Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20962.t1 | XP_003591254.1 | 96.5 | 721 | 23 | 1 | 1 | 719 | 1 | 721 | 0.00E+00 | 1264.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20962.t1 | Q0JNI9 | 41.9 | 382 | 180 | 11 | 267 | 644 | 212 | 555 | 2.6e-47 | 191.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20962.t1 | G7IAC4 | 96.5 | 721 | 23 | 1 | 1 | 719 | 1 | 721 | 0.0e+00 | 1264.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene20962.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20962.t1 | MTR_1g084980 | 96.810 | 721 | 21 | 1 | 1 | 719 | 1 | 721 | 0.0 | 1439 |
| MS.gene20962.t1 | MTR_1g084980 | 89.369 | 555 | 49 | 4 | 1 | 553 | 1 | 547 | 0.0 | 986 |
| MS.gene20962.t1 | MTR_7g111320 | 48.985 | 739 | 283 | 17 | 1 | 708 | 2 | 677 | 0.0 | 600 |
| MS.gene20962.t1 | MTR_1g069155 | 61.333 | 150 | 54 | 2 | 395 | 544 | 254 | 399 | 2.30e-43 | 165 |
| MS.gene20962.t1 | MTR_7g099540 | 57.143 | 154 | 53 | 4 | 396 | 542 | 185 | 332 | 3.64e-39 | 151 |
| MS.gene20962.t1 | MTR_7g099540 | 55.000 | 160 | 53 | 5 | 396 | 542 | 185 | 338 | 7.36e-37 | 144 |
| MS.gene20962.t1 | MTR_3g449770 | 61.654 | 133 | 39 | 5 | 425 | 557 | 276 | 396 | 2.91e-36 | 144 |
| MS.gene20962.t1 | MTR_7g110810 | 50.314 | 159 | 71 | 3 | 407 | 561 | 152 | 306 | 1.77e-33 | 132 |
| MS.gene20962.t1 | MTR_5g017040 | 50.336 | 149 | 60 | 2 | 402 | 549 | 59 | 194 | 9.10e-28 | 115 |
| MS.gene20962.t1 | MTR_1g019240 | 65.882 | 85 | 29 | 0 | 454 | 538 | 79 | 163 | 2.08e-27 | 112 |
| MS.gene20962.t1 | MTR_4g131160 | 55.405 | 74 | 29 | 1 | 462 | 531 | 198 | 271 | 8.30e-19 | 89.7 |
| MS.gene20962.t1 | MTR_4g131160 | 55.405 | 74 | 29 | 1 | 462 | 531 | 201 | 274 | 1.02e-18 | 89.4 |
| MS.gene20962.t1 | MTR_1g080890 | 52.857 | 70 | 29 | 1 | 462 | 527 | 195 | 264 | 1.77e-16 | 82.0 |
| MS.gene20962.t1 | MTR_1g017350 | 47.945 | 73 | 37 | 1 | 462 | 533 | 262 | 334 | 1.57e-15 | 79.7 |
| MS.gene20962.t1 | MTR_1g017350 | 47.945 | 73 | 37 | 1 | 462 | 533 | 262 | 334 | 1.80e-15 | 79.7 |
| MS.gene20962.t1 | MTR_1g017350 | 47.945 | 73 | 37 | 1 | 462 | 533 | 262 | 334 | 1.87e-15 | 79.7 |
| MS.gene20962.t1 | MTR_1g017350 | 47.945 | 73 | 37 | 1 | 462 | 533 | 262 | 334 | 2.08e-15 | 79.7 |
| MS.gene20962.t1 | MTR_5g005110 | 35.294 | 119 | 61 | 3 | 444 | 561 | 207 | 310 | 2.90e-15 | 78.2 |
| MS.gene20962.t1 | MTR_1g106480 | 41.176 | 85 | 32 | 2 | 477 | 561 | 86 | 152 | 1.44e-14 | 72.4 |
| MS.gene20962.t1 | MTR_8g062240 | 50.000 | 64 | 31 | 1 | 462 | 524 | 153 | 216 | 1.91e-14 | 74.7 |
| MS.gene20962.t1 | MTR_3g116770 | 45.205 | 73 | 39 | 1 | 462 | 533 | 193 | 265 | 3.04e-14 | 75.9 |
| MS.gene20962.t1 | MTR_3g116770 | 45.205 | 73 | 39 | 1 | 462 | 533 | 193 | 265 | 3.10e-14 | 75.9 |
| MS.gene20962.t1 | MTR_8g065740 | 42.105 | 95 | 47 | 3 | 462 | 548 | 307 | 401 | 5.14e-14 | 75.5 |
| MS.gene20962.t1 | MTR_5g048860 | 46.575 | 73 | 38 | 1 | 462 | 533 | 367 | 439 | 5.67e-14 | 75.9 |
| MS.gene20962.t1 | MTR_1g106470 | 36.538 | 104 | 46 | 3 | 463 | 561 | 194 | 282 | 6.43e-14 | 73.6 |
| MS.gene20962.t1 | MTR_7g053410 | 51.562 | 64 | 30 | 1 | 462 | 524 | 319 | 382 | 6.49e-14 | 75.5 |
| MS.gene20962.t1 | MTR_5g037250 | 38.583 | 127 | 63 | 5 | 409 | 524 | 55 | 177 | 6.57e-14 | 72.4 |
| MS.gene20962.t1 | MTR_7g053410 | 51.562 | 64 | 30 | 1 | 462 | 524 | 319 | 382 | 7.10e-14 | 75.5 |
| MS.gene20962.t1 | MTR_4g070320 | 45.205 | 73 | 39 | 1 | 462 | 533 | 145 | 217 | 8.06e-14 | 73.9 |
| MS.gene20962.t1 | MTR_8g012290 | 51.562 | 64 | 30 | 1 | 462 | 524 | 293 | 356 | 1.00e-13 | 74.7 |
| MS.gene20962.t1 | MTR_8g012290 | 51.562 | 64 | 30 | 1 | 462 | 524 | 293 | 356 | 1.01e-13 | 74.7 |
| MS.gene20962.t1 | MTR_3g498825 | 50.000 | 64 | 31 | 1 | 462 | 524 | 149 | 212 | 3.78e-13 | 71.6 |
| MS.gene20962.t1 | MTR_3g103030 | 36.275 | 102 | 50 | 3 | 458 | 559 | 227 | 313 | 5.57e-13 | 70.9 |
| MS.gene20962.t1 | MTR_8g099880 | 41.558 | 77 | 44 | 1 | 449 | 524 | 134 | 210 | 1.03e-12 | 70.5 |
| MS.gene20962.t1 | MTR_1g106460 | 36.047 | 86 | 40 | 2 | 476 | 561 | 254 | 324 | 1.79e-12 | 69.7 |
| MS.gene20962.t1 | MTR_7g092510 | 43.056 | 72 | 40 | 1 | 463 | 533 | 176 | 247 | 3.70e-12 | 68.9 |
| MS.gene20962.t1 | MTR_1g018090 | 45.455 | 66 | 36 | 0 | 458 | 523 | 272 | 337 | 4.23e-12 | 68.9 |
| MS.gene20962.t1 | MTR_7g039110 | 47.826 | 69 | 35 | 1 | 432 | 499 | 268 | 336 | 1.78e-11 | 66.6 |
| MS.gene20962.t1 | MTR_1g059270 | 41.429 | 70 | 40 | 1 | 463 | 531 | 163 | 232 | 1.81e-11 | 65.5 |
| MS.gene20962.t1 | MTR_1g059270 | 41.429 | 70 | 40 | 1 | 463 | 531 | 163 | 232 | 2.13e-11 | 66.2 |
| MS.gene20962.t1 | MTR_1g070870 | 50.000 | 74 | 33 | 1 | 462 | 531 | 122 | 195 | 9.54e-11 | 63.9 |
| MS.gene20962.t1 | MTR_1g070870 | 50.000 | 74 | 33 | 1 | 462 | 531 | 125 | 198 | 9.75e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20962.t1 | AT1G09530 | 35.541 | 619 | 222 | 24 | 1 | 595 | 1 | 466 | 4.93e-71 | 241 |
| MS.gene20962.t1 | AT1G09530 | 35.541 | 619 | 222 | 24 | 1 | 595 | 1 | 466 | 4.93e-71 | 241 |
| MS.gene20962.t1 | AT1G09530 | 35.541 | 619 | 222 | 24 | 1 | 595 | 1 | 466 | 4.93e-71 | 241 |
| MS.gene20962.t1 | AT1G09530 | 35.541 | 619 | 222 | 24 | 1 | 595 | 1 | 466 | 4.93e-71 | 241 |
| MS.gene20962.t1 | AT1G09530 | 35.541 | 619 | 222 | 24 | 1 | 595 | 1 | 466 | 4.93e-71 | 241 |
| MS.gene20962.t1 | AT1G09530 | 35.541 | 619 | 222 | 24 | 1 | 595 | 1 | 466 | 4.93e-71 | 241 |
| MS.gene20962.t1 | AT2G46970 | 46.193 | 197 | 78 | 7 | 395 | 576 | 127 | 310 | 1.43e-34 | 136 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 153 | 311 | 1.43e-34 | 137 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 153 | 311 | 1.43e-34 | 137 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 153 | 311 | 1.43e-34 | 137 |
| MS.gene20962.t1 | AT2G46970 | 46.193 | 197 | 78 | 7 | 395 | 576 | 158 | 341 | 1.84e-34 | 136 |
| MS.gene20962.t1 | AT2G46970 | 46.193 | 197 | 78 | 7 | 395 | 576 | 136 | 319 | 2.23e-34 | 135 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 224 | 382 | 6.43e-34 | 136 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 224 | 382 | 6.43e-34 | 136 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 224 | 382 | 6.43e-34 | 136 |
| MS.gene20962.t1 | AT2G20180 | 47.458 | 177 | 72 | 5 | 399 | 572 | 224 | 382 | 6.43e-34 | 136 |
| MS.gene20962.t1 | AT2G20180 | 52.381 | 126 | 47 | 3 | 399 | 521 | 224 | 339 | 2.14e-29 | 120 |
| MS.gene20962.t1 | AT4G28800 | 43.827 | 162 | 67 | 5 | 392 | 548 | 193 | 335 | 1.78e-27 | 116 |
| MS.gene20962.t1 | AT4G28790 | 43.709 | 151 | 65 | 4 | 421 | 564 | 244 | 381 | 1.07e-26 | 114 |
| MS.gene20962.t1 | AT4G36930 | 58.772 | 114 | 41 | 2 | 432 | 541 | 161 | 272 | 1.52e-26 | 112 |
| MS.gene20962.t1 | AT4G00050 | 59.140 | 93 | 34 | 2 | 432 | 523 | 79 | 168 | 3.00e-26 | 110 |
| MS.gene20962.t1 | AT4G00050 | 59.140 | 93 | 34 | 2 | 432 | 523 | 181 | 270 | 1.29e-25 | 110 |
| MS.gene20962.t1 | AT4G00050 | 59.140 | 93 | 34 | 2 | 432 | 523 | 181 | 270 | 1.41e-25 | 110 |
| MS.gene20962.t1 | AT5G67110 | 54.639 | 97 | 44 | 0 | 440 | 536 | 67 | 163 | 1.73e-24 | 102 |
| MS.gene20962.t1 | AT3G59060 | 47.552 | 143 | 60 | 3 | 425 | 555 | 212 | 351 | 2.96e-23 | 103 |
| MS.gene20962.t1 | AT3G59060 | 47.552 | 143 | 60 | 3 | 425 | 555 | 212 | 351 | 3.40e-23 | 103 |
| MS.gene20962.t1 | AT3G59060 | 47.552 | 143 | 60 | 3 | 425 | 555 | 212 | 351 | 3.40e-23 | 103 |
| MS.gene20962.t1 | AT3G59060 | 47.552 | 143 | 60 | 3 | 425 | 555 | 212 | 351 | 3.40e-23 | 103 |
| MS.gene20962.t1 | AT3G62090 | 46.341 | 123 | 48 | 2 | 460 | 573 | 165 | 278 | 4.96e-23 | 101 |
| MS.gene20962.t1 | AT4G28800 | 41.358 | 162 | 65 | 6 | 392 | 548 | 205 | 341 | 5.28e-23 | 103 |
| MS.gene20962.t1 | AT3G62090 | 46.341 | 123 | 48 | 2 | 460 | 573 | 182 | 295 | 1.14e-22 | 100 |
| MS.gene20962.t1 | AT4G28815 | 52.222 | 90 | 40 | 2 | 456 | 542 | 64 | 153 | 3.13e-22 | 96.7 |
| MS.gene20962.t1 | AT4G28815 | 48.958 | 96 | 46 | 2 | 450 | 542 | 134 | 229 | 1.89e-21 | 96.3 |
| MS.gene20962.t1 | AT2G43010 | 66.667 | 81 | 24 | 1 | 445 | 522 | 233 | 313 | 1.12e-20 | 95.9 |
| MS.gene20962.t1 | AT2G43010 | 66.667 | 81 | 24 | 1 | 445 | 522 | 233 | 313 | 1.18e-20 | 95.9 |
| MS.gene20962.t1 | AT2G43010 | 66.667 | 81 | 24 | 1 | 445 | 522 | 233 | 313 | 1.26e-20 | 95.5 |
| MS.gene20962.t1 | AT2G43010 | 66.667 | 81 | 24 | 1 | 445 | 522 | 240 | 320 | 1.42e-20 | 95.5 |
| MS.gene20962.t1 | AT2G43010 | 66.667 | 81 | 24 | 1 | 445 | 522 | 275 | 355 | 2.25e-20 | 95.5 |
| MS.gene20962.t1 | AT4G28790 | 48.000 | 100 | 40 | 2 | 421 | 520 | 244 | 331 | 8.72e-20 | 92.0 |
| MS.gene20962.t1 | AT2G24260 | 60.317 | 63 | 25 | 0 | 462 | 524 | 37 | 99 | 1.70e-19 | 89.0 |
| MS.gene20962.t1 | AT5G58010 | 53.947 | 76 | 31 | 1 | 462 | 533 | 101 | 176 | 3.39e-19 | 89.4 |
| MS.gene20962.t1 | AT2G24260 | 60.317 | 63 | 25 | 0 | 462 | 524 | 140 | 202 | 6.92e-19 | 89.4 |
| MS.gene20962.t1 | AT4G30980 | 58.730 | 63 | 26 | 0 | 462 | 524 | 132 | 194 | 1.38e-18 | 87.8 |
| MS.gene20962.t1 | AT5G61270 | 48.246 | 114 | 48 | 3 | 423 | 536 | 45 | 147 | 2.98e-18 | 86.3 |
| MS.gene20962.t1 | AT5G61270 | 48.246 | 114 | 48 | 3 | 423 | 536 | 45 | 147 | 2.98e-18 | 86.3 |
| MS.gene20962.t1 | AT4G30980 | 58.730 | 63 | 26 | 0 | 462 | 524 | 180 | 242 | 3.28e-18 | 87.4 |
| MS.gene20962.t1 | AT5G61270 | 48.246 | 114 | 48 | 3 | 423 | 536 | 133 | 235 | 5.27e-18 | 87.0 |
| MS.gene20962.t1 | AT4G28811 | 41.916 | 167 | 72 | 5 | 392 | 545 | 292 | 446 | 8.92e-17 | 84.7 |
| MS.gene20962.t1 | AT1G68920 | 31.795 | 195 | 103 | 6 | 357 | 533 | 195 | 377 | 2.65e-15 | 79.7 |
| MS.gene20962.t1 | AT1G68920 | 31.795 | 195 | 103 | 6 | 357 | 533 | 195 | 377 | 2.65e-15 | 79.7 |
| MS.gene20962.t1 | AT1G68920 | 31.795 | 195 | 103 | 6 | 357 | 533 | 195 | 377 | 2.65e-15 | 79.7 |
| MS.gene20962.t1 | AT1G68920 | 49.315 | 73 | 36 | 1 | 462 | 533 | 304 | 376 | 3.09e-15 | 79.3 |
| MS.gene20962.t1 | AT5G50915 | 53.125 | 64 | 29 | 1 | 462 | 524 | 138 | 201 | 3.63e-15 | 76.6 |
| MS.gene20962.t1 | AT5G50915 | 53.125 | 64 | 29 | 1 | 462 | 524 | 138 | 201 | 3.63e-15 | 76.6 |
| MS.gene20962.t1 | AT1G10120 | 47.945 | 73 | 37 | 1 | 462 | 533 | 208 | 280 | 4.43e-15 | 78.2 |
| MS.gene20962.t1 | AT1G10120 | 47.945 | 73 | 37 | 1 | 462 | 533 | 208 | 280 | 4.43e-15 | 78.2 |
| MS.gene20962.t1 | AT5G50915 | 53.125 | 64 | 29 | 1 | 462 | 524 | 138 | 201 | 5.13e-15 | 76.6 |
| MS.gene20962.t1 | AT5G50915 | 53.125 | 64 | 29 | 1 | 462 | 524 | 138 | 201 | 5.13e-15 | 76.6 |
| MS.gene20962.t1 | AT1G02340 | 47.727 | 88 | 44 | 2 | 474 | 559 | 134 | 221 | 8.60e-15 | 75.9 |
| MS.gene20962.t1 | AT1G02340 | 47.727 | 88 | 44 | 2 | 474 | 559 | 141 | 228 | 9.90e-15 | 75.9 |
| MS.gene20962.t1 | AT2G18300 | 45.333 | 75 | 40 | 1 | 462 | 535 | 187 | 261 | 1.99e-14 | 75.9 |
| MS.gene20962.t1 | AT2G18300 | 45.333 | 75 | 40 | 1 | 462 | 535 | 187 | 261 | 2.09e-14 | 75.5 |
| MS.gene20962.t1 | AT3G23690 | 44.156 | 77 | 42 | 1 | 462 | 537 | 193 | 269 | 2.13e-14 | 75.9 |
| MS.gene20962.t1 | AT4G36540 | 45.205 | 73 | 39 | 1 | 462 | 533 | 143 | 215 | 2.76e-14 | 74.7 |
| MS.gene20962.t1 | AT2G18300 | 44.156 | 77 | 42 | 1 | 462 | 537 | 187 | 263 | 2.79e-14 | 75.5 |
| MS.gene20962.t1 | AT4G36540 | 45.205 | 73 | 39 | 1 | 462 | 533 | 143 | 215 | 2.88e-14 | 74.7 |
| MS.gene20962.t1 | AT5G62610 | 51.562 | 64 | 30 | 1 | 462 | 524 | 155 | 218 | 4.10e-14 | 73.9 |
| MS.gene20962.t1 | AT5G62610 | 51.562 | 64 | 30 | 1 | 462 | 524 | 155 | 218 | 4.10e-14 | 73.9 |
| MS.gene20962.t1 | AT1G59640 | 50.000 | 64 | 31 | 1 | 462 | 524 | 138 | 201 | 5.49e-14 | 73.2 |
| MS.gene20962.t1 | AT3G07340 | 51.562 | 64 | 30 | 1 | 462 | 524 | 260 | 323 | 5.74e-14 | 75.1 |
| MS.gene20962.t1 | AT2G14760 | 38.462 | 104 | 49 | 3 | 458 | 561 | 235 | 323 | 5.82e-14 | 74.3 |
| MS.gene20962.t1 | AT3G07340 | 51.562 | 64 | 30 | 1 | 462 | 524 | 260 | 323 | 7.20e-14 | 75.1 |
| MS.gene20962.t1 | AT2G14760 | 37.931 | 116 | 51 | 4 | 452 | 561 | 236 | 336 | 7.23e-14 | 73.9 |
| MS.gene20962.t1 | AT5G48560 | 51.562 | 64 | 30 | 1 | 462 | 524 | 303 | 366 | 1.01e-13 | 74.7 |
| MS.gene20962.t1 | AT5G48560 | 51.562 | 64 | 30 | 1 | 462 | 524 | 303 | 366 | 1.25e-13 | 74.3 |
| MS.gene20962.t1 | AT4G33880 | 40.000 | 100 | 45 | 3 | 458 | 557 | 264 | 348 | 1.31e-13 | 73.6 |
| MS.gene20962.t1 | AT4G34530 | 41.667 | 72 | 41 | 1 | 462 | 532 | 174 | 245 | 1.67e-13 | 72.8 |
| MS.gene20962.t1 | AT1G26260 | 48.438 | 64 | 32 | 1 | 462 | 524 | 174 | 237 | 2.80e-13 | 72.4 |
| MS.gene20962.t1 | AT5G43175 | 41.250 | 80 | 39 | 2 | 451 | 530 | 130 | 201 | 2.83e-13 | 70.1 |
| MS.gene20962.t1 | AT1G26260 | 48.438 | 64 | 32 | 1 | 462 | 524 | 203 | 266 | 2.85e-13 | 72.4 |
| MS.gene20962.t1 | AT2G42300 | 43.836 | 73 | 40 | 1 | 462 | 533 | 187 | 259 | 3.07e-13 | 71.2 |
| MS.gene20962.t1 | AT1G26260 | 48.438 | 64 | 32 | 1 | 462 | 524 | 225 | 288 | 3.27e-13 | 72.4 |
| MS.gene20962.t1 | AT1G26260 | 48.438 | 64 | 32 | 1 | 462 | 524 | 225 | 288 | 3.27e-13 | 72.4 |
| MS.gene20962.t1 | AT1G26260 | 48.438 | 64 | 32 | 1 | 462 | 524 | 225 | 288 | 3.27e-13 | 72.4 |
| MS.gene20962.t1 | AT1G26260 | 48.438 | 64 | 32 | 1 | 462 | 524 | 225 | 288 | 3.27e-13 | 72.4 |
| MS.gene20962.t1 | AT1G59640 | 50.000 | 64 | 31 | 1 | 462 | 524 | 138 | 201 | 3.57e-13 | 72.0 |
| MS.gene20962.t1 | AT2G42300 | 43.836 | 73 | 40 | 1 | 462 | 533 | 187 | 259 | 5.44e-13 | 71.2 |
| MS.gene20962.t1 | AT1G27740 | 36.066 | 122 | 58 | 5 | 440 | 561 | 152 | 253 | 5.54e-13 | 70.1 |
| MS.gene20962.t1 | AT3G57800 | 42.466 | 73 | 41 | 1 | 462 | 533 | 206 | 278 | 1.86e-12 | 70.1 |
| MS.gene20962.t1 | AT1G18400 | 46.875 | 64 | 33 | 1 | 462 | 524 | 147 | 210 | 2.14e-12 | 68.2 |
| MS.gene20962.t1 | AT1G18400 | 46.875 | 64 | 33 | 1 | 462 | 524 | 147 | 210 | 2.60e-12 | 68.2 |
| MS.gene20962.t1 | AT1G25330 | 45.312 | 64 | 34 | 1 | 462 | 524 | 106 | 169 | 4.10e-12 | 67.0 |
| MS.gene20962.t1 | AT1G73830 | 43.750 | 64 | 35 | 1 | 462 | 524 | 149 | 212 | 1.10e-11 | 66.2 |
| MS.gene20962.t1 | AT1G73830 | 43.750 | 64 | 35 | 1 | 462 | 524 | 149 | 212 | 1.15e-11 | 66.2 |
Find 190 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAATGGGAATCAGATATTT+AGG | 0.178802 | 1.3:+60420611 | MS.gene20962:CDS |
| CAACCTTCCATTCAAGTTCT+TGG | 0.207186 | 1.3:+60421276 | MS.gene20962:CDS |
| TCACCAAACTTTCCTATCTT+TGG | 0.207484 | 1.3:-60420403 | None:intergenic |
| TGAATCAGTGGGAGTTAAAA+AGG | 0.229978 | 1.3:+60421560 | MS.gene20962:CDS |
| TACTCAAGGGTTTGGACTTC+CGG | 0.238298 | 1.3:+60422652 | MS.gene20962:CDS |
| GGACACACAGCTGCTGAAAA+AGG | 0.246020 | 1.3:+60421315 | MS.gene20962:CDS |
| TTCAGCAGCACGGCTTCTTT+TGG | 0.263273 | 1.3:-60421610 | None:intergenic |
| TAGCTGCAGGCCTTGCAAAA+TGG | 0.265088 | 1.3:-60420954 | None:intergenic |
| GAACCATTGCCAGGCATTAT+AGG | 0.273673 | 1.3:-60420913 | None:intergenic |
| GGCTCTTTGCAACACGAATA+TGG | 0.299730 | 1.3:+60420514 | MS.gene20962:CDS |
| ACCTTATGACAGCGCATTTC+CGG | 0.308325 | 1.3:-60421138 | None:intergenic |
| AAACTAACCTTATTGCAATT+AGG | 0.311300 | 1.3:-60421816 | None:intergenic |
| GCATTTGGTTCAAGCAATTT+CGG | 0.321748 | 1.3:-60421198 | None:intergenic |
| ATTATTAACTTACTTCACTA+TGG | 0.325057 | 1.3:-60421455 | None:intergenic |
| AGAACCGATGAATGTTTCTA+AGG | 0.325663 | 1.3:+60420654 | MS.gene20962:CDS |
| TTCCGTTTCAAATCTCGATT+TGG | 0.325821 | 1.3:-60421405 | None:intergenic |
| CATCTGTAACTGTTAGATCT+AGG | 0.327984 | 1.3:+60420767 | MS.gene20962:CDS |
| GGTAACCAGGACGTGCCTTA+TGG | 0.332319 | 1.3:+60420826 | MS.gene20962:CDS |
| AGCTGCAGGCCTTGCAAAAT+GGG | 0.334857 | 1.3:-60420953 | None:intergenic |
| AGGGATAAACAGACCTGGTT+AGG | 0.337445 | 1.3:-60422893 | None:intergenic |
| ATAAGAGGCCCTCCTGAAAA+AGG | 0.349955 | 1.3:-60422716 | None:intergenic |
| ACTCAAGGGTTTGGACTTCC+GGG | 0.350946 | 1.3:+60422653 | MS.gene20962:CDS |
| AATCCAAAGATAGGAAAGTT+TGG | 0.360484 | 1.3:+60420400 | MS.gene20962:CDS |
| TAAGGGTTCTTCAGCTGAAC+AGG | 0.362772 | 1.3:+60420672 | MS.gene20962:CDS |
| GCCTCTTCTTCTGTTTGCTC+TGG | 0.374903 | 1.3:+60421354 | MS.gene20962:CDS |
| AGTAATAACAATCCAAAGAT+AGG | 0.377772 | 1.3:+60420391 | MS.gene20962:CDS |
| TCTTTATGAGTTATACCGTT+TGG | 0.379797 | 1.3:+60420008 | MS.gene20962:CDS |
| ATGGGGTTAGGTATGGGTTA+TGG | 0.384832 | 1.3:+60422497 | MS.gene20962:CDS |
| CATGCCAATGCCGCATGCTC+CGG | 0.385852 | 1.3:+60422688 | MS.gene20962:CDS |
| ATCTGAGGTACTTGAATCAT+TGG | 0.390961 | 1.3:-60422560 | None:intergenic |
| GTAACCAGGACGTGCCTTAT+GGG | 0.391349 | 1.3:+60420827 | MS.gene20962:CDS |
| CATGCATATGGGGTTAGGTA+TGG | 0.391760 | 1.3:+60422490 | MS.gene20962:CDS |
| TTAATTTGTGAGTCCACATC+TGG | 0.393466 | 1.3:-60422833 | None:intergenic |
| ACTCATACCTAATTGCAATA+AGG | 0.396247 | 1.3:+60421809 | MS.gene20962:CDS |
| GATGGGCATCGGCATGCATA+TGG | 0.396774 | 1.3:+60422478 | MS.gene20962:CDS |
| TGTTTAGTAGCTACAGCATT+TGG | 0.397325 | 1.3:-60421213 | None:intergenic |
| GTTATAGGAGTTAAGAATAA+AGG | 0.400952 | 1.3:+60421045 | MS.gene20962:CDS |
| TGACAGTGAAGCTGCTAATC+CGG | 0.402149 | 1.3:+60423097 | MS.gene20962:CDS |
| GCGGCTGGACGAGGAGTTGC+AGG | 0.404515 | 1.3:+60421585 | MS.gene20962:CDS |
| TCCTTTGAACACTCACCGCT+TGG | 0.414948 | 1.3:-60421114 | None:intergenic |
| CAGTCAACTTTGGTGCATAA+TGG | 0.417435 | 1.3:+60423053 | MS.gene20962:intron |
| AGATCGAATACTCAAGGGTT+TGG | 0.418683 | 1.3:+60422644 | MS.gene20962:CDS |
| AATGCCGGAGCATGCGGCAT+TGG | 0.422731 | 1.3:-60422692 | None:intergenic |
| TCAGCAAGATCAGATGTTAT+AGG | 0.425064 | 1.3:+60421030 | MS.gene20962:CDS |
| AACAGACCTGGTTAGGGATC+TGG | 0.426475 | 1.3:-60422886 | None:intergenic |
| GAATGATATTTACTTGAACT+TGG | 0.428430 | 1.3:-60422285 | None:intergenic |
| CGGTGAGTGTTCAAAGGAAC+CGG | 0.431291 | 1.3:+60421119 | MS.gene20962:CDS |
| TACCTCTACTTGATTGACCT+TGG | 0.431493 | 1.3:-60420279 | None:intergenic |
| GCTCCGGGTCCGTCTGTGTA+TGG | 0.432008 | 1.3:+60422749 | MS.gene20962:CDS |
| TCTTCTGTTTGCTCTGGCAA+TGG | 0.432421 | 1.3:+60421360 | MS.gene20962:CDS |
| TTTGAGCTGGTTTGGGAGAG+TGG | 0.433011 | 1.3:+60420244 | MS.gene20962:CDS |
| GGTCCAGGCATATGCGCAAC+GGG | 0.433702 | 1.3:-60422599 | None:intergenic |
| AGGGTTTGGACTTCCGGGAC+AGG | 0.436904 | 1.3:+60422658 | MS.gene20962:CDS |
| GACGGCCCGCCGTTCATGTC+AGG | 0.437600 | 1.3:-60422530 | None:intergenic |
| CAGAACATAGGCTTGAAGTC+TGG | 0.440984 | 1.3:+60420994 | MS.gene20962:CDS |
| TCGCGAGATGGCACCGACAT+TGG | 0.449982 | 1.3:-60420451 | None:intergenic |
| CTTGGTGACAATGGCGCTAA+AGG | 0.455067 | 1.3:+60421294 | MS.gene20962:CDS |
| ATGCCCGTTGCGCATATGCC+TGG | 0.457121 | 1.3:+60422596 | MS.gene20962:CDS |
| ACCGGAAATGCGCTGTCATA+AGG | 0.458097 | 1.3:+60421137 | MS.gene20962:CDS |
| TAATGGGAATCAGATATTTA+GGG | 0.459406 | 1.3:+60420612 | MS.gene20962:CDS |
| GGATTAACAAGAGCTGAATC+AGG | 0.461722 | 1.3:-60421093 | None:intergenic |
| TTAGGTATGGGTTATGGAAT+GGG | 0.462375 | 1.3:+60422503 | MS.gene20962:CDS |
| AAGTTTGGTGATTTAGACTC+TGG | 0.465005 | 1.3:+60420415 | MS.gene20962:CDS |
| ATTACATTGGAACCATTGCC+AGG | 0.465626 | 1.3:-60420922 | None:intergenic |
| TGGATTTAAACAGTCAACTT+TGG | 0.465882 | 1.3:+60423043 | MS.gene20962:intron |
| ATGGGCATCGGCATGCATAT+GGG | 0.467830 | 1.3:+60422479 | MS.gene20962:CDS |
| GTAGAAAGAGTCCATCTTGT+AGG | 0.469763 | 1.3:+60420299 | MS.gene20962:CDS |
| ACATGTTGAAGCTGTGAATC+CGG | 0.471250 | 1.3:+60422781 | MS.gene20962:CDS |
| GCCTTGGTTGGATTATTCAA+TGG | 0.473067 | 1.3:+60420489 | MS.gene20962:CDS |
| ATTCCATTCTCTTTGCAAGC+AGG | 0.474924 | 1.3:-60421243 | None:intergenic |
| TCTTATGAACTCATCCGCTC+CGG | 0.478517 | 1.3:+60422733 | MS.gene20962:CDS |
| AATCACAAATTTATATTGCC+CGG | 0.480981 | 1.3:-60423116 | None:intergenic |
| TGGTTGGATTATTCAATGGA+TGG | 0.481215 | 1.3:+60420493 | MS.gene20962:CDS |
| CAAAGGTTTCAAATCAGCCT+TGG | 0.482518 | 1.3:-60421172 | None:intergenic |
| CAATAGAGTAAAACTATTTG+AGG | 0.483612 | 1.3:-60420578 | None:intergenic |
| CCAGCAGGTAACATCATTTG+AGG | 0.491436 | 1.3:-60422413 | None:intergenic |
| CTCCTCCTACGTCTTTATCT+CGG | 0.494789 | 1.3:-60420363 | None:intergenic |
| ATGCATATGGGGTTAGGTAT+GGG | 0.501740 | 1.3:+60422491 | MS.gene20962:CDS |
| ATTGTCACCAAGAACTTGAA+TGG | 0.502299 | 1.3:-60421283 | None:intergenic |
| ATCCAAATCGAGATTTGAAA+CGG | 0.502394 | 1.3:+60421403 | MS.gene20962:CDS |
| TTTGAGCCACACGCTGAAGC+CGG | 0.503540 | 1.3:-60422800 | None:intergenic |
| CAAATTAAGCAAAACACTGC+TGG | 0.508355 | 1.3:+60422848 | MS.gene20962:CDS |
| GACAGTGAAGCTGCTAATCC+GGG | 0.512717 | 1.3:+60423098 | MS.gene20962:CDS |
| AAGCCTGCTTGCAAAGAGAA+TGG | 0.512967 | 1.3:+60421240 | MS.gene20962:CDS |
| GTTTGACATTGATTCGATGA+TGG | 0.513871 | 1.3:-60420742 | None:intergenic |
| ATCGGCATGCATATGGGGTT+AGG | 0.513942 | 1.3:+60422485 | MS.gene20962:CDS |
| CTTATGAACTCATCCGCTCC+GGG | 0.516950 | 1.3:+60422734 | MS.gene20962:CDS |
| CCTCAAATGATGTTACCTGC+TGG | 0.519335 | 1.3:+60422413 | MS.gene20962:CDS |
| ACGTCTTTATCTCGGCCTCT+AGG | 0.520038 | 1.3:-60420355 | None:intergenic |
| ATCTGTAACTGTTAGATCTA+GGG | 0.521505 | 1.3:+60420768 | MS.gene20962:CDS |
| GGTGGATAAAGCTTCTATGC+TGG | 0.522318 | 1.3:+60422228 | MS.gene20962:intron |
| CGGAGCATGCGGCATTGGCA+TGG | 0.522967 | 1.3:-60422687 | None:intergenic |
| TCAAGCAATTTCGGCTGCAA+AGG | 0.523909 | 1.3:-60421189 | None:intergenic |
| TGATTTCTTTCATGAACTCA+CGG | 0.530210 | 1.3:+60420540 | MS.gene20962:CDS |
| AAACGGTATAACTCATAAAG+AGG | 0.530629 | 1.3:-60420006 | None:intergenic |
| GGAGCGGATGAGTTCATAAG+AGG | 0.531123 | 1.3:-60422731 | None:intergenic |
| GGCATGGAAATTCCCTGTCC+CGG | 0.531882 | 1.3:-60422671 | None:intergenic |
| GGGTTTGGACTTCCGGGACA+GGG | 0.531895 | 1.3:+60422659 | MS.gene20962:CDS |
| TCTTACGCAGATGATGTCAA+TGG | 0.532008 | 1.3:+60422373 | MS.gene20962:intron |
| TCACCAAGAACTTGAATGGA+AGG | 0.535249 | 1.3:-60421279 | None:intergenic |
| GGGATAAACAGACCTGGTTA+GGG | 0.536075 | 1.3:-60422892 | None:intergenic |
| GTTAGGTATGGGTTATGGAA+TGG | 0.536992 | 1.3:+60422502 | MS.gene20962:CDS |
| GCCAGAGCAAACAGAAGAAG+AGG | 0.539271 | 1.3:-60421355 | None:intergenic |
| AAGCAAGATCCTATAATGCC+TGG | 0.540589 | 1.3:+60420904 | MS.gene20962:CDS |
| TGCATGTGCTGCATTCCAGC+AGG | 0.541526 | 1.3:-60422428 | None:intergenic |
| GTATACAGAGGCGAAGAGAC+AGG | 0.541533 | 1.3:+60421757 | MS.gene20962:intron |
| TTAGCTCTCACAATAGCTGC+AGG | 0.542020 | 1.3:-60420967 | None:intergenic |
| AGAGTAAAACTATTTGAGGC+AGG | 0.545061 | 1.3:-60420574 | None:intergenic |
| GTGAATCCGGCTTCAGCGTG+TGG | 0.545306 | 1.3:+60422794 | MS.gene20962:CDS |
| AGATGAAATGATGCCTTGGT+TGG | 0.547275 | 1.3:+60420477 | MS.gene20962:CDS |
| ACTTTAATTGAAGGATGTTG+AGG | 0.547453 | 1.3:+60421536 | MS.gene20962:intron |
| CCGTCTGTGTATGGATCCAC+AGG | 0.548020 | 1.3:+60422758 | MS.gene20962:CDS |
| GGTTTCAAATCAGCCTTGGA+TGG | 0.548035 | 1.3:-60421168 | None:intergenic |
| TATCCCCATAAGGCACGTCC+TGG | 0.548638 | 1.3:-60420831 | None:intergenic |
| TAATGTTAGCAGTGGTAACC+AGG | 0.548677 | 1.3:+60420813 | MS.gene20962:CDS |
| AAACCCTTGAGTATTCGATC+TGG | 0.548724 | 1.3:-60422642 | None:intergenic |
| AGTGCATAATCTATCTGAAA+GGG | 0.548993 | 1.3:+60421632 | MS.gene20962:CDS |
| GCACATGCATGCACCACACA+TGG | 0.551028 | 1.3:+60422442 | MS.gene20962:CDS |
| GACTAACGGCGCAAGTGTAG+CGG | 0.551051 | 1.3:+60420053 | MS.gene20962:CDS |
| CCTGGACCCTCTGCTATGCA+TGG | 0.553478 | 1.3:+60422614 | MS.gene20962:CDS |
| GAATGCCTGACATGAACGGC+GGG | 0.554517 | 1.3:+60422525 | MS.gene20962:CDS |
| CGAGATAAAGACGTAGGAGG+AGG | 0.554717 | 1.3:+60420364 | MS.gene20962:CDS |
| ATTCAAGTTCTTGGTGACAA+TGG | 0.555532 | 1.3:+60421285 | MS.gene20962:CDS |
| CTTACGCAGATGATGTCAAT+GGG | 0.556698 | 1.3:+60422374 | MS.gene20962:intron |
| ATTTCATCTACTTCGCGAGA+TGG | 0.557156 | 1.3:-60420463 | None:intergenic |
| ATGCGAGTAATATCCCCATA+AGG | 0.560313 | 1.3:-60420841 | None:intergenic |
| CAAGCTTCTCTCTAGCCAAA+CGG | 0.561344 | 1.3:-60420023 | None:intergenic |
| GAACCGATGAATGTTTCTAA+GGG | 0.563235 | 1.3:+60420655 | MS.gene20962:CDS |
| AGAGCTAATCTTCAGAACAT+AGG | 0.563549 | 1.3:+60420982 | MS.gene20962:CDS |
| TAATGGTGGCCATGCTTCAG+TGG | 0.563671 | 1.3:+60423070 | MS.gene20962:CDS |
| TAAAGCTTCTATGCTGGATG+AGG | 0.564004 | 1.3:+60422234 | MS.gene20962:CDS |
| TACAAGCCAGATCCCTAACC+AGG | 0.569454 | 1.3:+60422880 | MS.gene20962:CDS |
| CAGATGATGTCAATGGGAGC+TGG | 0.570696 | 1.3:+60422380 | MS.gene20962:intron |
| GGGTCCAGGCATATGCGCAA+CGG | 0.570830 | 1.3:-60422600 | None:intergenic |
| ATATGATTTCCTTGCATCTG+AGG | 0.571553 | 1.3:-60422575 | None:intergenic |
| CCATGCATAGCAGAGGGTCC+AGG | 0.572604 | 1.3:-60422614 | None:intergenic |
| AAAGGAAATGCCGGAGCATG+CGG | 0.577573 | 1.3:-60422698 | None:intergenic |
| ATGGCCAGATCGAATACTCA+AGG | 0.580647 | 1.3:+60422638 | MS.gene20962:CDS |
| TCCAAGCGGTGAGTGTTCAA+AGG | 0.581477 | 1.3:+60421113 | MS.gene20962:CDS |
| ACCCTCTGCTATGCATGGAA+TGG | 0.583329 | 1.3:+60422619 | MS.gene20962:CDS |
| TGGGCATCGGCATGCATATG+GGG | 0.587722 | 1.3:+60422480 | MS.gene20962:CDS |
| GAAAATAATAATGTTAGCAG+TGG | 0.593251 | 1.3:+60420805 | MS.gene20962:CDS |
| AAAAGATCGAAGGCCAGATG+TGG | 0.594060 | 1.3:+60422820 | MS.gene20962:CDS |
| GATCCTATAATGCCTGGCAA+TGG | 0.595775 | 1.3:+60420910 | MS.gene20962:CDS |
| AAGTGCATAATCTATCTGAA+AGG | 0.598272 | 1.3:+60421631 | MS.gene20962:CDS |
| GCAAGACATAAAGCTAGTGC+CGG | 0.602436 | 1.3:+60420706 | MS.gene20962:CDS |
| TAAAACTATTTGAGGCAGGA+AGG | 0.602999 | 1.3:-60420570 | None:intergenic |
| GATTATGCACTTCAGCAGCA+CGG | 0.604449 | 1.3:-60421620 | None:intergenic |
| CAATGGTGCAGACAGAGGCT+CGG | 0.605241 | 1.3:+60421377 | MS.gene20962:CDS |
| TGAGATGGTAAGCAGTGAGA+TGG | 0.605275 | 1.3:-60420328 | None:intergenic |
| CACAGCTTCAACATGTCCTG+TGG | 0.605340 | 1.3:-60422774 | None:intergenic |
| GCCATTCCATGCATAGCAGA+GGG | 0.607653 | 1.3:-60422620 | None:intergenic |
| AGCCAAGGTCAATCAAGTAG+AGG | 0.608356 | 1.3:+60420277 | MS.gene20962:CDS |
| GATCCATACACAGACGGACC+CGG | 0.610764 | 1.3:-60422752 | None:intergenic |
| GATGGCAAACTCCTACAAGA+TGG | 0.610890 | 1.3:-60420310 | None:intergenic |
| TCTGGCAATGGTGCAGACAG+AGG | 0.613703 | 1.3:+60421372 | MS.gene20962:CDS |
| TAACCAGGACGTGCCTTATG+GGG | 0.616802 | 1.3:+60420828 | MS.gene20962:CDS |
| TGTTAATGAACTTACGACGA+AGG | 0.616840 | 1.3:-60420081 | None:intergenic |
| TGTCATCAGCCACTGAAGCA+TGG | 0.619461 | 1.3:-60423079 | None:intergenic |
| ATTCAAGTACCTCAGATGCA+AGG | 0.620716 | 1.3:+60422566 | MS.gene20962:CDS |
| GAACCCTTAGAAACATTCAT+CGG | 0.621432 | 1.3:-60420658 | None:intergenic |
| GGCCATTCCATGCATAGCAG+AGG | 0.624817 | 1.3:-60422621 | None:intergenic |
| GATGTTGAGGATGAATCAGT+GGG | 0.625050 | 1.3:+60421549 | MS.gene20962:CDS |
| TCAGCTCTTGTTAATCCAAG+CGG | 0.627460 | 1.3:+60421099 | MS.gene20962:CDS |
| GGCCGAGATAAAGACGTAGG+AGG | 0.627711 | 1.3:+60420361 | MS.gene20962:CDS |
| TGATGGCGGATATAACTGAC+CGG | 0.631000 | 1.3:-60420725 | None:intergenic |
| TGAATCATTGGAAATCTAGA+CGG | 0.631570 | 1.3:-60422548 | None:intergenic |
| AAGCTTGATAATGAGACTAA+CGG | 0.634639 | 1.3:+60420039 | MS.gene20962:CDS |
| CGTGTGGCTCAAAAGATCGA+AGG | 0.637154 | 1.3:+60422810 | MS.gene20962:CDS |
| TCAACTTTGGTGCATAATGG+TGG | 0.640234 | 1.3:+60423056 | MS.gene20962:CDS |
| GGATGTTGAGGATGAATCAG+TGG | 0.640619 | 1.3:+60421548 | MS.gene20962:intron |
| TTACCATCTCATAGTCCTAG+AGG | 0.648051 | 1.3:+60420340 | MS.gene20962:CDS |
| AGTGGTCAGATTTCAAGCCA+AGG | 0.648899 | 1.3:+60420262 | MS.gene20962:CDS |
| ATGGGAATGCCTGACATGAA+CGG | 0.649844 | 1.3:+60422521 | MS.gene20962:CDS |
| CGGCCTCTAGGACTATGAGA+TGG | 0.650416 | 1.3:-60420343 | None:intergenic |
| GGAAATGCGCTGTCATAAGG+TGG | 0.651300 | 1.3:+60421140 | MS.gene20962:CDS |
| AAGTAGATGAAATGATGCCT+TGG | 0.653879 | 1.3:+60420473 | MS.gene20962:CDS |
| TCCATTGAATAATCCAACCA+AGG | 0.654964 | 1.3:-60420490 | None:intergenic |
| TGACATTGATTCGATGATGG+CGG | 0.655078 | 1.3:-60420739 | None:intergenic |
| AGAGGCCGAGATAAAGACGT+AGG | 0.655257 | 1.3:+60420358 | MS.gene20962:CDS |
| TAAGGTGGTAGAGCCATCCA+AGG | 0.655378 | 1.3:+60421155 | MS.gene20962:CDS |
| TGTGAAAATGCGGCCATGTG+TGG | 0.658564 | 1.3:-60422455 | None:intergenic |
| GGAATGCCTGACATGAACGG+CGG | 0.663426 | 1.3:+60422524 | MS.gene20962:CDS |
| TGGCCAGATCGAATACTCAA+GGG | 0.668407 | 1.3:+60422639 | MS.gene20962:CDS |
| CCTGTGGATCCATACACAGA+CGG | 0.678896 | 1.3:-60422758 | None:intergenic |
| TTAACAAGAGCTGAATCAGG+AGG | 0.682638 | 1.3:-60421090 | None:intergenic |
| ATTGAATGAGATTCCAATGT+CGG | 0.685130 | 1.3:+60420438 | MS.gene20962:CDS |
| GATGCCCATCTGTGAAAATG+CGG | 0.689000 | 1.3:-60422465 | None:intergenic |
| ATACACAGACGGACCCGGAG+CGG | 0.699444 | 1.3:-60422747 | None:intergenic |
| ACGGAAAAGTAGAGACACTG+AGG | 0.744015 | 1.3:+60421422 | MS.gene20962:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAACAGAAAATTATTA+CGG | - | chr1.3:60422965-60422984 | None:intergenic | 15.0% |
| !! | CAAAAGATTTATGAAATTAT+TGG | + | chr1.3:60421987-60422006 | MS.gene20962:intron | 15.0% |
| !! | TATTGGATAAAAAAAGTAAT+GGG | + | chr1.3:60420596-60420615 | MS.gene20962:CDS | 15.0% |
| !! | TGAAAAACTGTATAAAATTA+TGG | + | chr1.3:60421873-60421892 | MS.gene20962:intron | 15.0% |
| !!! | ACTTAATTCCTTATTTATTT+CGG | + | chr1.3:60422182-60422201 | MS.gene20962:intron | 15.0% |
| !!! | ATAATTTTATACAGTTTTTC+AGG | - | chr1.3:60421874-60421893 | None:intergenic | 15.0% |
| !! | ATCATAATTTATGTATACAG+AGG | + | chr1.3:60421745-60421764 | MS.gene20962:intron | 20.0% |
| !! | ATTATTAACTTACTTCACTA+TGG | - | chr1.3:60421458-60421477 | None:intergenic | 20.0% |
| !! | CTATTGGATAAAAAAAGTAA+TGG | + | chr1.3:60420595-60420614 | MS.gene20962:CDS | 20.0% |
| !! | TGTTGACAAATATAGAATAT+TGG | + | chr1.3:60421910-60421929 | MS.gene20962:intron | 20.0% |
| !!! | ACTGCTAACATTATTATTTT+CGG | - | chr1.3:60420806-60420825 | None:intergenic | 20.0% |
| !!! | AGCTTATTTTATTTCCATTT+TGG | + | chr1.3:60421716-60421735 | MS.gene20962:intron | 20.0% |
| !!! | TTTCTTAGTTTTGTTTGTTT+TGG | + | chr1.3:60420186-60420205 | MS.gene20962:intron | 20.0% |
| ! | AAACTAAAATATTAATGCCG+AGG | - | chr1.3:60422313-60422332 | None:intergenic | 25.0% |
| ! | AAACTAACCTTATTGCAATT+AGG | - | chr1.3:60421819-60421838 | None:intergenic | 25.0% |
| ! | AACTAAAATATTAATGCCGA+GGG | - | chr1.3:60422312-60422331 | None:intergenic | 25.0% |
| ! | AGTAATAACAATCCAAAGAT+AGG | + | chr1.3:60420391-60420410 | MS.gene20962:CDS | 25.0% |
| ! | ATGGGAAAAATTCATTACAT+TGG | - | chr1.3:60420938-60420957 | None:intergenic | 25.0% |
| ! | CAAGAAAACACTTTAATTGA+AGG | + | chr1.3:60421527-60421546 | MS.gene20962:intron | 25.0% |
| ! | CAATAGAGTAAAACTATTTG+AGG | - | chr1.3:60420581-60420600 | None:intergenic | 25.0% |
| ! | GAAAATAATAATGTTAGCAG+TGG | + | chr1.3:60420805-60420824 | MS.gene20962:CDS | 25.0% |
| ! | GAATGATATTTACTTGAACT+TGG | - | chr1.3:60422288-60422307 | None:intergenic | 25.0% |
| ! | GTTATAGGAGTTAAGAATAA+AGG | + | chr1.3:60421045-60421064 | MS.gene20962:CDS | 25.0% |
| ! | TAATGGGAATCAGATATTTA+GGG | + | chr1.3:60420612-60420631 | MS.gene20962:CDS | 25.0% |
| ! | TGTTTGATCATGAAATGAAA+TGG | + | chr1.3:60420141-60420160 | MS.gene20962:intron | 25.0% |
| ! | TTGAATACACTTCATGAATA+CGG | - | chr1.3:60422061-60422080 | None:intergenic | 25.0% |
| !!! | CTCAAATAGTTTTACTCTAT+TGG | + | chr1.3:60420579-60420598 | MS.gene20962:CDS | 25.0% |
| !!! | CTTCAATTAAAGTGTTTTCT+TGG | - | chr1.3:60421529-60421548 | None:intergenic | 25.0% |
| !!! | TTTTTTTGAACAAGCCAAAA+TGG | - | chr1.3:60422110-60422129 | None:intergenic | 25.0% |
| AAACGGTATAACTCATAAAG+AGG | - | chr1.3:60420009-60420028 | None:intergenic | 30.0% | |
| AACATGACACAAATAACAGA+TGG | - | chr1.3:60421667-60421686 | None:intergenic | 30.0% | |
| AAGTGCATAATCTATCTGAA+AGG | + | chr1.3:60421631-60421650 | MS.gene20962:CDS | 30.0% | |
| AATCCAAAGATAGGAAAGTT+TGG | + | chr1.3:60420400-60420419 | MS.gene20962:CDS | 30.0% | |
| ACTAAAATATTAATGCCGAG+GGG | - | chr1.3:60422311-60422330 | None:intergenic | 30.0% | |
| ACTCATACCTAATTGCAATA+AGG | + | chr1.3:60421809-60421828 | MS.gene20962:CDS | 30.0% | |
| ACTTTAATTGAAGGATGTTG+AGG | + | chr1.3:60421536-60421555 | MS.gene20962:intron | 30.0% | |
| AGCTCAAAAAAATCATTCTC+AGG | - | chr1.3:60420232-60420251 | None:intergenic | 30.0% | |
| AGTGCATAATCTATCTGAAA+GGG | + | chr1.3:60421632-60421651 | MS.gene20962:CDS | 30.0% | |
| ATCCAAATCGAGATTTGAAA+CGG | + | chr1.3:60421403-60421422 | MS.gene20962:CDS | 30.0% | |
| ATCTGTAACTGTTAGATCTA+GGG | + | chr1.3:60420768-60420787 | MS.gene20962:CDS | 30.0% | |
| ATGGAAATAAAATAAGCTCG+AGG | - | chr1.3:60421714-60421733 | None:intergenic | 30.0% | |
| ATTATGATCATCAGCCAAAA+TGG | - | chr1.3:60421733-60421752 | None:intergenic | 30.0% | |
| ATTGAATGAGATTCCAATGT+CGG | + | chr1.3:60420438-60420457 | MS.gene20962:CDS | 30.0% | |
| CAGAAATGCCGAAATAAATA+AGG | - | chr1.3:60422193-60422212 | None:intergenic | 30.0% | |
| TCTTTATGAGTTATACCGTT+TGG | + | chr1.3:60420008-60420027 | MS.gene20962:CDS | 30.0% | |
| TGAATCATTGGAAATCTAGA+CGG | - | chr1.3:60422551-60422570 | None:intergenic | 30.0% | |
| TGATTTCTTTCATGAACTCA+CGG | + | chr1.3:60420540-60420559 | MS.gene20962:CDS | 30.0% | |
| TGGAAATAAAATAAGCTCGA+GGG | - | chr1.3:60421713-60421732 | None:intergenic | 30.0% | |
| TGGATTTAAACAGTCAACTT+TGG | + | chr1.3:60423043-60423062 | MS.gene20962:intron | 30.0% | |
| ! | AAATGTCAGAAGTTCCATTT+TGG | + | chr1.3:60422093-60422112 | MS.gene20962:intron | 30.0% |
| ! | AGTGTTTTCTTGGTTTATAG+AGG | - | chr1.3:60421519-60421538 | None:intergenic | 30.0% |
| ! | GTAATGGGAATCAGATATTT+AGG | + | chr1.3:60420611-60420630 | MS.gene20962:CDS | 30.0% |
| ! | GTGTTTTCTTGGTTTATAGA+GGG | - | chr1.3:60421518-60421537 | None:intergenic | 30.0% |
| ! | TGAATTTTTCCCATTTTGCA+AGG | + | chr1.3:60420944-60420963 | MS.gene20962:CDS | 30.0% |
| !! | AAGCTTGATAATGAGACTAA+CGG | + | chr1.3:60420039-60420058 | MS.gene20962:CDS | 30.0% |
| !! | TGGATTTGATTTGAATGTGT+AGG | + | chr1.3:60420206-60420225 | MS.gene20962:intron | 30.0% |
| !!! | ATGATTTTTTTGAGCTGGTT+TGG | + | chr1.3:60420236-60420255 | MS.gene20962:CDS | 30.0% |
| !!! | TGAGAATGATTTTTTTGAGC+TGG | + | chr1.3:60420231-60420250 | MS.gene20962:CDS | 30.0% |
| !!! | TGATTTTTTTGAGCTGGTTT+GGG | + | chr1.3:60420237-60420256 | MS.gene20962:CDS | 30.0% |
| AAGTAAATATCATTCCCCCT+CGG | + | chr1.3:60422293-60422312 | MS.gene20962:intron | 35.0% | |
| AAGTAGATGAAATGATGCCT+TGG | + | chr1.3:60420473-60420492 | MS.gene20962:CDS | 35.0% | |
| ACACTAGTATAACAGAGAAG+CGG | - | chr1.3:60423007-60423026 | None:intergenic | 35.0% | |
| AGAGCTAATCTTCAGAACAT+AGG | + | chr1.3:60420982-60421001 | MS.gene20962:CDS | 35.0% | |
| AGCTAAGTTTGAATCCATAG+TGG | - | chr1.3:60421939-60421958 | None:intergenic | 35.0% | |
| ATATGATTTCCTTGCATCTG+AGG | - | chr1.3:60422578-60422597 | None:intergenic | 35.0% | |
| ATTGTCACCAAGAACTTGAA+TGG | - | chr1.3:60421286-60421305 | None:intergenic | 35.0% | |
| CAAATTAAGCAAAACACTGC+TGG | + | chr1.3:60422848-60422867 | MS.gene20962:CDS | 35.0% | |
| CATCTGTAACTGTTAGATCT+AGG | + | chr1.3:60420767-60420786 | MS.gene20962:CDS | 35.0% | |
| CTAAAATATTAATGCCGAGG+GGG | - | chr1.3:60422310-60422329 | None:intergenic | 35.0% | |
| CTAAGAAGAGCAAAATCAGA+AGG | - | chr1.3:60421846-60421865 | None:intergenic | 35.0% | |
| GAACCCTTAGAAACATTCAT+CGG | - | chr1.3:60420661-60420680 | None:intergenic | 35.0% | |
| GAATCAGTGGGAGTTAAAAA+GGG | + | chr1.3:60421561-60421580 | MS.gene20962:CDS | 35.0% | |
| GTTGACTGTTTAAATCCAAC+AGG | - | chr1.3:60423041-60423060 | None:intergenic | 35.0% | |
| TCACCAAACTTTCCTATCTT+TGG | - | chr1.3:60420406-60420425 | None:intergenic | 35.0% | |
| TCAGCAAGATCAGATGTTAT+AGG | + | chr1.3:60421030-60421049 | MS.gene20962:CDS | 35.0% | |
| TCCATTGAATAATCCAACCA+AGG | - | chr1.3:60420493-60420512 | None:intergenic | 35.0% | |
| TGAATCAGTGGGAGTTAAAA+AGG | + | chr1.3:60421560-60421579 | MS.gene20962:CDS | 35.0% | |
| TGGTTGGATTATTCAATGGA+TGG | + | chr1.3:60420493-60420512 | MS.gene20962:CDS | 35.0% | |
| TGTTAATGAACTTACGACGA+AGG | - | chr1.3:60420084-60420103 | None:intergenic | 35.0% | |
| TGTTTAGTAGCTACAGCATT+TGG | - | chr1.3:60421216-60421235 | None:intergenic | 35.0% | |
| TTCCGTTTCAAATCTCGATT+TGG | - | chr1.3:60421408-60421427 | None:intergenic | 35.0% | |
| ! | AAGTTTGGTGATTTAGACTC+TGG | + | chr1.3:60420415-60420434 | MS.gene20962:CDS | 35.0% |
| ! | AGAACCGATGAATGTTTCTA+AGG | + | chr1.3:60420654-60420673 | MS.gene20962:CDS | 35.0% |
| ! | AGAGTAAAACTATTTGAGGC+AGG | - | chr1.3:60420577-60420596 | None:intergenic | 35.0% |
| ! | ATCTGAGGTACTTGAATCAT+TGG | - | chr1.3:60422563-60422582 | None:intergenic | 35.0% |
| ! | ATTCAAGTTCTTGGTGACAA+TGG | + | chr1.3:60421285-60421304 | MS.gene20962:CDS | 35.0% |
| ! | GAACCGATGAATGTTTCTAA+GGG | + | chr1.3:60420655-60420674 | MS.gene20962:CDS | 35.0% |
| ! | GCATTTGGTTCAAGCAATTT+CGG | - | chr1.3:60421201-60421220 | None:intergenic | 35.0% |
| ! | TAAAACTATTTGAGGCAGGA+AGG | - | chr1.3:60420573-60420592 | None:intergenic | 35.0% |
| ! | TAGAATATTGGTTGCCACTA+TGG | + | chr1.3:60421922-60421941 | MS.gene20962:intron | 35.0% |
| ! | TTAGGTATGGGTTATGGAAT+GGG | + | chr1.3:60422503-60422522 | MS.gene20962:CDS | 35.0% |
| !! | GTTTGACATTGATTCGATGA+TGG | - | chr1.3:60420745-60420764 | None:intergenic | 35.0% |
| !! | TTAATTTGTGAGTCCACATC+TGG | - | chr1.3:60422836-60422855 | None:intergenic | 35.0% |
| AAACCCTTGAGTATTCGATC+TGG | - | chr1.3:60422645-60422664 | None:intergenic | 40.0% | |
| AAGCAAGATCCTATAATGCC+TGG | + | chr1.3:60420904-60420923 | MS.gene20962:CDS | 40.0% | |
| ACATGTTGAAGCTGTGAATC+CGG | + | chr1.3:60422781-60422800 | MS.gene20962:CDS | 40.0% | |
| AGATCGAATACTCAAGGGTT+TGG | + | chr1.3:60422644-60422663 | MS.gene20962:CDS | 40.0% | |
| AGATGAAATGATGCCTTGGT+TGG | + | chr1.3:60420477-60420496 | MS.gene20962:CDS | 40.0% | |
| ATGCATATGGGGTTAGGTAT+GGG | + | chr1.3:60422491-60422510 | MS.gene20962:CDS | 40.0% | |
| ATGCGAGTAATATCCCCATA+AGG | - | chr1.3:60420844-60420863 | None:intergenic | 40.0% | |
| ATTACATTGGAACCATTGCC+AGG | - | chr1.3:60420925-60420944 | None:intergenic | 40.0% | |
| ATTCAAGTACCTCAGATGCA+AGG | + | chr1.3:60422566-60422585 | MS.gene20962:CDS | 40.0% | |
| ATTCCATTCTCTTTGCAAGC+AGG | - | chr1.3:60421246-60421265 | None:intergenic | 40.0% | |
| ATTTCATCTACTTCGCGAGA+TGG | - | chr1.3:60420466-60420485 | None:intergenic | 40.0% | |
| CAAAGGTTTCAAATCAGCCT+TGG | - | chr1.3:60421175-60421194 | None:intergenic | 40.0% | |
| CTTACGCAGATGATGTCAAT+GGG | + | chr1.3:60422374-60422393 | MS.gene20962:intron | 40.0% | |
| GAAAATTGATCACAGAGACC+TGG | - | chr1.3:60422921-60422940 | None:intergenic | 40.0% | |
| GATGTTGAGGATGAATCAGT+GGG | + | chr1.3:60421549-60421568 | MS.gene20962:CDS | 40.0% | |
| GCCTTGGTTGGATTATTCAA+TGG | + | chr1.3:60420489-60420508 | MS.gene20962:CDS | 40.0% | |
| GGATTAACAAGAGCTGAATC+AGG | - | chr1.3:60421096-60421115 | None:intergenic | 40.0% | |
| GTAGAAAGAGTCCATCTTGT+AGG | + | chr1.3:60420299-60420318 | MS.gene20962:CDS | 40.0% | |
| TAAAGCTTCTATGCTGGATG+AGG | + | chr1.3:60422234-60422253 | MS.gene20962:CDS | 40.0% | |
| TAAGCTAGAAAAATCGCTCG+AGG | - | chr1.3:60420875-60420894 | None:intergenic | 40.0% | |
| TAATGTTAGCAGTGGTAACC+AGG | + | chr1.3:60420813-60420832 | MS.gene20962:CDS | 40.0% | |
| TACCTCTACTTGATTGACCT+TGG | - | chr1.3:60420282-60420301 | None:intergenic | 40.0% | |
| TCACCAAGAACTTGAATGGA+AGG | - | chr1.3:60421282-60421301 | None:intergenic | 40.0% | |
| TCAGCTCTTGTTAATCCAAG+CGG | + | chr1.3:60421099-60421118 | MS.gene20962:CDS | 40.0% | |
| TCGGCATTTCTGACTTCATA+CGG | + | chr1.3:60422201-60422220 | MS.gene20962:intron | 40.0% | |
| TCTATCTGAAAGGGTGAGTA+AGG | + | chr1.3:60421641-60421660 | MS.gene20962:intron | 40.0% | |
| TCTTACGCAGATGATGTCAA+TGG | + | chr1.3:60422373-60422392 | MS.gene20962:intron | 40.0% | |
| TGACATCATCTGCGTAAGAT+AGG | - | chr1.3:60422372-60422391 | None:intergenic | 40.0% | |
| TTAACAAGAGCTGAATCAGG+AGG | - | chr1.3:60421093-60421112 | None:intergenic | 40.0% | |
| TTACCATCTCATAGTCCTAG+AGG | + | chr1.3:60420340-60420359 | MS.gene20962:CDS | 40.0% | |
| TTTCTGACTTCATACGGACT+AGG | + | chr1.3:60422207-60422226 | MS.gene20962:intron | 40.0% | |
| ! | CAACCTTCCATTCAAGTTCT+TGG | + | chr1.3:60421276-60421295 | MS.gene20962:CDS | 40.0% |
| ! | CAGTCAACTTTGGTGCATAA+TGG | + | chr1.3:60423053-60423072 | MS.gene20962:intron | 40.0% |
| ! | GTTAGGTATGGGTTATGGAA+TGG | + | chr1.3:60422502-60422521 | MS.gene20962:CDS | 40.0% |
| ! | TCAACTTTGGTGCATAATGG+TGG | + | chr1.3:60423056-60423075 | MS.gene20962:CDS | 40.0% |
| !! | TGACATTGATTCGATGATGG+CGG | - | chr1.3:60420742-60420761 | None:intergenic | 40.0% |
| AAAAGATCGAAGGCCAGATG+TGG | + | chr1.3:60422820-60422839 | MS.gene20962:CDS | 45.0% | |
| AAGCCTGCTTGCAAAGAGAA+TGG | + | chr1.3:60421240-60421259 | MS.gene20962:CDS | 45.0% | |
| ACCTTATGACAGCGCATTTC+CGG | - | chr1.3:60421141-60421160 | None:intergenic | 45.0% | |
| ACGGAAAAGTAGAGACACTG+AGG | + | chr1.3:60421422-60421441 | MS.gene20962:CDS | 45.0% | |
| AGCCAAGGTCAATCAAGTAG+AGG | + | chr1.3:60420277-60420296 | MS.gene20962:CDS | 45.0% | |
| AGCTCGAGGGAAAATATGTG+TGG | - | chr1.3:60421700-60421719 | None:intergenic | 45.0% | |
| AGGGATAAACAGACCTGGTT+AGG | - | chr1.3:60422896-60422915 | None:intergenic | 45.0% | |
| AGGTCTGTTTATCCCTAACC+AGG | + | chr1.3:60422900-60422919 | MS.gene20962:intron | 45.0% | |
| AGTGGGAGTTAAAAAGGGAG+CGG | + | chr1.3:60421566-60421585 | MS.gene20962:CDS | 45.0% | |
| AGTGGTCAGATTTCAAGCCA+AGG | + | chr1.3:60420262-60420281 | MS.gene20962:CDS | 45.0% | |
| ATAAGAGGCCCTCCTGAAAA+AGG | - | chr1.3:60422719-60422738 | None:intergenic | 45.0% | |
| ATGGCCAGATCGAATACTCA+AGG | + | chr1.3:60422638-60422657 | MS.gene20962:CDS | 45.0% | |
| ATGGGAATGCCTGACATGAA+CGG | + | chr1.3:60422521-60422540 | MS.gene20962:CDS | 45.0% | |
| CAAGCTTCTCTCTAGCCAAA+CGG | - | chr1.3:60420026-60420045 | None:intergenic | 45.0% | |
| CAGAACATAGGCTTGAAGTC+TGG | + | chr1.3:60420994-60421013 | MS.gene20962:CDS | 45.0% | |
| CATGCATATGGGGTTAGGTA+TGG | + | chr1.3:60422490-60422509 | MS.gene20962:CDS | 45.0% | |
| CCAGCAGGTAACATCATTTG+AGG | - | chr1.3:60422416-60422435 | None:intergenic | 45.0% | |
| CCTCAAATGATGTTACCTGC+TGG | + | chr1.3:60422413-60422432 | MS.gene20962:CDS | 45.0% | |
| CCTCCTGAAAAAGGAAATGC+CGG | - | chr1.3:60422710-60422729 | None:intergenic | 45.0% | |
| CTCCTCCTACGTCTTTATCT+CGG | - | chr1.3:60420366-60420385 | None:intergenic | 45.0% | |
| GAAAAATCGCTCGAGGAAGA+TGG | - | chr1.3:60420868-60420887 | None:intergenic | 45.0% | |
| GAACCATTGCCAGGCATTAT+AGG | - | chr1.3:60420916-60420935 | None:intergenic | 45.0% | |
| GATCCTATAATGCCTGGCAA+TGG | + | chr1.3:60420910-60420929 | MS.gene20962:CDS | 45.0% | |
| GATGCCCATCTGTGAAAATG+CGG | - | chr1.3:60422468-60422487 | None:intergenic | 45.0% | |
| GATGGCAAACTCCTACAAGA+TGG | - | chr1.3:60420313-60420332 | None:intergenic | 45.0% | |
| GATTATGCACTTCAGCAGCA+CGG | - | chr1.3:60421623-60421642 | None:intergenic | 45.0% | |
| GCAAGACATAAAGCTAGTGC+CGG | + | chr1.3:60420706-60420725 | MS.gene20962:CDS | 45.0% | |
| GCTCGAGGGAAAATATGTGT+GGG | - | chr1.3:60421699-60421718 | None:intergenic | 45.0% | |
| GGATGTTGAGGATGAATCAG+TGG | + | chr1.3:60421548-60421567 | MS.gene20962:intron | 45.0% | |
| GGCTCTTTGCAACACGAATA+TGG | + | chr1.3:60420514-60420533 | MS.gene20962:CDS | 45.0% | |
| GGGATAAACAGACCTGGTTA+GGG | - | chr1.3:60422895-60422914 | None:intergenic | 45.0% | |
| GGTGGATAAAGCTTCTATGC+TGG | + | chr1.3:60422228-60422247 | MS.gene20962:intron | 45.0% | |
| GGTTTCAAATCAGCCTTGGA+TGG | - | chr1.3:60421171-60421190 | None:intergenic | 45.0% | |
| GTGTGTGTGAACTAACCTGT+TGG | + | chr1.3:60423023-60423042 | MS.gene20962:intron | 45.0% | |
| TAAGGGTTCTTCAGCTGAAC+AGG | + | chr1.3:60420672-60420691 | MS.gene20962:CDS | 45.0% | |
| TACTCAAGGGTTTGGACTTC+CGG | + | chr1.3:60422652-60422671 | MS.gene20962:CDS | 45.0% | |
| TCAAGCAATTTCGGCTGCAA+AGG | - | chr1.3:60421192-60421211 | None:intergenic | 45.0% | |
| TCTTATGAACTCATCCGCTC+CGG | + | chr1.3:60422733-60422752 | MS.gene20962:CDS | 45.0% | |
| TCTTCTGTTTGCTCTGGCAA+TGG | + | chr1.3:60421360-60421379 | MS.gene20962:CDS | 45.0% | |
| TGACAGTGAAGCTGCTAATC+CGG | + | chr1.3:60423097-60423116 | MS.gene20962:CDS | 45.0% | |
| TGAGATGGTAAGCAGTGAGA+TGG | - | chr1.3:60420331-60420350 | None:intergenic | 45.0% | |
| TGATCACAGAGACCTGGTTA+GGG | - | chr1.3:60422915-60422934 | None:intergenic | 45.0% | |
| TGGCCAGATCGAATACTCAA+GGG | + | chr1.3:60422639-60422658 | MS.gene20962:CDS | 45.0% | |
| TGGTTAGGGATAAACAGACC+TGG | - | chr1.3:60422901-60422920 | None:intergenic | 45.0% | |
| TTGATCACAGAGACCTGGTT+AGG | - | chr1.3:60422916-60422935 | None:intergenic | 45.0% | |
| ! | ATGGCCGCATTTTCACAGAT+GGG | + | chr1.3:60422461-60422480 | MS.gene20962:CDS | 45.0% |
| ! | ATGGGGTTAGGTATGGGTTA+TGG | + | chr1.3:60422497-60422516 | MS.gene20962:CDS | 45.0% |
| ! | GCATTTTCACAGATGGGCAT+CGG | + | chr1.3:60422467-60422486 | MS.gene20962:CDS | 45.0% |
| ! | TTAGCTCTCACAATAGCTGC+AGG | - | chr1.3:60420970-60420989 | None:intergenic | 45.0% |
| !! | TGATGGCGGATATAACTGAC+CGG | - | chr1.3:60420728-60420747 | None:intergenic | 45.0% |
| !!! | CGGCATTTCCTTTTTCAGGA+GGG | + | chr1.3:60422708-60422727 | MS.gene20962:CDS | 45.0% |
| AAAGGAAATGCCGGAGCATG+CGG | - | chr1.3:60422701-60422720 | None:intergenic | 50.0% | |
| AACAGACCTGGTTAGGGATC+TGG | - | chr1.3:60422889-60422908 | None:intergenic | 50.0% | |
| ACCCTCTGCTATGCATGGAA+TGG | + | chr1.3:60422619-60422638 | MS.gene20962:CDS | 50.0% | |
| ACCGGAAATGCGCTGTCATA+AGG | + | chr1.3:60421137-60421156 | MS.gene20962:CDS | 50.0% | |
| ACGTCTTTATCTCGGCCTCT+AGG | - | chr1.3:60420358-60420377 | None:intergenic | 50.0% | |
| ACTCAAGGGTTTGGACTTCC+GGG | + | chr1.3:60422653-60422672 | MS.gene20962:CDS | 50.0% | |
| AGAGGCCGAGATAAAGACGT+AGG | + | chr1.3:60420358-60420377 | MS.gene20962:CDS | 50.0% | |
| AGCTGCAGGCCTTGCAAAAT+GGG | - | chr1.3:60420956-60420975 | None:intergenic | 50.0% | |
| ATCGGCATGCATATGGGGTT+AGG | + | chr1.3:60422485-60422504 | MS.gene20962:CDS | 50.0% | |
| CACAGCTGCTGAAAAAGGCA+TGG | + | chr1.3:60421320-60421339 | MS.gene20962:CDS | 50.0% | |
| CACAGCTTCAACATGTCCTG+TGG | - | chr1.3:60422777-60422796 | None:intergenic | 50.0% | |
| CAGATGATGTCAATGGGAGC+TGG | + | chr1.3:60422380-60422399 | MS.gene20962:intron | 50.0% | |
| CCTGTGGATCCATACACAGA+CGG | - | chr1.3:60422761-60422780 | None:intergenic | 50.0% | |
| CGAGATAAAGACGTAGGAGG+AGG | + | chr1.3:60420364-60420383 | MS.gene20962:CDS | 50.0% | |
| CGGTGAGTGTTCAAAGGAAC+CGG | + | chr1.3:60421119-60421138 | MS.gene20962:CDS | 50.0% | |
| CGTGTGGCTCAAAAGATCGA+AGG | + | chr1.3:60422810-60422829 | MS.gene20962:CDS | 50.0% | |
| CTTATGAACTCATCCGCTCC+GGG | + | chr1.3:60422734-60422753 | MS.gene20962:CDS | 50.0% | |
| GACAGTGAAGCTGCTAATCC+GGG | + | chr1.3:60423098-60423117 | MS.gene20962:CDS | 50.0% | |
| GCCAGAGCAAACAGAAGAAG+AGG | - | chr1.3:60421358-60421377 | None:intergenic | 50.0% | |
| GCCATTCCATGCATAGCAGA+GGG | - | chr1.3:60422623-60422642 | None:intergenic | 50.0% | |
| GCCTCTTCTTCTGTTTGCTC+TGG | + | chr1.3:60421354-60421373 | MS.gene20962:CDS | 50.0% | |
| GGAAATGCGCTGTCATAAGG+TGG | + | chr1.3:60421140-60421159 | MS.gene20962:CDS | 50.0% | |
| GGACACACAGCTGCTGAAAA+AGG | + | chr1.3:60421315-60421334 | MS.gene20962:CDS | 50.0% | |
| GGAGCGGATGAGTTCATAAG+AGG | - | chr1.3:60422734-60422753 | None:intergenic | 50.0% | |
| GTAACCAGGACGTGCCTTAT+GGG | + | chr1.3:60420827-60420846 | MS.gene20962:CDS | 50.0% | |
| GTATACAGAGGCGAAGAGAC+AGG | + | chr1.3:60421757-60421776 | MS.gene20962:intron | 50.0% | |
| TAACCAGGACGTGCCTTATG+GGG | + | chr1.3:60420828-60420847 | MS.gene20962:CDS | 50.0% | |
| TAAGGTGGTAGAGCCATCCA+AGG | + | chr1.3:60421155-60421174 | MS.gene20962:CDS | 50.0% | |
| TAATGGTGGCCATGCTTCAG+TGG | + | chr1.3:60423070-60423089 | MS.gene20962:CDS | 50.0% | |
| TACAAGCCAGATCCCTAACC+AGG | + | chr1.3:60422880-60422899 | MS.gene20962:CDS | 50.0% | |
| TAGCTGCAGGCCTTGCAAAA+TGG | - | chr1.3:60420957-60420976 | None:intergenic | 50.0% | |
| TCCAAGCGGTGAGTGTTCAA+AGG | + | chr1.3:60421113-60421132 | MS.gene20962:CDS | 50.0% | |
| TCCTTTGAACACTCACCGCT+TGG | - | chr1.3:60421117-60421136 | None:intergenic | 50.0% | |
| TGTCATCAGCCACTGAAGCA+TGG | - | chr1.3:60423082-60423101 | None:intergenic | 50.0% | |
| TGTGAAAATGCGGCCATGTG+TGG | - | chr1.3:60422458-60422477 | None:intergenic | 50.0% | |
| ! | AGCTGCTGAAAAAGGCATGG+AGG | + | chr1.3:60421323-60421342 | MS.gene20962:CDS | 50.0% |
| ! | CATGGCCGCATTTTCACAGA+TGG | + | chr1.3:60422460-60422479 | MS.gene20962:CDS | 50.0% |
| ! | CTTGGTGACAATGGCGCTAA+AGG | + | chr1.3:60421294-60421313 | MS.gene20962:CDS | 50.0% |
| ! | GCTCCGGCATTTCCTTTTTC+AGG | + | chr1.3:60422704-60422723 | MS.gene20962:CDS | 50.0% |
| ! | TGCTGAAAAAGGCATGGAGG+TGG | + | chr1.3:60421326-60421345 | MS.gene20962:CDS | 50.0% |
| ! | TTCAGCAGCACGGCTTCTTT+TGG | - | chr1.3:60421613-60421632 | None:intergenic | 50.0% |
| !! | ATGGGCATCGGCATGCATAT+GGG | + | chr1.3:60422479-60422498 | MS.gene20962:CDS | 50.0% |
| !! | CTGACTTCATACGGACTAGG+TGG | + | chr1.3:60422210-60422229 | MS.gene20962:intron | 50.0% |
| !! | TTTGAGCTGGTTTGGGAGAG+TGG | + | chr1.3:60420244-60420263 | MS.gene20962:CDS | 50.0% |
| !!! | CCGGCATTTCCTTTTTCAGG+AGG | + | chr1.3:60422707-60422726 | MS.gene20962:CDS | 50.0% |
| CAATGGTGCAGACAGAGGCT+CGG | + | chr1.3:60421377-60421396 | MS.gene20962:CDS | 55.0% | |
| CCGTCTGTGTATGGATCCAC+AGG | + | chr1.3:60422758-60422777 | MS.gene20962:CDS | 55.0% | |
| GAATGCCTGACATGAACGGC+GGG | + | chr1.3:60422525-60422544 | MS.gene20962:CDS | 55.0% | |
| GACTAACGGCGCAAGTGTAG+CGG | + | chr1.3:60420053-60420072 | MS.gene20962:CDS | 55.0% | |
| GATCCATACACAGACGGACC+CGG | - | chr1.3:60422755-60422774 | None:intergenic | 55.0% | |
| GCACATGCATGCACCACACA+TGG | + | chr1.3:60422442-60422461 | MS.gene20962:CDS | 55.0% | |
| GGAATGCCTGACATGAACGG+CGG | + | chr1.3:60422524-60422543 | MS.gene20962:CDS | 55.0% | |
| GGAGTTAAAAAGGGAGCGGC+TGG | + | chr1.3:60421570-60421589 | MS.gene20962:CDS | 55.0% | |
| GGCATGGAAATTCCCTGTCC+CGG | - | chr1.3:60422674-60422693 | None:intergenic | 55.0% | |
| GGCCATTCCATGCATAGCAG+AGG | - | chr1.3:60422624-60422643 | None:intergenic | 55.0% | |
| GGCCGAGATAAAGACGTAGG+AGG | + | chr1.3:60420361-60420380 | MS.gene20962:CDS | 55.0% | |
| GGTAACCAGGACGTGCCTTA+TGG | + | chr1.3:60420826-60420845 | MS.gene20962:CDS | 55.0% | |
| TATCCCCATAAGGCACGTCC+TGG | - | chr1.3:60420834-60420853 | None:intergenic | 55.0% | |
| TCTGGCAATGGTGCAGACAG+AGG | + | chr1.3:60421372-60421391 | MS.gene20962:CDS | 55.0% | |
| TGCATGTGCTGCATTCCAGC+AGG | - | chr1.3:60422431-60422450 | None:intergenic | 55.0% | |
| TTTGAGCCACACGCTGAAGC+CGG | - | chr1.3:60422803-60422822 | None:intergenic | 55.0% | |
| !! | CGGCCTCTAGGACTATGAGA+TGG | - | chr1.3:60420346-60420365 | None:intergenic | 55.0% |
| !! | GATGGGCATCGGCATGCATA+TGG | + | chr1.3:60422478-60422497 | MS.gene20962:CDS | 55.0% |
| !! | TGGGCATCGGCATGCATATG+GGG | + | chr1.3:60422480-60422499 | MS.gene20962:CDS | 55.0% |
| AAAAAGGGAGCGGCTGGACG+AGG | + | chr1.3:60421576-60421595 | MS.gene20962:CDS | 60.0% | |
| AATGCCGGAGCATGCGGCAT+TGG | - | chr1.3:60422695-60422714 | None:intergenic | 60.0% | |
| AGGGTTTGGACTTCCGGGAC+AGG | + | chr1.3:60422658-60422677 | MS.gene20962:CDS | 60.0% | |
| ATACACAGACGGACCCGGAG+CGG | - | chr1.3:60422750-60422769 | None:intergenic | 60.0% | |
| ATGCCCGTTGCGCATATGCC+TGG | + | chr1.3:60422596-60422615 | MS.gene20962:CDS | 60.0% | |
| CATGCCAATGCCGCATGCTC+CGG | + | chr1.3:60422688-60422707 | MS.gene20962:CDS | 60.0% | |
| CCATGCATAGCAGAGGGTCC+AGG | - | chr1.3:60422617-60422636 | None:intergenic | 60.0% | |
| CCTGGACCCTCTGCTATGCA+TGG | + | chr1.3:60422614-60422633 | MS.gene20962:CDS | 60.0% | |
| GGGTCCAGGCATATGCGCAA+CGG | - | chr1.3:60422603-60422622 | None:intergenic | 60.0% | |
| GGGTTTGGACTTCCGGGACA+GGG | + | chr1.3:60422659-60422678 | MS.gene20962:CDS | 60.0% | |
| GGTCCAGGCATATGCGCAAC+GGG | - | chr1.3:60422602-60422621 | None:intergenic | 60.0% | |
| GTGAATCCGGCTTCAGCGTG+TGG | + | chr1.3:60422794-60422813 | MS.gene20962:CDS | 60.0% | |
| !! | TCGCGAGATGGCACCGACAT+TGG | - | chr1.3:60420454-60420473 | None:intergenic | 60.0% |
| GCTCCGGGTCCGTCTGTGTA+TGG | + | chr1.3:60422749-60422768 | MS.gene20962:CDS | 65.0% | |
| !! | CGGAGCATGCGGCATTGGCA+TGG | - | chr1.3:60422690-60422709 | None:intergenic | 65.0% |
| GACGGCCCGCCGTTCATGTC+AGG | - | chr1.3:60422533-60422552 | None:intergenic | 70.0% | |
| GCGGCTGGACGAGGAGTTGC+AGG | + | chr1.3:60421585-60421604 | MS.gene20962:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60420003 | 60423136 | 60420003 | ID=MS.gene20962 |
| chr1.3 | mRNA | 60420003 | 60423136 | 60420003 | ID=MS.gene20962.t1;Parent=MS.gene20962 |
| chr1.3 | exon | 60420003 | 60420088 | 60420003 | ID=MS.gene20962.t1.exon1;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60420003 | 60420088 | 60420003 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| chr1.3 | exon | 60420228 | 60421464 | 60420228 | ID=MS.gene20962.t1.exon2;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60420228 | 60421464 | 60420228 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| chr1.3 | exon | 60421549 | 60421653 | 60421549 | ID=MS.gene20962.t1.exon3;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60421549 | 60421653 | 60421549 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| chr1.3 | exon | 60421765 | 60421830 | 60421765 | ID=MS.gene20962.t1.exon4;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60421765 | 60421830 | 60421765 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| chr1.3 | exon | 60422229 | 60422294 | 60422229 | ID=MS.gene20962.t1.exon5;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60422229 | 60422294 | 60422229 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| chr1.3 | exon | 60422383 | 60422901 | 60422383 | ID=MS.gene20962.t1.exon6;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60422383 | 60422901 | 60422383 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| chr1.3 | exon | 60423056 | 60423136 | 60423056 | ID=MS.gene20962.t1.exon7;Parent=MS.gene20962.t1 |
| chr1.3 | CDS | 60423056 | 60423136 | 60423056 | ID=cds.MS.gene20962.t1;Parent=MS.gene20962.t1 |
| Gene Sequence |
| Protein sequence |
