Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21488.t1 | XP_024640323.1 | 96.5 | 543 | 19 | 0 | 1 | 543 | 1 | 543 | 1.50E-296 | 1028.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21488.t1 | Q6LA43 | 45.9 | 579 | 204 | 18 | 1 | 531 | 1 | 518 | 4.5e-108 | 393.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21488.t1 | G7JZU4 | 96.5 | 543 | 19 | 0 | 1 | 543 | 1 | 543 | 1.1e-296 | 1028.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene21488.t1 | TF | GARP-ARR-B |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21488.t1 | MTR_5g014040 | 96.501 | 543 | 19 | 0 | 1 | 543 | 1 | 543 | 0.0 | 1093 |
MS.gene21488.t1 | MTR_5g014040 | 95.620 | 548 | 19 | 1 | 1 | 543 | 1 | 548 | 0.0 | 1087 |
MS.gene21488.t1 | MTR_5g014040 | 94.862 | 506 | 21 | 1 | 43 | 543 | 3 | 508 | 0.0 | 995 |
MS.gene21488.t1 | MTR_4g098870 | 69.581 | 549 | 142 | 8 | 1 | 531 | 21 | 562 | 0.0 | 735 |
MS.gene21488.t1 | MTR_4g098870 | 69.581 | 549 | 142 | 8 | 1 | 531 | 1 | 542 | 0.0 | 734 |
MS.gene21488.t1 | MTR_4g098870 | 69.581 | 549 | 142 | 8 | 1 | 531 | 40 | 581 | 0.0 | 734 |
MS.gene21488.t1 | MTR_4g098870 | 69.758 | 496 | 136 | 7 | 1 | 489 | 21 | 509 | 0.0 | 673 |
MS.gene21488.t1 | MTR_4g098870 | 69.758 | 496 | 136 | 7 | 1 | 489 | 1 | 489 | 0.0 | 672 |
MS.gene21488.t1 | MTR_2g090675 | 34.701 | 268 | 130 | 8 | 305 | 532 | 155 | 417 | 8.21e-40 | 150 |
MS.gene21488.t1 | MTR_4g078810 | 34.351 | 262 | 133 | 5 | 308 | 531 | 155 | 415 | 1.70e-36 | 140 |
MS.gene21488.t1 | MTR_4g121020 | 63.333 | 60 | 22 | 0 | 310 | 369 | 110 | 169 | 5.28e-18 | 87.8 |
MS.gene21488.t1 | MTR_4g131600 | 29.187 | 209 | 121 | 5 | 264 | 471 | 154 | 336 | 6.22e-18 | 87.4 |
MS.gene21488.t1 | MTR_4g131600 | 39.200 | 125 | 70 | 3 | 14 | 134 | 20 | 142 | 1.89e-15 | 79.7 |
MS.gene21488.t1 | MTR_4g121020 | 63.333 | 60 | 22 | 0 | 310 | 369 | 214 | 273 | 6.61e-18 | 87.8 |
MS.gene21488.t1 | MTR_4g121020 | 36.364 | 132 | 80 | 2 | 9 | 137 | 26 | 156 | 8.85e-15 | 77.8 |
MS.gene21488.t1 | MTR_4g121020 | 63.333 | 60 | 22 | 0 | 310 | 369 | 214 | 273 | 6.68e-18 | 87.8 |
MS.gene21488.t1 | MTR_4g121020 | 36.364 | 132 | 80 | 2 | 9 | 137 | 26 | 156 | 8.78e-15 | 77.8 |
MS.gene21488.t1 | MTR_3g106220 | 54.545 | 66 | 30 | 0 | 304 | 369 | 191 | 256 | 4.87e-17 | 84.7 |
MS.gene21488.t1 | MTR_3g106220 | 37.097 | 124 | 74 | 2 | 14 | 134 | 8 | 130 | 1.46e-13 | 73.9 |
MS.gene21488.t1 | MTR_7g089010 | 58.333 | 60 | 25 | 0 | 310 | 369 | 90 | 149 | 7.44e-17 | 81.6 |
MS.gene21488.t1 | MTR_2g450070 | 32.778 | 180 | 94 | 6 | 307 | 480 | 209 | 367 | 1.21e-16 | 83.6 |
MS.gene21488.t1 | MTR_2g450070 | 38.095 | 126 | 70 | 5 | 14 | 134 | 18 | 140 | 2.53e-13 | 73.2 |
MS.gene21488.t1 | MTR_2g450070 | 32.778 | 180 | 94 | 6 | 307 | 480 | 209 | 367 | 1.27e-16 | 83.6 |
MS.gene21488.t1 | MTR_2g450070 | 38.095 | 126 | 70 | 5 | 14 | 134 | 18 | 140 | 2.68e-13 | 73.2 |
MS.gene21488.t1 | MTR_1g032570 | 58.333 | 60 | 25 | 0 | 310 | 369 | 130 | 189 | 1.39e-16 | 83.2 |
MS.gene21488.t1 | MTR_1g032570 | 58.333 | 60 | 25 | 0 | 310 | 369 | 199 | 258 | 1.86e-16 | 83.2 |
MS.gene21488.t1 | MTR_1g032570 | 37.313 | 134 | 78 | 3 | 8 | 137 | 5 | 136 | 2.03e-16 | 82.8 |
MS.gene21488.t1 | MTR_1g013170 | 57.377 | 61 | 26 | 0 | 309 | 369 | 189 | 249 | 7.24e-16 | 80.9 |
MS.gene21488.t1 | MTR_1g013170 | 34.677 | 124 | 77 | 2 | 14 | 134 | 5 | 127 | 1.40e-11 | 67.4 |
MS.gene21488.t1 | MTR_4g064730 | 55.000 | 60 | 27 | 0 | 310 | 369 | 130 | 189 | 9.81e-16 | 78.6 |
MS.gene21488.t1 | MTR_2g034960 | 55.000 | 60 | 27 | 0 | 310 | 369 | 210 | 269 | 1.59e-15 | 80.1 |
MS.gene21488.t1 | MTR_2g034960 | 36.719 | 128 | 77 | 2 | 14 | 138 | 29 | 155 | 5.69e-14 | 75.1 |
MS.gene21488.t1 | MTR_4g131570 | 37.405 | 131 | 78 | 2 | 12 | 139 | 15 | 144 | 1.74e-15 | 79.7 |
MS.gene21488.t1 | MTR_4g131570 | 32.961 | 179 | 97 | 9 | 306 | 464 | 198 | 373 | 4.69e-15 | 78.6 |
MS.gene21488.t1 | MTR_4g131580 | 38.710 | 124 | 72 | 2 | 14 | 134 | 17 | 139 | 1.77e-15 | 79.7 |
MS.gene21488.t1 | MTR_4g131580 | 36.170 | 141 | 59 | 5 | 307 | 419 | 196 | 333 | 1.04e-14 | 77.4 |
MS.gene21488.t1 | MTR_7g117705 | 57.377 | 61 | 26 | 0 | 309 | 369 | 189 | 249 | 7.71e-15 | 77.4 |
MS.gene21488.t1 | MTR_3g086100 | 30.332 | 211 | 133 | 6 | 12 | 218 | 11 | 211 | 8.56e-15 | 77.8 |
MS.gene21488.t1 | MTR_3g086100 | 35.833 | 120 | 70 | 2 | 262 | 376 | 147 | 264 | 1.47e-13 | 73.6 |
MS.gene21488.t1 | MTR_3g102600 | 34.615 | 156 | 94 | 3 | 14 | 166 | 8 | 158 | 1.12e-14 | 73.9 |
MS.gene21488.t1 | MTR_3g102600 | 36.364 | 77 | 49 | 0 | 293 | 369 | 114 | 190 | 2.86e-13 | 69.7 |
MS.gene21488.t1 | MTR_3g102600 | 36.306 | 157 | 90 | 5 | 14 | 166 | 8 | 158 | 1.35e-14 | 72.8 |
MS.gene21488.t1 | MTR_3g102600 | 35.714 | 70 | 45 | 0 | 293 | 362 | 114 | 183 | 3.08e-11 | 63.2 |
MS.gene21488.t1 | MTR_4g086835 | 48.529 | 68 | 35 | 0 | 302 | 369 | 265 | 332 | 2.28e-14 | 75.5 |
MS.gene21488.t1 | MTR_3g102590 | 33.065 | 124 | 80 | 1 | 14 | 134 | 8 | 131 | 3.38e-14 | 71.6 |
MS.gene21488.t1 | MTR_3g102590 | 52.632 | 57 | 27 | 0 | 304 | 360 | 136 | 192 | 1.33e-11 | 64.3 |
MS.gene21488.t1 | MTR_3g102590 | 54.098 | 61 | 28 | 0 | 304 | 364 | 136 | 196 | 3.79e-14 | 72.8 |
MS.gene21488.t1 | MTR_3g102590 | 33.065 | 124 | 80 | 1 | 14 | 134 | 8 | 131 | 4.84e-14 | 72.4 |
MS.gene21488.t1 | MTR_1g013180 | 44.737 | 76 | 36 | 1 | 309 | 378 | 340 | 415 | 4.12e-14 | 75.9 |
MS.gene21488.t1 | MTR_1g013180 | 35.200 | 125 | 75 | 3 | 14 | 134 | 156 | 278 | 3.36e-11 | 66.2 |
MS.gene21488.t1 | MTR_3g102600 | 45.000 | 60 | 33 | 0 | 310 | 369 | 82 | 141 | 4.41e-14 | 70.9 |
MS.gene21488.t1 | MTR_8g079940 | 60.714 | 56 | 22 | 0 | 310 | 365 | 208 | 263 | 7.81e-14 | 74.3 |
MS.gene21488.t1 | MTR_8g079940 | 36.000 | 125 | 74 | 3 | 14 | 134 | 25 | 147 | 2.63e-13 | 72.8 |
MS.gene21488.t1 | MTR_3g086100 | 41.758 | 91 | 48 | 1 | 291 | 376 | 103 | 193 | 9.19e-14 | 74.3 |
MS.gene21488.t1 | MTR_7g026400 | 53.333 | 60 | 28 | 0 | 310 | 369 | 156 | 215 | 1.31e-13 | 73.9 |
MS.gene21488.t1 | MTR_1g093080 | 46.429 | 84 | 41 | 2 | 286 | 368 | 189 | 269 | 2.67e-13 | 72.0 |
MS.gene21488.t1 | MTR_5g054300 | 48.000 | 75 | 35 | 3 | 304 | 375 | 192 | 265 | 6.69e-13 | 70.5 |
MS.gene21488.t1 | MTR_4g086835 | 47.826 | 69 | 35 | 1 | 302 | 369 | 265 | 333 | 7.25e-13 | 70.9 |
MS.gene21488.t1 | MTR_4g021790 | 44.928 | 69 | 38 | 0 | 300 | 368 | 157 | 225 | 1.24e-12 | 68.9 |
MS.gene21488.t1 | MTR_6g045327 | 35.385 | 130 | 79 | 3 | 12 | 137 | 12 | 140 | 1.35e-12 | 70.1 |
MS.gene21488.t1 | MTR_3g092780 | 30.070 | 143 | 91 | 4 | 8 | 142 | 44 | 185 | 1.90e-12 | 70.5 |
MS.gene21488.t1 | MTR_4g021760 | 33.333 | 93 | 62 | 0 | 300 | 392 | 158 | 250 | 2.00e-12 | 68.6 |
MS.gene21488.t1 | MTR_3g092780 | 30.070 | 143 | 91 | 4 | 8 | 142 | 44 | 185 | 2.07e-12 | 70.1 |
MS.gene21488.t1 | MTR_4g113140 | 52.308 | 65 | 29 | 2 | 305 | 368 | 230 | 293 | 2.08e-12 | 69.7 |
MS.gene21488.t1 | MTR_3g092780 | 29.167 | 144 | 93 | 4 | 8 | 143 | 44 | 186 | 3.28e-12 | 69.7 |
MS.gene21488.t1 | MTR_4g108880 | 29.134 | 127 | 84 | 3 | 10 | 131 | 26 | 151 | 3.67e-12 | 69.3 |
MS.gene21488.t1 | MTR_3g102600 | 45.283 | 53 | 29 | 0 | 310 | 362 | 82 | 134 | 3.68e-12 | 64.3 |
MS.gene21488.t1 | MTR_3g092780 | 29.167 | 144 | 93 | 4 | 8 | 143 | 44 | 186 | 3.77e-12 | 69.3 |
MS.gene21488.t1 | MTR_5g017980 | 50.000 | 60 | 30 | 0 | 310 | 369 | 191 | 250 | 5.18e-12 | 67.4 |
MS.gene21488.t1 | MTR_5g017980 | 50.000 | 60 | 30 | 0 | 310 | 369 | 192 | 251 | 5.22e-12 | 67.4 |
MS.gene21488.t1 | MTR_1g053830 | 52.727 | 55 | 25 | 1 | 313 | 366 | 20 | 74 | 9.74e-12 | 62.0 |
MS.gene21488.t1 | MTR_7g118260 | 30.405 | 148 | 88 | 4 | 15 | 155 | 11 | 150 | 1.30e-11 | 67.4 |
MS.gene21488.t1 | MTR_0450s0040 | 46.667 | 60 | 32 | 0 | 310 | 369 | 168 | 227 | 1.42e-11 | 66.6 |
MS.gene21488.t1 | MTR_7g118260 | 32.258 | 124 | 75 | 3 | 15 | 131 | 11 | 132 | 1.64e-11 | 67.4 |
MS.gene21488.t1 | MTR_4g021855 | 36.364 | 132 | 76 | 4 | 254 | 380 | 113 | 241 | 1.75e-11 | 65.9 |
MS.gene21488.t1 | MTR_3g037390 | 29.134 | 127 | 84 | 3 | 10 | 131 | 17 | 142 | 2.60e-11 | 66.6 |
MS.gene21488.t1 | MTR_1g053835 | 44.444 | 81 | 41 | 2 | 287 | 366 | 237 | 314 | 3.00e-11 | 65.9 |
MS.gene21488.t1 | MTR_8g105600 | 57.692 | 52 | 22 | 0 | 314 | 365 | 190 | 241 | 4.57e-11 | 65.9 |
MS.gene21488.t1 | MTR_5g017980 | 49.180 | 61 | 30 | 1 | 310 | 369 | 192 | 252 | 9.68e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21488.t1 | AT4G18020 | 48.763 | 566 | 207 | 18 | 1 | 531 | 1 | 518 | 3.23e-138 | 411 |
MS.gene21488.t1 | AT4G18020 | 48.763 | 566 | 207 | 18 | 1 | 531 | 1 | 518 | 3.23e-138 | 411 |
MS.gene21488.t1 | AT4G18020 | 48.763 | 566 | 207 | 18 | 1 | 531 | 1 | 518 | 3.23e-138 | 411 |
MS.gene21488.t1 | AT4G18020 | 48.763 | 566 | 207 | 18 | 1 | 531 | 1 | 518 | 3.23e-138 | 411 |
MS.gene21488.t1 | AT4G18020 | 48.763 | 566 | 207 | 18 | 1 | 531 | 1 | 518 | 3.23e-138 | 411 |
MS.gene21488.t1 | AT4G18020 | 48.317 | 505 | 186 | 17 | 1 | 478 | 1 | 457 | 8.28e-131 | 390 |
MS.gene21488.t1 | AT4G18020 | 48.317 | 505 | 186 | 17 | 1 | 478 | 1 | 457 | 8.28e-131 | 390 |
MS.gene21488.t1 | AT4G18020 | 48.317 | 505 | 186 | 17 | 1 | 478 | 1 | 457 | 8.28e-131 | 390 |
MS.gene21488.t1 | AT4G18020 | 48.317 | 505 | 186 | 17 | 1 | 478 | 1 | 457 | 8.28e-131 | 390 |
MS.gene21488.t1 | AT4G18020 | 48.317 | 505 | 186 | 17 | 1 | 478 | 1 | 457 | 8.28e-131 | 390 |
MS.gene21488.t1 | AT4G18020 | 48.317 | 505 | 186 | 17 | 1 | 478 | 1 | 457 | 8.28e-131 | 390 |
MS.gene21488.t1 | AT5G44190 | 38.400 | 250 | 112 | 9 | 309 | 531 | 145 | 379 | 1.18e-25 | 109 |
MS.gene21488.t1 | AT2G20570 | 55.952 | 84 | 36 | 1 | 300 | 382 | 142 | 225 | 2.18e-23 | 103 |
MS.gene21488.t1 | AT5G44190 | 44.961 | 129 | 57 | 4 | 309 | 423 | 145 | 273 | 4.68e-23 | 101 |
MS.gene21488.t1 | AT2G20570 | 61.111 | 72 | 27 | 1 | 312 | 382 | 170 | 241 | 2.02e-21 | 97.4 |
MS.gene21488.t1 | AT5G58080 | 49.351 | 77 | 39 | 0 | 304 | 380 | 187 | 263 | 1.81e-18 | 89.4 |
MS.gene21488.t1 | AT5G58080 | 33.333 | 132 | 85 | 2 | 14 | 143 | 14 | 144 | 3.85e-12 | 69.3 |
MS.gene21488.t1 | AT3G16857 | 55.714 | 70 | 31 | 0 | 300 | 369 | 156 | 225 | 3.39e-18 | 88.6 |
MS.gene21488.t1 | AT3G16857 | 55.714 | 70 | 31 | 0 | 300 | 369 | 226 | 295 | 4.79e-18 | 88.2 |
MS.gene21488.t1 | AT3G16857 | 37.097 | 124 | 74 | 2 | 14 | 134 | 33 | 155 | 5.61e-15 | 78.6 |
MS.gene21488.t1 | AT3G16857 | 55.714 | 70 | 31 | 0 | 300 | 369 | 226 | 295 | 4.81e-18 | 88.2 |
MS.gene21488.t1 | AT3G16857 | 37.097 | 124 | 74 | 2 | 14 | 134 | 33 | 155 | 6.00e-15 | 78.6 |
MS.gene21488.t1 | AT2G01760 | 58.730 | 63 | 26 | 0 | 307 | 369 | 131 | 193 | 1.20e-17 | 84.3 |
MS.gene21488.t1 | AT3G10760 | 58.333 | 60 | 25 | 0 | 310 | 369 | 104 | 163 | 1.63e-17 | 84.3 |
MS.gene21488.t1 | AT5G59570 | 54.412 | 68 | 29 | 1 | 310 | 375 | 140 | 207 | 1.98e-17 | 83.6 |
MS.gene21488.t1 | AT5G59570 | 54.412 | 68 | 29 | 1 | 310 | 375 | 140 | 207 | 1.98e-17 | 83.6 |
MS.gene21488.t1 | AT5G05090 | 58.333 | 60 | 25 | 0 | 310 | 369 | 80 | 139 | 2.34e-17 | 82.8 |
MS.gene21488.t1 | AT2G01760 | 58.730 | 63 | 26 | 0 | 307 | 369 | 196 | 258 | 2.84e-17 | 84.3 |
MS.gene21488.t1 | AT2G01760 | 31.200 | 125 | 81 | 2 | 14 | 134 | 7 | 130 | 1.03e-11 | 67.4 |
MS.gene21488.t1 | AT2G01760 | 58.730 | 63 | 26 | 0 | 307 | 369 | 224 | 286 | 3.82e-17 | 84.3 |
MS.gene21488.t1 | AT2G40970 | 58.333 | 60 | 25 | 0 | 310 | 369 | 104 | 163 | 8.61e-17 | 80.5 |
MS.gene21488.t1 | AT4G31920 | 36.620 | 142 | 76 | 5 | 309 | 442 | 181 | 316 | 2.48e-16 | 82.4 |
MS.gene21488.t1 | AT4G31920 | 36.885 | 122 | 73 | 2 | 14 | 132 | 13 | 133 | 1.27e-13 | 73.9 |
MS.gene21488.t1 | AT2G25180 | 59.016 | 61 | 25 | 0 | 309 | 369 | 193 | 253 | 3.91e-16 | 82.0 |
MS.gene21488.t1 | AT2G25180 | 34.328 | 134 | 84 | 2 | 7 | 137 | 6 | 138 | 2.14e-14 | 76.6 |
MS.gene21488.t1 | AT3G46640 | 55.000 | 60 | 27 | 0 | 310 | 369 | 143 | 202 | 3.99e-16 | 80.1 |
MS.gene21488.t1 | AT3G46640 | 55.000 | 60 | 27 | 0 | 310 | 369 | 143 | 202 | 3.99e-16 | 80.1 |
MS.gene21488.t1 | AT3G46640 | 55.000 | 60 | 27 | 0 | 310 | 369 | 143 | 202 | 6.40e-16 | 79.3 |
MS.gene21488.t1 | AT5G07210 | 42.222 | 90 | 51 | 1 | 310 | 398 | 221 | 310 | 5.37e-15 | 78.6 |
MS.gene21488.t1 | AT5G07210 | 42.222 | 90 | 51 | 1 | 310 | 398 | 229 | 318 | 5.73e-15 | 78.2 |
MS.gene21488.t1 | AT2G27070 | 40.000 | 90 | 53 | 1 | 310 | 398 | 224 | 313 | 8.69e-15 | 77.8 |
MS.gene21488.t1 | AT5G24470 | 32.576 | 132 | 80 | 4 | 8 | 131 | 38 | 168 | 9.89e-14 | 74.3 |
MS.gene21488.t1 | AT2G03500 | 52.308 | 65 | 29 | 2 | 305 | 368 | 228 | 291 | 6.41e-13 | 71.2 |
MS.gene21488.t1 | AT1G25550 | 36.207 | 116 | 56 | 6 | 307 | 414 | 206 | 311 | 2.07e-12 | 68.9 |
MS.gene21488.t1 | AT4G37180 | 55.738 | 61 | 26 | 1 | 309 | 368 | 208 | 268 | 3.98e-12 | 68.2 |
MS.gene21488.t1 | AT4G37180 | 55.738 | 61 | 26 | 1 | 309 | 368 | 215 | 275 | 4.97e-12 | 68.2 |
MS.gene21488.t1 | AT1G67710 | 34.400 | 125 | 78 | 2 | 15 | 136 | 8 | 131 | 4.98e-12 | 68.9 |
MS.gene21488.t1 | AT1G67710 | 55.172 | 58 | 25 | 1 | 313 | 369 | 195 | 252 | 9.03e-11 | 64.7 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 5.91e-12 | 68.6 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 5.91e-12 | 68.6 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 5.91e-12 | 68.6 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 5.94e-12 | 68.6 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 6.05e-12 | 68.2 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 6.05e-12 | 68.2 |
MS.gene21488.t1 | AT5G60100 | 31.405 | 121 | 78 | 3 | 16 | 131 | 62 | 182 | 6.05e-12 | 68.2 |
MS.gene21488.t1 | AT5G49240 | 48.387 | 62 | 32 | 0 | 310 | 371 | 222 | 283 | 6.83e-12 | 67.0 |
MS.gene21488.t1 | AT1G13300 | 50.000 | 60 | 29 | 1 | 310 | 368 | 180 | 239 | 9.39e-12 | 67.0 |
MS.gene21488.t1 | AT5G61380 | 27.612 | 134 | 89 | 4 | 3 | 131 | 7 | 137 | 1.59e-11 | 67.4 |
MS.gene21488.t1 | AT2G01060 | 49.206 | 63 | 31 | 1 | 305 | 366 | 9 | 71 | 4.23e-11 | 64.3 |
MS.gene21488.t1 | AT1G67710 | 55.172 | 58 | 25 | 1 | 313 | 369 | 121 | 178 | 6.09e-11 | 65.1 |
MS.gene21488.t1 | AT1G67710 | 55.172 | 58 | 25 | 1 | 313 | 369 | 130 | 187 | 7.25e-11 | 65.1 |
MS.gene21488.t1 | AT3G62670 | 45.455 | 88 | 40 | 3 | 301 | 380 | 201 | 288 | 7.38e-11 | 64.7 |
MS.gene21488.t1 | AT5G06800 | 45.000 | 80 | 30 | 3 | 288 | 366 | 182 | 248 | 8.55e-11 | 63.5 |
Find 139 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTGCTCTTCTTGCTAAA+AGG | 0.234968 | 5.3:-7178840 | None:intergenic |
AGCCATTCCTTCTCGTATAT+TGG | 0.261203 | 5.3:+7172199 | MS.gene21488:CDS |
AAGATTACCCCTGGCGGATA+TGG | 0.263394 | 5.3:-7172647 | None:intergenic |
AGAAGAACCCTAAGTCCTTT+TGG | 0.287836 | 5.3:-7169145 | None:intergenic |
AAGAACAAAGCTTGAATCTA+TGG | 0.296938 | 5.3:+7169201 | MS.gene21488:CDS |
TTGTATGCAAAGACCGATTA+TGG | 0.298780 | 5.3:+7172475 | MS.gene21488:CDS |
CTTGAATCTATGGACTATAA+TGG | 0.346894 | 5.3:+7169211 | MS.gene21488:CDS |
TGCTGACTTACTTGAGTGTA+AGG | 0.351117 | 5.3:-7177923 | None:intergenic |
ACACGGACGAAGATCGAAAA+TGG | 0.354454 | 5.3:+7172420 | MS.gene21488:CDS |
TGCATAGGATCTCTTCGATT+TGG | 0.358006 | 5.3:-7172443 | None:intergenic |
ACCTACGAAACCTCTGATTA+AGG | 0.360688 | 5.3:+7171522 | MS.gene21488:CDS |
CATGTAGTGCGTTGTCTGTT+TGG | 0.369087 | 5.3:-7171246 | None:intergenic |
GTCCTCCGGGTTATCCTCTA+TGG | 0.370689 | 5.3:+7172597 | MS.gene21488:CDS |
AAACAGCTGGTGTACCGATT+TGG | 0.372797 | 5.3:+7172573 | MS.gene21488:CDS |
AAGATTTCCCAAAAGGACTT+AGG | 0.377585 | 5.3:+7169137 | MS.gene21488:CDS |
TTTCCATCCTTGTAAATCAT+TGG | 0.382036 | 5.3:-7169116 | None:intergenic |
TAATGTGGCAAGCCATCTTC+AGG | 0.386166 | 5.3:+7172253 | MS.gene21488:CDS |
TATGGCAACATGGAAGCATT+TGG | 0.394078 | 5.3:-7169963 | None:intergenic |
CAGAATTGTTGTCTCCTTCA+AGG | 0.400600 | 5.3:-7169168 | None:intergenic |
AACGGTTCCAAGGGTGAGAA+TGG | 0.408917 | 5.3:+7171562 | MS.gene21488:CDS |
GAAGGAGGTTTGAGGCCTAT+AGG | 0.414096 | 5.3:-7178777 | None:intergenic |
CTTAGGGTTCTTCTCCTTGA+AGG | 0.421200 | 5.3:+7169154 | MS.gene21488:CDS |
AGCTCCTGCATATCCTATGT+GGG | 0.434588 | 5.3:+7172535 | MS.gene21488:CDS |
GTTGTGTACTTACTAATAGT+TGG | 0.439441 | 5.3:-7170492 | None:intergenic |
ATCAGAGGTTTCGTAGGTTG+AGG | 0.442825 | 5.3:-7171517 | None:intergenic |
ATGGCAACATGGAAGCATTT+GGG | 0.445028 | 5.3:-7169962 | None:intergenic |
GACTCTACAGATTCTTTGAC+CGG | 0.446068 | 5.3:-7171211 | None:intergenic |
AAAACAAGGGGCAAGGTTAG+TGG | 0.446707 | 5.3:+7171375 | MS.gene21488:CDS |
ATCAAACTGCAGAATATGGC+TGG | 0.446826 | 5.3:+7178271 | MS.gene21488:intron |
AGATTTCCCAAAAGGACTTA+GGG | 0.447765 | 5.3:+7169138 | MS.gene21488:CDS |
CCATGGCTACCTTTACCTAT+AGG | 0.454703 | 5.3:+7178762 | MS.gene21488:CDS |
AGAAATTTGAAACCTCCATC+AGG | 0.457896 | 5.3:-7170450 | None:intergenic |
ACGGTTCCAAGGGTGAGAAT+GGG | 0.464644 | 5.3:+7171563 | MS.gene21488:CDS |
TTCAGGTGCATGTGGATGCA+TGG | 0.466852 | 5.3:+7177861 | MS.gene21488:intron |
TGTACCGATTTGGAGTCCTC+CGG | 0.467682 | 5.3:+7172583 | MS.gene21488:CDS |
CAGCTCCTGCATATCCTATG+TGG | 0.469307 | 5.3:+7172534 | MS.gene21488:CDS |
TTTGAGGTGGAGGCAACATT+GGG | 0.470593 | 5.3:-7177889 | None:intergenic |
CGATTAGCTTTATTCTCACA+TGG | 0.470968 | 5.3:-7171670 | None:intergenic |
TAAGGGATACAGTGAGTTTG+AGG | 0.473363 | 5.3:-7177905 | None:intergenic |
ACAAAATAATTACCTGAAGA+TGG | 0.478335 | 5.3:-7172265 | None:intergenic |
AGGCCTCAAACCTCCTTCAA+TGG | 0.480176 | 5.3:+7178782 | MS.gene21488:CDS |
CATGTGAGAATAAAGCTAAT+CGG | 0.480529 | 5.3:+7171671 | MS.gene21488:CDS |
AAAGTTCATTACCTCCACTA+TGG | 0.481628 | 5.3:-7169981 | None:intergenic |
AGCAGTGGATTATAGTTATC+CGG | 0.482719 | 5.3:+7178309 | MS.gene21488:CDS |
TCAGGTGCATGTGGATGCAT+GGG | 0.484304 | 5.3:+7177862 | MS.gene21488:intron |
CACATAGGATATGCAGGAGC+TGG | 0.488577 | 5.3:-7172533 | None:intergenic |
TTCAGCTTGTCCTCAGAAAG+TGG | 0.491885 | 5.3:-7171036 | None:intergenic |
TATGGTGGATAGGCCATAAT+CGG | 0.494071 | 5.3:-7172488 | None:intergenic |
TGAAGCCCCATTCTCACCCT+TGG | 0.498280 | 5.3:-7171569 | None:intergenic |
ATGTTCATTATCACTAAACT+TGG | 0.498521 | 5.3:-7171302 | None:intergenic |
ATTGATGCAGGCAGAGGAAG+TGG | 0.499805 | 5.3:+7178707 | MS.gene21488:intron |
AGTGGTGGACAAGGCTGTAA+AGG | 0.501990 | 5.3:+7178725 | MS.gene21488:CDS |
GGATGGAAAGATTTCCCAAA+AGG | 0.504062 | 5.3:+7169130 | MS.gene21488:CDS |
AATTGAGGAGTCGAAGGAGC+CGG | 0.504982 | 5.3:-7171352 | None:intergenic |
GTTTGAGGTGGAGGCAACAT+TGG | 0.505444 | 5.3:-7177890 | None:intergenic |
TTCAGACAGAGCGCTTGCCT+CGG | 0.507470 | 5.3:-7171179 | None:intergenic |
GGTTTGAGGCCTATAGGTAA+AGG | 0.507845 | 5.3:-7178771 | None:intergenic |
CAGCTGTTTGACTTCCGTGT+TGG | 0.509674 | 5.3:-7172559 | None:intergenic |
TCTGTCTGAATCGCTTAAAC+CGG | 0.513162 | 5.3:+7171192 | MS.gene21488:CDS |
GTGAAGGCAGTGGAACATCT+AGG | 0.515004 | 5.3:+7172167 | MS.gene21488:CDS |
CTCCAATATACGAGAAGGAA+TGG | 0.515998 | 5.3:-7172201 | None:intergenic |
TATCCATTGAAGGAGGTTTG+AGG | 0.516912 | 5.3:-7178785 | None:intergenic |
CATTGGAAGCCATATCCGCC+AGG | 0.517092 | 5.3:+7172638 | MS.gene21488:CDS |
ATGCTTCCATGTTGCCATAG+TGG | 0.519336 | 5.3:+7169967 | MS.gene21488:CDS |
GACGGCAAGCGATAAATATC+CGG | 0.521710 | 5.3:+7171333 | MS.gene21488:CDS |
ATACAGTGAGTTTGAGGTGG+AGG | 0.531317 | 5.3:-7177899 | None:intergenic |
TGCACTGCCAATGATTTACA+AGG | 0.534699 | 5.3:+7169109 | MS.gene21488:CDS |
GTGAGTATAAGCTGCCCTGA+TGG | 0.537521 | 5.3:+7170435 | MS.gene21488:CDS |
CTTTCTGTAGGCTGCCATAG+AGG | 0.540911 | 5.3:-7172611 | None:intergenic |
TAACCCGGAGGACTCCAAAT+CGG | 0.541856 | 5.3:-7172587 | None:intergenic |
TATGGCAGCCTACAGAAAGT+TGG | 0.542411 | 5.3:+7172615 | MS.gene21488:CDS |
CTTCCGTGTTGGCCCCACAT+AGG | 0.543505 | 5.3:-7172548 | None:intergenic |
CTCAATTAAAACAAGGGGCA+AGG | 0.543629 | 5.3:+7171368 | MS.gene21488:CDS |
ATTCTCACCCTTGGAACCGT+TGG | 0.545261 | 5.3:-7171560 | None:intergenic |
TGGCCCCACATAGGATATGC+AGG | 0.545338 | 5.3:-7172539 | None:intergenic |
TCCAACACACTATCCATTGA+AGG | 0.547337 | 5.3:-7178795 | None:intergenic |
GTACCGATTTGGAGTCCTCC+GGG | 0.547442 | 5.3:+7172584 | MS.gene21488:CDS |
GGCAGAGGAAGTGGTGGACA+AGG | 0.548339 | 5.3:+7178716 | MS.gene21488:intron |
AAGGTGTGATTAGAATGATA+TGG | 0.548662 | 5.3:-7172506 | None:intergenic |
GCCTTAATCAGAGGTTTCGT+AGG | 0.552358 | 5.3:-7171523 | None:intergenic |
TTCCAATGCCAACTTTCTGT+AGG | 0.557441 | 5.3:-7172623 | None:intergenic |
ATACAATAGTTCCTTTGCAT+AGG | 0.572699 | 5.3:-7172458 | None:intergenic |
GGGATACAGTGAGTTTGAGG+TGG | 0.573814 | 5.3:-7177902 | None:intergenic |
TTGAGCAATTAGTCTGCTCA+TGG | 0.576741 | 5.3:-7171411 | None:intergenic |
TCTTCTTCCGCCTTAATCAG+AGG | 0.577092 | 5.3:-7171532 | None:intergenic |
TCCTTCAATGGATAGTGTGT+TGG | 0.579357 | 5.3:+7178794 | MS.gene21488:CDS |
GGGGCAAGGTTAGTGGATGA+TGG | 0.579359 | 5.3:+7171382 | MS.gene21488:CDS |
CAAATTTCTCGAGAATGCGA+AGG | 0.579566 | 5.3:+7170464 | MS.gene21488:CDS |
AATATCAATAGATTTAGATA+AGG | 0.579803 | 5.3:+7171276 | MS.gene21488:CDS |
AGCCTACAGAAAGTTGGCAT+TGG | 0.580116 | 5.3:+7172621 | MS.gene21488:CDS |
GCTGACTTACTTGAGTGTAA+GGG | 0.580632 | 5.3:-7177922 | None:intergenic |
GTCTGTTTGGAGCTGCAACA+TGG | 0.584513 | 5.3:-7171233 | None:intergenic |
CTGCCAATGATTTACAAGGA+TGG | 0.587055 | 5.3:+7169113 | MS.gene21488:CDS |
TCGACTCCTCAATTAAAACA+AGG | 0.587700 | 5.3:+7171361 | MS.gene21488:CDS |
ATTAACTCCAATATACGAGA+AGG | 0.590177 | 5.3:-7172206 | None:intergenic |
TTGGCAGCATGTTGTTCACA+AGG | 0.591380 | 5.3:+7171065 | MS.gene21488:CDS |
TCAAACTGCAGAATATGGCT+GGG | 0.595527 | 5.3:+7178272 | MS.gene21488:intron |
CGGTTTGACAAGGCATAATG+TGG | 0.597828 | 5.3:+7172238 | MS.gene21488:CDS |
CCTATAGGTAAAGGTAGCCA+TGG | 0.598962 | 5.3:-7178762 | None:intergenic |
CGGTTCCAAGGGTGAGAATG+GGG | 0.600958 | 5.3:+7171564 | MS.gene21488:CDS |
ACTACTTGAGATTGCTGACA+AGG | 0.601057 | 5.3:-7169939 | None:intergenic |
TTGGAGTTAATGAAAGTCGA+CGG | 0.603528 | 5.3:+7172218 | MS.gene21488:CDS |
AGGAGGCAATAAACAAGCCA+TGG | 0.604570 | 5.3:+7178745 | MS.gene21488:CDS |
AAGTTTCTCGGCAACGCTGG+TGG | 0.606145 | 5.3:+7171610 | MS.gene21488:CDS |
AGTATAAGCTGCCCTGATGG+AGG | 0.607969 | 5.3:+7170438 | MS.gene21488:CDS |
ATTAGAATGATATGGTGGAT+AGG | 0.608161 | 5.3:-7172498 | None:intergenic |
ATCGAAGAGATCCTATGCAA+AGG | 0.609454 | 5.3:+7172447 | MS.gene21488:CDS |
ATATGCAGGAGCTGGAGGAA+AGG | 0.610602 | 5.3:-7172525 | None:intergenic |
CCTCACTAAACCACTTTCTG+AGG | 0.611321 | 5.3:+7171026 | MS.gene21488:CDS |
CGACTCCTCAATTAAAACAA+GGG | 0.616068 | 5.3:+7171362 | MS.gene21488:CDS |
ATTGGAAGCCATATCCGCCA+GGG | 0.619064 | 5.3:+7172639 | MS.gene21488:CDS |
GCTCCTGCATATCCTATGTG+GGG | 0.621371 | 5.3:+7172536 | MS.gene21488:CDS |
TTGGATGAACTTTCTAAACA+AGG | 0.621400 | 5.3:+7178813 | MS.gene21488:CDS |
GGCTGCCATAGAGGATAACC+CGG | 0.621410 | 5.3:-7172602 | None:intergenic |
CCTCAGAAAGTGGTTTAGTG+AGG | 0.621536 | 5.3:-7171026 | None:intergenic |
CAACACGGAAGTCAAACAGC+TGG | 0.623780 | 5.3:+7172560 | MS.gene21488:CDS |
GGTGGACAAGGCTGTAAAGG+AGG | 0.624645 | 5.3:+7178728 | MS.gene21488:CDS |
CACAATGATGAAGTGCATTG+CGG | 0.626806 | 5.3:+7170769 | MS.gene21488:CDS |
ATAGGATATGCAGGAGCTGG+AGG | 0.633192 | 5.3:-7172530 | None:intergenic |
TGAAAGTCGACGGTTTGACA+AGG | 0.634861 | 5.3:+7172228 | MS.gene21488:CDS |
TATCCTATGTGGGGCCAACA+CGG | 0.635664 | 5.3:+7172545 | MS.gene21488:CDS |
GAAATTTGAAACCTCCATCA+GGG | 0.638403 | 5.3:-7170449 | None:intergenic |
CAATCAGGCATTCAATGCCG+AGG | 0.641798 | 5.3:+7171162 | MS.gene21488:intron |
TCATGAACAACAAGTCAGCA+TGG | 0.646375 | 5.3:-7178870 | None:intergenic |
GATGCACAACGCTAAAGCAG+TGG | 0.647084 | 5.3:+7178294 | MS.gene21488:CDS |
GACTCCTCAATTAAAACAAG+GGG | 0.647576 | 5.3:+7171363 | MS.gene21488:CDS |
AACACACTATCCATTGAAGG+AGG | 0.656403 | 5.3:-7178792 | None:intergenic |
TAATGAACATGAGAATTCGA+CGG | 0.659183 | 5.3:+7171315 | MS.gene21488:CDS |
GTGTGATTAGAATGATATGG+TGG | 0.660247 | 5.3:-7172503 | None:intergenic |
AAAGAAAGTGGGGAACATGA+CGG | 0.660506 | 5.3:+7171439 | MS.gene21488:CDS |
GATGCAGGCAGAGGAAGTGG+TGG | 0.661975 | 5.3:+7178710 | MS.gene21488:intron |
CTTCCATGTTGCCATAGTGG+AGG | 0.668416 | 5.3:+7169970 | MS.gene21488:CDS |
TTACCTCCACTATGGCAACA+TGG | 0.672571 | 5.3:-7169973 | None:intergenic |
TACGAAACCTCTGATTAAGG+CGG | 0.686443 | 5.3:+7171525 | MS.gene21488:CDS |
CAGGTGCATGTGGATGCATG+GGG | 0.691891 | 5.3:+7177863 | MS.gene21488:intron |
CAAGAGACAGATCATCCACA+CGG | 0.695941 | 5.3:+7172403 | MS.gene21488:CDS |
TTGGAAGCCATATCCGCCAG+GGG | 0.704021 | 5.3:+7172640 | MS.gene21488:CDS |
TGCCATAGAGGATAACCCGG+AGG | 0.746099 | 5.3:-7172599 | None:intergenic |
GAAAGTGGGGAACATGACGG+TGG | 0.761593 | 5.3:+7171442 | MS.gene21488:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 7169103 | 7178878 | 7169103 | ID=MS.gene21488 |
chr5.3 | mRNA | 7169103 | 7178878 | 7169103 | ID=MS.gene21488.t1;Parent=MS.gene21488 |
chr5.3 | exon | 7169103 | 7169232 | 7169103 | ID=MS.gene21488.t1.exon1;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7169103 | 7169232 | 7169103 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7169912 | 7169991 | 7169912 | ID=MS.gene21488.t1.exon2;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7169912 | 7169991 | 7169912 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7170435 | 7170501 | 7170435 | ID=MS.gene21488.t1.exon3;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7170435 | 7170501 | 7170435 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7170744 | 7170790 | 7170744 | ID=MS.gene21488.t1.exon4;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7170744 | 7170790 | 7170744 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7171009 | 7171086 | 7171009 | ID=MS.gene21488.t1.exon5;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7171009 | 7171086 | 7171009 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7171169 | 7171705 | 7171169 | ID=MS.gene21488.t1.exon6;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7171169 | 7171705 | 7171169 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7172134 | 7172274 | 7172134 | ID=MS.gene21488.t1.exon7;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7172134 | 7172274 | 7172134 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7172389 | 7172661 | 7172389 | ID=MS.gene21488.t1.exon8;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7172389 | 7172661 | 7172389 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7177866 | 7177934 | 7177866 | ID=MS.gene21488.t1.exon9;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7177866 | 7177934 | 7177866 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7178283 | 7178330 | 7178283 | ID=MS.gene21488.t1.exon10;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7178283 | 7178330 | 7178283 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
chr5.3 | exon | 7178717 | 7178878 | 7178717 | ID=MS.gene21488.t1.exon11;Parent=MS.gene21488.t1 |
chr5.3 | CDS | 7178717 | 7178878 | 7178717 | ID=cds.MS.gene21488.t1;Parent=MS.gene21488.t1 |
Gene Sequence |
Protein sequence |