAAGAA+CGG + chr1.3:61287758-61287777 MS.gene20881:CDS 45.0%
GGGACACATTGCGTTTAGTA+TGG + chr1.3:61287865-61287884 MS.gene20881:CDS 45.0%
TGAAACCTCTGACTGCAACA+TGG - chr1.3:61288024-61288043 None:intergenic 45.0%
TGTTCGGGTCTAAAGAGAAC+CGG + chr1.3:61287469-61287488 MS.gene20881:CDS 45.0%
TTCGACGAATGACATTGACG+TGG - chr1.3:61287626-61287645 None:intergenic 45.0%
AGTTCCAGTGACCATTTCCG+TGG - chr1.3:61287438-61287457 None:intergenic 50.0%
CAAGAGTGGTGAAGCAAGCT+AGG + chr1.3:61287808-61287827 MS.gene20881:CDS 50.0%
GAAAGGTCCATGGACAGAAG+AGG + chr1.3:61287381-61287400 MS.gene20881:CDS 50.0%
GAGGTTTCATCGTACTCGTC+AGG + chr1.3:61288035-61288054 MS.gene20881:CDS 50.0%
GGTTTCATCGTACTCGTCAG+GGG + chr1.3:61288037-61288056 MS.gene20881:CDS 50.0%
GTATCCTCCTCTTCTGTCCA+TGG - chr1.3:61287391-61287410 None:intergenic 50.0%
GTTCGGGTCTAAAGAGAACC+GGG + chr1.3:61287470-61287489 MS.gene20881:CDS 50.0%
TATGTGGCAGTCCACGGAAA+TGG + chr1.3:61287424-61287443 MS.gene20881:CDS 50.0%
TGCGTCCAAATGTTCGACGT+GGG + chr1.3:61287524-61287543 MS.gene20881:CDS 50.0%
TGGATTCTCTCGATGAGACG+TGG - chr1.3:61287894-61287913 None:intergenic 50.0%
TTCATTCCCGTTGGGGCAAT+CGG + chr1.3:61287584-61287603 MS.gene20881:CDS 50.0%
TTGCGTCCAAATGTTCGACG+TGG + chr1.3:61287523-61287542 MS.gene20881:CDS 50.0%
! GGTGATTTGTCCGTGGCTAT+AGG - chr1.3:61287946-61287965 None:intergenic 50.0%
! TGTAGGTGGTGATTTGTCCG+TGG - chr1.3:61287953-61287972 None:intergenic 50.0%
!! ATACGTACCGATTGCCCCAA+CGG - chr1.3:61287594-61287613 None:intergenic 50.0%
ACCTCTGACTGCAACATGGG+AGG - chr1.3:61288020-61288039 None:intergenic 55.0%
AGGTCCATGGACAGAAGAGG+AGG + chr1.3:61287384-61287403 MS.gene20881:CDS 55.0%
CAGTCCACGGAAATGGTCAC+TGG + chr1.3:61287431-61287450 MS.gene20881:CDS 55.0%
TCCTCCCATGTTGCAGTCAG+AGG + chr1.3:61288016-61288035 MS.gene20881:CDS 55.0%
!! TACGTACCGATTGCCCCAAC+GGG - chr1.3:61287593-61287612 None:intergenic 55.0%
AACTCCGTCGCTCGCTGTTC+GGG + chr1.3:61287454-61287473 MS.gene20881:CDS 60.0%
GAACTCCGTCGCTCGCTGTT+CGG + chr1.3:61287453-61287472 MS.gene20881:CDS 60.0%
GCAGTTCCACTCCTGCAACG+TGG - chr1.3:61288123-61288142 None:intergenic 60.0%
GGAACTGGGATCCACGTTGC+AGG + chr1.3:61288109-61288128 MS.gene20881:CDS 60.0%
TAGACCCGAACAGCGAGCGA+CGG - chr1.3:61287461-61287480 None:intergenic 60.0%
TGGGATCCACGTTGCAGGAG+TGG + chr1.3:61288114-61288133 MS.gene20881:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 61287283 61288253 61287283 ID=MS.gene20881
chr1.3 mRNA 61287283 61288253 61287283 ID=MS.gene20881.t1;Parent=MS.gene20881
chr1.3 exon 61287283 61287605 61287283 ID=MS.gene20881.t1.exon1;Parent=MS.gene20881.t1
chr1.3 CDS 61287283 61287605 61287283 ID=cds.MS.gene20881.t1;Parent=MS.gene20881.t1
chr1.3 exon 61287743 61288253 61287743 ID=MS.gene20881.t1.exon2;Parent=MS.gene20881.t1
chr1.3 CDS 61287743 61288253 61287743 ID=cds.MS.gene20881.t1;Parent=MS.gene20881.t1
Gene Sequence

>MS.gene20881

ATGGATACTAATTACAAAGCCAATATTCATGTAATGAGGAGTTTTTCAGATTGTGGTTCATCAGTAACAGATGTAAGTCAAGATACTATGGTGATAAAGAAAGGTCCATGGACAGAAGAGGAGGATACTATTCTGATGAACTATGTGGCAGTCCACGGAAATGGTCACTGGAACTCCGTCGCTCGCTGTTCGGGTCTAAAGAGAACCGGGAAAAGCTGCAGATTAAGATGGTTGAACTACTTGCGTCCAAATGTTCGACGTGGGAACATCACTCTCCAAGAACAAGTCTTGATTCTTGATCTTCATTCCCGTTGGGGCAATCGGTACGTATACATGTCAACCACGTCAATGTCATTCGTCGAATTATCATGGTCGCATTATGATATACCTTTCTGTTTTTTTCAATGAAATAATTGTTTTGGTTAAACTAACTAACATGATATTGTGTTATTTAATGAAGGTGGTCTAAAATAGCGGAACAATTACCGGGAAGAACGGACAATGAAATAAAGAACTATTGGAGAACAAGAGTGGTGAAGCAAGCTAGGCAACTAAAATGTGATGTAAACAGTCAACAGTTTAGGGACACATTGCGTTTAGTATGGATTCCACGTCTCATCGAGAGAATCCAAACTTCTCGTGCAACTGTAGATACTAATTCCTATAGCCACGGACAAATCACCACCTACAACAATACTAAAGCTCATAGTGAAACTTGTGGGGCAAATGCAAATCCTCCCATGTTGCAGTCAGAGGTTTCATCGTACTCGTCAGGGGTTGATGTTCAAGTAAAATCAAACGTATCTTACAATTTAATGGATTGTGCGGAACTGGGATCCACGTTGCAGGAGTGGAACTGCTTAGACTCAAACATCCAAGAATTTGAACAGAGCAATGTTTTTGGTGGTTCGGAATTGTGGACAGATGAAAATATATGGTTCTTGCAGCAGCAACTTGCTGATGATTTATGA
Protein sequence

>MS.gene20881.t1

MDTNYKANIHVMRSFSDCGSSVTDVSQDTMVIKKGPWTEEEDTILMNYVAVHGNGHWNSVARCSGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQVLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQARQLKCDVNSQQFRDTLRLVWIPRLIERIQTSRATVDTNSYSHGQITTYNNTKAHSETCGANANPPMLQSEVSSYSSGVDVQVKSNVSYNLMDCAELGSTLQEWNCLDSNIQEFEQSNVFGGSELWTDENIWFLQQQLADDL