Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21559.t1 | AES61869.1 | 73.9 | 157 | 17 | 2 | 1 | 145 | 1 | 145 | 7.50E-54 | 219.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21559.t1 | Q8W4H1 | 60.0 | 35 | 14 | 0 | 4 | 38 | 13 | 47 | 4.5e-07 | 55.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21559.t1 | G7I2W4 | 73.9 | 157 | 17 | 2 | 1 | 145 | 1 | 145 | 5.4e-54 | 219.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene21559.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21559.t1 | MTR_1g089830 | 75.159 | 157 | 15 | 2 | 1 | 145 | 1 | 145 | 6.31e-78 | 227 |
| MS.gene21559.t1 | MTR_1g045040 | 71.014 | 138 | 33 | 1 | 1 | 138 | 1 | 131 | 9.73e-60 | 181 |
| MS.gene21559.t1 | MTR_8g089170 | 42.667 | 150 | 67 | 5 | 3 | 134 | 4 | 152 | 4.95e-29 | 103 |
| MS.gene21559.t1 | MTR_8g089130 | 39.610 | 154 | 74 | 4 | 3 | 137 | 4 | 157 | 3.60e-28 | 102 |
| MS.gene21559.t1 | MTR_8g039350 | 77.273 | 44 | 10 | 0 | 3 | 46 | 14 | 57 | 3.67e-19 | 76.3 |
| MS.gene21559.t1 | MTR_1g075130 | 66.216 | 74 | 21 | 1 | 67 | 140 | 14 | 83 | 5.18e-18 | 73.9 |
| MS.gene21559.t1 | MTR_4g028990 | 43.956 | 91 | 48 | 2 | 49 | 137 | 7 | 96 | 2.92e-17 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 28 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTTGGGTTTGAAAGCTT+TGG | 0.278312 | 1.1:+65750370 | None:intergenic |
| GAGTTGGGTTTGAAAGCTTT+GGG | 0.313526 | 1.1:+65750371 | None:intergenic |
| ATAGTCTTCAAGGGTTCCTT+TGG | 0.332237 | 1.1:+65750459 | None:intergenic |
| TCAAACAACAAAATATTATC+TGG | 0.350768 | 1.1:+65748537 | None:intergenic |
| CACAAGATTGGCTTCTCATA+TGG | 0.363409 | 1.1:+65750508 | None:intergenic |
| TTTCAACAGAAACTAAAGTT+TGG | 0.373286 | 1.1:-65750540 | MS.gene21559:CDS |
| ATACTTTGCTGAGCTATCTT+CGG | 0.400089 | 1.1:+65750433 | None:intergenic |
| GACTATGAGGCCGACACTAA+TGG | 0.401191 | 1.1:-65748640 | MS.gene21559:CDS |
| TACTTTGCTGAGCTATCTTC+GGG | 0.431538 | 1.1:+65750434 | None:intergenic |
| CCAAGTAATGAGATCGGCCT+TGG | 0.442800 | 1.1:-65748495 | MS.gene21559:CDS |
| CCACAGGCGTTACACAAGAT+TGG | 0.446240 | 1.1:+65750496 | None:intergenic |
| GAAACTAAAGTTTGGCGTAA+AGG | 0.450000 | 1.1:-65750532 | MS.gene21559:CDS |
| TCTTCGGGAGATAGTCTTCA+AGG | 0.462167 | 1.1:+65750449 | None:intergenic |
| CCAAGGCCGATCTCATTACT+TGG | 0.469229 | 1.1:+65748495 | None:intergenic |
| CGCCTGTGGATTGCATTTCA+AGG | 0.472275 | 1.1:-65750482 | MS.gene21559:CDS |
| GGCCTTGAAATGCAATCCAC+AGG | 0.512475 | 1.1:+65750480 | None:intergenic |
| GTCAGTGTCTCCATTAGTGT+CGG | 0.538511 | 1.1:+65748630 | None:intergenic |
| AAGCTTTCAAACCCAACTCC+AGG | 0.571736 | 1.1:-65750367 | MS.gene21559:intron |
| ATTAGTGTCGGCCTCATAGT+CGG | 0.574226 | 1.1:+65748642 | None:intergenic |
| AGCTCAGCAAAGTATGTCAT+CGG | 0.576312 | 1.1:-65750425 | MS.gene21559:CDS |
| AGAGGTCGGCACCGACTATG+AGG | 0.586753 | 1.1:-65748653 | MS.gene21559:CDS |
| AATGGAGACACTGACACCAA+TGG | 0.595378 | 1.1:-65748622 | MS.gene21559:CDS |
| TTTATACCAAGTAATGAGAT+CGG | 0.595926 | 1.1:-65748501 | MS.gene21559:CDS |
| CCAATCTTGTGTAACGCCTG+TGG | 0.600058 | 1.1:-65750496 | MS.gene21559:CDS |
| CTTCGGGAGATAGTCTTCAA+GGG | 0.601274 | 1.1:+65750450 | None:intergenic |
| TCTTTAGAAGAGTGCAGCCA+AGG | 0.606342 | 1.1:+65748478 | None:intergenic |
| GGATTGCATTTCAAGGCCAA+AGG | 0.606742 | 1.1:-65750475 | MS.gene21559:CDS |
| GGAGACACTGACACCAATGG+AGG | 0.696756 | 1.1:-65748619 | MS.gene21559:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTAAAAACTTTAG+CGG | + | chr1.1:65748777-65748796 | None:intergenic | 10.0% |
| !! | ATAGAATCATCTTTAAATTA+TGG | + | chr1.1:65749396-65749415 | None:intergenic | 15.0% |
| !! | TAATCATTTATTTGTATCAT+CGG | + | chr1.1:65750244-65750263 | None:intergenic | 15.0% |
| !! | TCATATACAATACATATTAA+TGG | + | chr1.1:65750268-65750287 | None:intergenic | 15.0% |
| !! | TTTAAGCTAATGATATTATA+AGG | - | chr1.1:65749606-65749625 | MS.gene21559:intron | 15.0% |
| !!! | TTATAATATCATTAGCTTAA+AGG | + | chr1.1:65749607-65749626 | None:intergenic | 15.0% |
| !! | ACAACTCATATATAAATGTT+AGG | + | chr1.1:65748948-65748967 | None:intergenic | 20.0% |
| !! | ATCAATCAATGCATTATAAA+AGG | + | chr1.1:65748725-65748744 | None:intergenic | 20.0% |
| !! | ATGCATTATAAAAGGAAAAA+TGG | + | chr1.1:65748717-65748736 | None:intergenic | 20.0% |
| !! | CAACTCATATATAAATGTTA+GGG | + | chr1.1:65748947-65748966 | None:intergenic | 20.0% |
| !! | GAAAAATGGATGATATAAAA+TGG | + | chr1.1:65748703-65748722 | None:intergenic | 20.0% |
| !! | TCAAACAACAAAATATTATC+TGG | + | chr1.1:65750447-65750466 | None:intergenic | 20.0% |
| !!! | AACAAAAACTTTTCAATCTA+TGG | - | chr1.1:65750391-65750410 | MS.gene21559:CDS | 20.0% |
| !!! | AATAACTTCAGCTTTAAATT+TGG | + | chr1.1:65748670-65748689 | None:intergenic | 20.0% |
| !!! | ACAAAAACTTTTCAATCTAT+GGG | - | chr1.1:65750392-65750411 | MS.gene21559:CDS | 20.0% |
| !!! | CTTTAAATTTGGTGAAATAT+GGG | + | chr1.1:65748659-65748678 | None:intergenic | 20.0% |
| ! | AAATGGATGATATAAAATGG+AGG | + | chr1.1:65748700-65748719 | None:intergenic | 25.0% |
| ! | AATGGATGATATAAAATGGA+GGG | + | chr1.1:65748699-65748718 | None:intergenic | 25.0% |
| ! | ATAGTTTACATTTCCTTGTT+AGG | - | chr1.1:65749944-65749963 | MS.gene21559:intron | 25.0% |
| ! | ATTGTACGAATATTCTTAAC+GGG | - | chr1.1:65748891-65748910 | MS.gene21559:intron | 25.0% |
| ! | CATTGTACGAATATTCTTAA+CGG | - | chr1.1:65748890-65748909 | MS.gene21559:intron | 25.0% |
| ! | CGATTGAAAATGAAAATGAT+GGG | - | chr1.1:65748809-65748828 | MS.gene21559:intron | 25.0% |
| ! | CTTGACATTGAAAAAATATC+TGG | - | chr1.1:65748581-65748600 | MS.gene21559:CDS | 25.0% |
| ! | TATTTGTCTAACTTGAAACA+TGG | + | chr1.1:65749473-65749492 | None:intergenic | 25.0% |
| ! | TCGATTGAAAATGAAAATGA+TGG | - | chr1.1:65748808-65748827 | MS.gene21559:intron | 25.0% |
| ! | TCGTAATTTCTTTGATGTTA+TGG | - | chr1.1:65749735-65749754 | MS.gene21559:intron | 25.0% |
| ! | TTTATACCAAGTAATGAGAT+CGG | - | chr1.1:65750480-65750499 | MS.gene21559:CDS | 25.0% |
| ! | TTTCAACAGAAACTAAAGTT+TGG | - | chr1.1:65748441-65748460 | MS.gene21559:CDS | 25.0% |
| !! | AATTTTTATTACCTGGAGTT+GGG | + | chr1.1:65748628-65748647 | None:intergenic | 25.0% |
| !! | GAATTGCAATTTTTATTACC+TGG | + | chr1.1:65748635-65748654 | None:intergenic | 25.0% |
| !! | GCTTTAAATTTGGTGAAATA+TGG | + | chr1.1:65748660-65748679 | None:intergenic | 25.0% |
| !!! | ATTGATAGTGAAGCAAATTA+CGG | + | chr1.1:65748982-65749001 | None:intergenic | 25.0% |
| !!! | CAGATATTTTTTCAATGTCA+AGG | + | chr1.1:65748583-65748602 | None:intergenic | 25.0% |
| !!! | TTGTTCAAAAGTACTATTGT+TGG | - | chr1.1:65749213-65749232 | MS.gene21559:intron | 25.0% |
| AAACAATGAACCATGATGTT+TGG | + | chr1.1:65749066-65749085 | None:intergenic | 30.0% | |
| AAAGACAACTAAAGAAGAGT+TGG | - | chr1.1:65750160-65750179 | MS.gene21559:intron | 30.0% | |
| AACTTTGTAACCAAACATCA+TGG | - | chr1.1:65749053-65749072 | MS.gene21559:intron | 30.0% | |
| AGGAATTATGAAGGTTAGAA+AGG | - | chr1.1:65749140-65749159 | MS.gene21559:intron | 30.0% | |
| ATAAGTAGTGTAAAATGGAC+AGG | - | chr1.1:65748840-65748859 | MS.gene21559:intron | 30.0% | |
| ATGCCAACATGAGTATTATT+GGG | - | chr1.1:65749821-65749840 | MS.gene21559:intron | 30.0% | |
| CAAATTTCAACTACCTAACA+AGG | + | chr1.1:65749960-65749979 | None:intergenic | 30.0% | |
| CATTCACATTCTATTTGAGT+AGG | + | chr1.1:65749669-65749688 | None:intergenic | 30.0% | |
| CTTGTTAGGTAGTTGAAATT+TGG | - | chr1.1:65749958-65749977 | MS.gene21559:intron | 30.0% | |
| GACTCATAAGTAGTGTAAAA+TGG | - | chr1.1:65748835-65748854 | MS.gene21559:intron | 30.0% | |
| GATATTATAAGGTGTGAGAA+TGG | - | chr1.1:65749617-65749636 | MS.gene21559:intron | 30.0% | |
| GGAATTATGAAGGTTAGAAA+GGG | - | chr1.1:65749141-65749160 | MS.gene21559:intron | 30.0% | |
| TAATACTGATGAGATCAAAC+AGG | - | chr1.1:65749169-65749188 | MS.gene21559:intron | 30.0% | |
| TGATGTTTGGTTACAAAGTT+TGG | + | chr1.1:65749053-65749072 | None:intergenic | 30.0% | |
| TTCTATCATAAAGTCACCAT+TGG | + | chr1.1:65749708-65749727 | None:intergenic | 30.0% | |
| TTGCTTCACTATCAATAAGA+TGG | - | chr1.1:65748986-65749005 | MS.gene21559:intron | 30.0% | |
| ! | CAAATGAATCCTCTTTTCAT+TGG | + | chr1.1:65750038-65750057 | None:intergenic | 30.0% |
| ! | CAATTTTTATTACCTGGAGT+TGG | + | chr1.1:65748629-65748648 | None:intergenic | 30.0% |
| !!! | TAGTACCTTATTTTGTAGAG+AGG | - | chr1.1:65750310-65750329 | MS.gene21559:intron | 30.0% |
| AATGCCATTCCAATGAAAAG+AGG | - | chr1.1:65750026-65750045 | MS.gene21559:intron | 35.0% | |
| AGGATGTGAATATTGTGAGA+TGG | + | chr1.1:65749649-65749668 | None:intergenic | 35.0% | |
| AGTTTAAGCATGGATTTCCA+TGG | - | chr1.1:65749303-65749322 | MS.gene21559:intron | 35.0% | |
| ATAACCTTCTATGACTGCAT+TGG | - | chr1.1:65749490-65749509 | MS.gene21559:intron | 35.0% | |
| ATACTTTGCTGAGCTATCTT+CGG | + | chr1.1:65748551-65748570 | None:intergenic | 35.0% | |
| CATAGCATCAAAGAAGTCAT+TGG | + | chr1.1:65749896-65749915 | None:intergenic | 35.0% | |
| GAAACTAAAGTTTGGCGTAA+AGG | - | chr1.1:65748449-65748468 | MS.gene21559:CDS | 35.0% | |
| GATAACTTCCAAACAAGTGT+GGG | + | chr1.1:65749867-65749886 | None:intergenic | 35.0% | |
| GATGCCAACATGAGTATTAT+TGG | - | chr1.1:65749820-65749839 | MS.gene21559:intron | 35.0% | |
| GTTTAAGCATGGATTTCCAT+GGG | - | chr1.1:65749304-65749323 | MS.gene21559:intron | 35.0% | |
| TCTATACCCATCATACCTAT+AGG | + | chr1.1:65749121-65749140 | None:intergenic | 35.0% | |
| TGATAACTTCCAAACAAGTG+TGG | + | chr1.1:65749868-65749887 | None:intergenic | 35.0% | |
| TGCCAACATGAGTATTATTG+GGG | - | chr1.1:65749822-65749841 | MS.gene21559:intron | 35.0% | |
| TGGGTATAGAGGAATTATGA+AGG | - | chr1.1:65749131-65749150 | MS.gene21559:intron | 35.0% | |
| TTCCCCAATAATACTCATGT+TGG | + | chr1.1:65749827-65749846 | None:intergenic | 35.0% | |
| ! | AATCAGTGAGTTTTTCCTTG+AGG | - | chr1.1:65749783-65749802 | MS.gene21559:intron | 35.0% |
| ! | ATTCTTAACGGGTACAATTC+AGG | - | chr1.1:65748902-65748921 | MS.gene21559:intron | 35.0% |
| ! | GAATCCTCTTTTCATTGGAA+TGG | + | chr1.1:65750033-65750052 | None:intergenic | 35.0% |
| ! | TCTCTGCTATGTGGATTAAA+GGG | - | chr1.1:65749424-65749443 | MS.gene21559:intron | 35.0% |
| ! | TTCTTAACGGGTACAATTCA+GGG | - | chr1.1:65748903-65748922 | MS.gene21559:intron | 35.0% |
| ! | TTTCATTGGAATGGCATTGA+TGG | + | chr1.1:65750024-65750043 | None:intergenic | 35.0% |
| ! | TTTTGTTGAAACTCCTCCAT+TGG | + | chr1.1:65750378-65750397 | None:intergenic | 35.0% |
| !! | AATGGCATTGATGGTTTGAT+AGG | + | chr1.1:65750015-65750034 | None:intergenic | 35.0% |
| !! | TATAGGTATGATGGGTATAG+AGG | - | chr1.1:65749120-65749139 | MS.gene21559:intron | 35.0% |
| !!! | ACCTTATTTTGTAGAGAGGT+CGG | - | chr1.1:65750314-65750333 | MS.gene21559:intron | 35.0% |
| !!! | ATTGGGGAACACCTTTTTTA+TGG | - | chr1.1:65749838-65749857 | MS.gene21559:intron | 35.0% |
| AACTCCATAGTCTTCATGTC+TGG | - | chr1.1:65750119-65750138 | MS.gene21559:intron | 40.0% | |
| ACAACCAATGCAGTCATAGA+AGG | + | chr1.1:65749497-65749516 | None:intergenic | 40.0% | |
| ACCATATCAACGTCTTCCAA+TGG | - | chr1.1:65749689-65749708 | MS.gene21559:intron | 40.0% | |
| ACCATTGGAAGACGTTGATA+TGG | + | chr1.1:65749693-65749712 | None:intergenic | 40.0% | |
| AGCTCAGCAAAGTATGTCAT+CGG | - | chr1.1:65748556-65748575 | MS.gene21559:CDS | 40.0% | |
| AGTGTGGGACACCATAAAAA+AGG | + | chr1.1:65749852-65749871 | None:intergenic | 40.0% | |
| ATAGTCTTCAAGGGTTCCTT+TGG | + | chr1.1:65748525-65748544 | None:intergenic | 40.0% | |
| ATCTCCAGACATGAAGACTA+TGG | + | chr1.1:65750126-65750145 | None:intergenic | 40.0% | |
| ATGTGCAATCCATTGTGGTT+GGG | - | chr1.1:65749272-65749291 | MS.gene21559:intron | 40.0% | |
| CAGGTACTCAACATGACAAT+GGG | - | chr1.1:65749091-65749110 | MS.gene21559:intron | 40.0% | |
| CATTGTCATGTTGAGTACCT+GGG | + | chr1.1:65749092-65749111 | None:intergenic | 40.0% | |
| GAGTTGGGTTTGAAAGCTTT+GGG | + | chr1.1:65748613-65748632 | None:intergenic | 40.0% | |
| GGTTCTCCTATAGGTATGAT+GGG | - | chr1.1:65749112-65749131 | MS.gene21559:intron | 40.0% | |
| TACTTTGCTGAGCTATCTTC+GGG | + | chr1.1:65748550-65748569 | None:intergenic | 40.0% | |
| ! | ACGCTGCTAAAGTTTTCTAC+GGG | + | chr1.1:65749360-65749379 | None:intergenic | 40.0% |
| ! | ATGACAATGGGTTCTCCTAT+AGG | - | chr1.1:65749103-65749122 | MS.gene21559:intron | 40.0% |
| ! | CACGCTGCTAAAGTTTTCTA+CGG | + | chr1.1:65749361-65749380 | None:intergenic | 40.0% |
| ! | GTCTCTGCTATGTGGATTAA+AGG | - | chr1.1:65749423-65749442 | MS.gene21559:intron | 40.0% |
| ! | TCTTAACGGGTACAATTCAG+GGG | - | chr1.1:65748904-65748923 | MS.gene21559:intron | 40.0% |
| !! | AAAGTTTTCTACGGGTTGCA+TGG | + | chr1.1:65749352-65749371 | None:intergenic | 40.0% |
| !! | CACAAGATTGGCTTCTCATA+TGG | + | chr1.1:65748476-65748495 | None:intergenic | 40.0% |
| !! | TTCTATGACTGCATTGGTTG+TGG | - | chr1.1:65749496-65749515 | MS.gene21559:intron | 40.0% |
| AAGCTTTCAAACCCAACTCC+AGG | - | chr1.1:65748614-65748633 | MS.gene21559:CDS | 45.0% | |
| AATGGAGACACTGACACCAA+TGG | - | chr1.1:65750359-65750378 | MS.gene21559:intron | 45.0% | |
| ATGGTTCATTGTTTGTGCCC+AGG | - | chr1.1:65749072-65749091 | MS.gene21559:intron | 45.0% | |
| CCAGGTACTCAACATGACAA+TGG | - | chr1.1:65749090-65749109 | MS.gene21559:intron | 45.0% | |
| CCATGATGTGCAATCCATTG+TGG | - | chr1.1:65749267-65749286 | MS.gene21559:intron | 45.0% | |
| CCATTGTCATGTTGAGTACC+TGG | + | chr1.1:65749093-65749112 | None:intergenic | 45.0% | |
| CTTCGGGAGATAGTCTTCAA+GGG | + | chr1.1:65748534-65748553 | None:intergenic | 45.0% | |
| GATGTGCAATCCATTGTGGT+TGG | - | chr1.1:65749271-65749290 | MS.gene21559:intron | 45.0% | |
| GCCGACCTCTCTACAAAATA+AGG | + | chr1.1:65750318-65750337 | None:intergenic | 45.0% | |
| GGAGTTGGGTTTGAAAGCTT+TGG | + | chr1.1:65748614-65748633 | None:intergenic | 45.0% | |
| GGATTGCATTTCAAGGCCAA+AGG | - | chr1.1:65748506-65748525 | MS.gene21559:CDS | 45.0% | |
| GGCATGGTGTAGTTTAAGCA+TGG | - | chr1.1:65749293-65749312 | MS.gene21559:intron | 45.0% | |
| GGGTTCTCCTATAGGTATGA+TGG | - | chr1.1:65749111-65749130 | MS.gene21559:intron | 45.0% | |
| GGTTACCCAGAATGTCCAAA+CGG | + | chr1.1:65749331-65749350 | None:intergenic | 45.0% | |
| GTCAGTGTCTCCATTAGTGT+CGG | + | chr1.1:65750354-65750373 | None:intergenic | 45.0% | |
| TATGGTGTCCCACACTTGTT+TGG | - | chr1.1:65749856-65749875 | MS.gene21559:intron | 45.0% | |
| TCTTCGGGAGATAGTCTTCA+AGG | + | chr1.1:65748535-65748554 | None:intergenic | 45.0% | |
| TGAGAGTTGTCTCTGCTATG+TGG | - | chr1.1:65749415-65749434 | MS.gene21559:intron | 45.0% | |
| ! | GTTTTTCCTTGAGGTCCTTG+AGG | - | chr1.1:65749792-65749811 | MS.gene21559:intron | 45.0% |
| ! | TCTTTAGAAGAGTGCAGCCA+AGG | + | chr1.1:65750506-65750525 | None:intergenic | 45.0% |
| !! | ATTAGTGTCGGCCTCATAGT+CGG | + | chr1.1:65750342-65750361 | None:intergenic | 45.0% |
| !! | CCACAATGGATTGCACATCA+TGG | + | chr1.1:65749270-65749289 | None:intergenic | 45.0% |
| !! | GGCATTGATGGTTTGATAGG+TGG | + | chr1.1:65750012-65750031 | None:intergenic | 45.0% |
| AGAATGTCCAAACGGACCCA+TGG | + | chr1.1:65749323-65749342 | None:intergenic | 50.0% | |
| ATGGGTCCGTTTGGACATTC+TGG | - | chr1.1:65749322-65749341 | MS.gene21559:intron | 50.0% | |
| CAATCCATTGTGGTTGGGCA+TGG | - | chr1.1:65749277-65749296 | MS.gene21559:intron | 50.0% | |
| CCAAGGCCGATCTCATTACT+TGG | + | chr1.1:65750489-65750508 | None:intergenic | 50.0% | |
| CCAAGTAATGAGATCGGCCT+TGG | - | chr1.1:65750486-65750505 | MS.gene21559:CDS | 50.0% | |
| CCAATCTTGTGTAACGCCTG+TGG | - | chr1.1:65748485-65748504 | MS.gene21559:CDS | 50.0% | |
| CCACAGGCGTTACACAAGAT+TGG | + | chr1.1:65748488-65748507 | None:intergenic | 50.0% | |
| GACTATGAGGCCGACACTAA+TGG | - | chr1.1:65750341-65750360 | MS.gene21559:intron | 50.0% | |
| GGCCTTGAAATGCAATCCAC+AGG | + | chr1.1:65748504-65748523 | None:intergenic | 50.0% | |
| TACACCATGCCCAACCACAA+TGG | + | chr1.1:65749284-65749303 | None:intergenic | 50.0% | |
| TGGATTTCCATGGGTCCGTT+TGG | - | chr1.1:65749313-65749332 | MS.gene21559:intron | 50.0% | |
| TGGGTCCGTTTGGACATTCT+GGG | - | chr1.1:65749323-65749342 | MS.gene21559:intron | 50.0% | |
| TGTTGGCATCATGCACCTCA+AGG | + | chr1.1:65749810-65749829 | None:intergenic | 50.0% | |
| ! | CGCCTGTGGATTGCATTTCA+AGG | - | chr1.1:65748499-65748518 | MS.gene21559:CDS | 50.0% |
| CATGCACCTCAAGGACCTCA+AGG | + | chr1.1:65749801-65749820 | None:intergenic | 55.0% | |
| GGAGACACTGACACCAATGG+AGG | - | chr1.1:65750362-65750381 | MS.gene21559:intron | 55.0% | |
| !! | AGAGGTCGGCACCGACTATG+AGG | - | chr1.1:65750328-65750347 | MS.gene21559:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 65748437 | 65750566 | 65748437 | ID=MS.gene21559 |
| chr1.1 | mRNA | 65748437 | 65750566 | 65748437 | ID=MS.gene21559.t1;Parent=MS.gene21559 |
| chr1.1 | exon | 65750368 | 65750566 | 65750368 | ID=MS.gene21559.t1.exon1;Parent=MS.gene21559.t1 |
| chr1.1 | CDS | 65750368 | 65750566 | 65750368 | ID=cds.MS.gene21559.t1;Parent=MS.gene21559.t1 |
| chr1.1 | exon | 65748437 | 65748675 | 65748437 | ID=MS.gene21559.t1.exon2;Parent=MS.gene21559.t1 |
| chr1.1 | CDS | 65748437 | 65748675 | 65748437 | ID=cds.MS.gene21559.t1;Parent=MS.gene21559.t1 |
| Gene Sequence |
| Protein sequence |