AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21944

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21944.t1 MTR_0645s0010 56.589 129 52 2 252 380 1 125 7.36e-40 143
MS.gene21944.t1 MTR_7g446520 38.222 225 111 4 6 218 47 255 8.35e-38 144
MS.gene21944.t1 MTR_8g035530 77.632 76 16 1 28 102 1 76 7.05e-32 119
MS.gene21944.t1 MTR_7g028855 42.763 152 82 1 33 179 112 263 4.82e-30 124
MS.gene21944.t1 MTR_7g446480 37.500 152 89 1 113 264 140 285 9.18e-27 112
MS.gene21944.t1 MTR_5g076070 30.723 166 110 2 38 198 50 215 1.86e-24 104
MS.gene21944.t1 MTR_7g446510 45.872 109 56 1 113 218 155 263 2.38e-24 105
MS.gene21944.t1 MTR_3g080590 54.651 86 39 0 5 90 69 154 9.44e-24 98.6
MS.gene21944.t1 MTR_4g035820 28.242 347 204 10 44 348 78 421 1.58e-23 106
MS.gene21944.t1 MTR_0402s0040 28.829 222 131 5 45 262 30 228 1.66e-21 99.4
MS.gene21944.t1 MTR_1g070355 30.636 173 112 2 41 208 74 243 1.96e-21 99.4
MS.gene21944.t1 MTR_6g022080 29.825 171 113 2 34 198 78 247 3.79e-21 94.0
MS.gene21944.t1 MTR_6g022070 31.298 131 90 0 208 338 35 165 9.57e-19 89.0
MS.gene21944.t1 MTR_6g051425 27.957 186 123 5 40 215 16 200 3.86e-15 77.8
MS.gene21944.t1 MTR_7g061980 34.862 109 65 2 44 148 13 119 4.21e-14 69.7
MS.gene21944.t1 MTR_8g468460 36.735 98 61 1 296 393 9 105 5.37e-13 66.2
MS.gene21944.t1 MTR_1g008290 30.833 120 72 3 81 200 1 109 7.70e-13 67.0
MS.gene21944.t1 MTR_5g015480 33.077 130 80 3 45 167 60 189 1.35e-12 68.9
MS.gene21944.t1 MTR_4g067290 35.000 100 63 2 44 141 59 158 2.95e-12 67.4
MS.gene21944.t1 MTR_4g067290 35.000 100 63 2 44 141 59 158 3.25e-12 67.4
MS.gene21944.t1 MTR_2g098920 35.514 107 67 2 39 143 78 184 5.25e-12 67.4
MS.gene21944.t1 MTR_4g067290 35.000 100 63 2 44 141 79 178 5.30e-12 67.4
MS.gene21944.t1 MTR_4g067290 35.000 100 63 2 44 141 79 178 5.45e-12 67.0
MS.gene21944.t1 MTR_4g067290 35.000 100 63 2 44 141 77 176 5.66e-12 67.0
MS.gene21944.t1 MTR_4g067290 35.000 100 63 2 44 141 119 218 6.52e-12 67.8
MS.gene21944.t1 MTR_7g074790 29.814 161 89 3 44 200 13 153 1.22e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21944.t1 AT4G38180 28.821 229 162 1 210 438 411 638 8.41e-31 130
MS.gene21944.t1 AT4G38180 34.562 217 132 6 2 209 32 247 2.35e-22 103
MS.gene21944.t1 AT2G27110 29.302 215 149 2 220 434 368 579 2.25e-27 119
MS.gene21944.t1 AT2G27110 29.302 215 149 2 220 434 368 579 2.25e-27 119
MS.gene21944.t1 AT2G27110 29.302 215 149 2 220 434 223 434 2.93e-27 118
MS.gene21944.t1 AT4G38170 25.333 225 167 1 210 434 176 399 1.18e-26 115
MS.gene21944.t1 AT1G76320 27.602 221 156 3 215 435 329 545 3.43e-25 112
MS.gene21944.t1 AT1G76320 27.602 221 156 3 215 435 329 545 3.56e-25 112
MS.gene21944.t1 AT1G76320 27.602 221 156 3 215 435 329 545 3.56e-25 112
MS.gene21944.t1 AT4G15090 24.126 286 207 3 154 439 339 614 3.94e-25 112
MS.gene21944.t1 AT4G15090 24.126 286 207 3 154 439 339 614 3.94e-25 112
MS.gene21944.t1 AT4G15090 24.126 286 207 3 154 439 339 614 3.94e-25 112
MS.gene21944.t1 AT4G15090 24.126 286 207 3 154 439 339 614 3.94e-25 112
MS.gene21944.t1 AT4G15090 24.126 286 207 3 154 439 339 614 3.94e-25 112
MS.gene21944.t1 AT1G76320 27.602 221 156 3 215 435 329 545 6.40e-25 110
MS.gene21944.t1 AT5G18960 25.547 274 197 4 210 482 508 775 3.28e-24 109
MS.gene21944.t1 AT5G18960 36.434 129 58 5 13 139 25 131 4.14e-11 67.0
MS.gene21944.t1 AT5G18960 25.547 274 197 4 210 482 508 775 3.28e-24 109
MS.gene21944.t1 AT5G18960 36.434 129 58 5 13 139 25 131 4.14e-11 67.0
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 330 572 8.12e-23 104
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 330 572 8.12e-23 104
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 273 515 9.94e-23 104
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 330 572 1.27e-22 103
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 330 572 1.27e-22 103
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 330 572 1.43e-22 103
MS.gene21944.t1 AT4G19990 24.696 247 180 4 205 449 344 586 1.51e-22 103
MS.gene21944.t1 AT3G22170 26.201 229 167 2 211 439 397 623 1.85e-22 103
MS.gene21944.t1 AT3G22170 26.201 229 167 2 211 439 397 623 1.85e-22 103
MS.gene21944.t1 AT3G06250 24.910 277 195 6 210 482 484 751 2.94e-22 102
MS.gene21944.t1 AT3G06250 24.910 277 195 6 210 482 484 751 2.94e-22 102
MS.gene21944.t1 AT3G06250 24.910 277 195 6 210 482 484 751 2.94e-22 102
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 275 553 1.77e-18 90.9
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 275 553 1.98e-18 90.5
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 316 594 2.04e-18 90.9
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 316 594 2.04e-18 90.9
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 316 594 2.04e-18 90.9
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 316 594 2.11e-18 90.5
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 316 594 2.11e-18 90.5
MS.gene21944.t1 AT2G32250 23.345 287 203 5 195 472 316 594 3.04e-18 90.1
MS.gene21944.t1 AT1G52520 24.242 231 168 2 211 434 408 638 9.98e-18 88.2
MS.gene21944.t1 AT1G80010 24.583 240 174 5 214 447 436 674 1.29e-17 87.8
MS.gene21944.t1 AT3G07500 36.842 152 82 6 16 157 3 150 8.76e-16 77.4
MS.gene21944.t1 AT1G10240 21.339 239 170 6 201 431 376 604 1.45e-13 75.1
MS.gene21944.t1 AT1G10240 29.545 176 115 5 44 210 51 226 4.35e-12 70.1
MS.gene21944.t1 AT1G10240 21.339 239 170 6 201 431 376 604 1.45e-13 75.1
MS.gene21944.t1 AT1G10240 29.545 176 115 5 44 210 51 226 4.35e-12 70.1
MS.gene21944.t1 AT4G12850 37.705 122 71 3 39 156 9 129 1.76e-12 67.0
MS.gene21944.t1 AT4G12850 40.196 102 59 2 39 139 9 109 2.64e-12 65.5
MS.gene21944.t1 AT3G59470 37.963 108 63 3 39 143 68 174 2.76e-12 68.2
MS.gene21944.t1 AT3G59470 37.963 108 63 3 39 143 68 174 2.76e-12 68.2
MS.gene21944.t1 AT3G59470 37.963 108 63 3 39 143 80 186 3.38e-12 68.2
MS.gene21944.t1 AT4G12850 40.196 102 59 2 39 139 9 109 5.63e-12 64.3

Find 137 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTAATAAATGGAGAGTTTC+TGG 0.125465 5.1:+2861013 MS.gene21944:CDS
GTCTCATGGCACAAATAATA+TGG 0.181170 5.1:-2862341 None:intergenic
GTAATCATCCTTTGCTGATT+TGG 0.196309 5.1:-2862412 None:intergenic
CATCTTTCCATGTTACATTT+TGG 0.217563 5.1:-2863317 None:intergenic
AGTTGTCTGCTCGTGGAAAT+TGG 0.230194 5.1:-2863479 None:intergenic
AAAGTAGATGCAATTTGATT+TGG 0.270824 5.1:-2863417 None:intergenic
AAAATTGATGCACCTTGATT+TGG 0.276898 5.1:-2863453 None:intergenic
TCACTCAATTGACGGTTCTT+AGG 0.285255 5.1:-2861091 None:intergenic
AAGACCAATCCATCTGTTAT+TGG 0.288862 5.1:+2862627 MS.gene21944:CDS
TAAATGTTGATACTAATAAA+TGG 0.290315 5.1:+2861002 MS.gene21944:CDS
CATTCAAGTTCTGTTGGATA+TGG 0.304475 5.1:+2863510 MS.gene21944:CDS
GAAAGGAGGTCATGAGAGTT+TGG 0.304832 5.1:+2861192 MS.gene21944:CDS
CTCTATTTATGTTAGTTTGT+GGG 0.306610 5.1:+2863642 MS.gene21944:intron
CCTTTGGCCTTGGCTTTGAT+AGG 0.324333 5.1:-2862654 None:intergenic
TTGGCGCCGGTAAAATAATT+AGG 0.326324 5.1:-2863354 None:intergenic
TTGCTTGTGATTCGAGAGTT+TGG 0.328361 5.1:-2863724 None:intergenic
ATACAGGCACAAAGAGTTAA+TGG 0.341245 5.1:+2862029 MS.gene21944:CDS
GTTGTCTGCTCGTGGAAATT+GGG 0.345810 5.1:-2863478 None:intergenic
ACGAGGGGCACCTTTGGCCT+TGG 0.345904 5.1:-2862664 None:intergenic
TGAAGAAGGAAAAGAGGATA+TGG 0.353695 5.1:+2860709 MS.gene21944:CDS
TGGATACTTACAAGAAGATT+AGG 0.354642 5.1:+2860729 MS.gene21944:CDS
AGACATAAATGGTGAGGATT+TGG 0.368884 5.1:+2860664 MS.gene21944:CDS
ATAGCCTCTTTATAATCATC+TGG 0.369789 5.1:-2862543 None:intergenic
GCAATTTGATTTGGAAATTG+AGG 0.377041 5.1:-2863408 None:intergenic
CTTCTTACGAGGGGCACCTT+TGG 0.378868 5.1:-2862670 None:intergenic
AAGATCGGAACACTTTGAAT+TGG 0.379246 5.1:-2863384 None:intergenic
GCAAACGATGGAGACATAAA+TGG 0.387588 5.1:+2860653 MS.gene21944:CDS
ACATCACGTCCAGCTAGTTC+TGG 0.392972 5.1:-2862762 None:intergenic
ACAATTTATCACACAATACA+TGG 0.415400 5.1:+2861827 MS.gene21944:CDS
AAGTTTAAGATGAATAGATT+TGG 0.423772 5.1:+2862222 MS.gene21944:CDS
TCTGATAAAGCCCTTGTTGA+TGG 0.424223 5.1:+2861115 MS.gene21944:CDS
CTGATAGTCTAATTTGCAAA+AGG 0.431391 5.1:+2862385 MS.gene21944:CDS
CGAGTTTATGCCTTCACACC+TGG 0.432567 5.1:-2861932 None:intergenic
AAAGGAGGTCATGAGAGTTT+GGG 0.434352 5.1:+2861193 MS.gene21944:CDS
TATCAGATTCACTCAATTGA+CGG 0.439464 5.1:-2861099 None:intergenic
CCATCACATTCAAGTTCTGT+TGG 0.440650 5.1:+2863504 MS.gene21944:CDS
TGTAGACAGTTTGAACGGAT+TGG 0.441359 5.1:+2862306 MS.gene21944:CDS
GAAGGAAAGGCAAGAATAGA+AGG 0.447532 5.1:+2861253 MS.gene21944:CDS
AGAAGAAAACATCCAGGAAA+AGG 0.448830 5.1:+2862691 MS.gene21944:CDS
TATTATTTGTGCCATGAGAC+AGG 0.458720 5.1:+2862344 MS.gene21944:CDS
CAATAAAAGAATATCAAAAC+AGG 0.462051 5.1:+2863009 MS.gene21944:CDS
GGATACTTACAAGAAGATTA+GGG 0.465987 5.1:+2860730 MS.gene21944:CDS
CAAGAAGATTAGGGAATTGA+CGG 0.467663 5.1:+2860739 MS.gene21944:CDS
AGGAACGAAATGAGCATAAC+GGG 0.473396 5.1:-2861071 None:intergenic
ATTTATGTCTCCATCGTTTG+CGG 0.473976 5.1:-2860651 None:intergenic
GTTTGTGGGTGCCTTGGAGA+TGG 0.474241 5.1:+2863656 MS.gene21944:intron
AATGGTGTGTTTAATGAAGA+AGG 0.477078 5.1:+2860695 MS.gene21944:CDS
GAAATCTATGCGGATTGTCA+TGG 0.487261 5.1:+2860818 MS.gene21944:CDS
TCTCATGGCACAAATAATAT+GGG 0.492357 5.1:-2862340 None:intergenic
ATAGAGCTGTAAAAGAATAC+AGG 0.492679 5.1:+2862013 MS.gene21944:CDS
GGATGATGATATAAGAGGAT+TGG 0.496802 5.1:+2860760 MS.gene21944:CDS
TTGACGGATGATGATATAAG+AGG 0.497315 5.1:+2860755 MS.gene21944:CDS
CTCAATTTCAAATTTGTCCA+CGG 0.497600 5.1:-2861782 None:intergenic
TATAACTACTTATACAATGA+AGG 0.501991 5.1:+2861235 MS.gene21944:CDS
TTTGGAAATTGAGGAAAGAT+CGG 0.506335 5.1:-2863399 None:intergenic
ATCACCAATAACAGATGGAT+TGG 0.508027 5.1:-2862631 None:intergenic
AGGATTGGAATTTGATTCAG+AGG 0.508865 5.1:+2860775 MS.gene21944:CDS
GATGTAAACAAAGATGATGA+TGG 0.508994 5.1:+2860860 MS.gene21944:CDS
TAGATTGAAAATGAAGGGAT+TGG 0.509056 5.1:+2863100 MS.gene21944:intron
GTATCTAGTTTATCTTGATA+CGG 0.509350 5.1:+2862260 MS.gene21944:CDS
TTGTACTAGATTGAAAATGA+AGG 0.514645 5.1:+2863094 MS.gene21944:intron
ATGTTAGTTTGTGGGTGCCT+TGG 0.517199 5.1:+2863650 MS.gene21944:intron
GAGGATTTGGCCAACGGTAA+TGG 0.518248 5.1:+2860677 MS.gene21944:CDS
AGTCTGGTTGATTTCATGCA+TGG 0.520881 5.1:+2861985 MS.gene21944:CDS
AAAATGGATAAGAATATATG+TGG 0.522705 5.1:+2863690 MS.gene21944:CDS
AATTTGAAATTGAGTGGAAG+AGG 0.523012 5.1:+2861791 MS.gene21944:CDS
AACTCTCGAATCACAAGCAA+TGG 0.523630 5.1:+2863727 MS.gene21944:CDS
AGATGATTATAAAGAGGCTA+TGG 0.524840 5.1:+2862545 MS.gene21944:CDS
AATTGGAACACCGTTGGCGC+CGG 0.526797 5.1:-2863367 None:intergenic
TGCGGATTGTCATGGGTTTG+TGG 0.527631 5.1:+2860826 MS.gene21944:CDS
TTGTCTGCTCGTGGAAATTG+GGG 0.529245 5.1:-2863477 None:intergenic
AGAAACAAAGTACATATTCG+AGG 0.529955 5.1:+2860936 MS.gene21944:CDS
ACTTTGAATTGGAACACCGT+TGG 0.530199 5.1:-2863373 None:intergenic
AAATCTATGCGGATTGTCAT+GGG 0.530849 5.1:+2860819 MS.gene21944:CDS
ATAGTCTAATTTGCAAAAGG+TGG 0.533689 5.1:+2862388 MS.gene21944:CDS
CAACAGAACTTGAATGTGAT+GGG 0.534436 5.1:-2863503 None:intergenic
CAAAATGTAACATGGAAAGA+TGG 0.535009 5.1:+2863318 MS.gene21944:CDS
CCAACAGAACTTGAATGTGA+TGG 0.535015 5.1:-2863504 None:intergenic
TGCTAATCGTTCCATCTCCA+AGG 0.539064 5.1:-2863667 None:intergenic
ATTTAAATGGCCGCAAACGA+TGG 0.539363 5.1:+2860641 None:intergenic
TGCAGAACACTTAGTTCGAA+TGG 0.539821 5.1:-2860963 None:intergenic
TGTACTAGATTGAAAATGAA+GGG 0.540164 5.1:+2863095 MS.gene21944:intron
GTGGCATAAGAACTACATCC+AGG 0.542673 5.1:+2861914 MS.gene21944:CDS
TGGACAAATTTGAAATTGAG+TGG 0.544484 5.1:+2861785 MS.gene21944:CDS
AATCATGTGCTCCTGTCTCA+TGG 0.545635 5.1:-2862355 None:intergenic
ATTAAACACACCATTACCGT+TGG 0.550414 5.1:-2860687 None:intergenic
GTGCGTGAAGGCCATCAACA+AGG 0.552340 5.1:-2861126 None:intergenic
ACACCCAGATGATTATAAAG+AGG 0.558171 5.1:+2862539 MS.gene21944:CDS
AATGTCCAGAGTCAAGATCA+AGG 0.560616 5.1:+2863258 MS.gene21944:intron
TAGGAACGAAATGAGCATAA+CGG 0.561873 5.1:-2861072 None:intergenic
TGATTATAAAGAGGCTATGG+AGG 0.565059 5.1:+2862548 MS.gene21944:CDS
CAAAACTGTCCAGAACTAGC+TGG 0.566062 5.1:+2862753 MS.gene21944:CDS
TGTAACTTTGTTGTCAACAC+AGG 0.566833 5.1:-2862078 None:intergenic
GTTTAATGAAGAAGGAAAAG+AGG 0.567512 5.1:+2860703 MS.gene21944:CDS
ATAGGATCACCAATAACAGA+TGG 0.568307 5.1:-2862636 None:intergenic
TCTAAATGAAGTCAATGAAG+AGG 0.568616 5.1:+2862785 MS.gene21944:CDS
TAGCCTCTTTATAATCATCT+GGG 0.570856 5.1:-2862542 None:intergenic
GTTGATGGCCTTCACGCACA+CGG 0.573850 5.1:+2861130 MS.gene21944:CDS
ATTTGAAATTGAGTGGAAGA+GGG 0.577779 5.1:+2861792 MS.gene21944:CDS
AACGGGTTGGAGTTAACTCA+TGG 0.579913 5.1:-2861054 None:intergenic
CTACTTATACAATGAAGGAA+AGG 0.581665 5.1:+2861240 MS.gene21944:CDS
ATGTAAACAAAGATGATGAT+GGG 0.584402 5.1:+2860861 MS.gene21944:CDS
GTGATTGTAGACAGTTTGAA+CGG 0.585179 5.1:+2862301 MS.gene21944:CDS
TTCTAACACCGTGTGCGTGA+AGG 0.586649 5.1:-2861138 None:intergenic
CAATTTATCACACAATACAT+GGG 0.590150 5.1:+2861828 MS.gene21944:CDS
AGTTAACTCATGGTTGTGTG+AGG 0.591294 5.1:-2861044 None:intergenic
GATTATAAAGAGGCTATGGA+GGG 0.593735 5.1:+2862549 MS.gene21944:CDS
TACTCACAGTTGTATGATGA+GGG 0.598663 5.1:-2863548 None:intergenic
AGAACTACATCCAGGTGTGA+AGG 0.599918 5.1:+2861922 MS.gene21944:CDS
TCGATTAGTATGTAATAGAG+AGG 0.600970 5.1:+2860898 MS.gene21944:CDS
ATAAAGAGGCGTCGTGAGAG+TGG 0.603066 5.1:+2862594 MS.gene21944:CDS
ACGAAATGAGCATAACGGGT+TGG 0.604271 5.1:-2861067 None:intergenic
ATTTGTGTGAGAAAATAAAG+AGG 0.607012 5.1:+2862580 MS.gene21944:CDS
TTTATGCTGGCTCAGAAAGG+AGG 0.607302 5.1:+2861178 MS.gene21944:CDS
TGTTGACAACAAAGTTACAC+AGG 0.607980 5.1:+2862082 MS.gene21944:CDS
AATGGTGAGGATTTGGCCAA+CGG 0.609576 5.1:+2860671 MS.gene21944:CDS
CCTATCAAAGCCAAGGCCAA+AGG 0.609665 5.1:+2862654 MS.gene21944:CDS
TGGAAGACCAAAATGTAACA+TGG 0.612794 5.1:+2863310 MS.gene21944:CDS
GTGTTGATAAGAGTTGTGAC+AGG 0.616075 5.1:+2862939 MS.gene21944:CDS
TGGTGATCCTATCAAAGCCA+AGG 0.618217 5.1:+2862647 MS.gene21944:CDS
GTAAGAAGAAGAAAACATCC+AGG 0.620639 5.1:+2862685 MS.gene21944:CDS
GATGGGAAGTTGTCTGCTCG+TGG 0.621816 5.1:-2863486 None:intergenic
GTTAACTCATGGTTGTGTGA+GGG 0.630795 5.1:-2861043 None:intergenic
CGATGGAGACATAAATGGTG+AGG 0.630801 5.1:+2860658 MS.gene21944:CDS
ATACTCACAGTTGTATGATG+AGG 0.634928 5.1:-2863549 None:intergenic
CATATGAGATGAAGACAATG+TGG 0.635222 5.1:+2861860 MS.gene21944:CDS
CGATTAGTATGTAATAGAGA+GGG 0.642038 5.1:+2860899 MS.gene21944:CDS
GCACAAATAATATGGGAACA+TGG 0.643217 5.1:-2862333 None:intergenic
TGCGTGAAGGCCATCAACAA+GGG 0.643321 5.1:-2861125 None:intergenic
AAGGTGGACCAAATCAGCAA+AGG 0.645642 5.1:+2862404 MS.gene21944:CDS
GATTTATGCTAATTATACCG+TGG 0.646515 5.1:+2861765 MS.gene21944:CDS
ATTATAAAGAGGCTATGGAG+GGG 0.655805 5.1:+2862550 MS.gene21944:CDS
TTCGAACTAAGTGTTCTGCA+AGG 0.659792 5.1:+2860966 MS.gene21944:CDS
AAAATGTTCATGTTTCGTCG+AGG 0.666687 5.1:+2862471 MS.gene21944:CDS
ATATGAGATGAAGACAATGT+GGG 0.670288 5.1:+2861861 MS.gene21944:CDS
ATAATTAGCATAAATCAATG+AGG 0.681924 5.1:-2861758 None:intergenic
TGTCTGCTCGTGGAAATTGG+GGG 0.731356 5.1:-2863476 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGTTGATACTAATAAA+TGG + chr5.1:2861002-2861021 MS.gene21944:CDS 15.0%
!!! TTTAGAAAATTTATTTTGGT+CGG + chr5.1:2861369-2861388 MS.gene21944:intron 15.0%
!! AAAATGGATAAGAATATATG+TGG + chr5.1:2863690-2863709 MS.gene21944:CDS 20.0%
!! ATAATTAGCATAAATCAATG+AGG - chr5.1:2861761-2861780 None:intergenic 20.0%
!! CAATAAAAGAATATCAAAAC+AGG + chr5.1:2863009-2863028 MS.gene21944:CDS 20.0%
!! TATAACTACTTATACAATGA+AGG + chr5.1:2861235-2861254 MS.gene21944:CDS 20.0%
!!! AAGTTTAAGATGAATAGATT+TGG + chr5.1:2862222-2862241 MS.gene21944:CDS 20.0%
!!! AATTATAATTTGTTTGCACA+GGG + chr5.1:2862917-2862936 MS.gene21944:intron 20.0%
!!! ACAATTTTATGAAATCTATG+CGG + chr5.1:2860808-2860827 MS.gene21944:CDS 20.0%
!!! GACGTTTAGAAAATTTATTT+TGG + chr5.1:2861365-2861384 MS.gene21944:intron 20.0%
!!! TAATTATAATTTGTTTGCAC+AGG + chr5.1:2862916-2862935 MS.gene21944:intron 20.0%
!!! TATGTTCCTAATTATTTTAC+CGG + chr5.1:2863348-2863367 MS.gene21944:CDS 20.0%
! AAAGTAGATGCAATTTGATT+TGG - chr5.1:2863420-2863439 None:intergenic 25.0%
! ACAATTTATCACACAATACA+TGG + chr5.1:2861827-2861846 MS.gene21944:CDS 25.0%
! AGTAGTTTCTCATAGTTAAT+TGG + chr5.1:2863178-2863197 MS.gene21944:intron 25.0%
! ATGTAAACAAAGATGATGAT+GGG + chr5.1:2860861-2860880 MS.gene21944:CDS 25.0%
! ATTTGTGTGAGAAAATAAAG+AGG + chr5.1:2862580-2862599 MS.gene21944:CDS 25.0%
! CAATTTATCACACAATACAT+GGG + chr5.1:2861828-2861847 MS.gene21944:CDS 25.0%
! CATAAAACCAAAAATATGAC+AGG - chr5.1:2861164-2861183 None:intergenic 25.0%
! TGTACTAGATTGAAAATGAA+GGG + chr5.1:2863095-2863114 MS.gene21944:intron 25.0%
! TTGTACTAGATTGAAAATGA+AGG + chr5.1:2863094-2863113 MS.gene21944:intron 25.0%
!! GTAAACTTTGAAAAGAACAT+TGG - chr5.1:2861331-2861350 None:intergenic 25.0%
!! GTATCTAGTTTATCTTGATA+CGG + chr5.1:2862260-2862279 MS.gene21944:CDS 25.0%
!! TCTCTATTTATGTTAGTTTG+TGG + chr5.1:2863641-2863660 MS.gene21944:intron 25.0%
!! TTATCTGTCATGTTTTCATT+AGG - chr5.1:2863130-2863149 None:intergenic 25.0%
!!! AAGATACTTGATACTTTTTG+TGG + chr5.1:2863038-2863057 MS.gene21944:intron 25.0%
!!! CTCTATTTATGTTAGTTTGT+GGG + chr5.1:2863642-2863661 MS.gene21944:intron 25.0%
!!! TCATATTTTTGGTTTTATGC+TGG + chr5.1:2861165-2861184 MS.gene21944:CDS 25.0%
AAAATTGATGCACCTTGATT+TGG - chr5.1:2863456-2863475 None:intergenic 30.0%
AAGCTTCAAAAATCTTTACG+AGG + chr5.1:2862115-2862134 MS.gene21944:CDS 30.0%
AATGGTGTGTTTAATGAAGA+AGG + chr5.1:2860695-2860714 MS.gene21944:CDS 30.0%
ACTAATAAATGGAGAGTTTC+TGG + chr5.1:2861013-2861032 MS.gene21944:CDS 30.0%
AGAAACAAAGTACATATTCG+AGG + chr5.1:2860936-2860955 MS.gene21944:CDS 30.0%
AGATGATTATAAAGAGGCTA+TGG + chr5.1:2862545-2862564 MS.gene21944:CDS 30.0%
ATAGAGCTGTAAAAGAATAC+AGG + chr5.1:2862013-2862032 MS.gene21944:CDS 30.0%
ATAGCCTCTTTATAATCATC+TGG - chr5.1:2862546-2862565 None:intergenic 30.0%
ATATGAGATGAAGACAATGT+GGG + chr5.1:2861861-2861880 MS.gene21944:CDS 30.0%
ATGTATCATAAACAGCCTAA+AGG + chr5.1:2861595-2861614 MS.gene21944:intron 30.0%
CAAAAACACATTTAACACGA+TGG - chr5.1:2862866-2862885 None:intergenic 30.0%
CAAAATGTAACATGGAAAGA+TGG + chr5.1:2863318-2863337 MS.gene21944:CDS 30.0%
CGATTAGTATGTAATAGAGA+GGG + chr5.1:2860899-2860918 MS.gene21944:CDS 30.0%
CTACTTATACAATGAAGGAA+AGG + chr5.1:2861240-2861259 MS.gene21944:CDS 30.0%
CTCAATTTCAAATTTGTCCA+CGG - chr5.1:2861785-2861804 None:intergenic 30.0%
GATGTAAACAAAGATGATGA+TGG + chr5.1:2860860-2860879 MS.gene21944:CDS 30.0%
GATTTATGCTAATTATACCG+TGG + chr5.1:2861765-2861784 MS.gene21944:CDS 30.0%
GGATACTTACAAGAAGATTA+GGG + chr5.1:2860730-2860749 MS.gene21944:CDS 30.0%
GTTTAATGAAGAAGGAAAAG+AGG + chr5.1:2860703-2860722 MS.gene21944:CDS 30.0%
TAGATTGAAAATGAAGGGAT+TGG + chr5.1:2863100-2863119 MS.gene21944:intron 30.0%
TAGCCTCTTTATAATCATCT+GGG - chr5.1:2862545-2862564 None:intergenic 30.0%
TATCAGATTCACTCAATTGA+CGG - chr5.1:2861102-2861121 None:intergenic 30.0%
TCGATTAGTATGTAATAGAG+AGG + chr5.1:2860898-2860917 MS.gene21944:CDS 30.0%
TCTAAATGAAGTCAATGAAG+AGG + chr5.1:2862785-2862804 MS.gene21944:CDS 30.0%
TCTCATGGCACAAATAATAT+GGG - chr5.1:2862343-2862362 None:intergenic 30.0%
TGGATACTTACAAGAAGATT+AGG + chr5.1:2860729-2860748 MS.gene21944:CDS 30.0%
TGTATCATAAACAGCCTAAA+GGG + chr5.1:2861596-2861615 MS.gene21944:intron 30.0%
TGTGAAGAATCCAAAATTCT+TGG + chr5.1:2861726-2861745 MS.gene21944:intron 30.0%
TTTGGAAATTGAGGAAAGAT+CGG - chr5.1:2863402-2863421 None:intergenic 30.0%
! AATTTGAAATTGAGTGGAAG+AGG + chr5.1:2861791-2861810 MS.gene21944:CDS 30.0%
! ATAGTCTAATTTGCAAAAGG+TGG + chr5.1:2862388-2862407 MS.gene21944:CDS 30.0%
! ATGTTTTCTTCTTCTTACGA+GGG - chr5.1:2862683-2862702 None:intergenic 30.0%
! ATTTGAAATTGAGTGGAAGA+GGG + chr5.1:2861792-2861811 MS.gene21944:CDS 30.0%
! CATCTTTCCATGTTACATTT+TGG - chr5.1:2863320-2863339 None:intergenic 30.0%
! CTGATAGTCTAATTTGCAAA+AGG + chr5.1:2862385-2862404 MS.gene21944:CDS 30.0%
! CTTTTGCAAATTAGACTATC+AGG - chr5.1:2862387-2862406 None:intergenic 30.0%
! GAAAAGTCTTCCAAGAATTT+TGG - chr5.1:2861739-2861758 None:intergenic 30.0%
! GTTAGAACCTGTCATATTTT+TGG + chr5.1:2861154-2861173 MS.gene21944:CDS 30.0%
! TGGACAAATTTGAAATTGAG+TGG + chr5.1:2861785-2861804 MS.gene21944:CDS 30.0%
!! CCTTGATTTGGAAAAAATTG+TGG - chr5.1:2863444-2863463 None:intergenic 30.0%
!! GCAATTTGATTTGGAAATTG+AGG - chr5.1:2863411-2863430 None:intergenic 30.0%
!! TTTGGTCTTCCATTTTAACA+GGG - chr5.1:2863302-2863321 None:intergenic 30.0%
!! TTTTGGTCTTCCATTTTAAC+AGG - chr5.1:2863303-2863322 None:intergenic 30.0%
!!! AAGCCTCTTGTTATTTTTTC+TGG + chr5.1:2861472-2861491 MS.gene21944:intron 30.0%
!!! AGCCTCTTGTTATTTTTTCT+GGG + chr5.1:2861473-2861492 MS.gene21944:intron 30.0%
!!! ATGCGAGAAAACTTTTTTTG+TGG + chr5.1:2861895-2861914 MS.gene21944:CDS 30.0%
!!! CCACAATTTTTTCCAAATCA+AGG + chr5.1:2863441-2863460 MS.gene21944:CDS 30.0%
AAAATGTTCATGTTTCGTCG+AGG + chr5.1:2862471-2862490 MS.gene21944:CDS 35.0%
AAATTGTAGTTCCTCCATGA+TGG - chr5.1:2861504-2861523 None:intergenic 35.0%
AAGACCAATCCATCTGTTAT+TGG + chr5.1:2862627-2862646 MS.gene21944:CDS 35.0%
AAGATCGGAACACTTTGAAT+TGG - chr5.1:2863387-2863406 None:intergenic 35.0%
AAGTTTACCACAACAGAAGA+AGG + chr5.1:2861343-2861362 MS.gene21944:intron 35.0%
AATGAGAGAAGCTATCAAAG+AGG + chr5.1:2861642-2861661 MS.gene21944:intron 35.0%
ACACCCAGATGATTATAAAG+AGG + chr5.1:2862539-2862558 MS.gene21944:CDS 35.0%
ACAGATAAAAACATGCACAC+AGG + chr5.1:2863142-2863161 MS.gene21944:CDS 35.0%
AGAAGAAAACATCCAGGAAA+AGG + chr5.1:2862691-2862710 MS.gene21944:CDS 35.0%
AGACATAAATGGTGAGGATT+TGG + chr5.1:2860664-2860683 MS.gene21944:CDS 35.0%
AGGATTGGAATTTGATTCAG+AGG + chr5.1:2860775-2860794 MS.gene21944:CDS 35.0%
ATACAGGCACAAAGAGTTAA+TGG + chr5.1:2862029-2862048 MS.gene21944:CDS 35.0%
ATACTCACAGTTGTATGATG+AGG - chr5.1:2863552-2863571 None:intergenic 35.0%
ATAGGATCACCAATAACAGA+TGG - chr5.1:2862639-2862658 None:intergenic 35.0%
ATCACCAATAACAGATGGAT+TGG - chr5.1:2862634-2862653 None:intergenic 35.0%
ATTAAACACACCATTACCGT+TGG - chr5.1:2860690-2860709 None:intergenic 35.0%
ATTATAAAGAGGCTATGGAG+GGG + chr5.1:2862550-2862569 MS.gene21944:CDS 35.0%
ATTTATGTCTCCATCGTTTG+CGG - chr5.1:2860654-2860673 None:intergenic 35.0%
CAAAACACTCATAGTCAATC+CGG - chr5.1:2861405-2861424 None:intergenic 35.0%
CAACAGAACTTGAATGTGAT+GGG - chr5.1:2863506-2863525 None:intergenic 35.0%
CAAGAAGATTAGGGAATTGA+CGG + chr5.1:2860739-2860758 MS.gene21944:CDS 35.0%
CACCCAGAAAAAATAACAAG+AGG - chr5.1:2861478-2861497 None:intergenic 35.0%
CATATGAGATGAAGACAATG+TGG + chr5.1:2861860-2861879 MS.gene21944:CDS 35.0%
GATGGAACGATTAGCAAAAA+TGG + chr5.1:2863674-2863693 MS.gene21944:CDS 35.0%
GATTATAAAGAGGCTATGGA+GGG + chr5.1:2862549-2862568 MS.gene21944:CDS 35.0%
GCACAAATAATATGGGAACA+TGG - chr5.1:2862336-2862355 None:intergenic 35.0%
GGATGATGATATAAGAGGAT+TGG + chr5.1:2860760-2860779 MS.gene21944:CDS 35.0%
GTAAGAAGAAGAAAACATCC+AGG + chr5.1:2862685-2862704 MS.gene21944:CDS 35.0%
GTATCATAAACAGCCTAAAG+GGG + chr5.1:2861597-2861616 MS.gene21944:intron 35.0%
GTCTCATGGCACAAATAATA+TGG - chr5.1:2862344-2862363 None:intergenic 35.0%
GTGATTGTAGACAGTTTGAA+CGG + chr5.1:2862301-2862320 MS.gene21944:CDS 35.0%
TACTCACAGTTGTATGATGA+GGG - chr5.1:2863551-2863570 None:intergenic 35.0%
TAGGAACGAAATGAGCATAA+CGG - chr5.1:2861075-2861094 None:intergenic 35.0%
TATTATTTGTGCCATGAGAC+AGG + chr5.1:2862344-2862363 MS.gene21944:CDS 35.0%
TGAAGAAGGAAAAGAGGATA+TGG + chr5.1:2860709-2860728 MS.gene21944:CDS 35.0%
TGATTATAAAGAGGCTATGG+AGG + chr5.1:2862548-2862567 MS.gene21944:CDS 35.0%
TGGAAGACCAAAATGTAACA+TGG + chr5.1:2863310-2863329 MS.gene21944:CDS 35.0%
TGTTGAAAGCAAAAACAGTC+TGG + chr5.1:2861969-2861988 MS.gene21944:CDS 35.0%
TGTTGACAACAAAGTTACAC+AGG + chr5.1:2862082-2862101 MS.gene21944:CDS 35.0%
! AAATCTATGCGGATTGTCAT+GGG + chr5.1:2860819-2860838 MS.gene21944:CDS 35.0%
! CATGGAGGAACTACAATTTT+TGG + chr5.1:2861505-2861524 MS.gene21944:intron 35.0%
! CATTCAAGTTCTGTTGGATA+TGG + chr5.1:2863510-2863529 MS.gene21944:CDS 35.0%
! GATGTTTTCTTCTTCTTACG+AGG - chr5.1:2862684-2862703 None:intergenic 35.0%
! GATTGACTATGAGTGTTTTG+GGG + chr5.1:2861405-2861424 MS.gene21944:intron 35.0%
! GGATTGACTATGAGTGTTTT+GGG + chr5.1:2861404-2861423 MS.gene21944:intron 35.0%
! GTAATCATCCTTTGCTGATT+TGG - chr5.1:2862415-2862434 None:intergenic 35.0%
! TGTAACTTTGTTGTCAACAC+AGG - chr5.1:2862081-2862100 None:intergenic 35.0%
! TGTTTTCTTCTTCTTACGAG+GGG - chr5.1:2862682-2862701 None:intergenic 35.0%
! TTGACGGATGATGATATAAG+AGG + chr5.1:2860755-2860774 MS.gene21944:CDS 35.0%
!! TTGGTCTTCCATTTTAACAG+GGG - chr5.1:2863301-2863320 None:intergenic 35.0%
AAACACGTGAGACATACAAG+TGG + chr5.1:2861548-2861567 MS.gene21944:intron 40.0%
AAAGGAGGTCATGAGAGTTT+GGG + chr5.1:2861193-2861212 MS.gene21944:CDS 40.0%
AAAGGCAAGAATAGAAGGTG+GGG + chr5.1:2861258-2861277 MS.gene21944:intron 40.0%
AACTCTCGAATCACAAGCAA+TGG + chr5.1:2863727-2863746 MS.gene21944:CDS 40.0%
AATGTCCAGAGTCAAGATCA+AGG + chr5.1:2863258-2863277 MS.gene21944:intron 40.0%
ACTTTGAATTGGAACACCGT+TGG - chr5.1:2863376-2863395 None:intergenic 40.0%
AGGAACGAAATGAGCATAAC+GGG - chr5.1:2861074-2861093 None:intergenic 40.0%
AGTTAACTCATGGTTGTGTG+AGG - chr5.1:2861047-2861066 None:intergenic 40.0%
CAAAGACGATGCAAAGAGTT+TGG - chr5.1:2861673-2861692 None:intergenic 40.0%
CCAACAGAACTTGAATGTGA+TGG - chr5.1:2863507-2863526 None:intergenic 40.0%
CTTTGCATCGTCTTTGTTCA+TGG + chr5.1:2861677-2861696 MS.gene21944:intron 40.0%
GAAAGGCAAGAATAGAAGGT+GGG + chr5.1:2861257-2861276 MS.gene21944:intron 40.0%
GAAGGAAAGGCAAGAATAGA+AGG + chr5.1:2861253-2861272 MS.gene21944:CDS 40.0%
GCAAACGATGGAGACATAAA+TGG + chr5.1:2860653-2860672 MS.gene21944:CDS 40.0%
GTTAACTCATGGTTGTGTGA+GGG - chr5.1:2861046-2861065 None:intergenic 40.0%
TAAACGTCCTTCTTCTGTTG+TGG - chr5.1:2861353-2861372 None:intergenic 40.0%
TCACTCAATTGACGGTTCTT+AGG - chr5.1:2861094-2861113 None:intergenic 40.0%
TCTGACCATGACAAAAACGT+TGG + chr5.1:2862822-2862841 MS.gene21944:CDS 40.0%
TCTGATAAAGCCCTTGTTGA+TGG + chr5.1:2861115-2861134 MS.gene21944:CDS 40.0%
TGACAAAAACGTTGGATGTG+AGG + chr5.1:2862830-2862849 MS.gene21944:CDS 40.0%
TGATAACCCCCCTGTTAAAA+TGG + chr5.1:2863290-2863309 MS.gene21944:CDS 40.0%
TGCAGAACACTTAGTTCGAA+TGG - chr5.1:2860966-2860985 None:intergenic 40.0%
TGTAGACAGTTTGAACGGAT+TGG + chr5.1:2862306-2862325 MS.gene21944:CDS 40.0%
TTCGAACTAAGTGTTCTGCA+AGG + chr5.1:2860966-2860985 MS.gene21944:CDS 40.0%
TTGCATTTGACGCAACATAC+AGG + chr5.1:2861434-2861453 MS.gene21944:intron 40.0%
TTGCTTGTGATTCGAGAGTT+TGG - chr5.1:2863727-2863746 None:intergenic 40.0%
! AGAACAATGTCTCCTTTTCC+TGG - chr5.1:2862706-2862725 None:intergenic 40.0%
! AGTCTGGTTGATTTCATGCA+TGG + chr5.1:2861985-2862004 MS.gene21944:CDS 40.0%
! CACATCCAACGTTTTTGTCA+TGG - chr5.1:2862830-2862849 None:intergenic 40.0%
! CCATCACATTCAAGTTCTGT+TGG + chr5.1:2863504-2863523 MS.gene21944:CDS 40.0%
! CGGATTGACTATGAGTGTTT+TGG + chr5.1:2861403-2861422 MS.gene21944:intron 40.0%
! GAAATCTATGCGGATTGTCA+TGG + chr5.1:2860818-2860837 MS.gene21944:CDS 40.0%
! GTGTTGATAAGAGTTGTGAC+AGG + chr5.1:2862939-2862958 MS.gene21944:CDS 40.0%
! TTTTCTGGGTGTAACCATCA+TGG + chr5.1:2861487-2861506 MS.gene21944:intron 40.0%
!! AATTATTTTACCGGCGCCAA+CGG + chr5.1:2863357-2863376 MS.gene21944:CDS 40.0%
!! ATGAGAGTTTGGGATTTTGC+AGG + chr5.1:2861203-2861222 MS.gene21944:CDS 40.0%
!! GTTTTTGAGCAGTCTAGTCT+CGG + chr5.1:2862189-2862208 MS.gene21944:CDS 40.0%
!! TGGTCTTCCATTTTAACAGG+GGG - chr5.1:2863300-2863319 None:intergenic 40.0%
!! TTGGCGCCGGTAAAATAATT+AGG - chr5.1:2863357-2863376 None:intergenic 40.0%
AAGGTGGACCAAATCAGCAA+AGG + chr5.1:2862404-2862423 MS.gene21944:CDS 45.0%
AATCATGTGCTCCTGTCTCA+TGG - chr5.1:2862358-2862377 None:intergenic 45.0%
AATGGTGAGGATTTGGCCAA+CGG + chr5.1:2860671-2860690 MS.gene21944:CDS 45.0%
AGAACTACATCCAGGTGTGA+AGG + chr5.1:2861922-2861941 MS.gene21944:CDS 45.0%
AGTTGTCTGCTCGTGGAAAT+TGG - chr5.1:2863482-2863501 None:intergenic 45.0%
CAAAACTGTCCAGAACTAGC+TGG + chr5.1:2862753-2862772 MS.gene21944:CDS 45.0%
CAACACCTTGATCTTGACTC+TGG - chr5.1:2863266-2863285 None:intergenic 45.0%
CCATCAGTAACTACCCCTTT+AGG - chr5.1:2861613-2861632 None:intergenic 45.0%
CCTAAAGGGGTAGTTACTGA+TGG + chr5.1:2861610-2861629 MS.gene21944:intron 45.0%
CGATGGAGACATAAATGGTG+AGG + chr5.1:2860658-2860677 MS.gene21944:CDS 45.0%
GAAAGGAGGTCATGAGAGTT+TGG + chr5.1:2861192-2861211 MS.gene21944:CDS 45.0%
GGAAAGGCAAGAATAGAAGG+TGG + chr5.1:2861256-2861275 MS.gene21944:intron 45.0%
GTGGCATAAGAACTACATCC+AGG + chr5.1:2861914-2861933 MS.gene21944:CDS 45.0%
GTTGTCTGCTCGTGGAAATT+GGG - chr5.1:2863481-2863500 None:intergenic 45.0%
TGCTAATCGTTCCATCTCCA+AGG - chr5.1:2863670-2863689 None:intergenic 45.0%
TGCTGCGTTGAGTTATTTGC+AGG + chr5.1:2861288-2861307 MS.gene21944:intron 45.0%
TGGTGATCCTATCAAAGCCA+AGG + chr5.1:2862647-2862666 MS.gene21944:CDS 45.0%
TTGTCTGCTCGTGGAAATTG+GGG - chr5.1:2863480-2863499 None:intergenic 45.0%
!! AACGGGTTGGAGTTAACTCA+TGG - chr5.1:2861057-2861076 None:intergenic 45.0%
!! ACGAAATGAGCATAACGGGT+TGG - chr5.1:2861070-2861089 None:intergenic 45.0%
!! ATGTTAGTTTGTGGGTGCCT+TGG + chr5.1:2863650-2863669 MS.gene21944:intron 45.0%
!! GAGTTTGGGATTTTGCAGGA+AGG + chr5.1:2861207-2861226 MS.gene21944:CDS 45.0%
!! GGTCTTCCATTTTAACAGGG+GGG - chr5.1:2863299-2863318 None:intergenic 45.0%
!! TTTATGCTGGCTCAGAAAGG+AGG + chr5.1:2861178-2861197 MS.gene21944:CDS 45.0%
!!! CTATGAGTGTTTTGGGGATG+TGG + chr5.1:2861411-2861430 MS.gene21944:intron 45.0%
!!! GGTTTTATGCTGGCTCAGAA+AGG + chr5.1:2861175-2861194 MS.gene21944:CDS 45.0%
ACACTCATAGTCAATCCGGC+TGG - chr5.1:2861401-2861420 None:intergenic 50.0%
ACATCACGTCCAGCTAGTTC+TGG - chr5.1:2862765-2862784 None:intergenic 50.0%
CCTATCAAAGCCAAGGCCAA+AGG + chr5.1:2862654-2862673 MS.gene21944:CDS 50.0%
CGAGTTTATGCCTTCACACC+TGG - chr5.1:2861935-2861954 None:intergenic 50.0%
GAGGATTTGGCCAACGGTAA+TGG + chr5.1:2860677-2860696 MS.gene21944:CDS 50.0%
TCTGGGTGTAACCATCATGG+AGG + chr5.1:2861490-2861509 MS.gene21944:intron 50.0%
TGCGTGAAGGCCATCAACAA+GGG - chr5.1:2861128-2861147 None:intergenic 50.0%
TGTCTGCTCGTGGAAATTGG+GGG - chr5.1:2863479-2863498 None:intergenic 50.0%
TTCTAACACCGTGTGCGTGA+AGG - chr5.1:2861141-2861160 None:intergenic 50.0%
TTTGGTCGGATTCAACCAGC+CGG + chr5.1:2861383-2861402 MS.gene21944:intron 50.0%
! TGCGGATTGTCATGGGTTTG+TGG + chr5.1:2860826-2860845 MS.gene21944:CDS 50.0%
!! ATAAAGAGGCGTCGTGAGAG+TGG + chr5.1:2862594-2862613 MS.gene21944:CDS 50.0%
!! CCTTTGGCCTTGGCTTTGAT+AGG - chr5.1:2862657-2862676 None:intergenic 50.0%
AATTGGAACACCGTTGGCGC+CGG - chr5.1:2863370-2863389 None:intergenic 55.0%
GATGGGAAGTTGTCTGCTCG+TGG - chr5.1:2863489-2863508 None:intergenic 55.0%
GTGCGTGAAGGCCATCAACA+AGG - chr5.1:2861129-2861148 None:intergenic 55.0%
GTTTGTGGGTGCCTTGGAGA+TGG + chr5.1:2863656-2863675 MS.gene21944:intron 55.0%
!! CTTCTTACGAGGGGCACCTT+TGG - chr5.1:2862673-2862692 None:intergenic 55.0%
!! GTTGATGGCCTTCACGCACA+CGG + chr5.1:2861130-2861149 MS.gene21944:CDS 55.0%
!! ACGAGGGGCACCTTTGGCCT+TGG - chr5.1:2862667-2862686 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 2860647 2863767 2860647 ID=MS.gene21944
chr5.1 mRNA 2860647 2863767 2860647 ID=MS.gene21944.t1;Parent=MS.gene21944
chr5.1 exon 2860647 2861274 2860647 ID=MS.gene21944.t1.exon1;Parent=MS.gene21944.t1
chr5.1 CDS 2860647 2861274 2860647 ID=cds.MS.gene21944.t1;Parent=MS.gene21944.t1
chr5.1 exon 2861752 2862851 2861752 ID=MS.gene21944.t1.exon2;Parent=MS.gene21944.t1
chr5.1 CDS 2861752 2862851 2861752 ID=cds.MS.gene21944.t1;Parent=MS.gene21944.t1
chr5.1 exon 2862938 2863030 2862938 ID=MS.gene21944.t1.exon3;Parent=MS.gene21944.t1
chr5.1 CDS 2862938 2863030 2862938 ID=cds.MS.gene21944.t1;Parent=MS.gene21944.t1
chr5.1 exon 2863103 2863174 2863103 ID=MS.gene21944.t1.exon4;Parent=MS.gene21944.t1
chr5.1 CDS 2863103 2863174 2863103 ID=cds.MS.gene21944.t1;Parent=MS.gene21944.t1
chr5.1 exon 2863267 2863563 2863267 ID=MS.gene21944.t1.exon5;Parent=MS.gene21944.t1
chr5.1 CDS 2863267 2863563 2863267 ID=cds.MS.gene21944.t1;Parent=MS.gene21944.t1
chr5.1 exon 2863657 2863767 2863657 ID=MS.gene21944.t1.exon6;Parent=MS.gene21944.t1
chr5.1 CDS 2863657 2863767 2863657 ID=cds.MS.gene21944.t1;Parent=MS.gene21944.t1
Gene Sequence

>MS.gene21944

ATGGCCGCAAACGATGGAGACATAAATGGTGAGGATTTGGCCAACGGTAATGGTGTGTTTAATGAAGAAGGAAAAGAGGATATGGATACTTACAAGAAGATTAGGGAATTGACGGATGATGATATAAGAGGATTGGAATTTGATTCAGAGGAAAAAGCGACACAATTTTATGAAATCTATGCGGATTGTCATGGGTTTGTGGTAAGAAAAGATGATGTAAACAAAGATGATGATGGGAATATAATTGCACGTCGATTAGTATGTAATAGAGAGGGTGAGAATAAAAATAAGAAACAAAGTACATATTCGAGGCAGACCATTCGAACTAAGTGTTCTGCAAGGATTCGAGTAGTTTTAAATGTTGATACTAATAAATGGAGAGTTTCTGGATTCGAGCCCTCACACAACCATGAGTTAACTCCAACCCGTTATGCTCATTTCGTTCCTAAGAACCGTCAATTGAGTGAATCTGATAAAGCCCTTGTTGATGGCCTTCACGCACACGGTGTTAGAACCTGTCATATTTTTGGTTTTATGCTGGCTCAGAAAGGAGGTCATGAGAGTTTGGGATTTTGCAGGAAGGACTTATATAACTACTTATACAATGAAGGAAAGGCAAGAATAGAAGGTGGGGATTCTTTTGCTGCGTTGAGTTATTTGCAGGCTAAAGCTGATCATGATCCAATGTTCTTTTCAAAGTTTACCACAACAGAAGAAGGACGTTTAGAAAATTTATTTTGGTCGGATTCAACCAGCCGGATTGACTATGAGTGTTTTGGGGATGTGGTTGCATTTGACGCAACATACAGGAAGAATAGATATGACAAGCCTCTTGTTATTTTTTCTGGGTGTAACCATCATGGAGGAACTACAATTTTTGGTTGTGCTTTAGTTTCTAATGAAACACGTGAGACATACAAGTGGCTTTTAAATACATTTTTAGAAGCAATGTATCATAAACAGCCTAAAGGGGTAGTTACTGATGGAGATCTTTCAATGAGAGAAGCTATCAAAGAGGTATTTCCAAACTCTTTGCATCGTCTTTGTTCATGGCATTTTCATCGAAACGCTGAAGAGAATGTGAAGAATCCAAAATTCTTGGAAGACTTTTCCTCATTGATTTATGCTAATTATACCGTGGACAAATTTGAAATTGAGTGGAAGAGGGTCATTGATGATTACAATTTATCACACAATACATGGGTTAAAAAAGCATATGAGATGAAGACAATGTGGGCGAGTGCATACATGCGAGAAAACTTTTTTTGTGGCATAAGAACTACATCCAGGTGTGAAGGCATAAACTCGTTTATAAATATGTATGTTGAAAGCAAAAACAGTCTGGTTGATTTCATGCATGGTTTTAATAGAGCTGTAAAAGAATACAGGCACAAAGAGTTAATGGCAGATTTTAATACGTTCTATTACAAACCTGTGTTGACAACAAAGTTACACAGGTTTGAGCTTGAAGCTTCAAAAATCTTTACGAGGATAAAATTTTATGAAGTTCAAAATGAAATAGAAGATGCAATCACATTAAATGTTTTTGAGCAGTCTAGTCTCGGAAAGACTGTGAAGTTTAAGATGAATAGATTTGGCAACAAAGATTCTACGTATCTAGTTTATCTTGATACGGAACAAAGTAAATTTTTATGTGATTGTAGACAGTTTGAACGGATTGGAATTCCATGTTCCCATATTATTTGTGCCATGAGACAGGAGCACATGATTGAGTTTCCTGATAGTCTAATTTGCAAAAGGTGGACCAAATCAGCAAAGGATGATTACATATCGTCTATGTCTTCTAAAGAATGCGATGATGAAAAAATGTTCATGTTTCGTCGAGGAACTATGTCTACTGCATTGAATAATCTATATGACATTTCTTGTAAACACCCAGATGATTATAAAGAGGCTATGGAGGGGATTTACAATTTGTGTGAGAAAATAAAGAGGCGTCGTGAGAGTGGTGAAAAATATAAGACCAATCCATCTGTTATTGGTGATCCTATCAAAGCCAAGGCCAAAGGTGCCCCTCGTAAGAAGAAGAAAACATCCAGGAAAAGGAGACATTGTTCTCTCTGCAAAAATATTGCTCACACGAAGCAAAACTGTCCAGAACTAGCTGGACGTGATGTTCTAAATGAAGTCAATGAAGAGGACTATTCTCGTCGATCTGACCATGACAAAAACGTTGGATGTGAGGTATTTTTACACCATCGTGTTAAATGTGTTTTTGTTTGTAAATGTTTGTGTTATTTATTCAATATAATTATAATTTGTTTGCACAGGGTGTTGATAAGAGTTGTGACAGGAAGCGTAAGAGAAAAGTTGTCAATGTTACTTCAATGCAAGAAGATATCAATAAAAGAATATCAAAACAGGTAATTGAAGATACTTGATACTTTTTGTGGAAATTTATTAAGTGTTTGACAATTTTTATAATGTTGTACTAGATTGAAAATGAAGGGATTGGTCGACCTAATGAAAACATGACAGATAAAAACATGCACACAGGATTTGACAACGTAAGTAGTTTCTCATAGTTAATTGGAGCAGATTTCAGTACTTTGATATTTTATTGCTGATGTTTTGATTTGTTTCAAAACAAAATGTCCAGAGTCAAGATCAAGGTGTTGTACATGATAACCCCCCTGTTAAAATGGAAGACCAAAATGTAACATGGAAAGATGGTTCAATGTATGTTCCTAATTATTTTACCGGCGCCAACGGTGTTCCAATTCAAAGTGTTCCGATCTTTCCTCAATTTCCAAATCAAATTGCATCTACTTTTCCACAATTTTTTCCAAATCAAGGTGCATCAATTTTCCCCCAATTTCCACGAGCAGACAACTTCCCATCACATTCAAGTTCTGTTGGATATGGCAGAGCACATAATGTCCCTCATCATACAACTGTGAGTATACACAACATTCATATTACTAATTATGTGAATTTATGCTGTCAAATATGTTTTCTCTCTCTAATATGTATTCTCTATTTATGTTAGTTTGTGGGTGCCTTGGAGATGGAACGATTAGCAAAAATGGATAAGAATATATGTGGAAATGAAGATTCCAAACTCTCGAATCACAAGCAATGGAACAAGCATCGAAAGTGA
Protein sequence

>MS.gene21944.t1

MAANDGDINGEDLANGNGVFNEEGKEDMDTYKKIRELTDDDIRGLEFDSEEKATQFYEIYADCHGFVVRKDDVNKDDDGNIIARRLVCNREGENKNKKQSTYSRQTIRTKCSARIRVVLNVDTNKWRVSGFEPSHNHELTPTRYAHFVPKNRQLSESDKALVDGLHAHGVRTCHIFGFMLAQKGGHESLGFCRKDLYNYLYNEGKARIEDFSSLIYANYTVDKFEIEWKRVIDDYNLSHNTWVKKAYEMKTMWASAYMRENFFCGIRTTSRCEGINSFINMYVESKNSLVDFMHGFNRAVKEYRHKELMADFNTFYYKPVLTTKLHRFELEASKIFTRIKFYEVQNEIEDAITLNVFEQSSLGKTVKFKMNRFGNKDSTYLVYLDTEQSKFLCDCRQFERIGIPCSHIICAMRQEHMIEFPDSLICKRWTKSAKDDYISSMSSKECDDEKMFMFRRGTMSTALNNLYDISCKHPDDYKEAMEGIYNLCEKIKRRRESGEKYKTNPSVIGDPIKAKAKGAPRKKKKTSRKRRHCSLCKNIAHTKQNCPELAGRDVLNEVNEEDYSRRSDHDKNVGCEGVDKSCDRKRKRKVVNVTSMQEDINKRISKQIENEGIGRPNENMTDKNMHTGFDNSQDQGVVHDNPPVKMEDQNVTWKDGSMYVPNYFTGANGVPIQSVPIFPQFPNQIASTFPQFFPNQGASIFPQFPRADNFPSHSSSVGYGRAHNVPHHTTFVGALEMERLAKMDKNICGNEDSKLSNHKQWNKHRK