AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21132

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21132.t1 MTR_1g085770 66.667 303 35 7 1 243 1 297 7.97e-115 334
MS.gene21132.t1 MTR_1g085880 88.945 199 15 3 1 197 1 194 5.79e-110 317
MS.gene21132.t1 MTR_5g088610 51.212 330 77 10 2 271 3 308 3.66e-82 253
MS.gene21132.t1 MTR_5g088080 57.083 240 72 7 12 229 13 243 1.15e-79 243
MS.gene21132.t1 MTR_5g088150 57.083 240 72 7 12 229 13 243 1.15e-79 243
MS.gene21132.t1 MTR_5g488210 57.083 240 72 7 12 229 13 243 1.15e-79 243
MS.gene21132.t1 MTR_5g088640 53.506 271 88 9 12 252 13 275 8.98e-79 241
MS.gene21132.t1 MTR_5g062790 50.877 285 79 9 12 244 10 285 1.46e-77 239
MS.gene21132.t1 MTR_5g488170 56.250 224 70 5 12 215 13 228 1.34e-75 232
MS.gene21132.t1 MTR_4g128190 47.581 248 96 9 1 230 1 232 1.42e-61 196
MS.gene21132.t1 MTR_8g042410 40.201 199 98 6 11 190 37 233 3.21e-39 145
MS.gene21132.t1 MTR_1g021230 45.625 160 81 3 11 166 57 214 7.28e-39 142
MS.gene21132.t1 MTR_1g083630 43.915 189 92 4 10 186 11 197 1.66e-38 144
MS.gene21132.t1 MTR_3g052430 55.000 120 52 2 11 130 41 158 6.79e-38 141
MS.gene21132.t1 MTR_3g052450 55.172 116 50 2 11 126 40 153 7.98e-37 138
MS.gene21132.t1 MTR_3g011610 51.667 120 56 2 11 130 37 154 1.77e-36 137
MS.gene21132.t1 MTR_4g091490 52.066 121 55 3 8 127 10 128 6.79e-36 132
MS.gene21132.t1 MTR_2g011660 53.846 117 51 3 8 123 10 124 1.59e-35 131
MS.gene21132.t1 MTR_2g089620 53.043 115 51 3 11 124 12 124 5.00e-35 130
MS.gene21132.t1 MTR_1g017000 33.906 233 130 9 9 227 10 232 9.80e-35 127
MS.gene21132.t1 MTR_1g085040 51.240 121 56 3 4 123 5 123 1.38e-34 129
MS.gene21132.t1 MTR_4g065017 55.046 109 47 2 7 115 13 119 1.63e-34 128
MS.gene21132.t1 MTR_2g088170 55.652 115 49 2 11 125 29 141 1.80e-34 130
MS.gene21132.t1 MTR_7g110830 45.752 153 77 5 4 154 5 153 3.39e-34 128
MS.gene21132.t1 MTR_1g076150 54.286 105 46 2 11 115 12 114 7.86e-34 125
MS.gene21132.t1 MTR_8g017440 49.194 124 59 4 4 125 5 126 2.10e-33 125
MS.gene21132.t1 MTR_5g029840 55.238 105 45 2 11 115 12 114 2.36e-33 125
MS.gene21132.t1 MTR_5g007370 47.328 131 61 4 11 135 12 140 3.23e-33 124
MS.gene21132.t1 MTR_7g076740 51.282 117 53 4 9 123 10 124 3.86e-33 124
MS.gene21132.t1 MTR_1g085640 50.413 121 57 3 4 123 5 123 3.93e-33 126
MS.gene21132.t1 MTR_7g111290 54.206 107 47 2 4 110 5 109 4.96e-33 125
MS.gene21132.t1 MTR_2g097910 54.286 105 46 2 11 115 20 122 5.48e-33 124
MS.gene21132.t1 MTR_3g077110 48.819 127 57 4 9 129 10 134 6.07e-33 124
MS.gene21132.t1 MTR_1g112760 48.760 121 59 3 4 123 6 124 8.81e-33 121
MS.gene21132.t1 MTR_4g105130 41.566 166 91 5 4 167 5 166 1.60e-32 124
MS.gene21132.t1 MTR_7g115650 42.143 140 71 3 11 142 12 149 1.62e-32 120
MS.gene21132.t1 MTR_1g100653 47.748 111 56 2 11 121 12 120 1.66e-32 122
MS.gene21132.t1 MTR_1g043080 51.402 107 50 2 9 115 10 114 1.73e-32 121
MS.gene21132.t1 MTR_3g028740 50.909 110 52 2 6 115 17 124 2.46e-32 123
MS.gene21132.t1 MTR_3g074520 49.565 115 55 3 11 124 12 124 2.47e-32 123
MS.gene21132.t1 MTR_3g461490 50.435 115 54 3 11 124 12 124 2.51e-32 122
MS.gene21132.t1 MTR_0008s0390 43.382 136 68 3 11 146 13 139 3.46e-32 120
MS.gene21132.t1 MTR_4g478180 50.435 115 54 3 11 124 13 125 4.14e-32 122
MS.gene21132.t1 MTR_2g064160 43.662 142 72 4 1 141 1 135 4.26e-32 121
MS.gene21132.t1 MTR_4g121460 41.935 155 78 4 11 155 12 164 5.84e-32 122
MS.gene21132.t1 MTR_1g017140 53.774 106 46 3 11 115 12 115 1.27e-31 121
MS.gene21132.t1 MTR_1g043050 51.402 107 50 2 9 115 10 114 1.40e-31 119
MS.gene21132.t1 MTR_5g014990 52.830 106 47 3 11 115 12 115 1.53e-31 120
MS.gene21132.t1 MTR_7g102110 46.565 131 64 4 11 137 12 140 2.24e-31 119
MS.gene21132.t1 MTR_2g089450 51.429 105 49 2 11 115 12 114 2.31e-31 118
MS.gene21132.t1 MTR_8g098860 47.826 115 58 2 4 118 5 117 2.46e-31 120
MS.gene21132.t1 MTR_0251s0050 47.706 109 55 2 11 119 13 119 2.52e-31 119
MS.gene21132.t1 MTR_2g099740 47.107 121 61 3 4 123 5 123 3.26e-31 121
MS.gene21132.t1 MTR_3g103570 44.755 143 72 4 11 148 12 152 3.62e-31 120
MS.gene21132.t1 MTR_1g110460 37.113 194 111 6 11 201 26 211 4.01e-31 119
MS.gene21132.t1 MTR_4g082290 48.246 114 56 3 11 123 12 123 4.31e-31 120
MS.gene21132.t1 MTR_5g010020 49.074 108 53 2 4 111 5 110 5.05e-31 119
MS.gene21132.t1 MTR_8g017500 46.281 121 62 3 4 123 5 123 5.13e-31 119
MS.gene21132.t1 MTR_2g095520 54.902 102 43 3 11 111 12 111 6.25e-31 119
MS.gene21132.t1 MTR_6g006030 47.059 119 61 2 11 129 14 130 6.89e-31 115
MS.gene21132.t1 MTR_4g097570 54.455 101 43 3 11 110 12 110 7.30e-31 118
MS.gene21132.t1 MTR_8g095390 50.000 108 52 2 17 123 17 123 7.74e-31 118
MS.gene21132.t1 MTR_7g011170 46.957 115 58 3 11 124 12 124 8.04e-31 118
MS.gene21132.t1 MTR_5g079670 38.462 156 88 5 1 152 1 152 9.12e-31 115
MS.gene21132.t1 MTR_4g057635 52.830 106 47 3 11 115 12 115 9.58e-31 118
MS.gene21132.t1 MTR_4g082230 47.826 115 57 3 10 123 11 123 9.82e-31 120
MS.gene21132.t1 MTR_7g035075 50.000 106 51 2 11 116 14 117 1.02e-30 115
MS.gene21132.t1 MTR_6g009430 49.565 115 55 3 11 124 12 124 1.14e-30 118
MS.gene21132.t1 MTR_8g017540 47.107 121 61 3 4 123 51 169 1.44e-30 119
MS.gene21132.t1 MTR_1g086530 48.624 109 54 2 11 119 33 139 1.57e-30 116
MS.gene21132.t1 MTR_6g012690 42.029 138 74 4 11 144 12 147 2.13e-30 118
MS.gene21132.t1 MTR_6g090405 49.107 112 54 3 10 120 11 120 2.62e-30 115
MS.gene21132.t1 MTR_4g073420 48.148 108 54 2 17 123 17 123 2.76e-30 116
MS.gene21132.t1 MTR_2g034790 36.898 187 103 5 11 192 12 188 5.54e-30 116
MS.gene21132.t1 MTR_3g097450 48.148 108 54 2 17 123 17 123 6.17e-30 115
MS.gene21132.t1 MTR_0008s0470 41.304 138 77 3 11 146 13 148 6.66e-30 115
MS.gene21132.t1 MTR_8g031360 49.533 107 51 3 11 116 13 117 7.06e-30 115
MS.gene21132.t1 MTR_2g089420 42.254 142 67 3 1 142 1 127 1.42e-29 117
MS.gene21132.t1 MTR_6g012180 51.485 101 47 2 11 111 12 110 1.43e-29 115
MS.gene21132.t1 MTR_0008s0280 49.038 104 51 2 12 115 13 114 1.50e-29 112
MS.gene21132.t1 MTR_8g020490 50.485 103 49 2 9 111 6 106 1.89e-29 113
MS.gene21132.t1 MTR_0140s0030 50.943 106 49 3 11 115 13 116 2.71e-29 114
MS.gene21132.t1 MTR_0489s0020 50.943 106 49 3 11 115 13 116 2.71e-29 114
MS.gene21132.t1 MTR_4g097570 53.922 102 43 4 11 110 12 111 3.20e-29 113
MS.gene21132.t1 MTR_4g128670 51.961 102 46 3 11 111 12 111 3.27e-29 114
MS.gene21132.t1 MTR_4g100720 41.353 133 75 3 7 139 9 138 3.31e-29 110
MS.gene21132.t1 MTR_1g073170 47.321 112 57 2 4 115 13 122 3.86e-29 112
MS.gene21132.t1 MTR_7g010210 38.378 185 98 6 11 193 12 182 4.03e-29 112
MS.gene21132.t1 MTR_7g096930 48.571 105 52 2 11 115 12 114 5.46e-29 112
MS.gene21132.t1 MTR_8g027345 50.526 95 46 1 17 111 17 110 5.68e-29 113
MS.gene21132.t1 MTR_3g039990 49.524 105 51 2 11 115 13 115 6.25e-29 113
MS.gene21132.t1 MTR_7g087130 48.571 105 52 2 11 115 12 114 8.85e-29 113
MS.gene21132.t1 MTR_7g117730 47.368 95 49 1 17 111 17 110 1.52e-28 110
MS.gene21132.t1 MTR_8g017340 42.958 142 71 5 4 137 5 144 1.56e-28 115
MS.gene21132.t1 MTR_7g010210 38.378 185 98 6 11 193 12 182 1.64e-28 112
MS.gene21132.t1 MTR_3g083540 46.491 114 58 3 11 123 41 152 1.67e-28 112
MS.gene21132.t1 MTR_4g125520 34.510 255 141 11 11 248 12 257 1.74e-28 112
MS.gene21132.t1 MTR_1g100667 48.624 109 54 2 7 115 9 115 4.37e-28 110
MS.gene21132.t1 MTR_8g017350 42.254 142 72 5 4 137 5 144 5.89e-28 114
MS.gene21132.t1 MTR_6g055910 46.429 112 58 2 6 117 9 118 1.37e-27 108
MS.gene21132.t1 MTR_5g078140 46.957 115 58 3 11 124 12 124 2.00e-27 109
MS.gene21132.t1 MTR_8g017390 46.018 113 58 3 4 115 5 115 2.66e-27 111
MS.gene21132.t1 MTR_3g065440 46.957 115 58 3 11 124 12 124 2.79e-27 108
MS.gene21132.t1 MTR_1g045610 48.485 99 50 1 17 115 26 123 3.31e-27 107
MS.gene21132.t1 MTR_0063s0090 38.194 144 82 3 11 154 12 148 5.11e-27 105
MS.gene21132.t1 MTR_1g086510 44.037 109 59 2 11 119 21 127 6.55e-27 106
MS.gene21132.t1 MTR_4g102380 45.217 115 60 3 11 124 12 124 6.96e-27 107
MS.gene21132.t1 MTR_4g485530 47.573 103 52 2 13 115 14 114 8.08e-27 104
MS.gene21132.t1 MTR_2g067420 50.980 102 48 2 10 111 13 112 8.17e-27 107
MS.gene21132.t1 MTR_4g029540 39.873 158 85 6 11 167 10 158 8.56e-27 107
MS.gene21132.t1 MTR_0197s0010 46.078 102 54 1 14 115 3 103 1.01e-26 105
MS.gene21132.t1 MTR_7g109320 53.465 101 45 2 11 111 12 110 1.53e-26 107
MS.gene21132.t1 MTR_5g078910 44.860 107 57 2 9 115 5 109 2.90e-26 105
MS.gene21132.t1 MTR_0247s0040 46.154 104 54 2 11 114 7 108 3.32e-26 102
MS.gene21132.t1 MTR_1g062940 47.170 106 54 2 11 116 6 109 9.12e-26 102
MS.gene21132.t1 MTR_5g079120 44.954 109 57 3 8 115 57 163 1.90e-25 103
MS.gene21132.t1 MTR_5g078930 42.308 104 59 1 8 111 5 107 2.18e-25 101
MS.gene21132.t1 MTR_5g042030 44.737 114 60 3 11 123 7 118 3.39e-25 102
MS.gene21132.t1 MTR_2g033170 45.872 109 57 2 11 119 24 130 4.73e-25 103
MS.gene21132.t1 MTR_0193s0090 43.810 105 57 2 11 115 7 109 5.55e-25 100
MS.gene21132.t1 MTR_4g063100 41.803 122 66 3 5 123 1 120 6.61e-25 101
MS.gene21132.t1 MTR_5g079290 42.857 105 58 2 11 115 17 119 1.27e-24 100
MS.gene21132.t1 MTR_8g006470 44.954 109 57 3 11 118 10 116 3.05e-24 100
MS.gene21132.t1 MTR_5g078950 42.056 107 61 1 8 114 3 108 3.35e-24 99.4
MS.gene21132.t1 MTR_5g079220 42.056 107 60 2 9 115 19 123 1.37e-23 98.2
MS.gene21132.t1 MTR_8g060940 43.564 101 55 2 11 111 7 105 1.55e-23 97.4
MS.gene21132.t1 MTR_5g078860 43.810 105 57 2 11 115 7 109 2.99e-23 97.8
MS.gene21132.t1 MTR_5g078800 43.810 105 57 2 11 115 7 109 9.48e-23 95.5
MS.gene21132.t1 MTR_2g096380 42.727 110 61 2 6 115 1 108 1.75e-22 94.4
MS.gene21132.t1 MTR_7g017260 42.718 103 55 3 11 111 25 125 3.53e-22 94.4
MS.gene21132.t1 MTR_0001s0360 40.952 105 60 2 11 115 7 109 4.18e-22 93.6
MS.gene21132.t1 MTR_3g101290 42.453 106 59 2 17 122 40 143 4.95e-22 92.8
MS.gene21132.t1 MTR_4g123040 44.762 105 56 2 11 115 24 126 7.02e-22 94.4
MS.gene21132.t1 MTR_3g045430 38.211 123 73 3 2 123 4 124 2.43e-21 92.4
MS.gene21132.t1 MTR_5g016510 46.000 100 51 3 17 115 8 105 2.97e-21 92.4
MS.gene21132.t1 MTR_7g111290 56.716 67 28 1 44 110 2 67 3.30e-21 92.8
MS.gene21132.t1 MTR_3g077650 38.710 124 72 3 17 138 184 305 2.36e-20 91.3
MS.gene21132.t1 MTR_6g015455 45.745 94 49 2 17 110 8 99 2.41e-20 92.4
MS.gene21132.t1 MTR_5g070020 42.202 109 60 3 7 115 116 221 3.27e-20 90.1
MS.gene21132.t1 MTR_3g463400 41.441 111 62 3 6 116 126 233 3.30e-20 90.9
MS.gene21132.t1 MTR_4g105660 28.333 240 141 7 17 228 183 419 3.93e-20 90.5
MS.gene21132.t1 MTR_7g035350 44.444 99 53 2 16 114 227 323 4.33e-20 90.5
MS.gene21132.t1 MTR_5g007300 51.316 76 36 1 11 86 64 138 4.51e-20 85.1
MS.gene21132.t1 MTR_4g019370 39.316 117 67 3 17 133 41 153 1.29e-19 88.2
MS.gene21132.t1 MTR_6g055910 49.315 73 36 1 45 117 18 89 5.17e-19 85.1
MS.gene21132.t1 MTR_4g063100 51.389 72 34 1 44 115 10 80 8.78e-19 84.0
MS.gene21132.t1 MTR_5g049190 41.414 99 56 2 17 115 22 118 1.15e-18 84.0
MS.gene21132.t1 MTR_6g027340 37.736 106 64 2 17 122 19 122 1.48e-18 82.8
MS.gene21132.t1 MTR_6g074860 41.176 102 55 3 17 115 7 106 1.77e-18 83.2
MS.gene21132.t1 MTR_4g094982 43.000 100 54 3 17 115 8 105 7.81e-18 82.0
MS.gene21132.t1 MTR_2g096380 50.000 72 35 1 44 115 19 89 1.54e-17 80.1
MS.gene21132.t1 MTR_6g027360 35.897 117 72 3 8 124 73 186 1.85e-17 81.6
MS.gene21132.t1 MTR_7g451170 39.000 100 59 2 17 116 194 291 1.94e-17 82.8
MS.gene21132.t1 MTR_5g010650 40.952 105 59 3 6 110 103 204 4.66e-17 81.6
MS.gene21132.t1 MTR_4g088015 40.000 100 58 2 17 116 224 321 4.76e-17 81.6
MS.gene21132.t1 MTR_7g061330 34.839 155 90 5 6 152 70 221 6.18e-17 81.6
MS.gene21132.t1 MTR_7g061330 34.286 105 60 3 9 110 22 120 1.40e-12 68.6
MS.gene21132.t1 MTR_7g061330 34.839 155 90 5 6 152 106 257 6.43e-17 81.6
MS.gene21132.t1 MTR_7g061330 34.286 105 60 3 9 110 58 156 1.38e-12 68.6
MS.gene21132.t1 MTR_7g461410 34.839 155 90 5 6 152 106 257 6.43e-17 81.6
MS.gene21132.t1 MTR_7g461410 34.286 105 60 3 9 110 58 156 1.38e-12 68.6
MS.gene21132.t1 MTR_5g082910 41.053 95 54 2 17 111 22 114 1.09e-16 79.3
MS.gene21132.t1 MTR_1g057980 39.423 104 60 3 11 114 78 178 1.68e-16 79.0
MS.gene21132.t1 MTR_3g110028 38.182 110 65 3 6 115 78 184 3.21e-16 79.7
MS.gene21132.t1 MTR_3g110028 36.449 107 56 3 9 110 29 128 2.51e-14 73.9
MS.gene21132.t1 MTR_7g037260 36.634 101 62 2 17 117 148 246 3.58e-16 78.6
MS.gene21132.t1 MTR_7g061550 37.273 110 66 2 11 118 4 112 4.24e-16 78.2
MS.gene21132.t1 MTR_1g026870 36.364 110 67 3 6 115 78 184 1.46e-15 77.8
MS.gene21132.t1 MTR_1g026870 35.514 107 57 3 9 110 29 128 5.87e-14 73.2
MS.gene21132.t1 MTR_0023s0210 45.070 71 38 1 11 81 7 76 3.89e-15 70.1
MS.gene21132.t1 MTR_4g082040 37.500 104 60 3 17 117 108 209 3.94e-15 75.9
MS.gene21132.t1 MTR_3g089045 38.462 104 59 3 17 117 19 120 8.23e-15 73.9
MS.gene21132.t1 MTR_5g038910 33.824 136 84 3 7 142 19 148 1.21e-14 74.3
MS.gene21132.t1 MTR_6g027370 32.824 131 86 2 8 138 93 221 1.26e-14 73.9
MS.gene21132.t1 MTR_7g450950 35.714 98 61 2 17 114 160 255 1.39e-14 73.6
MS.gene21132.t1 MTR_5g038910 33.824 136 84 3 7 142 19 148 1.47e-14 74.3
MS.gene21132.t1 MTR_5g041570 36.538 104 61 3 17 117 137 238 1.53e-14 74.3
MS.gene21132.t1 MTR_7g037130 36.735 98 60 2 17 114 148 243 2.65e-14 73.2
MS.gene21132.t1 MTR_7g086960 35.185 108 68 2 17 124 92 197 3.54e-13 69.7
MS.gene21132.t1 MTR_8g468380 32.174 115 76 2 7 121 15 127 1.30e-12 68.6
MS.gene21132.t1 MTR_6g013135 29.534 193 91 7 97 285 148 299 1.50e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21132.t1 AT2G26960 46.541 159 73 5 9 157 18 174 1.03e-38 142
MS.gene21132.t1 AT5G06100 55.000 120 52 2 11 130 32 149 1.23e-38 142
MS.gene21132.t1 AT5G06100 55.000 120 52 2 11 130 32 149 2.80e-38 142
MS.gene21132.t1 AT5G06100 55.000 120 52 2 11 130 32 149 2.80e-38 142
MS.gene21132.t1 AT5G06100 55.000 120 52 2 11 130 32 149 2.80e-38 142
MS.gene21132.t1 AT5G06100 55.000 120 52 2 11 130 32 149 2.80e-38 142
MS.gene21132.t1 AT2G32460 43.125 160 80 3 6 165 1 149 5.92e-38 140
MS.gene21132.t1 AT2G32460 42.073 164 84 3 2 165 9 161 8.71e-38 140
MS.gene21132.t1 AT5G55020 52.542 118 54 2 11 128 26 141 1.57e-37 140
MS.gene21132.t1 AT3G11440 52.459 122 56 2 11 132 41 160 1.75e-37 139
MS.gene21132.t1 AT3G11440 52.459 122 56 2 11 132 41 160 5.03e-37 139
MS.gene21132.t1 AT3G11440 52.459 122 56 2 11 132 41 160 5.03e-37 139
MS.gene21132.t1 AT3G11440 52.459 122 56 2 11 132 41 160 5.03e-37 139
MS.gene21132.t1 AT4G26930 52.174 115 53 2 11 125 19 131 1.45e-36 135
MS.gene21132.t1 AT4G21440 36.052 233 137 7 11 236 12 239 5.90e-36 133
MS.gene21132.t1 AT5G26660 48.529 136 67 3 4 138 5 138 6.40e-36 132
MS.gene21132.t1 AT4G01680 48.413 126 62 3 4 128 5 128 2.29e-34 125
MS.gene21132.t1 AT2G26950 49.194 124 62 1 5 128 9 131 2.34e-34 129
MS.gene21132.t1 AT1G57560 50.820 122 57 3 4 124 5 124 3.48e-34 126
MS.gene21132.t1 AT5G54230 40.828 169 92 4 11 173 12 178 6.88e-34 126
MS.gene21132.t1 AT1G57560 50.820 122 57 3 4 124 5 124 7.18e-34 126
MS.gene21132.t1 AT4G28110 52.174 115 52 3 11 124 12 124 1.75e-33 124
MS.gene21132.t1 AT4G01680 50.000 122 58 3 4 124 5 124 1.84e-33 125
MS.gene21132.t1 AT4G05100 52.632 114 51 3 11 123 13 124 2.25e-33 125
MS.gene21132.t1 AT1G09540 50.413 121 57 3 4 123 5 123 8.27e-33 125
MS.gene21132.t1 AT3G61250 49.123 114 55 3 11 123 12 123 1.01e-32 123
MS.gene21132.t1 AT3G08500 52.830 106 48 2 10 115 29 132 1.34e-32 124
MS.gene21132.t1 AT5G12870 50.435 115 55 2 1 115 8 120 1.42e-32 122
MS.gene21132.t1 AT5G16770 33.721 258 146 11 11 253 12 259 3.01e-32 122
MS.gene21132.t1 AT5G16770 33.721 258 146 11 11 253 12 259 3.01e-32 122
MS.gene21132.t1 AT5G16770 32.692 260 146 10 11 253 12 259 4.33e-32 122
MS.gene21132.t1 AT5G16770 32.692 260 146 10 11 253 12 259 4.33e-32 122
MS.gene21132.t1 AT4G37780 52.830 106 47 3 11 115 12 115 4.48e-32 121
MS.gene21132.t1 AT1G74080 38.251 183 85 7 11 169 12 190 4.93e-32 122
MS.gene21132.t1 AT3G13890 49.107 112 55 2 4 115 5 114 5.53e-32 122
MS.gene21132.t1 AT5G10280 50.435 115 54 3 11 124 12 124 1.41e-31 120
MS.gene21132.t1 AT3G02940 51.429 105 49 2 11 115 12 114 2.33e-31 119
MS.gene21132.t1 AT5G56110 48.696 115 56 3 11 124 12 124 2.69e-31 119
MS.gene21132.t1 AT3G02940 51.429 105 49 2 11 115 12 114 4.70e-31 119
MS.gene21132.t1 AT3G02940 51.429 105 49 2 11 115 12 114 4.70e-31 119
MS.gene21132.t1 AT1G22640 48.246 114 56 3 11 123 12 123 5.45e-31 117
MS.gene21132.t1 AT1G63910 48.696 115 57 2 4 118 5 117 5.66e-31 120
MS.gene21132.t1 AT5G14750 50.962 104 49 2 8 111 13 114 5.74e-31 115
MS.gene21132.t1 AT5G23000 52.336 107 48 3 10 115 11 115 5.81e-31 119
MS.gene21132.t1 AT3G28470 54.455 101 44 2 11 111 12 110 5.87e-31 119
MS.gene21132.t1 AT5G15310 49.524 105 51 2 11 115 12 114 5.90e-31 117
MS.gene21132.t1 AT4G09460 48.148 108 54 2 17 123 17 123 6.70e-31 116
MS.gene21132.t1 AT4G38620 50.000 108 52 2 17 123 17 123 8.37e-31 117
MS.gene21132.t1 AT3G49690 53.774 106 46 3 11 115 12 115 9.23e-31 118
MS.gene21132.t1 AT3G01140 46.957 115 58 3 11 124 12 124 1.04e-30 119
MS.gene21132.t1 AT3G01140 46.957 115 58 3 11 124 55 167 1.24e-30 119
MS.gene21132.t1 AT5G65230 50.435 115 54 3 11 124 12 124 1.33e-30 117
MS.gene21132.t1 AT5G52600 42.143 140 69 4 11 140 12 149 1.61e-30 114
MS.gene21132.t1 AT1G34670 49.565 115 55 3 11 124 12 124 1.66e-30 118
MS.gene21132.t1 AT3G13540 45.528 123 64 3 2 123 14 134 1.67e-30 115
MS.gene21132.t1 AT1G35515 49.074 108 53 2 17 123 17 123 1.84e-30 114
MS.gene21132.t1 AT3G12720 45.833 120 62 3 10 128 21 138 2.42e-30 117
MS.gene21132.t1 AT3G01530 37.419 155 92 2 4 154 13 166 2.65e-30 114
MS.gene21132.t1 AT5G15310 46.957 115 58 3 11 124 12 124 2.66e-30 117
MS.gene21132.t1 AT4G34990 48.148 108 54 2 17 123 17 123 2.84e-30 116
MS.gene21132.t1 AT5G57620 51.887 106 48 3 11 115 12 115 2.84e-30 117
MS.gene21132.t1 AT5G15310 46.957 115 58 3 11 124 12 124 3.31e-30 117
MS.gene21132.t1 AT4G17785 50.000 108 52 2 8 115 10 115 3.33e-30 117
MS.gene21132.t1 AT4G17785 50.000 108 52 2 8 115 10 115 3.33e-30 117
MS.gene21132.t1 AT3G27920 50.000 108 52 2 8 115 11 116 3.72e-30 114
MS.gene21132.t1 AT2G36890 47.414 116 58 3 11 125 12 125 3.97e-30 116
MS.gene21132.t1 AT3G27810 50.000 106 51 2 11 116 20 123 4.32e-30 114
MS.gene21132.t1 AT4G01680 45.865 133 57 4 4 123 5 135 4.36e-30 117
MS.gene21132.t1 AT2G16720 48.148 108 54 2 17 123 17 123 4.96e-30 115
MS.gene21132.t1 AT2G36890 47.414 116 58 3 11 125 53 166 5.51e-30 116
MS.gene21132.t1 AT1G18710 45.217 115 60 3 11 124 12 124 5.79e-30 115
MS.gene21132.t1 AT3G23250 48.571 105 52 2 11 115 12 114 5.97e-30 115
MS.gene21132.t1 AT5G40350 49.057 106 52 2 11 116 17 120 6.97e-30 113
MS.gene21132.t1 AT1G74650 49.524 105 51 2 11 115 12 114 7.24e-30 116
MS.gene21132.t1 AT5G40330 44.800 125 65 3 12 136 13 133 8.32e-30 113
MS.gene21132.t1 AT5G62470 45.255 137 68 4 11 146 12 142 8.99e-30 116
MS.gene21132.t1 AT5G65790 52.830 106 47 3 11 115 12 115 1.11e-29 116
MS.gene21132.t1 AT1G06180 49.541 109 53 2 11 119 12 118 1.15e-29 113
MS.gene21132.t1 AT1G18570 45.614 114 59 3 11 123 13 124 3.36e-29 115
MS.gene21132.t1 AT3G13890 45.455 121 55 3 4 115 5 123 4.09e-29 115
MS.gene21132.t1 AT1G16490 49.057 106 52 2 10 115 13 116 5.54e-29 112
MS.gene21132.t1 AT1G74430 45.217 115 60 3 11 124 12 124 5.95e-29 112
MS.gene21132.t1 AT1G48000 48.039 102 52 1 17 118 37 137 6.17e-29 111
MS.gene21132.t1 AT3G47600 48.571 105 52 2 11 115 12 114 7.68e-29 113
MS.gene21132.t1 AT1G56160 49.057 106 52 2 10 115 13 116 9.03e-29 112
MS.gene21132.t1 AT1G08810 48.571 105 52 2 11 115 12 114 1.13e-28 112
MS.gene21132.t1 AT3G28910 49.524 105 51 2 11 115 12 114 1.17e-28 112
MS.gene21132.t1 AT5G07690 47.619 105 53 2 11 115 12 114 1.18e-28 113
MS.gene21132.t1 AT2G47460 50.495 101 48 2 11 111 12 110 1.40e-28 113
MS.gene21132.t1 AT2G47190 46.789 109 56 2 11 119 20 126 1.51e-28 111
MS.gene21132.t1 AT1G79180 45.763 118 60 3 10 125 13 128 1.70e-28 111
MS.gene21132.t1 AT1G68320 35.176 199 112 6 8 192 16 211 2.04e-28 111
MS.gene21132.t1 AT2G31180 46.667 105 54 2 11 115 12 114 2.18e-28 110
MS.gene21132.t1 AT5G62470 45.255 137 67 5 11 146 12 141 2.42e-28 112
MS.gene21132.t1 AT3G62610 49.505 101 49 2 11 111 12 110 2.98e-28 112
MS.gene21132.t1 AT5G62320 47.107 121 54 4 11 123 13 131 3.31e-28 109
MS.gene21132.t1 AT5G14340 48.246 114 56 3 11 123 24 135 3.36e-28 110
MS.gene21132.t1 AT5G60890 37.662 154 82 5 11 152 12 163 3.67e-28 110
MS.gene21132.t1 AT5G61420 44.348 115 61 3 11 124 12 124 4.05e-28 112
MS.gene21132.t1 AT5G49330 50.495 101 48 2 11 111 12 110 4.18e-28 111
MS.gene21132.t1 AT5G07700 46.667 105 54 2 11 115 12 114 4.47e-28 111
MS.gene21132.t1 AT5G07700 46.667 105 54 2 11 115 12 114 4.47e-28 111
MS.gene21132.t1 AT3G12820 48.113 106 53 2 10 115 13 116 6.17e-28 108
MS.gene21132.t1 AT1G25340 46.602 103 54 1 17 119 23 124 6.48e-28 110
MS.gene21132.t1 AT5G35550 44.737 114 61 2 2 115 5 116 7.56e-28 109
MS.gene21132.t1 AT1G66230 47.826 115 57 3 11 124 12 124 9.22e-28 109
MS.gene21132.t1 AT4G13480 46.957 115 56 2 17 131 11 120 9.32e-28 108
MS.gene21132.t1 AT5G16600 46.957 115 58 3 11 124 12 124 2.36e-27 109
MS.gene21132.t1 AT3G24310 48.485 99 50 1 17 115 23 120 1.46e-26 105
MS.gene21132.t1 AT3G30210 46.078 102 54 1 17 118 32 132 3.17e-26 105
MS.gene21132.t1 AT3G60460 44.954 109 57 3 11 118 11 117 2.03e-25 103
MS.gene21132.t1 AT4G22680 44.348 115 61 3 11 124 12 124 2.97e-25 102
MS.gene21132.t1 AT3G48920 43.636 110 61 1 6 115 12 120 3.97e-25 102
MS.gene21132.t1 AT4G12350 42.609 115 65 1 1 115 1 114 6.73e-25 102
MS.gene21132.t1 AT1G66370 43.636 110 59 3 9 117 6 113 7.60e-25 100
MS.gene21132.t1 AT1G66380 43.750 112 60 3 7 117 4 113 1.22e-24 97.4
MS.gene21132.t1 AT3G06490 47.706 109 55 2 11 119 19 125 1.32e-24 102
MS.gene21132.t1 AT5G26660 46.535 101 52 2 39 138 8 107 1.38e-24 101
MS.gene21132.t1 AT1G25340 44.660 103 51 2 17 119 23 119 2.66e-24 100
MS.gene21132.t1 AT1G25340 44.660 103 51 2 17 119 23 119 3.57e-24 100
MS.gene21132.t1 AT1G66390 42.857 112 61 3 7 117 4 113 9.11e-24 98.2
MS.gene21132.t1 AT1G56650 39.062 128 67 4 7 125 4 129 9.69e-24 97.8
MS.gene21132.t1 AT5G59780 43.519 108 60 1 17 124 13 119 1.21e-23 97.4
MS.gene21132.t1 AT5G52260 45.217 115 62 1 1 115 1 114 2.10e-23 97.4
MS.gene21132.t1 AT4G25560 44.860 107 57 2 9 115 8 112 3.24e-23 97.4
MS.gene21132.t1 AT1G79180 36.424 151 59 4 10 125 13 161 3.88e-23 97.8
MS.gene21132.t1 AT5G49620 45.631 103 55 1 17 119 31 132 4.01e-23 97.4
MS.gene21132.t1 AT3G46130 45.455 99 53 1 17 115 14 111 4.23e-23 96.3
MS.gene21132.t1 AT3G53200 44.860 107 57 2 11 117 9 113 5.53e-23 95.5
MS.gene21132.t1 AT4G18770 40.441 136 73 4 9 138 208 341 3.91e-22 96.3
MS.gene21132.t1 AT5G49620 41.379 116 55 1 17 119 31 146 6.55e-22 94.4
MS.gene21132.t1 AT3G50060 42.453 106 59 2 17 122 9 112 2.34e-21 92.4
MS.gene21132.t1 AT5G40350 52.703 74 34 1 43 116 3 75 2.75e-21 89.4
MS.gene21132.t1 AT3G27810 54.167 72 32 1 45 116 4 74 7.05e-21 88.6
MS.gene21132.t1 AT3G27785 42.718 103 56 3 17 118 192 292 2.41e-20 91.3
MS.gene21132.t1 AT4G37260 43.925 107 57 3 17 122 16 120 3.21e-20 89.7
MS.gene21132.t1 AT5G58850 43.119 109 59 3 7 115 99 204 1.41e-19 89.0
MS.gene21132.t1 AT5G67300 46.000 100 51 3 17 115 9 106 1.56e-19 87.4
MS.gene21132.t1 AT2G23290 44.000 100 53 3 17 115 16 113 2.64e-19 87.0
MS.gene21132.t1 AT5G40360 40.404 99 57 2 17 115 161 257 4.59e-19 87.0
MS.gene21132.t1 AT5G11050 34.078 179 103 5 9 175 101 276 5.18e-19 87.4
MS.gene21132.t1 AT2G39880 38.931 131 76 3 17 145 53 181 6.71e-19 86.7
MS.gene21132.t1 AT1G17950 40.367 109 61 3 17 123 8 114 9.84e-19 84.3
MS.gene21132.t1 AT3G53200 50.685 73 35 1 45 117 9 80 1.60e-18 82.8
MS.gene21132.t1 AT5G35550 53.521 71 32 1 45 115 50 119 1.79e-18 84.0
MS.gene21132.t1 AT3G12820 53.731 67 30 1 49 115 3 68 2.97e-18 81.6
MS.gene21132.t1 AT2G25230 36.641 131 74 5 5 128 13 141 9.74e-18 81.3
MS.gene21132.t1 AT5G14750 44.578 83 40 2 38 115 3 84 1.34e-17 79.3
MS.gene21132.t1 AT3G46130 50.000 72 35 1 44 115 9 79 2.06e-17 80.1
MS.gene21132.t1 AT4G33450 37.736 106 64 2 17 122 22 125 2.50e-17 80.5
MS.gene21132.t1 AT3G09370 36.054 147 89 5 6 150 128 271 2.71e-17 82.8
MS.gene21132.t1 AT3G09370 36.275 102 62 2 9 110 80 178 1.04e-13 72.0
MS.gene21132.t1 AT3G09370 36.054 147 89 5 6 150 123 266 2.95e-17 82.4
MS.gene21132.t1 AT3G09370 36.275 102 62 2 9 110 75 173 1.10e-13 72.0
MS.gene21132.t1 AT3G09370 36.054 147 89 5 6 150 136 279 3.08e-17 82.4
MS.gene21132.t1 AT3G09370 36.275 102 62 2 9 110 88 186 1.44e-13 71.6
MS.gene21132.t1 AT5G59780 46.250 80 42 1 45 124 20 98 5.27e-17 78.6
MS.gene21132.t1 AT3G46130 50.704 71 34 1 45 115 20 89 6.83e-17 79.0
MS.gene21132.t1 AT3G55730 39.623 106 62 2 10 115 52 155 7.34e-17 80.9
MS.gene21132.t1 AT3G47600 47.887 71 36 1 45 115 39 108 1.90e-16 79.0
MS.gene21132.t1 AT3G09230 36.000 100 62 2 17 116 58 155 4.75e-16 78.6
MS.gene21132.t1 AT5G02320 37.273 110 66 3 6 115 60 166 1.28e-15 77.8
MS.gene21132.t1 AT5G02320 34.906 106 58 3 9 110 12 110 3.06e-13 70.5
MS.gene21132.t1 AT5G17800 37.168 113 65 3 17 125 96 206 1.32e-15 76.6
MS.gene21132.t1 AT5G02320 37.273 110 66 3 6 115 120 226 1.33e-15 77.8
MS.gene21132.t1 AT5G02320 34.906 106 58 3 9 110 72 170 2.78e-13 70.9
MS.gene21132.t1 AT5G02320 37.273 110 66 3 6 115 120 226 1.33e-15 77.8
MS.gene21132.t1 AT5G02320 34.906 106 58 3 9 110 72 170 2.78e-13 70.9
MS.gene21132.t1 AT1G73410 39.252 107 63 2 17 123 9 113 1.37e-15 74.7
MS.gene21132.t1 AT1G73410 39.252 107 63 2 17 123 9 113 1.62e-15 75.1
MS.gene21132.t1 AT2G37630 39.091 110 64 2 11 118 1 109 1.67e-15 76.6
MS.gene21132.t1 AT4G32730 37.273 110 66 3 6 115 80 186 1.87e-15 77.4
MS.gene21132.t1 AT4G32730 34.579 107 58 3 9 110 31 130 3.02e-13 70.9
MS.gene21132.t1 AT1G66380 46.667 75 38 2 44 117 7 80 2.05e-15 71.6
MS.gene21132.t1 AT4G32730 37.273 110 66 3 6 115 80 186 2.37e-15 77.4
MS.gene21132.t1 AT4G32730 34.579 107 58 3 9 110 31 130 3.95e-13 70.5
MS.gene21132.t1 AT4G32730 37.273 110 66 3 6 115 80 186 2.37e-15 77.4
MS.gene21132.t1 AT4G32730 34.579 107 58 3 9 110 31 130 3.95e-13 70.5
MS.gene21132.t1 AT4G32730 37.273 110 66 3 6 115 80 186 2.37e-15 77.4
MS.gene21132.t1 AT4G32730 34.579 107 58 3 9 110 31 130 3.95e-13 70.5
MS.gene21132.t1 AT4G32730 37.273 110 66 3 6 115 80 186 2.37e-15 77.4
MS.gene21132.t1 AT4G32730 34.579 107 58 3 9 110 31 130 3.95e-13 70.5
MS.gene21132.t1 AT1G26780 36.190 105 64 3 17 120 101 203 2.41e-15 75.5
MS.gene21132.t1 AT1G26780 36.538 104 63 3 17 119 101 202 2.54e-15 76.3
MS.gene21132.t1 AT1G69560 38.000 100 57 3 17 113 110 207 2.72e-15 75.9
MS.gene21132.t1 AT1G69560 38.000 100 57 3 17 113 126 223 2.74e-15 75.9
MS.gene21132.t1 AT4G00540 35.971 139 77 6 6 139 96 227 5.04e-15 75.5
MS.gene21132.t1 AT4G00540 35.971 139 77 6 6 139 94 225 5.56e-15 75.5
MS.gene21132.t1 AT5G11510 35.455 110 68 3 6 115 74 180 6.41e-15 75.9
MS.gene21132.t1 AT5G11510 34.314 102 65 2 9 110 25 124 1.31e-12 68.9
MS.gene21132.t1 AT5G11510 35.455 110 68 3 6 115 74 180 6.58e-15 75.9
MS.gene21132.t1 AT5G11510 34.314 102 65 2 9 110 25 124 1.28e-12 68.9
MS.gene21132.t1 AT5G11510 35.455 110 68 3 6 115 74 180 6.58e-15 75.9
MS.gene21132.t1 AT5G11510 34.314 102 65 2 9 110 25 124 1.28e-12 68.9
MS.gene21132.t1 AT5G11510 35.455 110 68 3 6 115 74 180 6.58e-15 75.9
MS.gene21132.t1 AT5G11510 34.314 102 65 2 9 110 25 124 1.28e-12 68.9
MS.gene21132.t1 AT5G11510 35.455 110 68 3 6 115 74 180 6.73e-15 75.9
MS.gene21132.t1 AT5G11510 34.314 102 65 2 9 110 25 124 1.40e-12 68.9
MS.gene21132.t1 AT1G66380 44.118 68 37 1 7 74 4 70 1.91e-14 68.9
MS.gene21132.t1 AT1G14350 36.283 113 70 2 7 119 18 128 2.09e-14 73.9
MS.gene21132.t1 AT1G14350 36.283 113 70 2 7 119 18 128 2.09e-14 73.9
MS.gene21132.t1 AT3G29020 37.500 104 60 3 17 117 68 169 3.40e-14 71.2
MS.gene21132.t1 AT3G29020 37.500 104 60 3 17 117 70 171 5.17e-14 71.6
MS.gene21132.t1 AT2G02820 35.398 113 71 2 7 119 23 133 6.27e-14 72.4
MS.gene21132.t1 AT2G02820 35.398 113 71 2 7 119 23 133 6.62e-14 72.4
MS.gene21132.t1 AT2G02820 35.398 113 71 2 7 119 23 133 1.26e-13 70.9
MS.gene21132.t1 AT5G40430 36.283 113 65 4 7 115 43 152 2.74e-13 68.9
MS.gene21132.t1 AT1G22640 50.000 66 31 2 59 123 2 66 1.61e-12 65.9
MS.gene21132.t1 AT3G18100 39.604 101 52 4 12 109 384 478 2.14e-12 68.2
MS.gene21132.t1 AT3G18100 39.604 101 52 4 12 109 332 426 2.29e-12 68.2
MS.gene21132.t1 AT3G18100 39.604 101 52 4 12 109 497 591 2.65e-12 67.8
MS.gene21132.t1 AT3G18100 39.604 101 52 4 12 109 545 639 2.70e-12 67.8
MS.gene21132.t1 AT5G39700 36.893 103 63 2 9 111 51 151 7.83e-12 63.5
MS.gene21132.t1 AT3G23250 49.123 57 28 1 59 115 2 57 1.97e-11 63.2

Find 69 sgRNAs with CRISPR-Local

Find 86 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTGAAAACTGCTTATT+TGG 0.104393 1.4:-67929354 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1.4:+67929648 MS.gene21132:CDS
CAGATACCAGAAGTTAAATT+TGG 0.178249 1.4:+67929297 MS.gene21132:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1.4:-67928770 None:intergenic
CATCGTTGGTTACTAATAAA+AGG 0.216843 1.4:+67928677 MS.gene21132:CDS
GGAACCCTTATACGGATATT+TGG 0.228598 1.4:+67929895 MS.gene21132:CDS
CTACTTCAACTTTGATTGAT+AGG 0.246409 1.4:+67929418 MS.gene21132:CDS
TCAAACCAAATATCCGTATA+AGG 0.249713 1.4:-67929900 None:intergenic
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1.4:-67929148 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1.4:+67929581 MS.gene21132:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1.4:+67929151 MS.gene21132:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1.4:-67929747 None:intergenic
TGGTTTGAGGAACCCTTATA+CGG 0.340488 1.4:+67929887 MS.gene21132:CDS
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1.4:-67929138 None:intergenic
TATTTGAAAACTGCTTATTT+GGG 0.371336 1.4:-67929353 None:intergenic
TGATTTCCAAATTTAACTTC+TGG 0.372019 1.4:-67929303 None:intergenic
AACGCGTCATTCCAAAATTC+CGG 0.377639 1.4:-67929659 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.394386 1.4:+67929835 MS.gene21132:CDS
GAAGAAGGCAATTGCTTTGG+AGG 0.406913 1.4:+67929838 MS.gene21132:CDS
TTGATGAAAGCCAGGTCATT+TGG 0.408351 1.4:+67929867 MS.gene21132:CDS
CAAACCAAATATCCGTATAA+GGG 0.421526 1.4:-67929899 None:intergenic
TCAACCAGTTCCATGTTGTC+AGG 0.424194 1.4:-67929219 None:intergenic
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1.4:-67928874 None:intergenic
AAGGCATCATTAAAATCATA+TGG 0.427844 1.4:-67929728 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1.4:+67929781 MS.gene21132:CDS
CTAAGTTTGGTGAGTTCAGA+TGG 0.440163 1.4:+67928917 MS.gene21132:CDS
AAGCCAGGTCATTTGGTTTG+AGG 0.452339 1.4:+67929874 MS.gene21132:CDS
AAATATGTTCTTCAATAATG+TGG 0.453078 1.4:+67929371 MS.gene21132:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.455161 1.4:-67929785 None:intergenic
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1.4:+67929565 MS.gene21132:CDS
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1.4:+67929551 MS.gene21132:intron
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1.4:+67928698 MS.gene21132:CDS
CTTCCCTGACAACATGGAAC+TGG 0.459486 1.4:+67929215 MS.gene21132:CDS
AACGGACCCTTCTTTACATC+AGG 0.460974 1.4:-67928856 None:intergenic
GACAACATGGAACTGGTTGA+TGG 0.462281 1.4:+67929222 MS.gene21132:CDS
AGATGTCAGAGATAAATAAC+TGG 0.463955 1.4:+67929816 MS.gene21132:CDS
TCTACGACCTGATGTAAAGA+AGG 0.489579 1.4:+67928849 MS.gene21132:CDS
ACATGACGACATAATGAATC+CGG 0.500403 1.4:+67929640 MS.gene21132:CDS
GAGTATTATACCATCTAAAA+CGG 0.511421 1.4:-67928828 None:intergenic
AAGGCAATTGCTTTGGAGGA+AGG 0.515313 1.4:+67929842 MS.gene21132:CDS
GATGGTTTGAAGAGTAGTAA+TGG 0.516640 1.4:+67929240 MS.gene21132:CDS
CAGTTCCATGTTGTCAGGGA+AGG 0.525681 1.4:-67929214 None:intergenic
GTCACCCTTCCCTGACAACA+TGG 0.529510 1.4:+67929209 MS.gene21132:CDS
TAACATCATGACTTCATCGT+TGG 0.529999 1.4:+67928663 None:intergenic
ACTAATAAAAGGTTGAAGAA+AGG 0.530614 1.4:+67928688 MS.gene21132:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1.4:+67929372 MS.gene21132:CDS
GGAAGGTGTTGATGAAAGCC+AGG 0.532700 1.4:+67929859 MS.gene21132:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1.4:+67929823 MS.gene21132:CDS
GCTTCAACATCGTTCTCCAA+AGG 0.546850 1.4:-67929611 None:intergenic
GATTCATTATGTCGTCATGT+AGG 0.551510 1.4:-67929637 None:intergenic
TGTTGAGTCTCCATAGGTGG+TGG 0.552970 1.4:-67929791 None:intergenic
TCCATAGGTGGTGGGAGTGG+AGG 0.563890 1.4:-67929782 None:intergenic
AGTTCCATGTTGTCAGGGAA+GGG 0.564461 1.4:-67929213 None:intergenic
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1.4:+67929552 MS.gene21132:intron
ACATGGAACCGGAAATTGGA+AGG 0.586011 1.4:+67928762 MS.gene21132:CDS
TGAGTTCAGATGGTCTAAGA+TGG 0.590717 1.4:+67928927 MS.gene21132:CDS
CAACCAGTTCCATGTTGTCA+GGG 0.591829 1.4:-67929218 None:intergenic
GTTCAGCACATTAGTCAATG+AGG 0.605495 1.4:+67929679 MS.gene21132:CDS
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1.4:+67928936 MS.gene21132:CDS
GTTCCTCAAACCAAATGACC+TGG 0.626263 1.4:-67929877 None:intergenic
GTTGAGTCTCCATAGGTGGT+GGG 0.628088 1.4:-67929790 None:intergenic
CTACGACCTGATGTAAAGAA+GGG 0.647996 1.4:+67928850 MS.gene21132:CDS
ATCTGATGTTGAGTCTCCAT+AGG 0.660577 1.4:-67929797 None:intergenic
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1.4:+67928780 MS.gene21132:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1.4:+67929183 MS.gene21132:CDS
TGATGTTGAGTCTCCATAGG+TGG 0.669883 1.4:-67929794 None:intergenic
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1.4:+67928765 MS.gene21132:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1.4:+67928796 MS.gene21132:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1.4:+67928781 MS.gene21132:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CGGAAAATTATTATTAATAT+CGG - chr1.4:67929500-67929519 None:intergenic 15.0%
!! AAATATGTTCTTCAATAATG+TGG + chr1.4:67929371-67929390 MS.gene21132:CDS 20.0%
!! AATATGTTCTTCAATAATGT+GGG + chr1.4:67929372-67929391 MS.gene21132:CDS 20.0%
!! ATATTTGAAAACTGCTTATT+TGG - chr1.4:67929357-67929376 None:intergenic 20.0%
!! ATTAAAATTAATGACACAAG+TGG - chr1.4:67929091-67929110 None:intergenic 20.0%
!! GATGTATATATAAAAGAGAA+TGG - chr1.4:67929466-67929485 None:intergenic 20.0%
!! TATTTGAAAACTGCTTATTT+GGG - chr1.4:67929356-67929375 None:intergenic 20.0%
!!! TTTGAGTTATTTTCTAAGTT+TGG + chr1.4:67928904-67928923 MS.gene21132:CDS 20.0%
! AAAAGAAAACATGAAAGACA+TGG + chr1.4:67929183-67929202 MS.gene21132:CDS 25.0%
! AAAGCATATGTTGAAAAACA+TGG + chr1.4:67928745-67928764 MS.gene21132:CDS 25.0%
! AAAGTTCTTGATGTCATTAT+CGG - chr1.4:67929151-67929170 None:intergenic 25.0%
! AACATGTGATCTAATGAATA+TGG - chr1.4:67929026-67929045 None:intergenic 25.0%
! ACTAATAAAAGGTTGAAGAA+AGG + chr1.4:67928688-67928707 MS.gene21132:CDS 25.0%
! GAGTATTATACCATCTAAAA+CGG - chr1.4:67928831-67928850 None:intergenic 25.0%
! TCTTCTTCTTCTTTACTAAA+CGG - chr1.4:67928877-67928896 None:intergenic 25.0%
!! AAGGCATCATTAAAATCATA+TGG - chr1.4:67929731-67929750 None:intergenic 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr1.4:67929151-67929170 MS.gene21132:CDS 25.0%
!! GTAGTAATGGAAAAAGAATA+AGG + chr1.4:67929253-67929272 MS.gene21132:CDS 25.0%
!! TGATTTCCAAATTTAACTTC+TGG - chr1.4:67929306-67929325 None:intergenic 25.0%
!!! AATTACTTTCATCGATTTCA+GGG + chr1.4:67929544-67929563 MS.gene21132:intron 25.0%
AGAGATAAATAACTGGAAGA+AGG + chr1.4:67929823-67929842 MS.gene21132:CDS 30.0%
AGATGTCAGAGATAAATAAC+TGG + chr1.4:67929816-67929835 MS.gene21132:CDS 30.0%
CAAACCAAATATCCGTATAA+GGG - chr1.4:67929902-67929921 None:intergenic 30.0%
CAGATACCAGAAGTTAAATT+TGG + chr1.4:67929297-67929316 MS.gene21132:CDS 30.0%
CTACTTCAACTTTGATTGAT+AGG + chr1.4:67929418-67929437 MS.gene21132:CDS 30.0%
TATGTTGAAAAACATGGAAC+CGG + chr1.4:67928751-67928770 MS.gene21132:CDS 30.0%
TCAAACCAAATATCCGTATA+AGG - chr1.4:67929903-67929922 None:intergenic 30.0%
! ACATAATGAATCCGGAATTT+TGG + chr1.4:67929648-67929667 MS.gene21132:CDS 30.0%
! CATCGTTGGTTACTAATAAA+AGG + chr1.4:67928677-67928696 MS.gene21132:CDS 30.0%
!! CAATTACTTTCATCGATTTC+AGG + chr1.4:67929543-67929562 MS.gene21132:intron 30.0%
!! TTCTTTTTGTTATAGATGCC+TGG + chr1.4:67929120-67929139 MS.gene21132:intron 30.0%
AAAAACATGGAACCGGAAAT+TGG + chr1.4:67928758-67928777 MS.gene21132:CDS 35.0%
ACATGACGACATAATGAATC+CGG + chr1.4:67929640-67929659 MS.gene21132:CDS 35.0%
GATGGTTTGAAGAGTAGTAA+TGG + chr1.4:67929240-67929259 MS.gene21132:CDS 35.0%
GATTCATTATGTCGTCATGT+AGG - chr1.4:67929640-67929659 None:intergenic 35.0%
GGTTGAAGAAAGGAACATTA+TGG + chr1.4:67928698-67928717 MS.gene21132:CDS 35.0%
! CTTTGGAGAACGATGAAAAA+GGG + chr1.4:67929582-67929601 MS.gene21132:CDS 35.0%
AACGCGTCATTCCAAAATTC+CGG - chr1.4:67929662-67929681 None:intergenic 40.0%
AATATGGCTGCAGTTGTAGA+AGG - chr1.4:67929010-67929029 None:intergenic 40.0%
ATCTGATGTTGAGTCTCCAT+AGG - chr1.4:67929800-67929819 None:intergenic 40.0%
CATTGTCATGCAAGTGTCTA+AGG - chr1.4:67929750-67929769 None:intergenic 40.0%
CTACGACCTGATGTAAAGAA+GGG + chr1.4:67928850-67928869 MS.gene21132:CDS 40.0%
GGAACCCTTATACGGATATT+TGG + chr1.4:67929895-67929914 MS.gene21132:CDS 40.0%
GTTCAGCACATTAGTCAATG+AGG + chr1.4:67929679-67929698 MS.gene21132:CDS 40.0%
TCTACGACCTGATGTAAAGA+AGG + chr1.4:67928849-67928868 MS.gene21132:CDS 40.0%
TGAAAAAGGGAAGAAGCCTT+TGG + chr1.4:67929595-67929614 MS.gene21132:CDS 40.0%
TGAGTTCAGATGGTCTAAGA+TGG + chr1.4:67928927-67928946 MS.gene21132:CDS 40.0%
TGATACCTCCTTCCAATTTC+CGG - chr1.4:67928773-67928792 None:intergenic 40.0%
TGGTTTGAGGAACCCTTATA+CGG + chr1.4:67929887-67929906 MS.gene21132:CDS 40.0%
TTGATGAAAGCCAGGTCATT+TGG + chr1.4:67929867-67929886 MS.gene21132:CDS 40.0%
! CCTTTGGAGAACGATGAAAA+AGG + chr1.4:67929581-67929600 MS.gene21132:CDS 40.0%
! CTAAGTTTGGTGAGTTCAGA+TGG + chr1.4:67928917-67928936 MS.gene21132:CDS 40.0%
!! AAGGAGGTATCAAAGAACAC+GGG + chr1.4:67928781-67928800 MS.gene21132:CDS 40.0%
!! ATGTCATTATCGGTTCTTCC+AGG - chr1.4:67929141-67929160 None:intergenic 40.0%
!! CCTTTTTCATCGTTCTCCAA+AGG - chr1.4:67929584-67929603 None:intergenic 40.0%
!! GAAGGAGGTATCAAAGAACA+CGG + chr1.4:67928780-67928799 MS.gene21132:CDS 40.0%
!! TCATCGATTTCAGGGAAGAA+GGG + chr1.4:67929552-67929571 MS.gene21132:intron 40.0%
!! TTCATCGATTTCAGGGAAGA+AGG + chr1.4:67929551-67929570 MS.gene21132:intron 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr1.4:67928818-67928837 MS.gene21132:CDS 40.0%
AACGGACCCTTCTTTACATC+AGG - chr1.4:67928859-67928878 None:intergenic 45.0%
ACATGGAACCGGAAATTGGA+AGG + chr1.4:67928762-67928781 MS.gene21132:CDS 45.0%
AGTTCCATGTTGTCAGGGAA+GGG - chr1.4:67929216-67929235 None:intergenic 45.0%
CAACCAGTTCCATGTTGTCA+GGG - chr1.4:67929221-67929240 None:intergenic 45.0%
CTGGAAGAAGGCAATTGCTT+TGG + chr1.4:67929835-67929854 MS.gene21132:CDS 45.0%
GAAGAAGGCAATTGCTTTGG+AGG + chr1.4:67929838-67929857 MS.gene21132:CDS 45.0%
GACAACATGGAACTGGTTGA+TGG + chr1.4:67929222-67929241 MS.gene21132:CDS 45.0%
GCTTCAACATCGTTCTCCAA+AGG - chr1.4:67929614-67929633 None:intergenic 45.0%
GTTCCTCAAACCAAATGACC+TGG - chr1.4:67929880-67929899 None:intergenic 45.0%
TCAACCAGTTCCATGTTGTC+AGG - chr1.4:67929222-67929241 None:intergenic 45.0%
TGATGTTGAGTCTCCATAGG+TGG - chr1.4:67929797-67929816 None:intergenic 45.0%
!! AAGCCAGGTCATTTGGTTTG+AGG + chr1.4:67929874-67929893 MS.gene21132:CDS 45.0%
!! AAGGCAATTGCTTTGGAGGA+AGG + chr1.4:67929842-67929861 MS.gene21132:CDS 45.0%
!!! ATTTAACATATAAATTTTTA+CGG - chr1.4:67929520-67929539 None:intergenic 5.0%
CAGTTCCATGTTGTCAGGGA+AGG - chr1.4:67929217-67929236 None:intergenic 50.0%
CTTCCCTGACAACATGGAAC+TGG + chr1.4:67929215-67929234 MS.gene21132:CDS 50.0%
GGAAGAAGGGAAGAAGCCTT+TGG + chr1.4:67929565-67929584 MS.gene21132:CDS 50.0%
GTTGAGTCTCCATAGGTGGT+GGG - chr1.4:67929793-67929812 None:intergenic 50.0%
TGGAACCGGAAATTGGAAGG+AGG + chr1.4:67928765-67928784 MS.gene21132:CDS 50.0%
TGTTGAGTCTCCATAGGTGG+TGG - chr1.4:67929794-67929813 None:intergenic 50.0%
! ATGGTCTAAGATGGCTCTCG+AGG + chr1.4:67928936-67928955 MS.gene21132:CDS 50.0%
!! GGAAGGTGTTGATGAAAGCC+AGG + chr1.4:67929859-67929878 MS.gene21132:CDS 50.0%
AACACGGGACTTGCACACTG+TGG + chr1.4:67928796-67928815 MS.gene21132:CDS 55.0%
GTCACCCTTCCCTGACAACA+TGG + chr1.4:67929209-67929228 MS.gene21132:CDS 55.0%
!! GTCTCCATAGGTGGTGGGAG+TGG - chr1.4:67929788-67929807 None:intergenic 60.0%
!! TCCATAGGTGGTGGGAGTGG+AGG - chr1.4:67929785-67929804 None:intergenic 60.0%
GCCTCCACTCCCACCACCTA+TGG + chr1.4:67929781-67929800 MS.gene21132:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 67928670 67929922 67928670 ID=MS.gene21132
chr1.4 mRNA 67928670 67929922 67928670 ID=MS.gene21132.t1;Parent=MS.gene21132
chr1.4 exon 67928670 67928957 67928670 ID=MS.gene21132.t1.exon1;Parent=MS.gene21132.t1
chr1.4 CDS 67928670 67928957 67928670 ID=cds.MS.gene21132.t1;Parent=MS.gene21132.t1
chr1.4 exon 67929135 67929439 67929135 ID=MS.gene21132.t1.exon2;Parent=MS.gene21132.t1
chr1.4 CDS 67929135 67929439 67929135 ID=cds.MS.gene21132.t1;Parent=MS.gene21132.t1
chr1.4 exon 67929565 67929922 67929565 ID=MS.gene21132.t1.exon3;Parent=MS.gene21132.t1
chr1.4 CDS 67929565 67929922 67929565 ID=cds.MS.gene21132.t1;Parent=MS.gene21132.t1
Gene Sequence

>MS.gene21132

ATGACTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAGAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATTTTCTAAGTTTGGTGAGTTCAGATGGTCTAAGATGGCTCTCGAGGTATATTTTTGTTCATGCTTTACTTCTTTTATTTGAAATATTTATCTGTCCTTCTACAACTGCAGCCATATTCATTAGATCACATGTTGTGCAATTTAATTAAATACAATACTATAATATAATATATTTACCACTTGTGTCATTAATTTTAATTTGTATTCATTCTTTTTGTTATAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATGGAACTGGTTGATGGTTTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTCAGATACCAGAAGTTAAATTTGGAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGTGAGTAGATTATGCAATGCATGCCATTCTCTTTTATATATACATCTATTTGTTACGCCGATATTAATAATAATTTTCCGTAAAAATTTATATGTTAAATTTACAATTACTTTCATCGATTTCAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGGAGAACGATGTTGAAGCAAACCTACATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAGCACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCAGATCTGCCTCCACTCCCACCACCTATGGAGACTCAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGAGGAAGGTGTTGATGAAAGCCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MS.gene21132.t1

MTSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELFSKFGEFRWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNMELVDGLKSSNGKRIRNSQENKFQIPEVKFGNQILHTNLSDLPNKQFSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLENDVEANLHDDIMNPEFWNDAFSTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHQMSEINNWKKAIALEEGVDESQVIWFEEPLYGYLV