Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21976.t1 | AES88798.2 | 81.1 | 106 | 20 | 0 | 1 | 106 | 147 | 252 | 1.40E-43 | 187.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21976.t1 | G7JTM9 | 81.1 | 106 | 20 | 0 | 1 | 106 | 147 | 252 | 1.0e-43 | 187.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene21976.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21976.t1 | MTR_4g062370 | 81.132 | 106 | 20 | 0 | 1 | 106 | 147 | 252 | 3.58e-53 | 187 |
| MS.gene21976.t1 | MTR_4g032560 | 48.276 | 116 | 60 | 0 | 1 | 116 | 172 | 287 | 3.66e-33 | 125 |
| MS.gene21976.t1 | MTR_4g032560 | 28.205 | 234 | 121 | 2 | 176 | 365 | 66 | 296 | 5.03e-25 | 103 |
| MS.gene21976.t1 | MTR_4g032580 | 47.414 | 116 | 61 | 0 | 1 | 116 | 172 | 287 | 3.36e-32 | 123 |
| MS.gene21976.t1 | MTR_4g032580 | 28.205 | 234 | 121 | 2 | 176 | 365 | 66 | 296 | 5.23e-25 | 103 |
| MS.gene21976.t1 | MTR_1g019580 | 51.695 | 118 | 57 | 0 | 1 | 118 | 1 | 118 | 5.30e-32 | 117 |
| MS.gene21976.t1 | MTR_1g019580 | 28.302 | 106 | 76 | 0 | 260 | 365 | 20 | 125 | 7.82e-12 | 62.8 |
| MS.gene21976.t1 | MTR_1g047540 | 43.846 | 130 | 71 | 1 | 1 | 128 | 128 | 257 | 9.42e-32 | 125 |
| MS.gene21976.t1 | MTR_1g047540 | 28.767 | 219 | 124 | 3 | 176 | 365 | 37 | 252 | 7.80e-20 | 91.3 |
| MS.gene21976.t1 | MTR_1g105780 | 50.000 | 118 | 59 | 0 | 1 | 118 | 144 | 261 | 2.15e-31 | 120 |
| MS.gene21976.t1 | MTR_1g105780 | 24.681 | 235 | 130 | 2 | 175 | 365 | 37 | 268 | 1.09e-22 | 96.7 |
| MS.gene21976.t1 | MTR_1g105765 | 50.000 | 118 | 59 | 0 | 1 | 118 | 144 | 261 | 2.18e-31 | 120 |
| MS.gene21976.t1 | MTR_1g105765 | 25.106 | 235 | 129 | 2 | 175 | 365 | 37 | 268 | 6.69e-23 | 97.1 |
| MS.gene21976.t1 | MTR_5g094740 | 48.092 | 131 | 61 | 3 | 1 | 129 | 695 | 820 | 2.61e-31 | 125 |
| MS.gene21976.t1 | MTR_3g452180 | 41.379 | 116 | 68 | 0 | 1 | 116 | 59 | 174 | 1.71e-29 | 112 |
| MS.gene21976.t1 | MTR_3g452180 | 29.412 | 102 | 72 | 0 | 264 | 365 | 82 | 183 | 7.38e-11 | 61.2 |
| MS.gene21976.t1 | MTR_1g069260 | 41.538 | 130 | 64 | 1 | 1 | 118 | 148 | 277 | 5.42e-29 | 114 |
| MS.gene21976.t1 | MTR_1g069260 | 24.579 | 297 | 156 | 7 | 114 | 368 | 17 | 287 | 4.42e-18 | 84.0 |
| MS.gene21976.t1 | MTR_7g110090 | 40.171 | 117 | 70 | 0 | 1 | 117 | 143 | 259 | 2.41e-27 | 109 |
| MS.gene21976.t1 | MTR_7g110090 | 24.786 | 234 | 129 | 2 | 176 | 365 | 37 | 267 | 1.66e-19 | 87.8 |
| MS.gene21976.t1 | MTR_8g074190 | 71.212 | 66 | 15 | 1 | 139 | 200 | 1 | 66 | 4.11e-23 | 92.0 |
| MS.gene21976.t1 | MTR_1g084880 | 26.531 | 245 | 128 | 3 | 175 | 370 | 36 | 277 | 1.96e-21 | 93.2 |
| MS.gene21976.t1 | MTR_1g084880 | 36.585 | 123 | 69 | 3 | 1 | 116 | 143 | 263 | 3.34e-14 | 72.4 |
| MS.gene21976.t1 | MTR_3g048970 | 26.531 | 245 | 128 | 3 | 175 | 370 | 36 | 277 | 2.61e-21 | 92.8 |
| MS.gene21976.t1 | MTR_3g048970 | 36.585 | 123 | 69 | 3 | 1 | 116 | 143 | 263 | 3.85e-14 | 72.4 |
| MS.gene21976.t1 | MTR_5g066660 | 31.308 | 214 | 121 | 4 | 175 | 368 | 36 | 243 | 2.76e-20 | 90.1 |
| MS.gene21976.t1 | MTR_3g070250 | 26.141 | 241 | 126 | 3 | 175 | 366 | 41 | 278 | 6.27e-20 | 89.0 |
| MS.gene21976.t1 | MTR_3g070250 | 33.333 | 123 | 77 | 1 | 1 | 118 | 148 | 270 | 1.02e-14 | 74.3 |
| MS.gene21976.t1 | MTR_1g087870 | 33.613 | 119 | 74 | 1 | 1 | 114 | 91 | 209 | 2.39e-18 | 84.0 |
| MS.gene21976.t1 | MTR_4g121040 | 36.842 | 114 | 72 | 0 | 1 | 114 | 47 | 160 | 1.02e-17 | 80.9 |
| MS.gene21976.t1 | MTR_2g038740 | 28.182 | 220 | 106 | 3 | 175 | 345 | 36 | 252 | 1.70e-16 | 81.3 |
| MS.gene21976.t1 | MTR_4g117740 | 32.374 | 139 | 79 | 1 | 191 | 314 | 60 | 198 | 2.03e-16 | 77.4 |
| MS.gene21976.t1 | MTR_4g117740 | 50.000 | 58 | 29 | 0 | 18 | 75 | 142 | 199 | 1.07e-12 | 66.6 |
| MS.gene21976.t1 | MTR_8g042540 | 50.000 | 70 | 35 | 0 | 49 | 118 | 6 | 75 | 3.64e-16 | 73.6 |
| MS.gene21976.t1 | MTR_8g042540 | 50.000 | 70 | 35 | 0 | 49 | 118 | 18 | 87 | 5.99e-16 | 73.2 |
| MS.gene21976.t1 | MTR_0152s0060 | 46.429 | 84 | 45 | 0 | 35 | 118 | 228 | 311 | 9.36e-15 | 75.5 |
| MS.gene21976.t1 | MTR_2g016390 | 34.043 | 94 | 62 | 0 | 22 | 115 | 602 | 695 | 2.95e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 86 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAGTCCTTGGTATTTAT+TGG | 0.197880 | 3.3:+41216316 | None:intergenic |
| ACAACATTGAACAGAGTAAT+AGG | 0.238369 | 3.3:+41219866 | None:intergenic |
| AAACTAAAATTGAAGTTATC+AGG | 0.253905 | 3.3:+41216518 | None:intergenic |
| GATACAATTGGTTCTGAGTT+AGG | 0.256142 | 3.3:-41218009 | MS.gene21976:CDS |
| ACTTTCATATGACCCTGTTT+TGG | 0.315266 | 3.3:-41216350 | MS.gene21976:CDS |
| AGAGGTATTGGTTGAGAGAA+AGG | 0.340490 | 3.3:-41217947 | MS.gene21976:CDS |
| GGCATAACAGATTCCAAAAC+AGG | 0.341760 | 3.3:+41216337 | None:intergenic |
| GTACAGATTCTGTATTATCT+TGG | 0.348016 | 3.3:-41219673 | MS.gene21976:intron |
| TTAAGCCGCAATGTGATTGC+GGG | 0.384335 | 3.3:-41216193 | MS.gene21976:CDS |
| CCTCATTGCCCGGCACAAAC+TGG | 0.389495 | 3.3:+41219569 | None:intergenic |
| CGAGGCAGCAAAAGGTTATC+TGG | 0.393945 | 3.3:-41216474 | MS.gene21976:intron |
| TGGATTTGCTCAGATGTGTT+TGG | 0.402220 | 3.3:-41219653 | MS.gene21976:CDS |
| CTCGTCAACACTTAACCATT+TGG | 0.422906 | 3.3:+41216493 | None:intergenic |
| TTATAATGAGATAGAGGTAT+TGG | 0.426836 | 3.3:-41217959 | MS.gene21976:CDS |
| GCAGCTGATGTTGATTGGTT+GGG | 0.428655 | 3.3:-41218224 | MS.gene21976:intron |
| ATACAATTGGTTCTGAGTTA+GGG | 0.448544 | 3.3:-41218008 | MS.gene21976:CDS |
| CAGATGACACGGGCCACGTC+TGG | 0.463322 | 3.3:-41216288 | MS.gene21976:CDS |
| CGCAGCTGATGTTGATTGGT+TGG | 0.470953 | 3.3:-41218225 | MS.gene21976:intron |
| TGGTTGATGAGCATGGAAAT+AGG | 0.477603 | 3.3:-41219606 | MS.gene21976:CDS |
| AATGAGGCTCACTTTAAGAT+AGG | 0.480282 | 3.3:-41219553 | MS.gene21976:CDS |
| TTAAGCTCGTCATGCACAAA+TGG | 0.483498 | 3.3:+41219836 | None:intergenic |
| ATGCACTCTCCAGTTTGTGC+CGG | 0.484757 | 3.3:-41219578 | MS.gene21976:CDS |
| GTCTCATTTGAACCAACTCC+AGG | 0.485486 | 3.3:+41219463 | None:intergenic |
| CGAACCACACATATCTGCTT+GGG | 0.488465 | 3.3:+41218131 | None:intergenic |
| TGGTTAATGTGCAGCCGTCT+CGG | 0.490790 | 3.3:-41217846 | MS.gene21976:intron |
| GAGAGTATGTTTGCGATGGC+TGG | 0.493354 | 3.3:-41218188 | MS.gene21976:CDS |
| ACCTCTATCTCATTATAAGC+AGG | 0.494280 | 3.3:+41217964 | None:intergenic |
| TGCACTCTCCAGTTTGTGCC+GGG | 0.495828 | 3.3:-41219577 | MS.gene21976:CDS |
| TCTGCATTGTACAGTCTAAG+AGG | 0.497821 | 3.3:-41218346 | MS.gene21976:intron |
| TAATCGCAGCTGATGTTGAT+TGG | 0.503395 | 3.3:-41218229 | MS.gene21976:intron |
| ATGTCGAAAGCCATTGATAG+AGG | 0.503796 | 3.3:+41218385 | None:intergenic |
| TTCTGAGTTAGGGAGATTTG+TGG | 0.506381 | 3.3:-41217998 | MS.gene21976:CDS |
| GAACCGCACTACAAAATTGA+AGG | 0.508709 | 3.3:-41216235 | MS.gene21976:CDS |
| CAACATTGAACAGAGTAATA+GGG | 0.509421 | 3.3:+41219867 | None:intergenic |
| AGTGTTGACGAGGCAGCAAA+AGG | 0.509439 | 3.3:-41216482 | MS.gene21976:CDS |
| ACTTTAAGATAGGTGGTGGT+TGG | 0.509654 | 3.3:-41219543 | MS.gene21976:CDS |
| GCGGGGTCATTCATCAGAAT+CGG | 0.513413 | 3.3:-41216175 | MS.gene21976:CDS |
| TCCTGCTTATAATGAGATAG+AGG | 0.515008 | 3.3:-41217965 | MS.gene21976:CDS |
| TTTAAGCCGCAATGTGATTG+CGG | 0.516214 | 3.3:-41216194 | MS.gene21976:CDS |
| CCAGTTTGTGCCGGGCAATG+AGG | 0.520830 | 3.3:-41219569 | MS.gene21976:CDS |
| ACGAACCACACATATCTGCT+TGG | 0.522643 | 3.3:+41218130 | None:intergenic |
| TTAAAGTGAGCCTCATTGCC+CGG | 0.523371 | 3.3:+41219559 | None:intergenic |
| TATTCTGATGAGATGAATGA+TGG | 0.529840 | 3.3:-41219785 | MS.gene21976:CDS |
| TTCAACACACATACGAGAAG+AGG | 0.530049 | 3.3:-41219811 | MS.gene21976:CDS |
| ACTACAAAATTGAAGGTGAA+TGG | 0.531926 | 3.3:-41216228 | MS.gene21976:CDS |
| TTGCGATGGCTGGACTGAAA+TGG | 0.532753 | 3.3:-41218178 | MS.gene21976:CDS |
| GGGATTAAACTCAACGATGA+AGG | 0.534682 | 3.3:+41218151 | None:intergenic |
| AGAATCGGTGCACCGAGTGT+TGG | 0.535004 | 3.3:-41216160 | MS.gene21976:CDS |
| GTGCTCTACGGCTTGAAGAA+TGG | 0.543766 | 3.3:-41217883 | MS.gene21976:CDS |
| ATCTGTCAAATAGAAGTCCT+TGG | 0.544786 | 3.3:+41216306 | None:intergenic |
| CAGCTGATGTTGATTGGTTG+GGG | 0.547368 | 3.3:-41218223 | MS.gene21976:CDS |
| CTTTGGAACGAACAAAAGCA+TGG | 0.547977 | 3.3:+41216257 | None:intergenic |
| AAGTTCTGTTGCTCTGAAGT+TGG | 0.554304 | 3.3:-41219626 | MS.gene21976:CDS |
| GCTCACTTTAAGATAGGTGG+TGG | 0.559544 | 3.3:-41219547 | MS.gene21976:CDS |
| AACTAAAATTGAAGTTATCA+GGG | 0.566319 | 3.3:+41216519 | None:intergenic |
| TCGTCATGCACAAATGGAGC+AGG | 0.569381 | 3.3:+41219842 | None:intergenic |
| AATGAACTCAATGTGCTCTA+CGG | 0.571963 | 3.3:-41217895 | MS.gene21976:CDS |
| ATTGAGATAAAGAACAACAT+AGG | 0.572790 | 3.3:+41219258 | None:intergenic |
| CTTCTATTTGACAGATGACA+CGG | 0.573224 | 3.3:-41216299 | MS.gene21976:CDS |
| CTACAAACTCTAAAATTGCA+AGG | 0.573290 | 3.3:+41216114 | None:intergenic |
| TCTCATTTGAACCAACTCCA+GGG | 0.574158 | 3.3:+41219464 | None:intergenic |
| CATGGGTGCAACGCCAGACG+TGG | 0.579413 | 3.3:+41216275 | None:intergenic |
| TGAGATGAATGATGGAGTCT+TGG | 0.580950 | 3.3:-41219777 | MS.gene21976:intron |
| CTGAAGTTGGTTGATGAGCA+TGG | 0.582601 | 3.3:-41219613 | MS.gene21976:CDS |
| GAATGGTGGTGCGGTAACAT+TGG | 0.599612 | 3.3:-41217866 | MS.gene21976:CDS |
| AAGGCTAGAGGACTTGAAGC+GGG | 0.603437 | 3.3:-41219508 | MS.gene21976:CDS |
| TTTGGAACGAACAAAAGCAT+GGG | 0.605330 | 3.3:+41216258 | None:intergenic |
| AACACAATGGTCAAGGCTAG+AGG | 0.623217 | 3.3:-41219520 | MS.gene21976:CDS |
| TGTTATGCCAATAAATACCA+AGG | 0.633118 | 3.3:-41216323 | MS.gene21976:CDS |
| CTCATTTGAACCAACTCCAG+GGG | 0.634306 | 3.3:+41219465 | None:intergenic |
| CAAGGCTAGAGGACTTGAAG+CGG | 0.635124 | 3.3:-41219509 | MS.gene21976:CDS |
| CAAATGGTTAAGTGTTGACG+AGG | 0.635515 | 3.3:-41216492 | MS.gene21976:CDS |
| GAAATATTAGCTCCAACACT+CGG | 0.635910 | 3.3:+41216148 | None:intergenic |
| TGGTTGGAACACAATGGTCA+AGG | 0.638321 | 3.3:-41219527 | MS.gene21976:CDS |
| GAGGCTCACTTTAAGATAGG+TGG | 0.645556 | 3.3:-41219550 | MS.gene21976:CDS |
| CTCTACGGCTTGAAGAATGG+TGG | 0.645651 | 3.3:-41217880 | MS.gene21976:CDS |
| TAAGCCGCAATGTGATTGCG+GGG | 0.649751 | 3.3:-41216192 | MS.gene21976:CDS |
| TGATGAGAGTATGTTTGCGA+TGG | 0.651348 | 3.3:-41218192 | MS.gene21976:CDS |
| CGGCTTGAAGAATGGTGGTG+CGG | 0.652815 | 3.3:-41217875 | MS.gene21976:CDS |
| TAATCCCAAGCAGATATGTG+TGG | 0.661008 | 3.3:-41218135 | MS.gene21976:intron |
| AGGTGGTGGTTGGAACACAA+TGG | 0.672265 | 3.3:-41219533 | MS.gene21976:CDS |
| TTCTATTTGACAGATGACAC+GGG | 0.675650 | 3.3:-41216298 | MS.gene21976:CDS |
| ATGACCCCGCAATCACATTG+CGG | 0.681733 | 3.3:+41216188 | None:intergenic |
| ACTTGGATAACAAACCGAGA+CGG | 0.695175 | 3.3:+41217832 | None:intergenic |
| GCATAACAGATTCCAAAACA+GGG | 0.706918 | 3.3:+41216338 | None:intergenic |
| TTGATGAGCATGGAAATAGG+TGG | 0.756865 | 3.3:-41219603 | MS.gene21976:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAACTTATTATTTTATT+TGG | - | chr3.3:41216284-41216303 | MS.gene21976:CDS | 10.0% |
| !!! | TATATTATTTTAAAGAGAAA+TGG | - | chr3.3:41218963-41218982 | MS.gene21976:intron | 10.0% |
| !! | AATATATCAGAAGTTAAAAA+AGG | + | chr3.3:41219584-41219603 | None:intergenic | 15.0% |
| !! | AATCACTTAATAATATATTG+CGG | + | chr3.3:41217222-41217241 | None:intergenic | 15.0% |
| !! | ACAACAAAAAAAAAAAGATA+AGG | + | chr3.3:41217770-41217789 | None:intergenic | 15.0% |
| !! | ATATATCAGAAGTTAAAAAA+GGG | + | chr3.3:41219583-41219602 | None:intergenic | 15.0% |
| !! | ATTGTATCTATAAAAAATGA+TGG | + | chr3.3:41217998-41218017 | None:intergenic | 15.0% |
| !! | TATAGTTGTTATGTTATAAA+AGG | - | chr3.3:41217560-41217579 | MS.gene21976:intron | 15.0% |
| !!! | TAATACCATATTAATTTGAA+CGG | - | chr3.3:41219094-41219113 | MS.gene21976:intron | 15.0% |
| !!! | TATATCCATATTTTAAATTG+CGG | + | chr3.3:41217171-41217190 | None:intergenic | 15.0% |
| !!! | TCATTTTTTATAGATACAAT+TGG | - | chr3.3:41217998-41218017 | MS.gene21976:CDS | 15.0% |
| !!! | TTAATTTGTCAGTTTTAAAA+TGG | - | chr3.3:41216804-41216823 | MS.gene21976:intron | 15.0% |
| !!! | TTTAAAGTGTATTTTTTGAT+CGG | - | chr3.3:41217038-41217057 | MS.gene21976:intron | 15.0% |
| !! | AAACTAAAATTGAAGTTATC+AGG | + | chr3.3:41219504-41219523 | None:intergenic | 20.0% |
| !! | AACTAAAATTGAAGTTATCA+GGG | + | chr3.3:41219503-41219522 | None:intergenic | 20.0% |
| !! | AACTAGTAAGTGTTTATATA+TGG | - | chr3.3:41218375-41218394 | MS.gene21976:CDS | 20.0% |
| !! | AAGAATCATATATTATCGAA+GGG | + | chr3.3:41218885-41218904 | None:intergenic | 20.0% |
| !! | ACTAGTAAGTGTTTATATAT+GGG | - | chr3.3:41218376-41218395 | MS.gene21976:CDS | 20.0% |
| !! | ATATATAAACACTTACTAGT+TGG | + | chr3.3:41218376-41218395 | None:intergenic | 20.0% |
| !! | GAAATTCAAATTTAACAGTT+TGG | - | chr3.3:41219377-41219396 | MS.gene21976:intron | 20.0% |
| !! | GTATTATTACCATTCTATTA+TGG | + | chr3.3:41219080-41219099 | None:intergenic | 20.0% |
| !! | TATATAAACACTTACTAGTT+GGG | + | chr3.3:41218375-41218394 | None:intergenic | 20.0% |
| !! | TATATTATTAAGTGATTCAG+TGG | - | chr3.3:41217225-41217244 | MS.gene21976:intron | 20.0% |
| !! | TTAATTCTAGTGAAGAAAAT+TGG | - | chr3.3:41218281-41218300 | MS.gene21976:intron | 20.0% |
| !! | TTCGATAATATATGATTCTT+CGG | - | chr3.3:41218885-41218904 | MS.gene21976:intron | 20.0% |
| !!! | AATGTTTTATAAGCATTTCA+GGG | - | chr3.3:41217597-41217616 | MS.gene21976:intron | 20.0% |
| !!! | ACTTAAAAGATGTTGTTTTT+TGG | + | chr3.3:41219407-41219426 | None:intergenic | 20.0% |
| !!! | ATTATTTTAAAGAGAAATGG+TGG | - | chr3.3:41218966-41218985 | MS.gene21976:intron | 20.0% |
| !!! | TGATAGTGTAAACAATTTTA+GGG | + | chr3.3:41217297-41217316 | None:intergenic | 20.0% |
| ! | AAATGTATTGTAACAGACAT+TGG | + | chr3.3:41217404-41217423 | None:intergenic | 25.0% |
| ! | AACATAACAACTATACCATT+GGG | + | chr3.3:41217555-41217574 | None:intergenic | 25.0% |
| ! | AATCATGAAAAATTTCCAGT+TGG | - | chr3.3:41219429-41219448 | MS.gene21976:intron | 25.0% |
| ! | AATGTATTGTAACAGACATT+GGG | + | chr3.3:41217403-41217422 | None:intergenic | 25.0% |
| ! | ACTATAAAAAAACTAGTGTG+TGG | - | chr3.3:41218314-41218333 | MS.gene21976:intron | 25.0% |
| ! | ATATAAACACTTACTAGTTG+GGG | + | chr3.3:41218374-41218393 | None:intergenic | 25.0% |
| ! | ATGCTTATTAATATTCCCAA+TGG | - | chr3.3:41217537-41217556 | MS.gene21976:intron | 25.0% |
| ! | ATGTTTATATCACGTGAAAA+TGG | + | chr3.3:41216872-41216891 | None:intergenic | 25.0% |
| ! | ATTGAGATAAAGAACAACAT+AGG | + | chr3.3:41216764-41216783 | None:intergenic | 25.0% |
| ! | CTATAAAAAAACTAGTGTGT+GGG | - | chr3.3:41218315-41218334 | MS.gene21976:intron | 25.0% |
| ! | CTATCATGGTTAAATATACT+AGG | - | chr3.3:41217958-41217977 | MS.gene21976:CDS | 25.0% |
| ! | GAAGAATCATATATTATCGA+AGG | + | chr3.3:41218886-41218905 | None:intergenic | 25.0% |
| ! | GTTTCTTAATTGGATATATC+CGG | + | chr3.3:41218605-41218624 | None:intergenic | 25.0% |
| ! | TAACATAACAACTATACCAT+TGG | + | chr3.3:41217556-41217575 | None:intergenic | 25.0% |
| ! | TATATATCATAGAATCCAGT+TGG | - | chr3.3:41216943-41216962 | MS.gene21976:intron | 25.0% |
| ! | TCATCATAAACTTACTATCA+TGG | - | chr3.3:41217944-41217963 | MS.gene21976:CDS | 25.0% |
| !! | AATCACCGCAATTTAAAATA+TGG | - | chr3.3:41217163-41217182 | MS.gene21976:intron | 25.0% |
| !! | ATATATAATTTGCACGTTTG+TGG | + | chr3.3:41216928-41216947 | None:intergenic | 25.0% |
| !! | CAATGTTTTATAAGCATTTC+AGG | - | chr3.3:41217596-41217615 | MS.gene21976:intron | 25.0% |
| !! | TTATAATGAGATAGAGGTAT+TGG | - | chr3.3:41218060-41218079 | MS.gene21976:intron | 25.0% |
| !! | TTTTGTTACAGCATTTAGTT+TGG | - | chr3.3:41216680-41216699 | MS.gene21976:intron | 25.0% |
| !!! | CAATTTTAGGGATACATAAA+TGG | + | chr3.3:41217285-41217304 | None:intergenic | 25.0% |
| !!! | GAAACTTGTTAAAAACAAGT+CGG | + | chr3.3:41218783-41218802 | None:intergenic | 25.0% |
| !!! | GTGATAGTGTAAACAATTTT+AGG | + | chr3.3:41217298-41217317 | None:intergenic | 25.0% |
| !!! | TCAATTTTAGTTTCTCCAAA+TGG | - | chr3.3:41219511-41219530 | MS.gene21976:CDS | 25.0% |
| AAGCATTAACTCTCCATTAT+GGG | + | chr3.3:41217523-41217542 | None:intergenic | 30.0% | |
| ACAACATTGAACAGAGTAAT+AGG | + | chr3.3:41216156-41216175 | None:intergenic | 30.0% | |
| ACTACAAAATTGAAGGTGAA+TGG | - | chr3.3:41219791-41219810 | MS.gene21976:CDS | 30.0% | |
| ACTTCTCCAAAACATGAATA+TGG | + | chr3.3:41219019-41219038 | None:intergenic | 30.0% | |
| AGAATTACACCCTCAAAATA+TGG | + | chr3.3:41219174-41219193 | None:intergenic | 30.0% | |
| CAACATTGAACAGAGTAATA+GGG | + | chr3.3:41216155-41216174 | None:intergenic | 30.0% | |
| CGAAACCGTTCAAATTAATA+TGG | + | chr3.3:41219102-41219121 | None:intergenic | 30.0% | |
| GTACAGATTCTGTATTATCT+TGG | - | chr3.3:41216346-41216365 | MS.gene21976:CDS | 30.0% | |
| TAAAAATGTCCCACATTGAA+GGG | - | chr3.3:41218345-41218364 | MS.gene21976:intron | 30.0% | |
| TAACAAAAAACGAGTGACTT+GGG | + | chr3.3:41218664-41218683 | None:intergenic | 30.0% | |
| TAAGCATTAACTCTCCATTA+TGG | + | chr3.3:41217524-41217543 | None:intergenic | 30.0% | |
| TAATTGCGGTGATCATATAA+CGG | + | chr3.3:41217071-41217090 | None:intergenic | 30.0% | |
| TAGAAGTCCTTGGTATTTAT+TGG | + | chr3.3:41219706-41219725 | None:intergenic | 30.0% | |
| TATTCTGATGAGATGAATGA+TGG | - | chr3.3:41216234-41216253 | MS.gene21976:CDS | 30.0% | |
| TCTTAATGATGACTGTTCAT+AGG | - | chr3.3:41217425-41217444 | MS.gene21976:intron | 30.0% | |
| TGTTATGCCAATAAATACCA+AGG | - | chr3.3:41219696-41219715 | MS.gene21976:intron | 30.0% | |
| TTAAAAATGTCCCACATTGA+AGG | - | chr3.3:41218344-41218363 | MS.gene21976:intron | 30.0% | |
| TTACAAACTCTCCCTATAAA+AGG | - | chr3.3:41218681-41218700 | MS.gene21976:intron | 30.0% | |
| ! | CATTTTGCTGACAATTATAC+TGG | - | chr3.3:41216642-41216661 | MS.gene21976:intron | 30.0% |
| ! | TGCATTTTTACCTCTATCAA+TGG | - | chr3.3:41217624-41217643 | MS.gene21976:intron | 30.0% |
| ! | TTAAAAAGTGCATATCCACA+TGG | + | chr3.3:41217108-41217127 | None:intergenic | 30.0% |
| ! | TTCGGTAGATGATAGAATTT+TGG | - | chr3.3:41219355-41219374 | MS.gene21976:intron | 30.0% |
| ! | TTCGGTGTAAAGAATCAAAT+GGG | + | chr3.3:41218716-41218735 | None:intergenic | 30.0% |
| ! | TTTCGGTGTAAAGAATCAAA+TGG | + | chr3.3:41218717-41218736 | None:intergenic | 30.0% |
| !! | ATACAATTGGTTCTGAGTTA+GGG | - | chr3.3:41218011-41218030 | MS.gene21976:CDS | 30.0% |
| !!! | AACGCGTTTTGTTTCTTAAT+TGG | + | chr3.3:41218615-41218634 | None:intergenic | 30.0% |
| !!! | ATGTTTTGGAGAAGTTAGAA+TGG | - | chr3.3:41219024-41219043 | MS.gene21976:intron | 30.0% |
| AAACAAAACGCGTTTGCTTA+AGG | - | chr3.3:41218621-41218640 | MS.gene21976:intron | 35.0% | |
| AACAAAAAACGAGTGACTTG+GGG | + | chr3.3:41218663-41218682 | None:intergenic | 35.0% | |
| AATGAACTCAATGTGCTCTA+CGG | - | chr3.3:41218124-41218143 | MS.gene21976:intron | 35.0% | |
| AATTCGTTTGGCAGTGAATA+AGG | + | chr3.3:41219463-41219482 | None:intergenic | 35.0% | |
| ACCTCTATCTCATTATAAGC+AGG | + | chr3.3:41218058-41218077 | None:intergenic | 35.0% | |
| ACTCAACCTAGTAACAACTT+CGG | - | chr3.3:41219337-41219356 | MS.gene21976:intron | 35.0% | |
| AGTGTTCCAACAAAAGACAT+AGG | + | chr3.3:41218259-41218278 | None:intergenic | 35.0% | |
| ATACCGCAACATTAACTGAT+TGG | + | chr3.3:41217495-41217514 | None:intergenic | 35.0% | |
| ATCTGTCAAATAGAAGTCCT+TGG | + | chr3.3:41219716-41219735 | None:intergenic | 35.0% | |
| ATGACTGTTCATAGGTTCAA+TGG | - | chr3.3:41217433-41217452 | MS.gene21976:intron | 35.0% | |
| ATTCACCCGTTCACAAAATT+GGG | + | chr3.3:41218435-41218454 | None:intergenic | 35.0% | |
| CCAAACGAATTATCCCTTAT+AGG | - | chr3.3:41219472-41219491 | MS.gene21976:intron | 35.0% | |
| CCTATAAGGGATAATTCGTT+TGG | + | chr3.3:41219475-41219494 | None:intergenic | 35.0% | |
| CTTCTATTTGACAGATGACA+CGG | - | chr3.3:41219720-41219739 | MS.gene21976:intron | 35.0% | |
| CTTGTTAAAAACAAGTCGGA+GGG | + | chr3.3:41218779-41218798 | None:intergenic | 35.0% | |
| GAAATATTAGCTCCAACACT+CGG | + | chr3.3:41219874-41219893 | None:intergenic | 35.0% | |
| GACTATGAACTTAAGACCAA+GGG | + | chr3.3:41218863-41218882 | None:intergenic | 35.0% | |
| GCATAACAGATTCCAAAACA+GGG | + | chr3.3:41219684-41219703 | None:intergenic | 35.0% | |
| GTAACAAAAAACGAGTGACT+TGG | + | chr3.3:41218665-41218684 | None:intergenic | 35.0% | |
| GTGATAACACCATATTTGAG+TGG | - | chr3.3:41219046-41219065 | MS.gene21976:intron | 35.0% | |
| TACCGCAACATTAACTGATT+GGG | + | chr3.3:41217494-41217513 | None:intergenic | 35.0% | |
| TATATTGCGGTGACTGTTAA+CGG | + | chr3.3:41217209-41217228 | None:intergenic | 35.0% | |
| TCCTGCTTATAATGAGATAG+AGG | - | chr3.3:41218054-41218073 | MS.gene21976:intron | 35.0% | |
| TCGGTGTAAAGAATCAAATG+GGG | + | chr3.3:41218715-41218734 | None:intergenic | 35.0% | |
| TGTAACAGACATTGGGAAAA+AGG | + | chr3.3:41217396-41217415 | None:intergenic | 35.0% | |
| TTAATCGAACAGTTGTAGCT+GGG | - | chr3.3:41219220-41219239 | MS.gene21976:intron | 35.0% | |
| TTCTATTTGACAGATGACAC+GGG | - | chr3.3:41219721-41219740 | MS.gene21976:intron | 35.0% | |
| TTGCAAGACTCAGTTAATTG+CGG | + | chr3.3:41217085-41217104 | None:intergenic | 35.0% | |
| ! | AACGATTGAGCCATATTTTG+AGG | - | chr3.3:41219161-41219180 | MS.gene21976:intron | 35.0% |
| ! | AATTTTGTAGTGCGGTTCTT+TGG | + | chr3.3:41219782-41219801 | None:intergenic | 35.0% |
| ! | ACTTGTTAAAAACAAGTCGG+AGG | + | chr3.3:41218780-41218799 | None:intergenic | 35.0% |
| ! | ACTTTCATATGACCCTGTTT+TGG | - | chr3.3:41219669-41219688 | MS.gene21976:CDS | 35.0% |
| ! | GTAGTGCCATATTCATGTTT+TGG | - | chr3.3:41219010-41219029 | MS.gene21976:intron | 35.0% |
| ! | TCACCTTCAATTTTGTAGTG+CGG | + | chr3.3:41219790-41219809 | None:intergenic | 35.0% |
| ! | TTTGGAACGAACAAAAGCAT+GGG | + | chr3.3:41219764-41219783 | None:intergenic | 35.0% |
| !! | AATGAGGCTCACTTTAAGAT+AGG | - | chr3.3:41216466-41216485 | MS.gene21976:intron | 35.0% |
| !! | ACGATTGAGCCATATTTTGA+GGG | - | chr3.3:41219162-41219181 | MS.gene21976:intron | 35.0% |
| !! | GATACAATTGGTTCTGAGTT+AGG | - | chr3.3:41218010-41218029 | MS.gene21976:CDS | 35.0% |
| !!! | AAGCATCGACTGTGAATTTT+CGG | + | chr3.3:41218734-41218753 | None:intergenic | 35.0% |
| AACTTAAGACCAAGGGACTA+TGG | + | chr3.3:41218856-41218875 | None:intergenic | 40.0% | |
| ACCGCAACATTAACTGATTG+GGG | + | chr3.3:41217493-41217512 | None:intergenic | 40.0% | |
| ACTTGGATAACAAACCGAGA+CGG | + | chr3.3:41218190-41218209 | None:intergenic | 40.0% | |
| AGTCTACCTTGCACAACTTT+GGG | - | chr3.3:41219274-41219293 | MS.gene21976:intron | 40.0% | |
| ATGTCGAAAGCCATTGATAG+AGG | + | chr3.3:41217637-41217656 | None:intergenic | 40.0% | |
| CAGAAGTTAAAAAAGGGCTG+TGG | + | chr3.3:41219577-41219596 | None:intergenic | 40.0% | |
| CATCTACCGAAGTTGTTACT+AGG | + | chr3.3:41219346-41219365 | None:intergenic | 40.0% | |
| CATTCACCCGTTCACAAAAT+TGG | + | chr3.3:41218436-41218455 | None:intergenic | 40.0% | |
| CTCGTCAACACTTAACCATT+TGG | + | chr3.3:41219529-41219548 | None:intergenic | 40.0% | |
| GAACCGCACTACAAAATTGA+AGG | - | chr3.3:41219784-41219803 | MS.gene21976:CDS | 40.0% | |
| GAAGTCTGCAAAGAGAGTAA+AGG | + | chr3.3:41217748-41217767 | None:intergenic | 40.0% | |
| GAGAAGAGAGGAAAAAACAC+AGG | + | chr3.3:41218757-41218776 | None:intergenic | 40.0% | |
| GGACTATGAACTTAAGACCA+AGG | + | chr3.3:41218864-41218883 | None:intergenic | 40.0% | |
| GGCATAACAGATTCCAAAAC+AGG | + | chr3.3:41219685-41219704 | None:intergenic | 40.0% | |
| GGGATTAAACTCAACGATGA+AGG | + | chr3.3:41217871-41217890 | None:intergenic | 40.0% | |
| GTCTCAGCACCATAATAGAA+TGG | - | chr3.3:41219068-41219087 | MS.gene21976:intron | 40.0% | |
| GTGGTATCACCATATTTGAG+TGG | - | chr3.3:41218985-41219004 | MS.gene21976:intron | 40.0% | |
| GTTAATCGAACAGTTGTAGC+TGG | - | chr3.3:41219219-41219238 | MS.gene21976:intron | 40.0% | |
| GTTCCAACAAAAGACATAGG+AGG | + | chr3.3:41218256-41218275 | None:intergenic | 40.0% | |
| TAATCCCAAGCAGATATGTG+TGG | - | chr3.3:41217884-41217903 | MS.gene21976:CDS | 40.0% | |
| TAATCGCAGCTGATGTTGAT+TGG | - | chr3.3:41217790-41217809 | MS.gene21976:intron | 40.0% | |
| TAGTCTACCTTGCACAACTT+TGG | - | chr3.3:41219273-41219292 | MS.gene21976:intron | 40.0% | |
| TATCAGGGTGATGCCTATAA+GGG | + | chr3.3:41219488-41219507 | None:intergenic | 40.0% | |
| TCTCATTTGAACCAACTCCA+GGG | + | chr3.3:41216558-41216577 | None:intergenic | 40.0% | |
| TCTGCATTGTACAGTCTAAG+AGG | - | chr3.3:41217673-41217692 | MS.gene21976:intron | 40.0% | |
| TGAACGTATCAGAAACCAAC+TGG | + | chr3.3:41216961-41216980 | None:intergenic | 40.0% | |
| TGGATATATCCGGAAGTTTC+TGG | + | chr3.3:41218595-41218614 | None:intergenic | 40.0% | |
| TTAAGCTCGTCATGCACAAA+TGG | + | chr3.3:41216186-41216205 | None:intergenic | 40.0% | |
| TTAATACCGAAGCGACAGAA+AGG | + | chr3.3:41218819-41218838 | None:intergenic | 40.0% | |
| TTATCAGGGTGATGCCTATA+AGG | + | chr3.3:41219489-41219508 | None:intergenic | 40.0% | |
| TTCAACACACATACGAGAAG+AGG | - | chr3.3:41216208-41216227 | MS.gene21976:CDS | 40.0% | |
| TTCTGAGTTAGGGAGATTTG+TGG | - | chr3.3:41218021-41218040 | MS.gene21976:CDS | 40.0% | |
| TTCTTAAGACCATAGTCCCT+TGG | - | chr3.3:41218844-41218863 | MS.gene21976:intron | 40.0% | |
| TTGAACGGTTTCGAATAGAG+CGG | - | chr3.3:41219109-41219128 | MS.gene21976:intron | 40.0% | |
| TTGATGAGCATGGAAATAGG+TGG | - | chr3.3:41216416-41216435 | MS.gene21976:intron | 40.0% | |
| TTTAAGCCGCAATGTGATTG+CGG | - | chr3.3:41219825-41219844 | MS.gene21976:CDS | 40.0% | |
| ! | GAAGTAGTGTGCTTTTCTCA+TGG | - | chr3.3:41218097-41218116 | MS.gene21976:intron | 40.0% |
| ! | GTTCCTCCTATGTCTTTTGT+TGG | - | chr3.3:41218250-41218269 | MS.gene21976:intron | 40.0% |
| ! | TAGTGTGCTTTTCTCATGGT+TGG | - | chr3.3:41218101-41218120 | MS.gene21976:intron | 40.0% |
| ! | TGAGATGAATGATGGAGTCT+TGG | - | chr3.3:41216242-41216261 | MS.gene21976:CDS | 40.0% |
| ! | TGATGAGAGTATGTTTGCGA+TGG | - | chr3.3:41217827-41217846 | MS.gene21976:intron | 40.0% |
| ! | TGGATTTGCTCAGATGTGTT+TGG | - | chr3.3:41216366-41216385 | MS.gene21976:intron | 40.0% |
| !! | AAGTTCTGTTGCTCTGAAGT+TGG | - | chr3.3:41216393-41216412 | MS.gene21976:intron | 40.0% |
| !! | AAGTTTCTGGATACGCGTTT+TGG | + | chr3.3:41218582-41218601 | None:intergenic | 40.0% |
| !! | ACTTTAAGATAGGTGGTGGT+TGG | - | chr3.3:41216476-41216495 | MS.gene21976:CDS | 40.0% |
| !! | AGAGGTATTGGTTGAGAGAA+AGG | - | chr3.3:41218072-41218091 | MS.gene21976:intron | 40.0% |
| !! | CAAATGGTTAAGTGTTGACG+AGG | - | chr3.3:41219527-41219546 | MS.gene21976:CDS | 40.0% |
| !! | CTTTGGAACGAACAAAAGCA+TGG | + | chr3.3:41219765-41219784 | None:intergenic | 40.0% |
| !! | TCGGTTTGTTATCCAAGTGA+GGG | - | chr3.3:41218192-41218211 | MS.gene21976:CDS | 40.0% |
| !! | TGGTTGATGAGCATGGAAAT+AGG | - | chr3.3:41216413-41216432 | MS.gene21976:intron | 40.0% |
| AACACAATGGTCAAGGCTAG+AGG | - | chr3.3:41216499-41216518 | MS.gene21976:CDS | 45.0% | |
| AACGCGTATCCAGAAACTTC+CGG | - | chr3.3:41218583-41218602 | MS.gene21976:intron | 45.0% | |
| AACTGAGTCTTGCAACCATG+TGG | - | chr3.3:41217090-41217109 | MS.gene21976:intron | 45.0% | |
| AAGACATAGGAGGAACGTGA+CGG | + | chr3.3:41218246-41218265 | None:intergenic | 45.0% | |
| AATAAGGCTGGTACACCAAC+TGG | + | chr3.3:41219447-41219466 | None:intergenic | 45.0% | |
| ACGAACCACACATATCTGCT+TGG | + | chr3.3:41217892-41217911 | None:intergenic | 45.0% | |
| ATCCAAGTGAGGGATCGTTA+TGG | - | chr3.3:41218202-41218221 | MS.gene21976:CDS | 45.0% | |
| ATGGGAAAAGTGACCTCCAA+GGG | - | chr3.3:41218394-41218413 | MS.gene21976:CDS | 45.0% | |
| CACAAAATTGGGTACCCCAA+GGG | + | chr3.3:41218424-41218443 | None:intergenic | 45.0% | |
| CCCCCAATCAGTTAATGTTG+CGG | - | chr3.3:41217489-41217508 | MS.gene21976:intron | 45.0% | |
| CCGCAACATTAACTGATTGG+GGG | + | chr3.3:41217492-41217511 | None:intergenic | 45.0% | |
| CGAACCACACATATCTGCTT+GGG | + | chr3.3:41217891-41217910 | None:intergenic | 45.0% | |
| CTCATTTGAACCAACTCCAG+GGG | + | chr3.3:41216557-41216576 | None:intergenic | 45.0% | |
| GCACTACGACCACTCAAATA+TGG | + | chr3.3:41218997-41219016 | None:intergenic | 45.0% | |
| GTCTCATTTGAACCAACTCC+AGG | + | chr3.3:41216559-41216578 | None:intergenic | 45.0% | |
| GTGCTGAGACCACTCAAATA+TGG | + | chr3.3:41219058-41219077 | None:intergenic | 45.0% | |
| TATGGGAAAAGTGACCTCCA+AGG | - | chr3.3:41218393-41218412 | MS.gene21976:CDS | 45.0% | |
| TCACAAAATTGGGTACCCCA+AGG | + | chr3.3:41218425-41218444 | None:intergenic | 45.0% | |
| TCCAAGTGAGGGATCGTTAT+GGG | - | chr3.3:41218203-41218222 | MS.gene21976:CDS | 45.0% | |
| TGCGGTATATGTGCCCATAA+TGG | - | chr3.3:41217507-41217526 | MS.gene21976:intron | 45.0% | |
| TGGGGGACGTGAATAATCAA+AGG | + | chr3.3:41217475-41217494 | None:intergenic | 45.0% | |
| TGGTTGGAACACAATGGTCA+AGG | - | chr3.3:41216492-41216511 | MS.gene21976:CDS | 45.0% | |
| TTAAAGTGAGCCTCATTGCC+CGG | + | chr3.3:41216463-41216482 | None:intergenic | 45.0% | |
| TTAAGCCGCAATGTGATTGC+GGG | - | chr3.3:41219826-41219845 | MS.gene21976:CDS | 45.0% | |
| TTGATCGAAGCCACTCGATA+CGG | + | chr3.3:41219142-41219161 | None:intergenic | 45.0% | |
| ! | CAGCTGATGTTGATTGGTTG+GGG | - | chr3.3:41217796-41217815 | MS.gene21976:intron | 45.0% |
| ! | GCAGCTGATGTTGATTGGTT+GGG | - | chr3.3:41217795-41217814 | MS.gene21976:intron | 45.0% |
| ! | GGGCAAGCTCTCCTTTTATA+GGG | + | chr3.3:41218695-41218714 | None:intergenic | 45.0% |
| ! | GGGTACCCAATTTTGTGAAC+GGG | - | chr3.3:41218427-41218446 | MS.gene21976:intron | 45.0% |
| ! | TCTACTCCTTTCTGTCGCTT+CGG | - | chr3.3:41218810-41218829 | MS.gene21976:intron | 45.0% |
| !! | CTCGGTTTGTTATCCAAGTG+AGG | - | chr3.3:41218191-41218210 | MS.gene21976:CDS | 45.0% |
| !! | CTGAAGTTGGTTGATGAGCA+TGG | - | chr3.3:41216406-41216425 | MS.gene21976:intron | 45.0% |
| !! | GAGGCTCACTTTAAGATAGG+TGG | - | chr3.3:41216469-41216488 | MS.gene21976:intron | 45.0% |
| !! | GCTCACTTTAAGATAGGTGG+TGG | - | chr3.3:41216472-41216491 | MS.gene21976:intron | 45.0% |
| !! | GCTCTCTTTAAGACGTTTCG+TGG | + | chr3.3:41219305-41219324 | None:intergenic | 45.0% |
| !! | GGGGTACCCAATTTTGTGAA+CGG | - | chr3.3:41218426-41218445 | MS.gene21976:intron | 45.0% |
| !! | TCTGGATACGCGTTTTGGAT+CGG | + | chr3.3:41218577-41218596 | None:intergenic | 45.0% |
| !!! | TAGCTGGGCTTGTTTTATCC+TGG | - | chr3.3:41219235-41219254 | MS.gene21976:intron | 45.0% |
| AAGGCTAGAGGACTTGAAGC+GGG | - | chr3.3:41216511-41216530 | MS.gene21976:CDS | 50.0% | |
| ACGTCTTAAAGAGAGCGACC+TGG | - | chr3.3:41219309-41219328 | MS.gene21976:intron | 50.0% | |
| AGACATAGGAGGAACGTGAC+GGG | + | chr3.3:41218245-41218264 | None:intergenic | 50.0% | |
| ATGACCCCGCAATCACATTG+CGG | + | chr3.3:41219834-41219853 | None:intergenic | 50.0% | |
| ATGCACTCTCCAGTTTGTGC+CGG | - | chr3.3:41216441-41216460 | MS.gene21976:intron | 50.0% | |
| CAAGGCTAGAGGACTTGAAG+CGG | - | chr3.3:41216510-41216529 | MS.gene21976:CDS | 50.0% | |
| CCAAGTGAGGGATCGTTATG+GGG | - | chr3.3:41218204-41218223 | MS.gene21976:CDS | 50.0% | |
| CGAGGCAGCAAAAGGTTATC+TGG | - | chr3.3:41219545-41219564 | MS.gene21976:CDS | 50.0% | |
| CGTTTGGCAGTGAATAAGGC+TGG | + | chr3.3:41219459-41219478 | None:intergenic | 50.0% | |
| CTCTACGGCTTGAAGAATGG+TGG | - | chr3.3:41218139-41218158 | MS.gene21976:CDS | 50.0% | |
| GCACTACCCAAAGTTGTGCA+AGG | + | chr3.3:41219283-41219302 | None:intergenic | 50.0% | |
| GCGGGGTCATTCATCAGAAT+CGG | - | chr3.3:41219844-41219863 | MS.gene21976:CDS | 50.0% | |
| GTGCTCTACGGCTTGAAGAA+TGG | - | chr3.3:41218136-41218155 | MS.gene21976:CDS | 50.0% | |
| TAAGCCGCAATGTGATTGCG+GGG | - | chr3.3:41219827-41219846 | MS.gene21976:CDS | 50.0% | |
| TCGTCATGCACAAATGGAGC+AGG | + | chr3.3:41216180-41216199 | None:intergenic | 50.0% | |
| TGGTTAATGTGCAGCCGTCT+CGG | - | chr3.3:41218173-41218192 | MS.gene21976:CDS | 50.0% | |
| TTGCGATGGCTGGACTGAAA+TGG | - | chr3.3:41217841-41217860 | MS.gene21976:intron | 50.0% | |
| TTGGGGTGACCCTTCAATGT+GGG | + | chr3.3:41218357-41218376 | None:intergenic | 50.0% | |
| ! | AGGTGGTGGTTGGAACACAA+TGG | - | chr3.3:41216486-41216505 | MS.gene21976:CDS | 50.0% |
| ! | CGCAGCTGATGTTGATTGGT+TGG | - | chr3.3:41217794-41217813 | MS.gene21976:intron | 50.0% |
| ! | GAATGGTGGTGCGGTAACAT+TGG | - | chr3.3:41218153-41218172 | MS.gene21976:CDS | 50.0% |
| ! | GAGAGTATGTTTGCGATGGC+TGG | - | chr3.3:41217831-41217850 | MS.gene21976:intron | 50.0% |
| ! | GGGGCAAGCTCTCCTTTTAT+AGG | + | chr3.3:41218696-41218715 | None:intergenic | 50.0% |
| ! | TACTAGGTTGAGTCACGACC+AGG | + | chr3.3:41219330-41219349 | None:intergenic | 50.0% |
| !! | AGTGTTGACGAGGCAGCAAA+AGG | - | chr3.3:41219537-41219556 | MS.gene21976:CDS | 50.0% |
| !! | ATACGCGTTTTGGATCGGGT+CGG | + | chr3.3:41218572-41218591 | None:intergenic | 50.0% |
| !! | CTGGATACGCGTTTTGGATC+GGG | + | chr3.3:41218576-41218595 | None:intergenic | 50.0% |
| !!! | AGTGTTGTTTTTGGAGCCCC+TGG | - | chr3.3:41216538-41216557 | MS.gene21976:intron | 50.0% |
| !!! | CTGGGCTTGTTTTATCCTGG+AGG | - | chr3.3:41219238-41219257 | MS.gene21976:intron | 50.0% |
| !!! | GCGGGTGCAAGTGTTGTTTT+TGG | - | chr3.3:41216529-41216548 | MS.gene21976:intron | 50.0% |
| !!! | GGCTTGTTTTATCCTGGAGG+CGG | - | chr3.3:41219241-41219260 | MS.gene21976:intron | 50.0% |
| ACAAGTCGGAGGGAGAAGAG+AGG | + | chr3.3:41218769-41218788 | None:intergenic | 55.0% | |
| ACATAGGAGGAACGTGACGG+GGG | + | chr3.3:41218243-41218262 | None:intergenic | 55.0% | |
| AGAATCGGTGCACCGAGTGT+TGG | - | chr3.3:41219859-41219878 | MS.gene21976:CDS | 55.0% | |
| CCCCATAACGATCCCTCACT+TGG | + | chr3.3:41218207-41218226 | None:intergenic | 55.0% | |
| CGGTTACGTACCGTATCGAG+TGG | - | chr3.3:41219129-41219148 | MS.gene21976:intron | 55.0% | |
| GACATAGGAGGAACGTGACG+GGG | + | chr3.3:41218244-41218263 | None:intergenic | 55.0% | |
| GTTGGGGTGACCCTTCAATG+TGG | + | chr3.3:41218358-41218377 | None:intergenic | 55.0% | |
| TGCACTCTCCAGTTTGTGCC+GGG | - | chr3.3:41216442-41216461 | MS.gene21976:intron | 55.0% | |
| ! | CGGCTTGAAGAATGGTGGTG+CGG | - | chr3.3:41218144-41218163 | MS.gene21976:CDS | 55.0% |
| !!! | GTTTTTGGAGCCCCTGGAGT+TGG | - | chr3.3:41216544-41216563 | MS.gene21976:intron | 55.0% |
| CCAGTTTGTGCCGGGCAATG+AGG | - | chr3.3:41216450-41216469 | MS.gene21976:intron | 60.0% | |
| CCTCATTGCCCGGCACAAAC+TGG | + | chr3.3:41216453-41216472 | None:intergenic | 60.0% | |
| ! | ACCTCCAAGGGTGTGCCCTT+GGG | - | chr3.3:41218406-41218425 | MS.gene21976:intron | 60.0% |
| ! | GTTTTATCCTGGAGGCGGCG+TGG | - | chr3.3:41219246-41219265 | MS.gene21976:intron | 60.0% |
| CAGATGACACGGGCCACGTC+TGG | - | chr3.3:41219731-41219750 | MS.gene21976:intron | 65.0% | |
| CATGGGTGCAACGCCAGACG+TGG | + | chr3.3:41219747-41219766 | None:intergenic | 65.0% | |
| CTATCAACCACGCCGCCTCC+AGG | + | chr3.3:41219256-41219275 | None:intergenic | 65.0% | |
| ! | CCTCCAAGGGTGTGCCCTTG+GGG | - | chr3.3:41218407-41218426 | MS.gene21976:intron | 65.0% |
| ! | GACCTCCAAGGGTGTGCCCT+TGG | - | chr3.3:41218405-41218424 | MS.gene21976:intron | 65.0% |
| ! | GTACCCCAAGGGCACACCCT+TGG | + | chr3.3:41218413-41218432 | None:intergenic | 65.0% |
| ! | CCCCAAGGGCACACCCTTGG+AGG | + | chr3.3:41218410-41218429 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 41216123 | 41219918 | 41216123 | ID=MS.gene21976 |
| chr3.3 | mRNA | 41216123 | 41219918 | 41216123 | ID=MS.gene21976.t1;Parent=MS.gene21976 |
| chr3.3 | exon | 41219778 | 41219918 | 41219778 | ID=MS.gene21976.t1.exon1;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41219778 | 41219918 | 41219778 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41219476 | 41219689 | 41219476 | ID=MS.gene21976.t1.exon2;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41219476 | 41219689 | 41219476 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41219249 | 41219282 | 41219249 | ID=MS.gene21976.t1.exon3;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41219249 | 41219282 | 41219249 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41218347 | 41218423 | 41218347 | ID=MS.gene21976.t1.exon4;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41218347 | 41218423 | 41218347 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41218136 | 41218242 | 41218136 | ID=MS.gene21976.t1.exon5;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41218136 | 41218242 | 41218136 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41217847 | 41218061 | 41217847 | ID=MS.gene21976.t1.exon6;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41217847 | 41218061 | 41217847 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41216475 | 41216547 | 41216475 | ID=MS.gene21976.t1.exon7;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41216475 | 41216547 | 41216475 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| chr3.3 | exon | 41216123 | 41216374 | 41216123 | ID=MS.gene21976.t1.exon8;Parent=MS.gene21976.t1 |
| chr3.3 | CDS | 41216123 | 41216374 | 41216123 | ID=cds.MS.gene21976.t1;Parent=MS.gene21976.t1 |
| Gene Sequence |
| Protein sequence |
