Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22030.t1 | RHN70244.1 | 75 | 296 | 15 | 2 | 108 | 344 | 1028 | 1323 | 6.30E-110 | 407.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22030.t1 | Q9FWQ5 | 33.7 | 270 | 113 | 5 | 108 | 331 | 1392 | 1641 | 2.2e-42 | 174.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22030.t1 | A0A396J0M7 | 75.0 | 296 | 15 | 2 | 108 | 344 | 1028 | 1323 | 4.5e-110 | 407.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22030.t1 | TR | TAZ |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22030.t1 | MTR_3g101100 | 72.039 | 304 | 20 | 3 | 106 | 344 | 1072 | 1375 | 1.52e-140 | 432 |
| MS.gene22030.t1 | MTR_3g107960 | 62.416 | 298 | 45 | 4 | 106 | 344 | 897 | 1186 | 2.45e-114 | 359 |
| MS.gene22030.t1 | MTR_5g085310 | 45.289 | 329 | 58 | 5 | 83 | 344 | 748 | 1021 | 1.31e-75 | 252 |
| MS.gene22030.t1 | MTR_6g017010 | 50.763 | 262 | 41 | 3 | 106 | 332 | 506 | 714 | 1.75e-72 | 240 |
| MS.gene22030.t1 | MTR_5g065160 | 87.037 | 108 | 14 | 0 | 1 | 108 | 1 | 108 | 2.85e-60 | 200 |
| MS.gene22030.t1 | MTR_5g065160 | 88.679 | 106 | 12 | 0 | 1 | 106 | 1 | 106 | 5.67e-60 | 200 |
| MS.gene22030.t1 | MTR_5g065160 | 86.111 | 108 | 14 | 1 | 1 | 108 | 1 | 107 | 7.01e-58 | 194 |
| MS.gene22030.t1 | MTR_5g065160 | 87.629 | 97 | 12 | 0 | 10 | 106 | 3 | 99 | 8.79e-53 | 181 |
| MS.gene22030.t1 | MTR_5g017020 | 47.442 | 215 | 25 | 4 | 130 | 309 | 364 | 525 | 1.48e-45 | 163 |
| MS.gene22030.t1 | MTR_4g005050 | 34.082 | 267 | 115 | 6 | 108 | 331 | 1396 | 1644 | 1.46e-44 | 164 |
| MS.gene22030.t1 | MTR_5g017020 | 41.200 | 250 | 39 | 6 | 130 | 344 | 364 | 540 | 1.81e-39 | 147 |
| MS.gene22030.t1 | MTR_0299s0030 | 44.375 | 160 | 52 | 2 | 101 | 227 | 174 | 329 | 5.16e-29 | 115 |
| MS.gene22030.t1 | MTR_6g017000 | 43.609 | 133 | 42 | 1 | 106 | 205 | 815 | 947 | 2.21e-27 | 114 |
| MS.gene22030.t1 | MTR_6g017140 | 48.649 | 74 | 38 | 0 | 101 | 174 | 348 | 421 | 7.78e-18 | 84.7 |
| MS.gene22030.t1 | MTR_1g047940 | 57.534 | 73 | 25 | 4 | 276 | 344 | 118 | 188 | 1.41e-14 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1363 | 1612 | 3.91e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1327 | 1576 | 4.04e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1327 | 1576 | 4.04e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1327 | 1576 | 4.04e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1366 | 1615 | 4.22e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1366 | 1615 | 4.22e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1366 | 1615 | 4.22e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1366 | 1615 | 4.22e-47 | 172 |
| MS.gene22030.t1 | AT1G16710 | 34.457 | 267 | 115 | 5 | 108 | 331 | 1392 | 1641 | 5.07e-47 | 171 |
| MS.gene22030.t1 | AT1G79000 | 34.211 | 266 | 115 | 5 | 109 | 331 | 1384 | 1632 | 1.05e-45 | 167 |
| MS.gene22030.t1 | AT1G79000 | 34.211 | 266 | 115 | 5 | 109 | 331 | 1384 | 1632 | 1.10e-45 | 167 |
| MS.gene22030.t1 | AT1G79000 | 34.211 | 266 | 115 | 5 | 109 | 331 | 1360 | 1608 | 1.15e-45 | 167 |
| MS.gene22030.t1 | AT3G12980 | 31.835 | 267 | 114 | 8 | 108 | 331 | 1363 | 1604 | 3.04e-35 | 137 |
| MS.gene22030.t1 | AT3G12980 | 31.835 | 267 | 114 | 8 | 108 | 331 | 1282 | 1523 | 3.41e-35 | 137 |
| MS.gene22030.t1 | AT1G55970 | 29.496 | 278 | 134 | 7 | 88 | 323 | 1144 | 1401 | 1.81e-30 | 123 |
| MS.gene22030.t1 | AT1G55970 | 29.496 | 278 | 134 | 7 | 88 | 323 | 1130 | 1387 | 2.35e-30 | 123 |
| MS.gene22030.t1 | AT1G67220 | 26.259 | 278 | 135 | 8 | 97 | 326 | 1068 | 1323 | 1.71e-22 | 99.8 |
Find 62 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTGGTAGGCCATATATTT+TGG | 0.151804 | 3.3:-40458619 | None:intergenic |
| TCTCACATTTCCAGCTCTTT+TGG | 0.200246 | 3.3:-40459247 | None:intergenic |
| CACAGAATGCAAGGAAATTC+TGG | 0.210178 | 3.3:+40458721 | MS.gene22030:CDS |
| ATTAGGTTGGCCAAAATATA+TGG | 0.272286 | 3.3:+40458609 | MS.gene22030:intron |
| AAAAGAGGATTATCTAATTC+CGG | 0.288993 | 3.3:+40454582 | MS.gene22030:CDS |
| TGATTCCCAGATTGATATAT+TGG | 0.290713 | 3.3:-40459401 | None:intergenic |
| TTTGAGTCAACTTGTGTTCA+TGG | 0.292920 | 3.3:-40459325 | None:intergenic |
| CATTTGCTCTGCATGCTATA+AGG | 0.316886 | 3.3:+40459286 | MS.gene22030:CDS |
| GAAGGCATTCCACTCGATTA+TGG | 0.345927 | 3.3:+40454720 | MS.gene22030:CDS |
| TGCAACTCGCCATTCTTCGC+TGG | 0.354066 | 3.3:-40458915 | None:intergenic |
| GTGCGAAATTCGAGTGAATC+GGG | 0.363640 | 3.3:+40459648 | MS.gene22030:CDS |
| TCATGAAATTGATTCGTTCC+TGG | 0.369129 | 3.3:+40454492 | MS.gene22030:CDS |
| AATATATCAATCTGGGAATC+AGG | 0.371383 | 3.3:+40459403 | MS.gene22030:CDS |
| CAATATCTGAATGGAATTCC+CGG | 0.372261 | 3.3:-40454601 | None:intergenic |
| TCAAGACCAATATATCAATC+TGG | 0.374921 | 3.3:+40459395 | MS.gene22030:CDS |
| TCAGAGTAGGATTGTGTAGA+TGG | 0.383953 | 3.3:-40459178 | None:intergenic |
| GATGAGAAGAGAAGAATTCC+AGG | 0.398386 | 3.3:-40454510 | None:intergenic |
| CATATTGCAAGTGAGCTATA+TGG | 0.398580 | 3.3:-40458649 | None:intergenic |
| AAAGAGGATTATCTAATTCC+GGG | 0.399771 | 3.3:+40454583 | MS.gene22030:CDS |
| ATGAAACTGAAGAAAGAAAA+TGG | 0.400834 | 3.3:-40454456 | None:intergenic |
| CTGGGTGTGCATCAGAACTA+TGG | 0.403923 | 3.3:-40458896 | None:intergenic |
| CACTCGAATTTCGCACCTAC+TGG | 0.416982 | 3.3:-40459641 | None:intergenic |
| CGAGTTGCATACACTTTGTC+AGG | 0.417455 | 3.3:+40458929 | MS.gene22030:CDS |
| CCGCTGAACGAAACTATTAT+CGG | 0.421702 | 3.3:+40454656 | MS.gene22030:CDS |
| TTGCTTTCACGAAGTTTGTT+CGG | 0.441717 | 3.3:+40454541 | MS.gene22030:CDS |
| GACCATCATCGAGGAATACT+TGG | 0.446298 | 3.3:-40459150 | None:intergenic |
| GCCAAAATATATGGCCTACC+AGG | 0.452024 | 3.3:+40458618 | MS.gene22030:CDS |
| CTTATAGCATGCAGAGCAAA+TGG | 0.457684 | 3.3:-40459285 | None:intergenic |
| ATCAGGAGTCAAATGAGAAA+AGG | 0.464649 | 3.3:+40459420 | MS.gene22030:CDS |
| TGCCGTGAAGTGATAGTGTC+TGG | 0.473473 | 3.3:+40458683 | MS.gene22030:CDS |
| GTCTTGATTTGAGAACAGTT+TGG | 0.479338 | 3.3:-40459604 | None:intergenic |
| GGTGCGAAATTCGAGTGAAT+CGG | 0.490997 | 3.3:+40459647 | MS.gene22030:CDS |
| GAAAGAAAATGGCGCCGATA+CGG | 0.491297 | 3.3:-40454445 | None:intergenic |
| TCCCAGACACTATCACTTCA+CGG | 0.498199 | 3.3:-40458685 | None:intergenic |
| TCAGGAGTCAAATGAGAAAA+GGG | 0.502725 | 3.3:+40459421 | MS.gene22030:CDS |
| GCAACTCGCCATTCTTCGCT+GGG | 0.503919 | 3.3:-40458914 | None:intergenic |
| CAAGACCAATATATCAATCT+GGG | 0.503999 | 3.3:+40459396 | MS.gene22030:CDS |
| TAGGATTGTGTAGATGGTAG+AGG | 0.509799 | 3.3:-40459172 | None:intergenic |
| GATGCACACCCAGCGAAGAA+TGG | 0.527925 | 3.3:+40458906 | MS.gene22030:CDS |
| TAAACATAACAATATCTGAA+TGG | 0.529384 | 3.3:-40454610 | None:intergenic |
| TCTACTTTCCGCGAATGAGA+AGG | 0.536891 | 3.3:+40454407 | None:intergenic |
| AGGAAATTCTGGAGTGCGAA+AGG | 0.542074 | 3.3:+40458732 | MS.gene22030:CDS |
| TGCCAAGTATTCCTCGATGA+TGG | 0.542961 | 3.3:+40459148 | MS.gene22030:CDS |
| ACAATGTATTCCAAAAGAGC+TGG | 0.547262 | 3.3:+40459237 | MS.gene22030:CDS |
| TCTGCATGCTATAAGGATAG+AGG | 0.554961 | 3.3:+40459293 | MS.gene22030:CDS |
| GAAAGTGACAAAGCAGTCGT+TGG | 0.555810 | 3.3:+40459955 | MS.gene22030:CDS |
| GCAGAGCAAATGGTGCACTC+TGG | 0.556191 | 3.3:-40459275 | None:intergenic |
| TCACGTTGTTATCGCCGTAT+CGG | 0.561697 | 3.3:+40454431 | MS.gene22030:CDS |
| TAGTCAGGATGAGATAAAGA+AGG | 0.573447 | 3.3:+40454702 | MS.gene22030:CDS |
| TTTACAACAGACATCAGAGT+AGG | 0.573922 | 3.3:-40459191 | None:intergenic |
| AAGATTCAGCATTAGCTGCA+CGG | 0.583221 | 3.3:-40459573 | None:intergenic |
| TGATAGTGTCTGGGAAGCGA+TGG | 0.590031 | 3.3:+40458693 | MS.gene22030:CDS |
| CGTTGTTCTCTCATGCCAGT+AGG | 0.604488 | 3.3:+40459626 | MS.gene22030:CDS |
| CCAAAATATATGGCCTACCA+GGG | 0.605422 | 3.3:+40458619 | MS.gene22030:CDS |
| CCGATAATAGTTTCGTTCAG+CGG | 0.612422 | 3.3:-40454656 | None:intergenic |
| TGCGAAATTCGAGTGAATCG+GGG | 0.624993 | 3.3:+40459649 | MS.gene22030:CDS |
| GCCGTGAAGTGATAGTGTCT+GGG | 0.641094 | 3.3:+40458684 | MS.gene22030:CDS |
| GAATCAATTTCATGAACGAG+AGG | 0.643272 | 3.3:-40454484 | None:intergenic |
| CTTGTACCTCCATAATCGAG+TGG | 0.657474 | 3.3:-40454729 | None:intergenic |
| GGCATTCCACTCGATTATGG+AGG | 0.679084 | 3.3:+40454723 | MS.gene22030:CDS |
| TCGAGGAATACTTGGCACGA+CGG | 0.681417 | 3.3:-40459142 | None:intergenic |
| ATGGTAGAGGACCATCATCG+AGG | 0.748774 | 3.3:-40459159 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATTAACTAAAATAAAA+AGG | - | chr3.3:40458168-40458187 | None:intergenic | 10.0% |
| !! | ATATATATTTAAGTAACTAT+GGG | + | chr3.3:40457100-40457119 | MS.gene22030:intron | 10.0% |
| !! | TAATAAAAAATAAACTAAAG+TGG | - | chr3.3:40456941-40456960 | None:intergenic | 10.0% |
| !! | TATATAGATATATCTAAAAA+TGG | - | chr3.3:40457357-40457376 | None:intergenic | 10.0% |
| !! | TATATCTATATATGATAAAT+TGG | + | chr3.3:40457365-40457384 | MS.gene22030:intron | 10.0% |
| !!! | TTTTATTTTAGTTAATACTT+TGG | + | chr3.3:40458168-40458187 | MS.gene22030:intron | 10.0% |
| !! | AATCCTATTAGTATATATAT+AGG | + | chr3.3:40456431-40456450 | MS.gene22030:intron | 15.0% |
| !! | AGTTAATTTATTAAACTCAT+AGG | + | chr3.3:40457157-40457176 | MS.gene22030:intron | 15.0% |
| !! | GATATATATTTAAGTAACTA+TGG | + | chr3.3:40457099-40457118 | MS.gene22030:intron | 15.0% |
| !! | TTTCAAAAAAAAATTACTTC+AGG | - | chr3.3:40455615-40455634 | None:intergenic | 15.0% |
| !!! | AGAAGTTAAAACAATTTTAA+TGG | - | chr3.3:40456861-40456880 | None:intergenic | 15.0% |
| !!! | AGTATATGTTTTCATTTTAA+AGG | - | chr3.3:40458800-40458819 | None:intergenic | 15.0% |
| !!! | ATCAATTTTAGTTTAATGAA+GGG | - | chr3.3:40456636-40456655 | None:intergenic | 15.0% |
| !!! | GATAATTAAAAGCATTTAAA+TGG | + | chr3.3:40457253-40457272 | MS.gene22030:intron | 15.0% |
| !!! | TATCAATTTTAGTTTAATGA+AGG | - | chr3.3:40456637-40456656 | None:intergenic | 15.0% |
| !!! | TTTGATTATTTTTGAAGATT+TGG | + | chr3.3:40454864-40454883 | MS.gene22030:intron | 15.0% |
| !!! | TTTTCTTATTCATTCATTTT+TGG | + | chr3.3:40456831-40456850 | MS.gene22030:intron | 15.0% |
| !! | AAATAGAGTAAATACAAAAG+AGG | - | chr3.3:40456592-40456611 | None:intergenic | 20.0% |
| !! | ACACCTATATATATACTAAT+AGG | - | chr3.3:40456437-40456456 | None:intergenic | 20.0% |
| !! | AGAATCATATGAAAAACATT+AGG | - | chr3.3:40458967-40458986 | None:intergenic | 20.0% |
| !! | AGATATATCTAAAAATGGAT+AGG | - | chr3.3:40457352-40457371 | None:intergenic | 20.0% |
| !! | ATATAATCATTTATTCACCT+TGG | - | chr3.3:40457440-40457459 | None:intergenic | 20.0% |
| !! | ATATGAAAAACATTAGGTAT+AGG | - | chr3.3:40458961-40458980 | None:intergenic | 20.0% |
| !! | ATCTAAAAGGAAAAATCATT+AGG | + | chr3.3:40456760-40456779 | MS.gene22030:intron | 20.0% |
| !! | ATTATGTAAACAACTTAAAC+TGG | - | chr3.3:40458550-40458569 | None:intergenic | 20.0% |
| !! | CATGACTAAAAGAAATATAA+GGG | + | chr3.3:40457303-40457322 | MS.gene22030:intron | 20.0% |
| !! | TAAACATAACAATATCTGAA+TGG | - | chr3.3:40454613-40454632 | None:intergenic | 20.0% |
| !! | TATACCTTACAAAATCTAAA+AGG | + | chr3.3:40456747-40456766 | MS.gene22030:intron | 20.0% |
| !! | TCATGACTAAAAGAAATATA+AGG | + | chr3.3:40457302-40457321 | MS.gene22030:intron | 20.0% |
| !! | TCTTCATAGATAGATATTAA+TGG | - | chr3.3:40456983-40457002 | None:intergenic | 20.0% |
| !! | TTCATTCACTCAATTATAAA+AGG | - | chr3.3:40458503-40458522 | None:intergenic | 20.0% |
| !! | TTTAACCATAAAAAATGACT+TGG | - | chr3.3:40459847-40459866 | None:intergenic | 20.0% |
| !!! | AAAAAAACAGACACAATTTT+TGG | + | chr3.3:40458366-40458385 | MS.gene22030:intron | 20.0% |
| !!! | AAAGCTTTTATTAAAGTGTA+TGG | + | chr3.3:40455441-40455460 | MS.gene22030:intron | 20.0% |
| !!! | AAGTTTCCTTTTCAAAATAA+AGG | - | chr3.3:40458277-40458296 | None:intergenic | 20.0% |
| !!! | ACAAAATAATTAAGGCTTTT+TGG | + | chr3.3:40458843-40458862 | MS.gene22030:intron | 20.0% |
| !!! | ATATTTATGTTGATTTTGCA+GGG | + | chr3.3:40459892-40459911 | MS.gene22030:intron | 20.0% |
| !!! | TACACTTTAATAAAAGCTTT+TGG | - | chr3.3:40455441-40455460 | None:intergenic | 20.0% |
| !!! | TATATTTATGTTGATTTTGC+AGG | + | chr3.3:40459891-40459910 | MS.gene22030:intron | 20.0% |
| !!! | TATGAAAGAGAGTATTTTTA+TGG | - | chr3.3:40456729-40456748 | None:intergenic | 20.0% |
| !!! | TATGTTTTCATTTTAAAGGA+AGG | - | chr3.3:40458796-40458815 | None:intergenic | 20.0% |
| !!! | TCCTGTATATTTGTTATTTT+CGG | + | chr3.3:40457889-40457908 | MS.gene22030:intron | 20.0% |
| !!! | TGCTTATTTTGAATGTTTTA+TGG | + | chr3.3:40454802-40454821 | MS.gene22030:intron | 20.0% |
| !!! | TTAAAAGCATTTAAATGGAA+TGG | + | chr3.3:40457258-40457277 | MS.gene22030:intron | 20.0% |
| !!! | TTTTAGTTAATACTTTGGTT+AGG | + | chr3.3:40458173-40458192 | MS.gene22030:intron | 20.0% |
| !!! | TTTTCCTTTTAGATTTTGTA+AGG | - | chr3.3:40456754-40456773 | None:intergenic | 20.0% |
| !!! | TTTTTAATTCCTAGATTTGT+TGG | + | chr3.3:40459450-40459469 | MS.gene22030:intron | 20.0% |
| ! | AAAAGAGGATTATCTAATTC+CGG | + | chr3.3:40454582-40454601 | MS.gene22030:CDS | 25.0% |
| ! | AATATCAACAAAGCCAATTA+AGG | - | chr3.3:40456180-40456199 | None:intergenic | 25.0% |
| ! | AATATCGTTATGTTTAGTGT+TGG | - | chr3.3:40459062-40459081 | None:intergenic | 25.0% |
| ! | AATTATACAATGTCATTCGA+TGG | + | chr3.3:40458470-40458489 | MS.gene22030:intron | 25.0% |
| ! | AATTCAACACTAGGAATATA+TGG | - | chr3.3:40455110-40455129 | None:intergenic | 25.0% |
| ! | ACATAACGATATTGTACAAT+AGG | + | chr3.3:40459069-40459088 | MS.gene22030:intron | 25.0% |
| ! | AGAAAAAAAATAGAACTACG+TGG | + | chr3.3:40457009-40457028 | MS.gene22030:intron | 25.0% |
| ! | AGTTGTTACCTAAAGTTAAA+AGG | - | chr3.3:40458134-40458153 | None:intergenic | 25.0% |
| ! | ATGAAACTGAAGAAAGAAAA+TGG | - | chr3.3:40454459-40454478 | None:intergenic | 25.0% |
| ! | ATTATACAATGTCATTCGAT+GGG | + | chr3.3:40458471-40458490 | MS.gene22030:intron | 25.0% |
| ! | CATAACGATATTGTACAATA+GGG | + | chr3.3:40459070-40459089 | MS.gene22030:intron | 25.0% |
| ! | TAGAAATGCTTAGCATATAA+GGG | + | chr3.3:40457532-40457551 | MS.gene22030:intron | 25.0% |
| ! | TAGATTATGATGATTCCAAA+GGG | + | chr3.3:40457952-40457971 | MS.gene22030:intron | 25.0% |
| ! | TCCGAAAATAACAAATATAC+AGG | - | chr3.3:40457893-40457912 | None:intergenic | 25.0% |
| ! | TTAGAAATGCTTAGCATATA+AGG | + | chr3.3:40457531-40457550 | MS.gene22030:intron | 25.0% |
| ! | TTAGATTATGATGATTCCAA+AGG | + | chr3.3:40457951-40457970 | MS.gene22030:intron | 25.0% |
| ! | TTATAAACTGTTAGGAAACA+TGG | - | chr3.3:40456557-40456576 | None:intergenic | 25.0% |
| ! | TTCAGTGCACAAAATAATTA+AGG | + | chr3.3:40458835-40458854 | MS.gene22030:intron | 25.0% |
| ! | TTGGAATCATCATAATCTAA+TGG | - | chr3.3:40457951-40457970 | None:intergenic | 25.0% |
| !! | ATTTGGAGTTATCAATTTGT+TGG | + | chr3.3:40454881-40454900 | MS.gene22030:intron | 25.0% |
| !! | TATATTCCTAGTGTTGAATT+TGG | + | chr3.3:40455110-40455129 | MS.gene22030:intron | 25.0% |
| !! | TTTTACAAGAGTTTACTATC+TGG | + | chr3.3:40455160-40455179 | MS.gene22030:intron | 25.0% |
| !!! | ATAGTAGCATGTTATTTTTC+CGG | - | chr3.3:40456812-40456831 | None:intergenic | 25.0% |
| !!! | TACTTTCTGACTTGTTTTTT+GGG | + | chr3.3:40459817-40459836 | MS.gene22030:intron | 25.0% |
| !!! | TATTTGTTATGCTTCATTCT+TGG | + | chr3.3:40455699-40455718 | MS.gene22030:intron | 25.0% |
| !!! | TGGATATCATCATTGTTTTT+TGG | + | chr3.3:40456084-40456103 | MS.gene22030:intron | 25.0% |
| !!! | TGGTAGTTTTGAAGTTTTTT+TGG | + | chr3.3:40455267-40455286 | MS.gene22030:intron | 25.0% |
| !!! | TTAATTGGCTTTGTTGATAT+TGG | + | chr3.3:40456179-40456198 | MS.gene22030:intron | 25.0% |
| !!! | TTACTTTCTGACTTGTTTTT+TGG | + | chr3.3:40459816-40459835 | MS.gene22030:intron | 25.0% |
| !!! | TTATGGAGAATTTTTGATTC+TGG | + | chr3.3:40454819-40454838 | MS.gene22030:intron | 25.0% |
| !!! | TTGATTCTGGAATTTTTAGA+TGG | + | chr3.3:40454832-40454851 | MS.gene22030:intron | 25.0% |
| AAAGAGGATTATCTAATTCC+GGG | + | chr3.3:40454583-40454602 | MS.gene22030:CDS | 30.0% | |
| AATATATCAATCTGGGAATC+AGG | + | chr3.3:40459403-40459422 | MS.gene22030:CDS | 30.0% | |
| ACAAGAAAAAACCAAATGCA+AGG | - | chr3.3:40455962-40455981 | None:intergenic | 30.0% | |
| AGAAATGCTTAGCATATAAG+GGG | + | chr3.3:40457533-40457552 | MS.gene22030:intron | 30.0% | |
| ATATATGGTCTTTGTATGTG+GGG | + | chr3.3:40455203-40455222 | MS.gene22030:intron | 30.0% | |
| ATCCATCACGTATGAAAATA+CGG | - | chr3.3:40457405-40457424 | None:intergenic | 30.0% | |
| ATTTCACTGTCATATATGTG+AGG | + | chr3.3:40454958-40454977 | MS.gene22030:intron | 30.0% | |
| CAAAATCTCTCAAATTCTCT+AGG | - | chr3.3:40459789-40459808 | None:intergenic | 30.0% | |
| CAAGACCAATATATCAATCT+GGG | + | chr3.3:40459396-40459415 | MS.gene22030:CDS | 30.0% | |
| CACAGAAAATTGTACAAACT+AGG | - | chr3.3:40454777-40454796 | None:intergenic | 30.0% | |
| CAGTATATATGCATTGCATT+AGG | + | chr3.3:40457762-40457781 | MS.gene22030:intron | 30.0% | |
| CATATATGGTCTTTGTATGT+GGG | + | chr3.3:40455202-40455221 | MS.gene22030:intron | 30.0% | |
| CTAATGCAATGCATATATAC+TGG | - | chr3.3:40457764-40457783 | None:intergenic | 30.0% | |
| CTTGGTTATTGATGAGTATT+TGG | + | chr3.3:40455247-40455266 | MS.gene22030:intron | 30.0% | |
| CTTTAGGTAACAACTTTGTA+AGG | + | chr3.3:40458139-40458158 | MS.gene22030:intron | 30.0% | |
| GAACTTAGATGTTGAATACA+TGG | + | chr3.3:40455340-40455359 | MS.gene22030:intron | 30.0% | |
| GAGTAAATACAAAAGAGGAA+AGG | - | chr3.3:40456587-40456606 | None:intergenic | 30.0% | |
| GATCGTGTTTATAAACTGTT+AGG | - | chr3.3:40456565-40456584 | None:intergenic | 30.0% | |
| GTATTGAAACCAACAAATCT+AGG | - | chr3.3:40459462-40459481 | None:intergenic | 30.0% | |
| TAAACCAGGTTAATACGAAA+GGG | - | chr3.3:40456889-40456908 | None:intergenic | 30.0% | |
| TAAAGTTAAAAGGACTCCTA+AGG | - | chr3.3:40458124-40458143 | None:intergenic | 30.0% | |
| TAACTGTACAACACTACAAA+TGG | - | chr3.3:40458446-40458465 | None:intergenic | 30.0% | |
| TAGTTTAATGAAGGGAAAGA+TGG | - | chr3.3:40456628-40456647 | None:intergenic | 30.0% | |
| TATAATGCTCACAAGATTCT+TGG | + | chr3.3:40455229-40455248 | MS.gene22030:intron | 30.0% | |
| TATGCATCTTCAAAGTTGTT+TGG | + | chr3.3:40455137-40455156 | MS.gene22030:intron | 30.0% | |
| TATTCACCAAATTCAACACT+AGG | - | chr3.3:40455119-40455138 | None:intergenic | 30.0% | |
| TCAAGACCAATATATCAATC+TGG | + | chr3.3:40459395-40459414 | MS.gene22030:CDS | 30.0% | |
| TCTATTATGGTGACAATTGA+AGG | + | chr3.3:40455662-40455681 | MS.gene22030:intron | 30.0% | |
| TGATTCCCAGATTGATATAT+TGG | - | chr3.3:40459404-40459423 | None:intergenic | 30.0% | |
| TTAAACCAGGTTAATACGAA+AGG | - | chr3.3:40456890-40456909 | None:intergenic | 30.0% | |
| TTATACTTTCTGATCACTCT+AGG | + | chr3.3:40459698-40459717 | MS.gene22030:intron | 30.0% | |
| ! | ATCATATCTTTTTACACTGC+TGG | - | chr3.3:40459678-40459697 | None:intergenic | 30.0% |
| ! | CACTTTTGATACGAAAAAAG+AGG | + | chr3.3:40454567-40454586 | MS.gene22030:CDS | 30.0% |
| ! | CTAGAGAATTTGAGAGATTT+TGG | + | chr3.3:40459787-40459806 | MS.gene22030:intron | 30.0% |
| ! | CTTCCTTCATAATTGGTAAT+GGG | + | chr3.3:40455559-40455578 | MS.gene22030:intron | 30.0% |
| ! | GTTGCAATTTTCTGCATATA+TGG | + | chr3.3:40455188-40455207 | MS.gene22030:intron | 30.0% |
| ! | TGAACAAGGCAATTTTATCA+TGG | + | chr3.3:40455527-40455546 | MS.gene22030:intron | 30.0% |
| ! | TGTATCTTCTCATTTCAAGT+TGG | + | chr3.3:40456338-40456357 | MS.gene22030:intron | 30.0% |
| ! | TTGAATTGTCTTCCATTTTC+AGG | + | chr3.3:40459015-40459034 | MS.gene22030:intron | 30.0% |
| !! | ATTAGGTTGGCCAAAATATA+TGG | + | chr3.3:40458609-40458628 | MS.gene22030:intron | 30.0% |
| !! | CAATTGAAGGCTATTTTCTT+TGG | + | chr3.3:40455675-40455694 | MS.gene22030:intron | 30.0% |
| !! | TTCTACTTGTTTTCATACGT+GGG | + | chr3.3:40457818-40457837 | MS.gene22030:intron | 30.0% |
| !! | TTTCTACTTGTTTTCATACG+TGG | + | chr3.3:40457817-40457836 | MS.gene22030:intron | 30.0% |
| !!! | AAGGCATCACTTTTTATCTT+TGG | + | chr3.3:40455998-40456017 | MS.gene22030:intron | 30.0% |
| !!! | AATTTTTGGTGCTGAAAAAC+GGG | + | chr3.3:40458380-40458399 | MS.gene22030:intron | 30.0% |
| !!! | ACTTTTTATCTTTGGAACCT+TGG | + | chr3.3:40456006-40456025 | MS.gene22030:intron | 30.0% |
| !!! | CAATTTTTGGTGCTGAAAAA+CGG | + | chr3.3:40458379-40458398 | MS.gene22030:intron | 30.0% |
| !!! | CATTTGGTTTTTTCTTGTCT+CGG | + | chr3.3:40455964-40455983 | MS.gene22030:intron | 30.0% |
| !!! | CTCTGACCTTTATTTTGAAA+AGG | + | chr3.3:40458268-40458287 | MS.gene22030:intron | 30.0% |
| !!! | GAAAGAGAGTATTTTTATGG+TGG | - | chr3.3:40456726-40456745 | None:intergenic | 30.0% |
| !!! | GACAACCAAGTCATTTTTTA+TGG | + | chr3.3:40459839-40459858 | MS.gene22030:intron | 30.0% |
| !!! | TTAGGAGTCCTTTTAACTTT+AGG | + | chr3.3:40458123-40458142 | MS.gene22030:intron | 30.0% |
| AAAGAGCGAACAATTAAACC+AGG | - | chr3.3:40456903-40456922 | None:intergenic | 35.0% | |
| AAGCCCATTACCAATTATGA+AGG | - | chr3.3:40455565-40455584 | None:intergenic | 35.0% | |
| AAGTTCGTAGACTACATGTA+AGG | - | chr3.3:40457055-40457074 | None:intergenic | 35.0% | |
| ACAAACCAGAAGCAAACAAT+AGG | - | chr3.3:40455643-40455662 | None:intergenic | 35.0% | |
| ACAATGTATTCCAAAAGAGC+TGG | + | chr3.3:40459237-40459256 | MS.gene22030:CDS | 35.0% | |
| ACTGTCATATATGTGAGGAT+GGG | + | chr3.3:40454963-40454982 | MS.gene22030:intron | 35.0% | |
| AGCACAAGACAAGAAATACA+AGG | - | chr3.3:40456114-40456133 | None:intergenic | 35.0% | |
| ATCAGGAGTCAAATGAGAAA+AGG | + | chr3.3:40459420-40459439 | MS.gene22030:CDS | 35.0% | |
| ATGGTTTGAATGCATCAACA+TGG | + | chr3.3:40455741-40455760 | MS.gene22030:intron | 35.0% | |
| CAAAATGAAACTGAGACTTC+TGG | - | chr3.3:40459115-40459134 | None:intergenic | 35.0% | |
| CAATATCTGAATGGAATTCC+CGG | - | chr3.3:40454604-40454623 | None:intergenic | 35.0% | |
| CATATTGCAAGTGAGCTATA+TGG | - | chr3.3:40458652-40458671 | None:intergenic | 35.0% | |
| GAAGATACAAGTAAAGATGC+CGG | - | chr3.3:40456327-40456346 | None:intergenic | 35.0% | |
| GAATCAATTTCATGAACGAG+AGG | - | chr3.3:40454487-40454506 | None:intergenic | 35.0% | |
| GAGAGCAATGACAATAGAAT+AGG | - | chr3.3:40455081-40455100 | None:intergenic | 35.0% | |
| GATGGGAGTCAATATCTATA+TGG | + | chr3.3:40454980-40454999 | MS.gene22030:intron | 35.0% | |
| GCATATATGGTCTTTGTATG+TGG | + | chr3.3:40455201-40455220 | MS.gene22030:intron | 35.0% | |
| GCATTTAAATGGAATGGCTA+TGG | + | chr3.3:40457264-40457283 | MS.gene22030:intron | 35.0% | |
| GCTTCCTTCATAATTGGTAA+TGG | + | chr3.3:40455558-40455577 | MS.gene22030:intron | 35.0% | |
| GTCGATAGGAAAATAACCTT+AGG | + | chr3.3:40458105-40458124 | MS.gene22030:intron | 35.0% | |
| GTGTATGGTGTAAGATTGAA+AGG | + | chr3.3:40455456-40455475 | MS.gene22030:intron | 35.0% | |
| TAAAGATGCCGGAAATACAT+CGG | - | chr3.3:40456316-40456335 | None:intergenic | 35.0% | |
| TAGTCAGGATGAGATAAAGA+AGG | + | chr3.3:40454702-40454721 | MS.gene22030:CDS | 35.0% | |
| TATACTGGTGCATATGATTC+CGG | - | chr3.3:40457749-40457768 | None:intergenic | 35.0% | |
| TATTCCCCCCAATTTCTATT+AGG | + | chr3.3:40458592-40458611 | MS.gene22030:intron | 35.0% | |
| TCAGGAGTCAAATGAGAAAA+GGG | + | chr3.3:40459421-40459440 | MS.gene22030:CDS | 35.0% | |
| TGAAAGTTATCCCACTTATG+TGG | - | chr3.3:40456465-40456484 | None:intergenic | 35.0% | |
| TGATTTGAAGACACATCACA+TGG | + | chr3.3:40455776-40455795 | MS.gene22030:intron | 35.0% | |
| TGGATGATGCTTAATTTCCA+AGG | + | chr3.3:40457420-40457439 | MS.gene22030:intron | 35.0% | |
| TGGCCAACCTAATAGAAATT+GGG | - | chr3.3:40458602-40458621 | None:intergenic | 35.0% | |
| TGTTGATGCATTCAAACCAT+AGG | - | chr3.3:40455741-40455760 | None:intergenic | 35.0% | |
| TTGGCCAACCTAATAGAAAT+TGG | - | chr3.3:40458603-40458622 | None:intergenic | 35.0% | |
| TTTACAACAGACATCAGAGT+AGG | - | chr3.3:40459194-40459213 | None:intergenic | 35.0% | |
| TTTATGTAGCAGTGTAGTTC+TGG | + | chr3.3:40455364-40455383 | MS.gene22030:intron | 35.0% | |
| TTTCTTAGCCGATGTATTTC+CGG | + | chr3.3:40456305-40456324 | MS.gene22030:intron | 35.0% | |
| TTTGAGTCAACTTGTGTTCA+TGG | - | chr3.3:40459328-40459347 | None:intergenic | 35.0% | |
| ! | AATATACAGGAAGCATAGAC+AGG | - | chr3.3:40457880-40457899 | None:intergenic | 35.0% |
| ! | ATATACAGGAAGCATAGACA+GGG | - | chr3.3:40457879-40457898 | None:intergenic | 35.0% |
| ! | ATCGTTATGTTTAGTGTTGG+AGG | - | chr3.3:40459059-40459078 | None:intergenic | 35.0% |
| ! | CATGCATTTGATAGTAAACG+TGG | + | chr3.3:40457567-40457586 | MS.gene22030:intron | 35.0% |
| ! | GATATCCAAAAAGAAGTGCA+AGG | - | chr3.3:40456072-40456091 | None:intergenic | 35.0% |
| ! | GTCTTGATTTGAGAACAGTT+TGG | - | chr3.3:40459607-40459626 | None:intergenic | 35.0% |
| ! | GTTTGTACAATTTTCTGTGC+AGG | + | chr3.3:40454778-40454797 | MS.gene22030:intron | 35.0% |
| ! | TCGTTATGTTTAGTGTTGGA+GGG | - | chr3.3:40459058-40459077 | None:intergenic | 35.0% |
| ! | TTGCTTTCACGAAGTTTGTT+CGG | + | chr3.3:40454541-40454560 | MS.gene22030:CDS | 35.0% |
| ! | TTTCTGATCACTCTAGGAAT+TGG | + | chr3.3:40459704-40459723 | MS.gene22030:intron | 35.0% |
| ! | TTTTTGCGATTGTGCTCTAT+TGG | + | chr3.3:40454928-40454947 | MS.gene22030:intron | 35.0% |
| !! | ATGAATGGACTATTTCGTCT+TGG | + | chr3.3:40458018-40458037 | MS.gene22030:intron | 35.0% |
| !! | CACTTTTATCTTTGGAAGCT+TGG | + | chr3.3:40455860-40455879 | MS.gene22030:intron | 35.0% |
| !! | TCATGAAATTGATTCGTTCC+TGG | + | chr3.3:40454492-40454511 | MS.gene22030:CDS | 35.0% |
| !! | TGAATGGACTATTTCGTCTT+GGG | + | chr3.3:40458019-40458038 | MS.gene22030:intron | 35.0% |
| !! | TGCTTCTGGTTTGTCTATTA+TGG | + | chr3.3:40455649-40455668 | MS.gene22030:intron | 35.0% |
| !! | TTGTTGATATTGGCTTCTAC+CGG | + | chr3.3:40456189-40456208 | MS.gene22030:intron | 35.0% |
| !! | TTGTTGCTTCATGGTACTTT+TGG | + | chr3.3:40455885-40455904 | MS.gene22030:intron | 35.0% |
| !!! | AGAGAGTATTTTTATGGTGG+TGG | - | chr3.3:40456723-40456742 | None:intergenic | 35.0% |
| !!! | ATTTTTGGTGCTGAAAAACG+GGG | + | chr3.3:40458381-40458400 | MS.gene22030:intron | 35.0% |
| !!! | GCATTTGGTTTTTCTTGTCT+CGG | + | chr3.3:40455819-40455838 | MS.gene22030:intron | 35.0% |
| !!! | GTATTTTTATGGTGGTGGTT+TGG | - | chr3.3:40456718-40456737 | None:intergenic | 35.0% |
| !!! | TTCTTGGAAGCATTGGTTTT+TGG | + | chr3.3:40455715-40455734 | MS.gene22030:intron | 35.0% |
| AAAACCACATTATCCCGTAG+CGG | + | chr3.3:40457645-40457664 | MS.gene22030:intron | 40.0% | |
| AACATGGCATCCATTGATGA+AGG | - | chr3.3:40456541-40456560 | None:intergenic | 40.0% | |
| AACCAGGATCAAGGTTTCAA+AGG | - | chr3.3:40455293-40455312 | None:intergenic | 40.0% | |
| AACTGCAGAGACAATATTGC+CGG | - | chr3.3:40455042-40455061 | None:intergenic | 40.0% | |
| AAGATTCAGCATTAGCTGCA+CGG | - | chr3.3:40459576-40459595 | None:intergenic | 40.0% | |
| AAGTTATCCCACTTATGTGG+AGG | - | chr3.3:40456462-40456481 | None:intergenic | 40.0% | |
| ACAACGCTTAACCATCAAGA+GGG | - | chr3.3:40456156-40456175 | None:intergenic | 40.0% | |
| ACATGGCTATGCATCTCTAT+TGG | + | chr3.3:40455793-40455812 | MS.gene22030:intron | 40.0% | |
| ACGAAATAGTCCATTCATCC+GGG | - | chr3.3:40458016-40458035 | None:intergenic | 40.0% | |
| ACGTGGATGAAAGTAAGACA+AGG | - | chr3.3:40458418-40458437 | None:intergenic | 40.0% | |
| AGGTTGAACCAATTGAAGGA+AGG | - | chr3.3:40456242-40456261 | None:intergenic | 40.0% | |
| ATTGGGGGGAATAAAAGAGA+AGG | - | chr3.3:40458585-40458604 | None:intergenic | 40.0% | |
| CACAGAATGCAAGGAAATTC+TGG | + | chr3.3:40458721-40458740 | MS.gene22030:CDS | 40.0% | |
| CACTACAAATGGAAGAAACG+TGG | - | chr3.3:40458435-40458454 | None:intergenic | 40.0% | |
| CACTGTCATATATGTGAGGA+TGG | + | chr3.3:40454962-40454981 | MS.gene22030:intron | 40.0% | |
| CAGGTTAATACGAAAGGGAA+TGG | - | chr3.3:40456884-40456903 | None:intergenic | 40.0% | |
| CATTCCCTTTCGTATTAACC+TGG | + | chr3.3:40456882-40456901 | MS.gene22030:intron | 40.0% | |
| CATTTGCTCTGCATGCTATA+AGG | + | chr3.3:40459286-40459305 | MS.gene22030:CDS | 40.0% | |
| CCAAAATATATGGCCTACCA+GGG | + | chr3.3:40458619-40458638 | MS.gene22030:CDS | 40.0% | |
| CCAACCTAATAGAAATTGGG+GGG | - | chr3.3:40458599-40458618 | None:intergenic | 40.0% | |
| CCGATAATAGTTTCGTTCAG+CGG | - | chr3.3:40454659-40454678 | None:intergenic | 40.0% | |
| CCGCTGAACGAAACTATTAT+CGG | + | chr3.3:40454656-40454675 | MS.gene22030:CDS | 40.0% | |
| CTATGACTCTTCCTTGCATT+TGG | + | chr3.3:40455948-40455967 | MS.gene22030:intron | 40.0% | |
| CTCAAGGTTGAACCAATTGA+AGG | - | chr3.3:40456246-40456265 | None:intergenic | 40.0% | |
| CTTATAGCATGCAGAGCAAA+TGG | - | chr3.3:40459288-40459307 | None:intergenic | 40.0% | |
| GAATGGCTATGGATTCTTGA+GGG | + | chr3.3:40457275-40457294 | MS.gene22030:intron | 40.0% | |
| GACAGGGCAAACATTATATG+CGG | - | chr3.3:40457863-40457882 | None:intergenic | 40.0% | |
| GACGAAATAGTCCATTCATC+CGG | - | chr3.3:40458017-40458036 | None:intergenic | 40.0% | |
| GAGTCATAGTCAACAATGGA+AGG | - | chr3.3:40455937-40455956 | None:intergenic | 40.0% | |
| GATGAGAAGAGAAGAATTCC+AGG | - | chr3.3:40454513-40454532 | None:intergenic | 40.0% | |
| GCATGTGCTTCCTTCATAAT+TGG | + | chr3.3:40455552-40455571 | MS.gene22030:intron | 40.0% | |
| GCCAACCTAATAGAAATTGG+GGG | - | chr3.3:40458600-40458619 | None:intergenic | 40.0% | |
| GGAAGAGTCATAGTCAACAA+TGG | - | chr3.3:40455941-40455960 | None:intergenic | 40.0% | |
| GGAATTCTCAACTAGCTGAA+TGG | - | chr3.3:40455594-40455613 | None:intergenic | 40.0% | |
| GGCCAACCTAATAGAAATTG+GGG | - | chr3.3:40458601-40458620 | None:intergenic | 40.0% | |
| GTAGATACTCATCTCCTTAG+TGG | + | chr3.3:40457689-40457708 | MS.gene22030:intron | 40.0% | |
| TAGGATTGTGTAGATGGTAG+AGG | - | chr3.3:40459175-40459194 | None:intergenic | 40.0% | |
| TATAAGGGAATGCTTTGCTC+AGG | + | chr3.3:40457318-40457337 | MS.gene22030:intron | 40.0% | |
| TCAACATCTAAGTTCACGTG+AGG | - | chr3.3:40455335-40455354 | None:intergenic | 40.0% | |
| TCAGAGTAGGATTGTGTAGA+TGG | - | chr3.3:40459181-40459200 | None:intergenic | 40.0% | |
| TCATAGTCAACAATGGAAGG+AGG | - | chr3.3:40455934-40455953 | None:intergenic | 40.0% | |
| TCATTAGGATGACCTTACTC+CGG | + | chr3.3:40456775-40456794 | MS.gene22030:intron | 40.0% | |
| TCTGCATGCTATAAGGATAG+AGG | + | chr3.3:40459293-40459312 | MS.gene22030:CDS | 40.0% | |
| TGTTGCTGAAAAAGCTAGTC+AGG | + | chr3.3:40454687-40454706 | MS.gene22030:CDS | 40.0% | |
| TTCAGCCTATTGTTTGCTTC+TGG | + | chr3.3:40455635-40455654 | MS.gene22030:intron | 40.0% | |
| TTGAACACCTTCCAACTTGA+GGG | + | chr3.3:40456369-40456388 | MS.gene22030:intron | 40.0% | |
| TTGATGCTCCTTCCTTCAAT+TGG | + | chr3.3:40456231-40456250 | MS.gene22030:intron | 40.0% | |
| TTTGAACACCTTCCAACTTG+AGG | + | chr3.3:40456368-40456387 | MS.gene22030:intron | 40.0% | |
| ! | AATGAAGGGAAAGATGGACT+AGG | - | chr3.3:40456622-40456641 | None:intergenic | 40.0% |
| ! | ACTCGATTATGGAGGTACAA+GGG | + | chr3.3:40454731-40454750 | MS.gene22030:intron | 40.0% |
| ! | AGCTATATGGAAGTTTTCCC+TGG | - | chr3.3:40458639-40458658 | None:intergenic | 40.0% |
| ! | ATATGGAAGTTTTCCCTGGT+AGG | - | chr3.3:40458635-40458654 | None:intergenic | 40.0% |
| ! | ATTGGTTCAACCTTGAGTTG+TGG | + | chr3.3:40456249-40456268 | MS.gene22030:intron | 40.0% |
| ! | CGTTATGTTTAGTGTTGGAG+GGG | - | chr3.3:40459057-40459076 | None:intergenic | 40.0% |
| ! | CTCCGTATTTTCATACGTGA+TGG | + | chr3.3:40457400-40457419 | MS.gene22030:intron | 40.0% |
| ! | CTCTAGGAATTGGAAAGACT+CGG | + | chr3.3:40459714-40459733 | MS.gene22030:intron | 40.0% |
| ! | CTCTTCCTTGCACTTCTTTT+TGG | + | chr3.3:40456064-40456083 | MS.gene22030:intron | 40.0% |
| ! | GCTTTTCTCTCCTTCATCAA+TGG | + | chr3.3:40456528-40456547 | MS.gene22030:intron | 40.0% |
| ! | GTTAAGCGTTGTGCCTTAAT+TGG | + | chr3.3:40456164-40456183 | MS.gene22030:intron | 40.0% |
| ! | TCTCACATTTCCAGCTCTTT+TGG | - | chr3.3:40459250-40459269 | None:intergenic | 40.0% |
| ! | TGCTTCATTCTTGGAAGCAT+TGG | + | chr3.3:40455708-40455727 | MS.gene22030:intron | 40.0% |
| ! | TTTCCTATCGACTATGTGAG+TGG | - | chr3.3:40458097-40458116 | None:intergenic | 40.0% |
| ! | TTTGAAACCTTGATCCTGGT+TGG | + | chr3.3:40455292-40455311 | MS.gene22030:intron | 40.0% |
| !! | ATGAAGGGAAAGATGGACTA+GGG | - | chr3.3:40456621-40456640 | None:intergenic | 40.0% |
| !! | CATCTCTATTGGCTTGCATT+TGG | + | chr3.3:40455804-40455823 | MS.gene22030:intron | 40.0% |
| !! | CTATGTGGCTTTGTTGAACA+AGG | + | chr3.3:40455513-40455532 | MS.gene22030:intron | 40.0% |
| !! | GAATGGACTATTTCGTCTTG+GGG | + | chr3.3:40458020-40458039 | MS.gene22030:intron | 40.0% |
| !! | GTTTTAGCCATCCATCATTG+TGG | + | chr3.3:40455400-40455419 | MS.gene22030:intron | 40.0% |
| !!! | AAGCATTGGTTTTTGGCCTA+TGG | + | chr3.3:40455722-40455741 | MS.gene22030:intron | 40.0% |
| !!! | AGCATGTTATTTTTCCGGCA+TGG | - | chr3.3:40456807-40456826 | None:intergenic | 40.0% |
| !!! | AGCTTTTGGAAAAGTGCCTT+AGG | - | chr3.3:40455427-40455446 | None:intergenic | 40.0% |
| !!! | ATGTTATTTTTCCGGCATGG+TGG | - | chr3.3:40456804-40456823 | None:intergenic | 40.0% |
| !!! | GAGGGCATCACTTTTATCTT+TGG | + | chr3.3:40455852-40455871 | MS.gene22030:intron | 40.0% |
| AATTAATACCGCTCCGCAGA+GGG | - | chr3.3:40457726-40457745 | None:intergenic | 45.0% | |
| ACACTTACATCCCTACACAG+AGG | - | chr3.3:40458207-40458226 | None:intergenic | 45.0% | |
| ACTATAGGCACTAACCAACC+AGG | - | chr3.3:40455309-40455328 | None:intergenic | 45.0% | |
| AGACCACTCACATAGTCGAT+AGG | + | chr3.3:40458091-40458110 | MS.gene22030:intron | 45.0% | |
| AGCCCACATATCCACTGAAA+GGG | - | chr3.3:40457923-40457942 | None:intergenic | 45.0% | |
| AGGAAATTCTCCCTCTGTGT+AGG | + | chr3.3:40458193-40458212 | MS.gene22030:intron | 45.0% | |
| AGGTGTAACCTCCACATAAG+TGG | + | chr3.3:40456451-40456470 | MS.gene22030:intron | 45.0% | |
| CAAGAAGCAACCACAACTCA+AGG | - | chr3.3:40456262-40456281 | None:intergenic | 45.0% | |
| CACAACGCTTAACCATCAAG+AGG | - | chr3.3:40456157-40456176 | None:intergenic | 45.0% | |
| CACATAGCCTTCAAGTGCAT+AGG | - | chr3.3:40455500-40455519 | None:intergenic | 45.0% | |
| CACTTACATCCCTACACAGA+GGG | - | chr3.3:40458206-40458225 | None:intergenic | 45.0% | |
| CAGGATAGATCACGTTCAAG+GGG | + | chr3.3:40458058-40458077 | MS.gene22030:intron | 45.0% | |
| CATCAACAACGGCCTGAAAA+TGG | - | chr3.3:40459030-40459049 | None:intergenic | 45.0% | |
| CATCCATCATTGTGGACCTA+AGG | + | chr3.3:40455408-40455427 | MS.gene22030:intron | 45.0% | |
| CCATAGTCTACAATGGAAGG+AGG | - | chr3.3:40456044-40456063 | None:intergenic | 45.0% | |
| CCCCCCAATTTCTATTAGGT+TGG | + | chr3.3:40458596-40458615 | MS.gene22030:intron | 45.0% | |
| CCTCCTTCCATTGTAGACTA+TGG | + | chr3.3:40456041-40456060 | MS.gene22030:intron | 45.0% | |
| CGAAATAGTCCATTCATCCG+GGG | - | chr3.3:40458015-40458034 | None:intergenic | 45.0% | |
| CGAGTTGCATACACTTTGTC+AGG | + | chr3.3:40458929-40458948 | MS.gene22030:CDS | 45.0% | |
| CTATGCACTTGAAGGCTATG+TGG | + | chr3.3:40455498-40455517 | MS.gene22030:intron | 45.0% | |
| CTTGTACCTCCATAATCGAG+TGG | - | chr3.3:40454732-40454751 | None:intergenic | 45.0% | |
| GAAAGTGACAAAGCAGTCGT+TGG | + | chr3.3:40459955-40459974 | MS.gene22030:CDS | 45.0% | |
| GACCATCATCGAGGAATACT+TGG | - | chr3.3:40459153-40459172 | None:intergenic | 45.0% | |
| GACCCTTTCAGTGGATATGT+GGG | + | chr3.3:40457918-40457937 | MS.gene22030:intron | 45.0% | |
| GAGCCATAGTCTACAATGGA+AGG | - | chr3.3:40456047-40456066 | None:intergenic | 45.0% | |
| GAGTGATTACACCCTCTTGA+TGG | + | chr3.3:40456142-40456161 | MS.gene22030:intron | 45.0% | |
| GAGTTGTGGTTGCTTCTTGT+TGG | + | chr3.3:40456263-40456282 | MS.gene22030:intron | 45.0% | |
| GCAGGATAGATCACGTTCAA+GGG | + | chr3.3:40458057-40458076 | MS.gene22030:intron | 45.0% | |
| GCCAAAATATATGGCCTACC+AGG | + | chr3.3:40458618-40458637 | MS.gene22030:CDS | 45.0% | |
| GGAAATTCTCCCTCTGTGTA+GGG | + | chr3.3:40458194-40458213 | MS.gene22030:intron | 45.0% | |
| GGAAGAGCCATAGTCTACAA+TGG | - | chr3.3:40456051-40456070 | None:intergenic | 45.0% | |
| GGAATGGCTATGGATTCTTG+AGG | + | chr3.3:40457274-40457293 | MS.gene22030:intron | 45.0% | |
| GGAGGGGATATCATCAACAA+CGG | - | chr3.3:40459041-40459060 | None:intergenic | 45.0% | |
| GGAGGTCATATACAAGACCA+AGG | - | chr3.3:40456026-40456045 | None:intergenic | 45.0% | |
| GGTGCGAAATTCGAGTGAAT+CGG | + | chr3.3:40459647-40459666 | MS.gene22030:CDS | 45.0% | |
| GGTGTAACCTCCACATAAGT+GGG | + | chr3.3:40456452-40456471 | MS.gene22030:intron | 45.0% | |
| GTGCGAAATTCGAGTGAATC+GGG | + | chr3.3:40459648-40459667 | MS.gene22030:CDS | 45.0% | |
| GTTCACGTGAGGTTCACTAT+AGG | - | chr3.3:40455324-40455343 | None:intergenic | 45.0% | |
| TAGCCCACATATCCACTGAA+AGG | - | chr3.3:40457924-40457943 | None:intergenic | 45.0% | |
| TCACGTTGTTATCGCCGTAT+CGG | + | chr3.3:40454431-40454450 | MS.gene22030:CDS | 45.0% | |
| TCAGACTCAATGATCCGCTA+CGG | - | chr3.3:40457662-40457681 | None:intergenic | 45.0% | |
| TCCCAGACACTATCACTTCA+CGG | - | chr3.3:40458688-40458707 | None:intergenic | 45.0% | |
| TCTAATAGTCCCCCTCAAGT+TGG | - | chr3.3:40456383-40456402 | None:intergenic | 45.0% | |
| TCTCTCTCCTATGCACTTGA+AGG | + | chr3.3:40455490-40455509 | MS.gene22030:intron | 45.0% | |
| TGAACACCTTCCAACTTGAG+GGG | + | chr3.3:40456370-40456389 | MS.gene22030:intron | 45.0% | |
| TGACCCTTTCAGTGGATATG+TGG | + | chr3.3:40457917-40457936 | MS.gene22030:intron | 45.0% | |
| TGCCAAGTATTCCTCGATGA+TGG | + | chr3.3:40459148-40459167 | MS.gene22030:CDS | 45.0% | |
| TGCGAAATTCGAGTGAATCG+GGG | + | chr3.3:40459649-40459668 | MS.gene22030:CDS | 45.0% | |
| TGTCTCTGCAGTTCAGTCTT+TGG | + | chr3.3:40455049-40455068 | MS.gene22030:intron | 45.0% | |
| ! | CACTCGATTATGGAGGTACA+AGG | + | chr3.3:40454730-40454749 | MS.gene22030:intron | 45.0% |
| ! | CCCTGGTAGGCCATATATTT+TGG | - | chr3.3:40458622-40458641 | None:intergenic | 45.0% |
| ! | CTTAGGTCCACAATGATGGA+TGG | - | chr3.3:40455410-40455429 | None:intergenic | 45.0% |
| ! | TGGTTTTTCTTGTCTCGGCT+TGG | + | chr3.3:40455824-40455843 | MS.gene22030:intron | 45.0% |
| !! | AGCTTGGTCTTGTTGCTTCA+TGG | + | chr3.3:40455876-40455895 | MS.gene22030:intron | 45.0% |
| !! | AGGAAATTCTGGAGTGCGAA+AGG | + | chr3.3:40458732-40458751 | MS.gene22030:CDS | 45.0% |
| !! | CTTGCTGACTTACACACAGA+TGG | + | chr3.3:40459513-40459532 | MS.gene22030:intron | 45.0% |
| !! | GAAAGAAAATGGCGCCGATA+CGG | - | chr3.3:40454448-40454467 | None:intergenic | 45.0% |
| !! | GAAGGCATTCCACTCGATTA+TGG | + | chr3.3:40454720-40454739 | MS.gene22030:CDS | 45.0% |
| !! | TGATATTGGCTTCTACCGGA+TGG | + | chr3.3:40456193-40456212 | MS.gene22030:intron | 45.0% |
| !!! | GGTTTTTTCTTGTCTCGGCT+CGG | + | chr3.3:40455969-40455988 | MS.gene22030:intron | 45.0% |
| !! | AAAGAAAAAAAATAAATATA+TGG | + | chr3.3:40456670-40456689 | MS.gene22030:intron | 5.0% |
| AATAGTCCATTCATCCGGGG+AGG | - | chr3.3:40458012-40458031 | None:intergenic | 50.0% | |
| ACTCGGAGTGTAGCATTCCA+CGG | + | chr3.3:40459731-40459750 | MS.gene22030:intron | 50.0% | |
| AGCAACGCTTAACCACCATC+CGG | - | chr3.3:40456211-40456230 | None:intergenic | 50.0% | |
| ATGGTAGAGGACCATCATCG+AGG | - | chr3.3:40459162-40459181 | None:intergenic | 50.0% | |
| CACTCGAATTTCGCACCTAC+TGG | - | chr3.3:40459644-40459663 | None:intergenic | 50.0% | |
| CAGACTCAATGATCCGCTAC+GGG | - | chr3.3:40457661-40457680 | None:intergenic | 50.0% | |
| CGCAGGATAGATCACGTTCA+AGG | + | chr3.3:40458056-40458075 | MS.gene22030:intron | 50.0% | |
| CGGCAACTAGAGCTTCACAA+CGG | - | chr3.3:40455022-40455041 | None:intergenic | 50.0% | |
| CGTTGTTCTCTCATGCCAGT+AGG | + | chr3.3:40459626-40459645 | MS.gene22030:CDS | 50.0% | |
| CTGCGGAGCGGTATTAATTC+CGG | + | chr3.3:40457727-40457746 | MS.gene22030:intron | 50.0% | |
| CTGGGTGTGCATCAGAACTA+TGG | - | chr3.3:40458899-40458918 | None:intergenic | 50.0% | |
| GAACACCTTCCAACTTGAGG+GGG | + | chr3.3:40456371-40456390 | MS.gene22030:intron | 50.0% | |
| GAATTAATACCGCTCCGCAG+AGG | - | chr3.3:40457727-40457746 | None:intergenic | 50.0% | |
| GCACTAACCAACCAGGATCA+AGG | - | chr3.3:40455302-40455321 | None:intergenic | 50.0% | |
| GGAATGCTTTGCTCAGGCAA+GGG | + | chr3.3:40457324-40457343 | MS.gene22030:intron | 50.0% | |
| GGCATTCCACTCGATTATGG+AGG | + | chr3.3:40454723-40454742 | MS.gene22030:CDS | 50.0% | |
| GGGGATTTGACTAAGTTCGC+AGG | + | chr3.3:40458039-40458058 | MS.gene22030:intron | 50.0% | |
| GTGCCTTAGGTCCACAATGA+TGG | - | chr3.3:40455414-40455433 | None:intergenic | 50.0% | |
| TCGAGGAATACTTGGCACGA+CGG | - | chr3.3:40459145-40459164 | None:intergenic | 50.0% | |
| TGATCCGCTACGGGATAATG+TGG | - | chr3.3:40457652-40457671 | None:intergenic | 50.0% | |
| ! | CGTTGTGAAGCTCTAGTTGC+CGG | + | chr3.3:40455020-40455039 | MS.gene22030:intron | 50.0% |
| ! | GCCGTGAAGTGATAGTGTCT+GGG | + | chr3.3:40458684-40458703 | MS.gene22030:CDS | 50.0% |
| ! | TGATAGTGTCTGGGAAGCGA+TGG | + | chr3.3:40458693-40458712 | MS.gene22030:CDS | 50.0% |
| ! | TGCCGTGAAGTGATAGTGTC+TGG | + | chr3.3:40458683-40458702 | MS.gene22030:CDS | 50.0% |
| !! | ATAGTCCCCCTCAAGTTGGA+AGG | - | chr3.3:40456379-40456398 | None:intergenic | 50.0% |
| !! | GGCCTTTGAAACCTTGATCC+TGG | + | chr3.3:40455288-40455307 | MS.gene22030:intron | 50.0% |
| !! | TATTGGCTTCTACCGGATGG+TGG | + | chr3.3:40456196-40456215 | MS.gene22030:intron | 50.0% |
| !! | TTCTTGTCTCGGCTTGGCAT+AGG | + | chr3.3:40455830-40455849 | MS.gene22030:intron | 50.0% |
| AGATGACGATTCCACCTCCC+CGG | + | chr3.3:40457995-40458014 | MS.gene22030:intron | 55.0% | |
| AGTAAACGTGGCCACCAGAG+AGG | + | chr3.3:40457579-40457598 | MS.gene22030:intron | 55.0% | |
| AGTGTAGCATTCCACGGTGC+AGG | + | chr3.3:40459737-40459756 | MS.gene22030:intron | 55.0% | |
| ATAACAGCACACCTGCACCG+TGG | - | chr3.3:40459751-40459770 | None:intergenic | 55.0% | |
| ATTCCACCTCCCCGGATGAA+TGG | + | chr3.3:40458003-40458022 | MS.gene22030:intron | 55.0% | |
| CGGATTCGTGACCCTTTCAG+TGG | + | chr3.3:40457909-40457928 | MS.gene22030:intron | 55.0% | |
| GATGCACACCCAGCGAAGAA+TGG | + | chr3.3:40458906-40458925 | MS.gene22030:CDS | 55.0% | |
| GCAACTCGCCATTCTTCGCT+GGG | - | chr3.3:40458917-40458936 | None:intergenic | 55.0% | |
| GCAGAGCAAATGGTGCACTC+TGG | - | chr3.3:40459278-40459297 | None:intergenic | 55.0% | |
| GGGAATGCTTTGCTCAGGCA+AGG | + | chr3.3:40457323-40457342 | MS.gene22030:intron | 55.0% | |
| TGCAACTCGCCATTCTTCGC+TGG | - | chr3.3:40458918-40458937 | None:intergenic | 55.0% | |
| ! | TTTTCCGGCATGGTGGTCAC+CGG | - | chr3.3:40456797-40456816 | None:intergenic | 55.0% |
| !! | TGTCTCGGCTTGGCATAGGA+GGG | + | chr3.3:40455834-40455853 | MS.gene22030:intron | 55.0% |
| !! | TTCTTGTCTCGGCTCGGCAT+TGG | + | chr3.3:40455975-40455994 | MS.gene22030:intron | 55.0% |
| !! | TTGTCTCGGCTTGGCATAGG+AGG | + | chr3.3:40455833-40455852 | MS.gene22030:intron | 55.0% |
| ACCTCGTGACTCCTCTCTGG+TGG | - | chr3.3:40457593-40457612 | None:intergenic | 60.0% | |
| AGGAGTCACGAGGTGCACAC+CGG | + | chr3.3:40457599-40457618 | MS.gene22030:intron | 60.0% | |
| AGTCCATTCATCCGGGGAGG+TGG | - | chr3.3:40458009-40458028 | None:intergenic | 60.0% | |
| CAAAGGGAGCCGAGCTACCA+CGG | + | chr3.3:40457968-40457987 | MS.gene22030:intron | 60.0% | |
| CATCTTCCGCCGTGGTAGCT+CGG | - | chr3.3:40457980-40457999 | None:intergenic | 60.0% | |
| GCATGGTGGTCACCGGAGTA+AGG | - | chr3.3:40456790-40456809 | None:intergenic | 60.0% | |
| GGAATCGTCATCTTCCGCCG+TGG | - | chr3.3:40457988-40458007 | None:intergenic | 60.0% | |
| TACTCCGGTGACCACCATGC+CGG | + | chr3.3:40456790-40456809 | MS.gene22030:intron | 60.0% | |
| TGCACCTCGTGACTCCTCTC+TGG | - | chr3.3:40457596-40457615 | None:intergenic | 60.0% | |
| !! | TGTCTCGGCTCGGCATTGGA+AGG | + | chr3.3:40455979-40455998 | MS.gene22030:intron | 60.0% |
| CGTGGTAGCTCGGCTCCCTT+TGG | - | chr3.3:40457970-40457989 | None:intergenic | 65.0% | |
| GACCACAACCCTCTGCGGAG+CGG | + | chr3.3:40457715-40457734 | MS.gene22030:intron | 65.0% | |
| GCCACCAGAGAGGAGTCACG+AGG | + | chr3.3:40457589-40457608 | MS.gene22030:intron | 65.0% | |
| GGGTTGTGGTCGCGCCACTA+AGG | - | chr3.3:40457706-40457725 | None:intergenic | 65.0% | |
| TACCGCTCCGCAGAGGGTTG+TGG | - | chr3.3:40457720-40457739 | None:intergenic | 65.0% | |
| TCACGAGGTGCACACCGGAG+AGG | + | chr3.3:40457604-40457623 | MS.gene22030:intron | 65.0% | |
| TGCACACCGGAGAGGTGGCA+CGG | + | chr3.3:40457612-40457631 | MS.gene22030:intron | 65.0% | |
| AGGGAGCCGAGCTACCACGG+CGG | + | chr3.3:40457971-40457990 | MS.gene22030:intron | 70.0% | |
| CACACCGGAGAGGTGGCACG+GGG | + | chr3.3:40457614-40457633 | MS.gene22030:intron | 70.0% | |
| CGAGGTGCACACCGGAGAGG+TGG | + | chr3.3:40457607-40457626 | MS.gene22030:intron | 70.0% | |
| GCACACCGGAGAGGTGGCAC+GGG | + | chr3.3:40457613-40457632 | MS.gene22030:intron | 70.0% | |
| GGCGCGACCACAACCCTCTG+CGG | + | chr3.3:40457710-40457729 | MS.gene22030:intron | 70.0% | |
| CGCACCCCGTGCCACCTCTC+CGG | - | chr3.3:40457621-40457640 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 40454421 | 40459994 | 40454421 | ID=MS.gene22030 |
| chr3.3 | mRNA | 40454421 | 40459994 | 40454421 | ID=MS.gene22030.t1;Parent=MS.gene22030 |
| chr3.3 | exon | 40454421 | 40454744 | 40454421 | ID=MS.gene22030.t1.exon1;Parent=MS.gene22030.t1 |
| chr3.3 | CDS | 40454421 | 40454744 | 40454421 | ID=cds.MS.gene22030.t1;Parent=MS.gene22030.t1 |
| chr3.3 | exon | 40458614 | 40458753 | 40458614 | ID=MS.gene22030.t1.exon2;Parent=MS.gene22030.t1 |
| chr3.3 | CDS | 40458614 | 40458753 | 40458614 | ID=cds.MS.gene22030.t1;Parent=MS.gene22030.t1 |
| chr3.3 | exon | 40458893 | 40458950 | 40458893 | ID=MS.gene22030.t1.exon3;Parent=MS.gene22030.t1 |
| chr3.3 | CDS | 40458893 | 40458950 | 40458893 | ID=cds.MS.gene22030.t1;Parent=MS.gene22030.t1 |
| chr3.3 | exon | 40459116 | 40459442 | 40459116 | ID=MS.gene22030.t1.exon4;Parent=MS.gene22030.t1 |
| chr3.3 | CDS | 40459116 | 40459442 | 40459116 | ID=cds.MS.gene22030.t1;Parent=MS.gene22030.t1 |
| chr3.3 | exon | 40459532 | 40459680 | 40459532 | ID=MS.gene22030.t1.exon5;Parent=MS.gene22030.t1 |
| chr3.3 | CDS | 40459532 | 40459680 | 40459532 | ID=cds.MS.gene22030.t1;Parent=MS.gene22030.t1 |
| chr3.3 | exon | 40459913 | 40459994 | 40459913 | ID=MS.gene22030.t1.exon6;Parent=MS.gene22030.t1 |
| chr3.3 | CDS | 40459913 | 40459994 | 40459913 | ID=cds.MS.gene22030.t1;Parent=MS.gene22030.t1 |
| Gene Sequence |
| Protein sequence |
