Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22260.t1 | XP_013459518.1 | 90.5 | 524 | 33 | 2 | 1 | 524 | 1 | 507 | 6.50E-265 | 922.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22260.t1 | F4HY56 | 29.3 | 239 | 117 | 6 | 8 | 244 | 27 | 215 | 2.8e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22260.t1 | A0A072UUN9 | 90.5 | 524 | 33 | 2 | 1 | 524 | 1 | 507 | 4.7e-265 | 922.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22260.t1 | TF | HB-other |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22260.t1 | MTR_3g045830 | 90.458 | 524 | 33 | 2 | 1 | 524 | 1 | 507 | 0.0 | 949 |
| MS.gene22260.t1 | MTR_5g089870 | 58.000 | 550 | 197 | 8 | 1 | 523 | 1 | 543 | 0.0 | 565 |
| MS.gene22260.t1 | MTR_4g088375 | 49.231 | 65 | 31 | 1 | 13 | 75 | 24 | 88 | 3.75e-12 | 69.7 |
| MS.gene22260.t1 | MTR_4g088375 | 49.231 | 65 | 31 | 1 | 13 | 75 | 24 | 88 | 3.82e-12 | 69.7 |
| MS.gene22260.t1 | MTR_4g088375 | 49.231 | 65 | 31 | 1 | 13 | 75 | 24 | 88 | 3.93e-12 | 69.7 |
| MS.gene22260.t1 | MTR_2g014490 | 50.909 | 55 | 27 | 0 | 21 | 75 | 43 | 97 | 1.30e-11 | 68.2 |
| MS.gene22260.t1 | MTR_2g014490 | 50.909 | 55 | 27 | 0 | 21 | 75 | 43 | 97 | 1.31e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22260.t1 | AT4G03250 | 38.828 | 546 | 260 | 21 | 6 | 523 | 7 | 506 | 1.94e-73 | 242 |
| MS.gene22260.t1 | AT1G28420 | 54.545 | 55 | 25 | 0 | 21 | 75 | 42 | 96 | 3.88e-13 | 73.2 |
| MS.gene22260.t1 | AT5G44180 | 49.153 | 59 | 30 | 0 | 17 | 75 | 16 | 74 | 4.61e-12 | 69.7 |
| MS.gene22260.t1 | AT5G44180 | 49.153 | 59 | 30 | 0 | 17 | 75 | 16 | 74 | 5.10e-12 | 69.3 |
| MS.gene22260.t1 | AT5G44180 | 49.153 | 59 | 30 | 0 | 17 | 75 | 16 | 74 | 5.10e-12 | 69.3 |
Find 127 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAACTTTCCTGTGGATT+TGG | 0.227435 | 3.4:+38520925 | MS.gene22260:CDS |
| CAAACTGCAAATCCAGTTAA+TGG | 0.227706 | 3.4:+38519442 | MS.gene22260:CDS |
| GCATAATTCTCGAATTTCTA+TGG | 0.231441 | 3.4:+38521186 | MS.gene22260:CDS |
| CACCTTCCATTTGTAAATCT+TGG | 0.234276 | 3.4:-38520790 | None:intergenic |
| CTTGCATGATTCTGATTTCC+AGG | 0.289398 | 3.4:+38520826 | MS.gene22260:CDS |
| TTTAGACACGATTGCCTGTT+TGG | 0.320667 | 3.4:-38520235 | None:intergenic |
| ACCATGACTCTCAACCTCTT+TGG | 0.325414 | 3.4:-38519059 | None:intergenic |
| CAAGACCGTGTCAGTGGACT+AGG | 0.327708 | 3.4:+38518986 | MS.gene22260:CDS |
| GGCAAATGATTGGTATGAAT+TGG | 0.347033 | 3.4:-38520899 | None:intergenic |
| TTAGACACGATTGCCTGTTT+GGG | 0.351618 | 3.4:-38520234 | None:intergenic |
| TAAAACCCCTGCACAGCTTA+TGG | 0.357510 | 3.4:+38518536 | MS.gene22260:CDS |
| ATAGTAAACCTACCATTAAC+TGG | 0.358625 | 3.4:-38519454 | None:intergenic |
| TTTGGTGTTACGTGTCTATA+AGG | 0.369262 | 3.4:-38519238 | None:intergenic |
| ACCTTCCATTTGTAAATCTT+GGG | 0.373107 | 3.4:-38520789 | None:intergenic |
| CTGTTTGGGGCAGAGTCATC+TGG | 0.373119 | 3.4:-38520220 | None:intergenic |
| CTTGGTTCAATCTCAGCAAC+AGG | 0.374473 | 3.4:-38521824 | None:intergenic |
| CCCTGCACAGCTTATGGCCT+TGG | 0.376056 | 3.4:+38518542 | MS.gene22260:CDS |
| CCATGACTCTCAACCTCTTT+GGG | 0.381347 | 3.4:-38519058 | None:intergenic |
| CACTCAACCCATGGAGGAAC+TGG | 0.387048 | 3.4:-38522009 | None:intergenic |
| GAATTATGCATTGTATTTGA+AGG | 0.397343 | 3.4:-38521172 | None:intergenic |
| AGGACAGGATCCATATGATA+TGG | 0.397603 | 3.4:+38519213 | MS.gene22260:CDS |
| ATGCATTGTATTTGAAGGTT+CGG | 0.397770 | 3.4:-38521167 | None:intergenic |
| GATTTGGACGTAGACTCAAC+TGG | 0.408527 | 3.4:+38520941 | MS.gene22260:CDS |
| CTCGTGATAGCGATGATCAC+TGG | 0.417810 | 3.4:-38521053 | None:intergenic |
| GGGGAAGCACCTTCTTATAA+TGG | 0.419829 | 3.4:+38520962 | MS.gene22260:CDS |
| CTATAAGGCTCCATATCATA+TGG | 0.423768 | 3.4:-38519223 | None:intergenic |
| GCATGGTGAGTACAGGTGTT+TGG | 0.431803 | 3.4:+38519033 | MS.gene22260:CDS |
| TCCAAGGCCATAAGCTGTGC+AGG | 0.439233 | 3.4:-38518543 | None:intergenic |
| TTGTTCTTTGTTGAATAAGC+TGG | 0.441613 | 3.4:-38520862 | None:intergenic |
| TTGCAGGAAGAAAAGTTCAA+TGG | 0.441671 | 3.4:+38521347 | MS.gene22260:intron |
| TGCAGGAAGAAAAGTTCAAT+GGG | 0.443717 | 3.4:+38521348 | MS.gene22260:intron |
| AAAGGTGAAGTATGTGCTAA+TGG | 0.444429 | 3.4:+38518935 | MS.gene22260:CDS |
| CAGATGACTCTGCCCCAAAC+AGG | 0.449852 | 3.4:+38520221 | MS.gene22260:CDS |
| GTTCTTGCCAGGCAAATGAT+TGG | 0.454021 | 3.4:-38520909 | None:intergenic |
| TATCATATGGATCCTGTCCT+TGG | 0.459663 | 3.4:-38519210 | None:intergenic |
| TCAACTTTCATTTCCTCTGT+GGG | 0.466436 | 3.4:-38518830 | None:intergenic |
| AAAGAGAGGGGTTTGCATCA+TGG | 0.471242 | 3.4:-38520189 | None:intergenic |
| ACAAATGGAAGGTGGTGACT+TGG | 0.472755 | 3.4:+38520799 | MS.gene22260:CDS |
| TATAGACACGTAACACCAAA+TGG | 0.476346 | 3.4:+38519241 | MS.gene22260:CDS |
| TCAAAATCTACATTAAGTAG+TGG | 0.476441 | 3.4:-38519391 | None:intergenic |
| AAGCGTGGAAGAGCTCCATT+TGG | 0.483958 | 3.4:-38519256 | None:intergenic |
| ACTGCTGTTAAGAATCGGTT+AGG | 0.488521 | 3.4:+38519346 | MS.gene22260:CDS |
| CTACTACATGGCTACAATAA+CGG | 0.493623 | 3.4:+38521106 | MS.gene22260:CDS |
| GGCACTAGAAATCATAGAAT+AGG | 0.497964 | 3.4:+38520983 | MS.gene22260:CDS |
| CTATAACTGCTGTTAAGAAT+CGG | 0.502559 | 3.4:+38519341 | MS.gene22260:CDS |
| ATTCATACCAATCATTTGCC+TGG | 0.506282 | 3.4:+38520902 | MS.gene22260:CDS |
| GGATCTGACTTCATAATCGC+CGG | 0.509626 | 3.4:-38521082 | None:intergenic |
| TACAGAAAATGATAGTGAAA+CGG | 0.510234 | 3.4:+38519138 | MS.gene22260:CDS |
| CCTACGGGATATAAACCATC+AGG | 0.511765 | 3.4:+38519283 | MS.gene22260:CDS |
| TTTCTAGTGCCATTATAAGA+AGG | 0.512283 | 3.4:-38520971 | None:intergenic |
| CAAATGGAAGGTGGTGACTT+GGG | 0.512635 | 3.4:+38520800 | MS.gene22260:CDS |
| TCCACAGGAAAGTTCTTGCC+AGG | 0.512885 | 3.4:-38520920 | None:intergenic |
| TTCAACTTTCATTTCCTCTG+TGG | 0.515681 | 3.4:-38518831 | None:intergenic |
| CTATGGATTCTGAAGAAAGA+GGG | 0.519430 | 3.4:+38521203 | MS.gene22260:CDS |
| GCTGGCGGGATTTCTTATCC+TGG | 0.525159 | 3.4:-38520844 | None:intergenic |
| TGATGAAACCAGTTCCTCCA+TGG | 0.527407 | 3.4:+38522001 | MS.gene22260:CDS |
| GCACTAAGCATGGTGAGTAC+AGG | 0.530782 | 3.4:+38519026 | MS.gene22260:CDS |
| TGCAAAGATGAGCTACTCTC+AGG | 0.534507 | 3.4:-38519172 | None:intergenic |
| TTGACAGAAAAGCAAATCTC+GGG | 0.535331 | 3.4:+38518872 | MS.gene22260:CDS |
| GTTGACAGAAAAGCAAATCT+CGG | 0.536727 | 3.4:+38518871 | MS.gene22260:CDS |
| GTTTGAAATTCAAATGCCCC+TGG | 0.538643 | 3.4:-38519424 | None:intergenic |
| AAAGAATATCATGAGTCAGA+TGG | 0.539635 | 3.4:+38521386 | MS.gene22260:CDS |
| TCTTCTAATTGCAACTCCAT+CGG | 0.542711 | 3.4:-38518474 | None:intergenic |
| TCCCAAGATTTACAAATGGA+AGG | 0.543378 | 3.4:+38520788 | MS.gene22260:CDS |
| TCTTCCACGCTTAAATCCTA+CGG | 0.548387 | 3.4:+38519267 | MS.gene22260:CDS |
| TGTTAACACAATACCTTCCA+TGG | 0.550566 | 3.4:-38517295 | None:intergenic |
| CAAAATCTACATTAAGTAGT+GGG | 0.551836 | 3.4:-38519390 | None:intergenic |
| TCTGGAGAATTTGAAAGAGA+GGG | 0.555797 | 3.4:-38520202 | None:intergenic |
| AAGTTCCCAAGATTTACAAA+TGG | 0.561294 | 3.4:+38520784 | MS.gene22260:CDS |
| CCAAGGCCATAAGCTGTGCA+GGG | 0.562140 | 3.4:-38518542 | None:intergenic |
| GTAATGTGAAGAATGTACTA+AGG | 0.562204 | 3.4:+38521128 | MS.gene22260:CDS |
| CTTCCACGCTTAAATCCTAC+GGG | 0.562266 | 3.4:+38519268 | MS.gene22260:CDS |
| TCTATGGATTCTGAAGAAAG+AGG | 0.562753 | 3.4:+38521202 | MS.gene22260:CDS |
| ACGGTATTATCTCCAAGGAC+AGG | 0.562785 | 3.4:+38519198 | MS.gene22260:CDS |
| TTCTTTGTTGAATAAGCTGG+CGG | 0.564732 | 3.4:-38520859 | None:intergenic |
| AAGAAAGAGGGCTTTCTGAA+AGG | 0.565873 | 3.4:+38521215 | MS.gene22260:CDS |
| AAGAGGGCTTTCTGAAAGGA+TGG | 0.567622 | 3.4:+38521219 | MS.gene22260:CDS |
| CTGGAGAATTTGAAAGAGAG+GGG | 0.568291 | 3.4:-38520201 | None:intergenic |
| CAACTTTCATTTCCTCTGTG+GGG | 0.569792 | 3.4:-38518829 | None:intergenic |
| ATCTGGAGAATTTGAAAGAG+AGG | 0.570870 | 3.4:-38520203 | None:intergenic |
| CTCACCACAGTTTCTCTCAA+AGG | 0.571956 | 3.4:-38521419 | None:intergenic |
| GCACTAAGCATGGTGTTGAA+AGG | 0.573397 | 3.4:+38521005 | MS.gene22260:CDS |
| GCCTGGCAAGAACTTTCCTG+TGG | 0.575905 | 3.4:+38520919 | MS.gene22260:CDS |
| TCGTGATAGCGATGATCACT+GGG | 0.576108 | 3.4:-38521052 | None:intergenic |
| CCCAAAGAGGTTGAGAGTCA+TGG | 0.576918 | 3.4:+38519058 | MS.gene22260:CDS |
| AGTCATCAGCACTCAACCCA+TGG | 0.576920 | 3.4:-38522018 | None:intergenic |
| CAAGAACGGTATTATCTCCA+AGG | 0.580779 | 3.4:+38519193 | MS.gene22260:CDS |
| AGAAGACAATACAACCTCTA+CGG | 0.585953 | 3.4:+38518491 | MS.gene22260:CDS |
| CTGTTAAGAATCGGTTAGGA+AGG | 0.588262 | 3.4:+38519350 | MS.gene22260:CDS |
| GATGAAACCAGTTCCTCCAT+GGG | 0.588465 | 3.4:+38522002 | MS.gene22260:CDS |
| CAGGTGTTTGGATCCCAAAG+AGG | 0.589068 | 3.4:+38519045 | MS.gene22260:CDS |
| GTAGCTCATCTTTGCAAGAA+CGG | 0.592344 | 3.4:+38519179 | MS.gene22260:CDS |
| ATTTGGACGTAGACTCAACT+GGG | 0.595498 | 3.4:+38520942 | MS.gene22260:CDS |
| AAAGATAAGAGACTGATGAA+AGG | 0.596779 | 3.4:+38518917 | MS.gene22260:CDS |
| GAGTCTACGTCCAAATCCAC+AGG | 0.597808 | 3.4:-38520935 | None:intergenic |
| GTGAAGAATGTACTAAGGAG+TGG | 0.600013 | 3.4:+38521133 | MS.gene22260:CDS |
| TAGACACGATTGCCTGTTTG+GGG | 0.604461 | 3.4:-38520233 | None:intergenic |
| CATAGAATAGGCACTAAGCA+TGG | 0.605322 | 3.4:+38520995 | MS.gene22260:CDS |
| AAGTCAGATCCACTACTACA+TGG | 0.608206 | 3.4:+38521094 | MS.gene22260:CDS |
| GATCTGACTTCATAATCGCC+GGG | 0.612811 | 3.4:-38521081 | None:intergenic |
| CAGAAAAGCAAATCTCGGGA+TGG | 0.614233 | 3.4:+38518876 | MS.gene22260:CDS |
| CAAGATTTACAAATGGAAGG+TGG | 0.616333 | 3.4:+38520791 | MS.gene22260:CDS |
| TTATTGTAGCCATGTAGTAG+TGG | 0.623018 | 3.4:-38521103 | None:intergenic |
| GCTTTCTGAAAGGATGGCAA+AGG | 0.632256 | 3.4:+38521225 | MS.gene22260:CDS |
| TCATGTGGAAGCACTAAGCA+TGG | 0.632594 | 3.4:+38519016 | MS.gene22260:CDS |
| CAAGGCCATAAGCTGTGCAG+GGG | 0.634076 | 3.4:-38518541 | None:intergenic |
| GAAGAAAGAGATAGAGCATG+CGG | 0.640968 | 3.4:+38519318 | MS.gene22260:CDS |
| TCATCCTCACTAAAGCTAGA+CGG | 0.642459 | 3.4:-38521972 | None:intergenic |
| AAGACCGTGTCAGTGGACTA+GGG | 0.645299 | 3.4:+38518987 | MS.gene22260:CDS |
| GTTGTTCAAGACCGTGTCAG+TGG | 0.646069 | 3.4:+38518980 | MS.gene22260:CDS |
| TCTTTGTTGAATAAGCTGGC+GGG | 0.646615 | 3.4:-38520858 | None:intergenic |
| CCTGATGGTTTATATCCCGT+AGG | 0.652093 | 3.4:-38519283 | None:intergenic |
| GGACGACAAGATCGATCAAG+TGG | 0.652409 | 3.4:+38518956 | MS.gene22260:CDS |
| TGAAATTCAAATGCCCCTGG+AGG | 0.656858 | 3.4:-38519421 | None:intergenic |
| CTGGAAATCAGAATCATGCA+AGG | 0.657071 | 3.4:-38520825 | None:intergenic |
| CTTGCCCTAGTCCACTGACA+CGG | 0.661193 | 3.4:-38518991 | None:intergenic |
| GGACTAGGGCAAGATTCATG+TGG | 0.663027 | 3.4:+38519001 | MS.gene22260:CDS |
| TCGCTATCACGAGAATAACC+CGG | 0.675003 | 3.4:+38521063 | MS.gene22260:CDS |
| ATGATAATGTAGATCTGCTG+TGG | 0.688279 | 3.4:+38521944 | MS.gene22260:intron |
| CATCAGCACTCAACCCATGG+AGG | 0.702201 | 3.4:-38522015 | None:intergenic |
| ATTGCCTTTGAGAGAAACTG+TGG | 0.709138 | 3.4:+38521415 | MS.gene22260:CDS |
| GTTGCCGTCTAGCTTTAGTG+AGG | 0.710155 | 3.4:+38521968 | MS.gene22260:CDS |
| TTGAACCAAGGAAAACTCAG+AGG | 0.722923 | 3.4:+38521837 | MS.gene22260:CDS |
| CTGTTGCTGAGATTGAACCA+AGG | 0.733986 | 3.4:+38521825 | MS.gene22260:CDS |
| TATCCCGTAGGATTTAAGCG+TGG | 0.753375 | 3.4:-38519271 | None:intergenic |
| TTTGGACGTAGACTCAACTG+GGG | 0.792830 | 3.4:+38520943 | MS.gene22260:CDS |
| AGAGCACAAATACCCCACAG+AGG | 0.803915 | 3.4:+38518817 | MS.gene22260:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAACAATATTTCTTT+GGG | - | chr3.4:38519859-38519878 | None:intergenic | 15.0% |
| !! | AATAAGATGATGAAAAATAA+AGG | - | chr3.4:38520292-38520311 | None:intergenic | 15.0% |
| !! | AATTAACATTACCTAATAAA+AGG | - | chr3.4:38517597-38517616 | None:intergenic | 15.0% |
| !!! | ATTTATGTTTTGATTATTTG+AGG | + | chr3.4:38519626-38519645 | MS.gene22260:intron | 15.0% |
| !!! | TAACTTATGTAAAGTATTTT+TGG | + | chr3.4:38518022-38518041 | MS.gene22260:intron | 15.0% |
| !!! | TTGATAATTTGATTTTCTAT+CGG | + | chr3.4:38521476-38521495 | MS.gene22260:intron | 15.0% |
| !!! | TTTGAAATTTTCACTATTAA+TGG | + | chr3.4:38519682-38519701 | MS.gene22260:intron | 15.0% |
| !!! | TTTTATAGTATAGTAAAATG+CGG | + | chr3.4:38518634-38518653 | MS.gene22260:intron | 15.0% |
| !! | AACATGTTAAAAATTCATTC+AGG | - | chr3.4:38519653-38519672 | None:intergenic | 20.0% |
| !! | AATAGTGAAAATTTCAAACA+AGG | - | chr3.4:38519680-38519699 | None:intergenic | 20.0% |
| !! | AGAAAAAACAAGTTCAAATT+AGG | - | chr3.4:38517544-38517563 | None:intergenic | 20.0% |
| !! | ATAATCAAAACATAAATGCA+AGG | - | chr3.4:38519623-38519642 | None:intergenic | 20.0% |
| !! | ATGATACATTAATCATAAGT+AGG | + | chr3.4:38520321-38520340 | MS.gene22260:intron | 20.0% |
| !! | GAAAAAACAAGTTCAAATTA+GGG | - | chr3.4:38517543-38517562 | None:intergenic | 20.0% |
| !! | GAAACAAAACAATATTTCTT+TGG | - | chr3.4:38519860-38519879 | None:intergenic | 20.0% |
| !! | GTTAATGTTAAGAAAAGATA+AGG | - | chr3.4:38521744-38521763 | None:intergenic | 20.0% |
| !! | TCAACAACTTAAGATTATTA+GGG | + | chr3.4:38518211-38518230 | MS.gene22260:intron | 20.0% |
| !! | TTCTCAAAACAAATGAATTA+TGG | + | chr3.4:38519889-38519908 | MS.gene22260:intron | 20.0% |
| !!! | ATGGGTTTTTTTTTTTTTGA+AGG | + | chr3.4:38519828-38519847 | MS.gene22260:intron | 20.0% |
| !!! | CATACACATTTTTTCTTTTT+TGG | - | chr3.4:38517999-38518018 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTTCTTTTGTTAT+TGG | + | chr3.4:38517552-38517571 | MS.gene22260:intron | 20.0% |
| !!! | GTTAATTTTGAGCTTTTTTT+TGG | + | chr3.4:38517610-38517629 | MS.gene22260:intron | 20.0% |
| !!! | TTTTCTTAACATTAACACTT+AGG | + | chr3.4:38521748-38521767 | MS.gene22260:intron | 20.0% |
| ! | AAAAGAATTTCATTCTTAGC+TGG | - | chr3.4:38518156-38518175 | None:intergenic | 25.0% |
| ! | AATTGAAATTCATGCTGTTA+AGG | - | chr3.4:38521924-38521943 | None:intergenic | 25.0% |
| ! | ATGTATATGAGATAAATCCA+AGG | + | chr3.4:38517717-38517736 | MS.gene22260:intron | 25.0% |
| ! | ATTCGAATCAGTTTAATGTT+GGG | - | chr3.4:38518379-38518398 | None:intergenic | 25.0% |
| ! | CAAAATCTACATTAAGTAGT+GGG | - | chr3.4:38519393-38519412 | None:intergenic | 25.0% |
| ! | CAACAACTTAAGATTATTAG+GGG | + | chr3.4:38518212-38518231 | MS.gene22260:intron | 25.0% |
| ! | CTCAACAACTTAAGATTATT+AGG | + | chr3.4:38518210-38518229 | MS.gene22260:intron | 25.0% |
| ! | GAATTATGCATTGTATTTGA+AGG | - | chr3.4:38521175-38521194 | None:intergenic | 25.0% |
| ! | TAAAATTACATATGTTCGAG+AGG | + | chr3.4:38519709-38519728 | MS.gene22260:intron | 25.0% |
| ! | TCAAAATCTACATTAAGTAG+TGG | - | chr3.4:38519394-38519413 | None:intergenic | 25.0% |
| ! | TGTATATGAGATAAATCCAA+GGG | + | chr3.4:38517718-38517737 | MS.gene22260:intron | 25.0% |
| ! | TTGACAATAATTCTACCAAT+TGG | + | chr3.4:38521572-38521591 | MS.gene22260:intron | 25.0% |
| !! | ACCGTTATAAAAATTTTCCA+AGG | - | chr3.4:38518562-38518581 | None:intergenic | 25.0% |
| !! | ATTTTGTCATAACTTATGTG+AGG | + | chr3.4:38520037-38520056 | MS.gene22260:intron | 25.0% |
| !! | GCCTTGGAAAATTTTTATAA+CGG | + | chr3.4:38518558-38518577 | MS.gene22260:CDS | 25.0% |
| !! | TACAGAAAATGATAGTGAAA+CGG | + | chr3.4:38519138-38519157 | MS.gene22260:CDS | 25.0% |
| !! | TCAACAAAGAACAAATTTTC+AGG | + | chr3.4:38520871-38520890 | MS.gene22260:CDS | 25.0% |
| !! | TTCTTTCAAATCACATGTTT+TGG | + | chr3.4:38517661-38517680 | MS.gene22260:intron | 25.0% |
| !! | TTTTGTCATAACTTATGTGA+GGG | + | chr3.4:38520038-38520057 | MS.gene22260:intron | 25.0% |
| !!! | AATCACATGTTTTGGTTTTA+TGG | + | chr3.4:38517669-38517688 | MS.gene22260:intron | 25.0% |
| !!! | AATCACTTTTGAATCCAAAT+TGG | + | chr3.4:38520569-38520588 | MS.gene22260:intron | 25.0% |
| !!! | ATCACTTTTGAATCCAAATT+GGG | + | chr3.4:38520570-38520589 | MS.gene22260:intron | 25.0% |
| !!! | CTTTTCATGGTTTTAAATAG+TGG | + | chr3.4:38518592-38518611 | MS.gene22260:intron | 25.0% |
| !!! | TAATGGTGGATTATTTTTCA+GGG | + | chr3.4:38517403-38517422 | MS.gene22260:intron | 25.0% |
| !!! | TGTAAAGTATTTTTGGTGAA+TGG | + | chr3.4:38518029-38518048 | MS.gene22260:intron | 25.0% |
| !!! | TTCACTTTTAAATATCCTGA+TGG | - | chr3.4:38519301-38519320 | None:intergenic | 25.0% |
| AAAGAATATCATGAGTCAGA+TGG | + | chr3.4:38521386-38521405 | MS.gene22260:CDS | 30.0% | |
| AAAGATAAGAGACTGATGAA+AGG | + | chr3.4:38518917-38518936 | MS.gene22260:CDS | 30.0% | |
| AAGACACATTGTCAAAAAGA+TGG | - | chr3.4:38519964-38519983 | None:intergenic | 30.0% | |
| AAGTTCCCAAGATTTACAAA+TGG | + | chr3.4:38520784-38520803 | MS.gene22260:CDS | 30.0% | |
| AATCAAGATATACACAAGCA+TGG | - | chr3.4:38521714-38521733 | None:intergenic | 30.0% | |
| ACCTAAAAACCGTTATATTG+CGG | + | chr3.4:38518688-38518707 | MS.gene22260:intron | 30.0% | |
| ACCTTCCATTTGTAAATCTT+GGG | - | chr3.4:38520792-38520811 | None:intergenic | 30.0% | |
| ACGTTTATAAGTTCAGAACT+TGG | - | chr3.4:38519763-38519782 | None:intergenic | 30.0% | |
| ACTACCAAAAAACAATCCTA+GGG | + | chr3.4:38517793-38517812 | MS.gene22260:intron | 30.0% | |
| AGACACATTGTCAAAAAGAT+GGG | - | chr3.4:38519963-38519982 | None:intergenic | 30.0% | |
| ATAGTAAACCTACCATTAAC+TGG | - | chr3.4:38519457-38519476 | None:intergenic | 30.0% | |
| ATATACACAAGCATGGAATA+TGG | - | chr3.4:38521707-38521726 | None:intergenic | 30.0% | |
| ATGAATTATGGCTGTGAAAA+TGG | + | chr3.4:38519901-38519920 | MS.gene22260:intron | 30.0% | |
| ATGCATTGTATTTGAAGGTT+CGG | - | chr3.4:38521170-38521189 | None:intergenic | 30.0% | |
| CAATGGTAACATTAAAGATC+AGG | - | chr3.4:38520354-38520373 | None:intergenic | 30.0% | |
| CAGAGACAATGCATAATATA+TGG | + | chr3.4:38517745-38517764 | MS.gene22260:intron | 30.0% | |
| CTATAACTGCTGTTAAGAAT+CGG | + | chr3.4:38519341-38519360 | MS.gene22260:CDS | 30.0% | |
| CTGATCTTATGAATATGCTT+TGG | + | chr3.4:38520156-38520175 | MS.gene22260:intron | 30.0% | |
| GACAATGCATAATATATGGA+AGG | + | chr3.4:38517749-38517768 | MS.gene22260:intron | 30.0% | |
| GATTCGAATCAGTTTAATGT+TGG | - | chr3.4:38518380-38518399 | None:intergenic | 30.0% | |
| GCATAATTCTCGAATTTCTA+TGG | + | chr3.4:38521186-38521205 | MS.gene22260:CDS | 30.0% | |
| GTAATGTGAAGAATGTACTA+AGG | + | chr3.4:38521128-38521147 | MS.gene22260:CDS | 30.0% | |
| GTATATGAGATAAATCCAAG+GGG | + | chr3.4:38517719-38517738 | MS.gene22260:intron | 30.0% | |
| TACTGAAAAGAAATTGTGCA+AGG | - | chr3.4:38518279-38518298 | None:intergenic | 30.0% | |
| TATACACAAGCATGGAATAT+GGG | - | chr3.4:38521706-38521725 | None:intergenic | 30.0% | |
| TCTTTATCAGATGATGCTAT+GGG | + | chr3.4:38519810-38519829 | MS.gene22260:intron | 30.0% | |
| TGCAATCAGATAATAGATCA+AGG | - | chr3.4:38520100-38520119 | None:intergenic | 30.0% | |
| TGCATAATATATGGAAGGTT+CGG | + | chr3.4:38517754-38517773 | MS.gene22260:intron | 30.0% | |
| TTGAACGGGACTTAAAAAAT+TGG | - | chr3.4:38519495-38519514 | None:intergenic | 30.0% | |
| TTGTTCTTTGTTGAATAAGC+TGG | - | chr3.4:38520865-38520884 | None:intergenic | 30.0% | |
| TTTGCTACCTTATAGTCATA+TGG | + | chr3.4:38521627-38521646 | MS.gene22260:intron | 30.0% | |
| TTTGTGAAGAATGATTGTGA+GGG | + | chr3.4:38518054-38518073 | MS.gene22260:intron | 30.0% | |
| ! | AATCTTAAGTTGTTGAGAAG+TGG | - | chr3.4:38518207-38518226 | None:intergenic | 30.0% |
| ! | AGAAAGCACAAGTATATTTG+TGG | - | chr3.4:38521252-38521271 | None:intergenic | 30.0% |
| ! | AGTATGCTTCTTTTGTCATA+TGG | + | chr3.4:38518730-38518749 | MS.gene22260:intron | 30.0% |
| ! | CACTATCATTTTCTGTACAA+TGG | - | chr3.4:38519135-38519154 | None:intergenic | 30.0% |
| ! | TCATGCATTGTTTGCATTTT+GGG | + | chr3.4:38517368-38517387 | MS.gene22260:intron | 30.0% |
| ! | TCTGTATGTTGCCTTTTATT+AGG | + | chr3.4:38517583-38517602 | MS.gene22260:intron | 30.0% |
| ! | TTCATGCATTGTTTGCATTT+TGG | + | chr3.4:38517367-38517386 | MS.gene22260:intron | 30.0% |
| ! | TTTCTAGTGCCATTATAAGA+AGG | - | chr3.4:38520974-38520993 | None:intergenic | 30.0% |
| ! | TTTTGTGAAGAATGATTGTG+AGG | + | chr3.4:38518053-38518072 | MS.gene22260:intron | 30.0% |
| !! | AGAAGCATACTTTTAAACTG+CGG | - | chr3.4:38518721-38518740 | None:intergenic | 30.0% |
| !! | ATTTTGATACAATTCCTCCA+GGG | + | chr3.4:38519407-38519426 | MS.gene22260:CDS | 30.0% |
| !! | TTTACTATTTTTCTCCGTAG+AGG | - | chr3.4:38518508-38518527 | None:intergenic | 30.0% |
| !!! | ATGGTTTTAAATAGTGGTTG+CGG | + | chr3.4:38518598-38518617 | MS.gene22260:intron | 30.0% |
| !!! | CTTAACTTGTGCTTTTCTTT+TGG | + | chr3.4:38518442-38518461 | MS.gene22260:intron | 30.0% |
| !!! | CTTTTTTGGAAACTCATATC+CGG | - | chr3.4:38517985-38518004 | None:intergenic | 30.0% |
| !!! | GTAATGGTGGATTATTTTTC+AGG | + | chr3.4:38517402-38517421 | MS.gene22260:intron | 30.0% |
| AAAGGTGAAGTATGTGCTAA+TGG | + | chr3.4:38518935-38518954 | MS.gene22260:CDS | 35.0% | |
| ACTTTGCTCTGACTTCAATT+GGG | + | chr3.4:38517907-38517926 | MS.gene22260:intron | 35.0% | |
| AGAAGACAATACAACCTCTA+CGG | + | chr3.4:38518491-38518510 | MS.gene22260:CDS | 35.0% | |
| AGTCTACATAGACTCATGAA+AGG | - | chr3.4:38519586-38519605 | None:intergenic | 35.0% | |
| ATAAACGTTGTAGCTTGACT+TGG | + | chr3.4:38519775-38519794 | MS.gene22260:intron | 35.0% | |
| ATACACAAGCATGGAATATG+GGG | - | chr3.4:38521705-38521724 | None:intergenic | 35.0% | |
| ATCTGGAGAATTTGAAAGAG+AGG | - | chr3.4:38520206-38520225 | None:intergenic | 35.0% | |
| ATTCATACCAATCATTTGCC+TGG | + | chr3.4:38520902-38520921 | MS.gene22260:CDS | 35.0% | |
| ATTGTGAGGGTAGAAAGAAA+TGG | + | chr3.4:38518067-38518086 | MS.gene22260:intron | 35.0% | |
| CAAACTGCAAATCCAGTTAA+TGG | + | chr3.4:38519442-38519461 | MS.gene22260:CDS | 35.0% | |
| CAACTTAAGATTATTAGGGG+AGG | + | chr3.4:38518215-38518234 | MS.gene22260:intron | 35.0% | |
| CAAGATTTACAAATGGAAGG+TGG | + | chr3.4:38520791-38520810 | MS.gene22260:CDS | 35.0% | |
| CACCTTCCATTTGTAAATCT+TGG | - | chr3.4:38520793-38520812 | None:intergenic | 35.0% | |
| CACTACCAAAAAACAATCCT+AGG | + | chr3.4:38517792-38517811 | MS.gene22260:intron | 35.0% | |
| CACTGCTAAATAATAGATCG+CGG | + | chr3.4:38520433-38520452 | MS.gene22260:intron | 35.0% | |
| CATAATATATGGAAGGTTCG+GGG | + | chr3.4:38517756-38517775 | MS.gene22260:intron | 35.0% | |
| CATATCTCTGCAAATACGTA+TGG | - | chr3.4:38520745-38520764 | None:intergenic | 35.0% | |
| CTACCAAAAAACAATCCTAG+GGG | + | chr3.4:38517794-38517813 | MS.gene22260:intron | 35.0% | |
| CTACTACATGGCTACAATAA+CGG | + | chr3.4:38521106-38521125 | MS.gene22260:CDS | 35.0% | |
| CTATAAGGCTCCATATCATA+TGG | - | chr3.4:38519226-38519245 | None:intergenic | 35.0% | |
| CTCTTTATCAGATGATGCTA+TGG | + | chr3.4:38519809-38519828 | MS.gene22260:intron | 35.0% | |
| GATGACTTAACATGTATGCT+TGG | + | chr3.4:38521315-38521334 | MS.gene22260:intron | 35.0% | |
| GCATAACTTACTTTCATCTG+TGG | + | chr3.4:38521450-38521469 | MS.gene22260:intron | 35.0% | |
| GCATAATATATGGAAGGTTC+GGG | + | chr3.4:38517755-38517774 | MS.gene22260:intron | 35.0% | |
| GCATATTCATAAGATCAGAG+AGG | - | chr3.4:38520154-38520173 | None:intergenic | 35.0% | |
| GGCAAATGATTGGTATGAAT+TGG | - | chr3.4:38520902-38520921 | None:intergenic | 35.0% | |
| GGCACTAGAAATCATAGAAT+AGG | + | chr3.4:38520983-38521002 | MS.gene22260:CDS | 35.0% | |
| GTCTTGCAAAGCTAATTGAA+CGG | - | chr3.4:38519510-38519529 | None:intergenic | 35.0% | |
| GTTAAGTACGCATGTTAGAA+TGG | - | chr3.4:38518428-38518447 | None:intergenic | 35.0% | |
| GTTGACAGAAAAGCAAATCT+CGG | + | chr3.4:38518871-38518890 | MS.gene22260:CDS | 35.0% | |
| TACCAAAAAACAATCCTAGG+GGG | + | chr3.4:38517795-38517814 | MS.gene22260:intron | 35.0% | |
| TATAGACACGTAACACCAAA+TGG | + | chr3.4:38519241-38519260 | MS.gene22260:CDS | 35.0% | |
| TCAACTTTCATTTCCTCTGT+GGG | - | chr3.4:38518833-38518852 | None:intergenic | 35.0% | |
| TCAAGAACTAAAGCTTAGCA+AGG | - | chr3.4:38518771-38518790 | None:intergenic | 35.0% | |
| TCCCAAGATTTACAAATGGA+AGG | + | chr3.4:38520788-38520807 | MS.gene22260:CDS | 35.0% | |
| TCTGGAGAATTTGAAAGAGA+GGG | - | chr3.4:38520205-38520224 | None:intergenic | 35.0% | |
| TCTTCTAATTGCAACTCCAT+CGG | - | chr3.4:38518477-38518496 | None:intergenic | 35.0% | |
| TCTTGCAAAGCTAATTGAAC+GGG | - | chr3.4:38519509-38519528 | None:intergenic | 35.0% | |
| TGATTCGTGATTGACAACAA+TGG | - | chr3.4:38520371-38520390 | None:intergenic | 35.0% | |
| TGCAGGAAGAAAAGTTCAAT+GGG | + | chr3.4:38521348-38521367 | MS.gene22260:intron | 35.0% | |
| TGTAGCACCATATGACTATA+AGG | - | chr3.4:38521637-38521656 | None:intergenic | 35.0% | |
| TGTTGTAGCACTGTTTATAG+TGG | - | chr3.4:38521545-38521564 | None:intergenic | 35.0% | |
| TTATTGTAGCCATGTAGTAG+TGG | - | chr3.4:38521106-38521125 | None:intergenic | 35.0% | |
| TTCAACTTTCATTTCCTCTG+TGG | - | chr3.4:38518834-38518853 | None:intergenic | 35.0% | |
| TTCTACCAATTGGCATATCA+CGG | + | chr3.4:38521582-38521601 | MS.gene22260:intron | 35.0% | |
| TTCTGCTTCTAGATCAGAAA+AGG | + | chr3.4:38518319-38518338 | MS.gene22260:intron | 35.0% | |
| TTCTTTGTTGAATAAGCTGG+CGG | - | chr3.4:38520862-38520881 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAATCTC+GGG | + | chr3.4:38518872-38518891 | MS.gene22260:CDS | 35.0% | |
| TTGCAGGAAGAAAAGTTCAA+TGG | + | chr3.4:38521347-38521366 | MS.gene22260:intron | 35.0% | |
| ! | AGACTAGTTATATCTTCTGC+AGG | + | chr3.4:38519526-38519545 | MS.gene22260:intron | 35.0% |
| ! | ATGATAATGTAGATCTGCTG+TGG | + | chr3.4:38521944-38521963 | MS.gene22260:intron | 35.0% |
| ! | ATGCATTGTTTGCATTTTGG+GGG | + | chr3.4:38517370-38517389 | MS.gene22260:intron | 35.0% |
| ! | CATGCATTGTTTGCATTTTG+GGG | + | chr3.4:38517369-38517388 | MS.gene22260:intron | 35.0% |
| ! | CTATGGATTCTGAAGAAAGA+GGG | + | chr3.4:38521203-38521222 | MS.gene22260:CDS | 35.0% |
| ! | CTTTTGAATCCAAATTGGGT+TGG | + | chr3.4:38520574-38520593 | MS.gene22260:intron | 35.0% |
| ! | GCTTCTTTTGTCATATGGAT+AGG | + | chr3.4:38518735-38518754 | MS.gene22260:intron | 35.0% |
| ! | TCTATGGATTCTGAAGAAAG+AGG | + | chr3.4:38521202-38521221 | MS.gene22260:CDS | 35.0% |
| ! | TGGACTAACACAAGTATTGT+TGG | - | chr3.4:38517876-38517895 | None:intergenic | 35.0% |
| ! | TTGGGGGAAGATTTTTGTAA+TGG | + | chr3.4:38517386-38517405 | MS.gene22260:intron | 35.0% |
| ! | TTTTGATACAATTCCTCCAG+GGG | + | chr3.4:38519408-38519427 | MS.gene22260:CDS | 35.0% |
| !! | GATTTTGATACAATTCCTCC+AGG | + | chr3.4:38519406-38519425 | MS.gene22260:CDS | 35.0% |
| !! | TTGCTAAGCTTTAGTTCTTG+AGG | + | chr3.4:38518770-38518789 | MS.gene22260:intron | 35.0% |
| !! | TTTGGTGTTACGTGTCTATA+AGG | - | chr3.4:38519241-38519260 | None:intergenic | 35.0% |
| !!! | CTAGGATTGTTTTTTGGTAG+TGG | - | chr3.4:38517794-38517813 | None:intergenic | 35.0% |
| !!! | GGTAAGAGTACTTCTTTTCA+TGG | + | chr3.4:38518579-38518598 | MS.gene22260:intron | 35.0% |
| AAAAAACAATCCTAGGGGGT+TGG | + | chr3.4:38517799-38517818 | MS.gene22260:intron | 40.0% | |
| AAGAAAGAGGGCTTTCTGAA+AGG | + | chr3.4:38521215-38521234 | MS.gene22260:CDS | 40.0% | |
| AAGTCAGATCCACTACTACA+TGG | + | chr3.4:38521094-38521113 | MS.gene22260:CDS | 40.0% | |
| ACTGCTGTTAAGAATCGGTT+AGG | + | chr3.4:38519346-38519365 | MS.gene22260:CDS | 40.0% | |
| AGGACAGGATCCATATGATA+TGG | + | chr3.4:38519213-38519232 | MS.gene22260:CDS | 40.0% | |
| AGGATCTATCTCATTGAAGC+AGG | + | chr3.4:38518235-38518254 | MS.gene22260:intron | 40.0% | |
| ATAAGAAGCGACTAATCCGA+GGG | - | chr3.4:38517961-38517980 | None:intergenic | 40.0% | |
| ATTGTGGTCGCAGAAAATAG+CGG | + | chr3.4:38521507-38521526 | MS.gene22260:intron | 40.0% | |
| ATTTGGACGTAGACTCAACT+GGG | + | chr3.4:38520942-38520961 | MS.gene22260:CDS | 40.0% | |
| CAAAACTAGCTCACCGAAAT+CGG | - | chr3.4:38520669-38520688 | None:intergenic | 40.0% | |
| CAACTTTCATTTCCTCTGTG+GGG | - | chr3.4:38518832-38518851 | None:intergenic | 40.0% | |
| CAAGAACGGTATTATCTCCA+AGG | + | chr3.4:38519193-38519212 | MS.gene22260:CDS | 40.0% | |
| CAAGAACTTTCCTGTGGATT+TGG | + | chr3.4:38520925-38520944 | MS.gene22260:CDS | 40.0% | |
| CATAGAATAGGCACTAAGCA+TGG | + | chr3.4:38520995-38521014 | MS.gene22260:CDS | 40.0% | |
| CTGCAAATCCAGTTAATGGT+AGG | + | chr3.4:38519446-38519465 | MS.gene22260:intron | 40.0% | |
| CTGGAAATCAGAATCATGCA+AGG | - | chr3.4:38520828-38520847 | None:intergenic | 40.0% | |
| CTGGAGAATTTGAAAGAGAG+GGG | - | chr3.4:38520204-38520223 | None:intergenic | 40.0% | |
| CTGTTAAGAATCGGTTAGGA+AGG | + | chr3.4:38519350-38519369 | MS.gene22260:CDS | 40.0% | |
| CTTGCATGATTCTGATTTCC+AGG | + | chr3.4:38520826-38520845 | MS.gene22260:CDS | 40.0% | |
| GAAGAAAGAGATAGAGCATG+CGG | + | chr3.4:38519318-38519337 | MS.gene22260:CDS | 40.0% | |
| GACTTTGCTCTGACTTCAAT+TGG | + | chr3.4:38517906-38517925 | MS.gene22260:intron | 40.0% | |
| GAGCAAAGTCATGTATGAAC+TGG | - | chr3.4:38517896-38517915 | None:intergenic | 40.0% | |
| GATCAGAAAAGGCAGATTTC+TGG | + | chr3.4:38518330-38518349 | MS.gene22260:intron | 40.0% | |
| GTAGCTCATCTTTGCAAGAA+CGG | + | chr3.4:38519179-38519198 | MS.gene22260:CDS | 40.0% | |
| GTGAAGAATGTACTAAGGAG+TGG | + | chr3.4:38521133-38521152 | MS.gene22260:CDS | 40.0% | |
| TATCATATGGATCCTGTCCT+TGG | - | chr3.4:38519213-38519232 | None:intergenic | 40.0% | |
| TCAAAAAGATGGGCATGTGA+TGG | - | chr3.4:38519953-38519972 | None:intergenic | 40.0% | |
| TCATCCTCACTAAAGCTAGA+CGG | - | chr3.4:38521975-38521994 | None:intergenic | 40.0% | |
| TCTTCCACGCTTAAATCCTA+CGG | + | chr3.4:38519267-38519286 | MS.gene22260:CDS | 40.0% | |
| TCTTTGTTGAATAAGCTGGC+GGG | - | chr3.4:38520861-38520880 | None:intergenic | 40.0% | |
| TTAGACACGATTGCCTGTTT+GGG | - | chr3.4:38520237-38520256 | None:intergenic | 40.0% | |
| TTGAACCAAGGAAAACTCAG+AGG | + | chr3.4:38521837-38521856 | MS.gene22260:CDS | 40.0% | |
| TTGTTCCGTGATATGCCAAT+TGG | - | chr3.4:38521590-38521609 | None:intergenic | 40.0% | |
| TTTAGACACGATTGCCTGTT+TGG | - | chr3.4:38520238-38520257 | None:intergenic | 40.0% | |
| TTTGAACCTCAGACCTATAG+AGG | - | chr3.4:38517842-38517861 | None:intergenic | 40.0% | |
| ! | AATCTCATTGTGGACTAACG+GGG | - | chr3.4:38517935-38517954 | None:intergenic | 40.0% |
| ! | ATTGCCTTTGAGAGAAACTG+TGG | + | chr3.4:38521415-38521434 | MS.gene22260:CDS | 40.0% |
| ! | CAATCTCATTGTGGACTAAC+GGG | - | chr3.4:38517936-38517955 | None:intergenic | 40.0% |
| ! | CAATGTGTCTTCGCTTGTTT+TGG | + | chr3.4:38519973-38519992 | MS.gene22260:intron | 40.0% |
| ! | CCAATCTCATTGTGGACTAA+CGG | - | chr3.4:38517937-38517956 | None:intergenic | 40.0% |
| ! | GCCGCAATATAACGGTTTTT+AGG | - | chr3.4:38518692-38518711 | None:intergenic | 40.0% |
| ! | GGGGAAGATTTTTGTAATGG+TGG | + | chr3.4:38517389-38517408 | MS.gene22260:intron | 40.0% |
| ! | GTTTGAAATTCAAATGCCCC+TGG | - | chr3.4:38519427-38519446 | None:intergenic | 40.0% |
| !! | TCTATCGGTGTTGTCAATTG+TGG | + | chr3.4:38521491-38521510 | MS.gene22260:intron | 40.0% |
| !!! | AACCCCCTAGGATTGTTTTT+TGG | - | chr3.4:38517800-38517819 | None:intergenic | 40.0% |
| !!! | CGGTTTTTAGGTATTCGCAA+TGG | - | chr3.4:38518680-38518699 | None:intergenic | 40.0% |
| !!! | CTTTTGGTTTTCAGAACCGA+TGG | + | chr3.4:38518458-38518477 | MS.gene22260:intron | 40.0% |
| !!! | GGAAGGTATTTTCTGGAAGA+TGG | + | chr3.4:38519367-38519386 | MS.gene22260:CDS | 40.0% |
| !!! | TCGGTTAGGAAGGTATTTTC+TGG | + | chr3.4:38519360-38519379 | MS.gene22260:CDS | 40.0% |
| !!! | TGCTTGGTTGCATTTTTTGC+AGG | + | chr3.4:38521331-38521350 | MS.gene22260:intron | 40.0% |
| !!! | TTGTTTTTTGGTAGTGGTCG+AGG | - | chr3.4:38517788-38517807 | None:intergenic | 40.0% |
| AAAGAGAGGGGTTTGCATCA+TGG | - | chr3.4:38520192-38520211 | None:intergenic | 45.0% | |
| AAGCATGGAATATGGGGAAC+GGG | - | chr3.4:38521699-38521718 | None:intergenic | 45.0% | |
| AATAGATCGCGGAACAAGAG+TGG | + | chr3.4:38520444-38520463 | MS.gene22260:intron | 45.0% | |
| ACAAATGGAAGGTGGTGACT+TGG | + | chr3.4:38520799-38520818 | MS.gene22260:CDS | 45.0% | |
| ACCATGACTCTCAACCTCTT+TGG | - | chr3.4:38519062-38519081 | None:intergenic | 45.0% | |
| ACGGTATTATCTCCAAGGAC+AGG | + | chr3.4:38519198-38519217 | MS.gene22260:CDS | 45.0% | |
| AGAGAAACTGTGGTGAGTCT+TGG | + | chr3.4:38521425-38521444 | MS.gene22260:intron | 45.0% | |
| ATTGAACCTGAGACCTTGAG+AGG | - | chr3.4:38520635-38520654 | None:intergenic | 45.0% | |
| CAAATGGAAGGTGGTGACTT+GGG | + | chr3.4:38520800-38520819 | MS.gene22260:CDS | 45.0% | |
| CAAGCATGGAATATGGGGAA+CGG | - | chr3.4:38521700-38521719 | None:intergenic | 45.0% | |
| CAGAAAAGCAAATCTCGGGA+TGG | + | chr3.4:38518876-38518895 | MS.gene22260:CDS | 45.0% | |
| CATAAGAAGCGACTAATCCG+AGG | - | chr3.4:38517962-38517981 | None:intergenic | 45.0% | |
| CCATGACTCTCAACCTCTTT+GGG | - | chr3.4:38519061-38519080 | None:intergenic | 45.0% | |
| CCGTTAGTCCACAATGAGAT+TGG | + | chr3.4:38517934-38517953 | MS.gene22260:intron | 45.0% | |
| CCTACGGGATATAAACCATC+AGG | + | chr3.4:38519283-38519302 | MS.gene22260:CDS | 45.0% | |
| CCTGATGGTTTATATCCCGT+AGG | - | chr3.4:38519286-38519305 | None:intergenic | 45.0% | |
| CTCACCACAGTTTCTCTCAA+AGG | - | chr3.4:38521422-38521441 | None:intergenic | 45.0% | |
| CTGTTGCTGAGATTGAACCA+AGG | + | chr3.4:38521825-38521844 | MS.gene22260:CDS | 45.0% | |
| CTTCCACGCTTAAATCCTAC+GGG | + | chr3.4:38519268-38519287 | MS.gene22260:CDS | 45.0% | |
| CTTGAGAGGATTACACTCCA+AGG | - | chr3.4:38520621-38520640 | None:intergenic | 45.0% | |
| CTTGGAGTGTAATCCTCTCA+AGG | + | chr3.4:38520619-38520638 | MS.gene22260:intron | 45.0% | |
| CTTGGTTCAATCTCAGCAAC+AGG | - | chr3.4:38521827-38521846 | None:intergenic | 45.0% | |
| GATCTGACTTCATAATCGCC+GGG | - | chr3.4:38521084-38521103 | None:intergenic | 45.0% | |
| GATGAAACCAGTTCCTCCAT+GGG | + | chr3.4:38522002-38522021 | MS.gene22260:CDS | 45.0% | |
| GATTTGGACGTAGACTCAAC+TGG | + | chr3.4:38520941-38520960 | MS.gene22260:CDS | 45.0% | |
| GGATCTGACTTCATAATCGC+CGG | - | chr3.4:38521085-38521104 | None:intergenic | 45.0% | |
| GTAGAAAGAAATGGCTGGCA+TGG | + | chr3.4:38518076-38518095 | MS.gene22260:intron | 45.0% | |
| GTTCTTGCCAGGCAAATGAT+TGG | - | chr3.4:38520912-38520931 | None:intergenic | 45.0% | |
| TAAAACCCCTGCACAGCTTA+TGG | + | chr3.4:38518536-38518555 | MS.gene22260:CDS | 45.0% | |
| TAGACACGATTGCCTGTTTG+GGG | - | chr3.4:38520236-38520255 | None:intergenic | 45.0% | |
| TAGACTCATGAAAGGTCCGT+TGG | - | chr3.4:38519578-38519597 | None:intergenic | 45.0% | |
| TATCCCGTAGGATTTAAGCG+TGG | - | chr3.4:38519274-38519293 | None:intergenic | 45.0% | |
| TCGCTATCACGAGAATAACC+CGG | + | chr3.4:38521063-38521082 | MS.gene22260:CDS | 45.0% | |
| TGAAATTCAAATGCCCCTGG+AGG | - | chr3.4:38519424-38519443 | None:intergenic | 45.0% | |
| TGAGGGTAGAAAGAAATGGC+TGG | + | chr3.4:38518071-38518090 | MS.gene22260:intron | 45.0% | |
| TGATGAAACCAGTTCCTCCA+TGG | + | chr3.4:38522001-38522020 | MS.gene22260:CDS | 45.0% | |
| TGCAAAGATGAGCTACTCTC+AGG | - | chr3.4:38519175-38519194 | None:intergenic | 45.0% | |
| TGGCATCACAACAGCAATAG+CGG | - | chr3.4:38518660-38518679 | None:intergenic | 45.0% | |
| TGTAATCCTCTCAAGGTCTC+AGG | + | chr3.4:38520626-38520645 | MS.gene22260:intron | 45.0% | |
| TTTGGACGTAGACTCAACTG+GGG | + | chr3.4:38520943-38520962 | MS.gene22260:CDS | 45.0% | |
| ! | AAGAGGGCTTTCTGAAAGGA+TGG | + | chr3.4:38521219-38521238 | MS.gene22260:CDS | 45.0% |
| ! | ACAAGTATTGTTGGCACCTG+GGG | - | chr3.4:38517867-38517886 | None:intergenic | 45.0% |
| ! | ACACAAGTATTGTTGGCACC+TGG | - | chr3.4:38517869-38517888 | None:intergenic | 45.0% |
| ! | CACAAGTATTGTTGGCACCT+GGG | - | chr3.4:38517868-38517887 | None:intergenic | 45.0% |
| ! | GCACTAAGCATGGTGTTGAA+AGG | + | chr3.4:38521005-38521024 | MS.gene22260:CDS | 45.0% |
| ! | GCTTTCTGAAAGGATGGCAA+AGG | + | chr3.4:38521225-38521244 | MS.gene22260:CDS | 45.0% |
| ! | TCGTGATAGCGATGATCACT+GGG | - | chr3.4:38521055-38521074 | None:intergenic | 45.0% |
| ! | TGCAAGGAGCATGCATAACT+AGG | - | chr3.4:38518263-38518282 | None:intergenic | 45.0% |
| ! | TGTCACCTCTGAGTTTTCCT+TGG | - | chr3.4:38521845-38521864 | None:intergenic | 45.0% |
| !! | GGATTAGTCGCTTCTTATGC+CGG | + | chr3.4:38517963-38517982 | MS.gene22260:intron | 45.0% |
| !! | GGGGAAGCACCTTCTTATAA+TGG | + | chr3.4:38520962-38520981 | MS.gene22260:CDS | 45.0% |
| !! | TCATGTGGAAGCACTAAGCA+TGG | + | chr3.4:38519016-38519035 | MS.gene22260:CDS | 45.0% |
| !!! | CGGGATGGTTTTGTCATAGA+AGG | + | chr3.4:38518891-38518910 | MS.gene22260:CDS | 45.0% |
| !!! | CTAAATATTTATTTTATATT+TGG | - | chr3.4:38517498-38517517 | None:intergenic | 5.0% |
| !!! | TATTTAAAATATAATTTCTT+AGG | + | chr3.4:38517449-38517468 | MS.gene22260:intron | 5.0% |
| AAGCGTGGAAGAGCTCCATT+TGG | - | chr3.4:38519259-38519278 | None:intergenic | 50.0% | |
| AGAGCACAAATACCCCACAG+AGG | + | chr3.4:38518817-38518836 | MS.gene22260:intron | 50.0% | |
| CAGGTGTTTGGATCCCAAAG+AGG | + | chr3.4:38519045-38519064 | MS.gene22260:CDS | 50.0% | |
| CCCAAAGAGGTTGAGAGTCA+TGG | + | chr3.4:38519058-38519077 | MS.gene22260:CDS | 50.0% | |
| CTTGCTCCTCTATAGGTCTG+AGG | + | chr3.4:38517833-38517852 | MS.gene22260:intron | 50.0% | |
| GAGTCTACGTCCAAATCCAC+AGG | - | chr3.4:38520938-38520957 | None:intergenic | 50.0% | |
| GATTACACTCCAAGGTCCCA+AGG | - | chr3.4:38520613-38520632 | None:intergenic | 50.0% | |
| GATTGTTCGAGCTGCAGACA+AGG | + | chr3.4:38519731-38519750 | MS.gene22260:intron | 50.0% | |
| GCACTAAGCATGGTGAGTAC+AGG | + | chr3.4:38519026-38519045 | MS.gene22260:CDS | 50.0% | |
| GCATGGTGAGTACAGGTGTT+TGG | + | chr3.4:38519033-38519052 | MS.gene22260:CDS | 50.0% | |
| GGACGACAAGATCGATCAAG+TGG | + | chr3.4:38518956-38518975 | MS.gene22260:CDS | 50.0% | |
| GGACTAGGGCAAGATTCATG+TGG | + | chr3.4:38519001-38519020 | MS.gene22260:CDS | 50.0% | |
| GGTCTGCAGCCGCAATATAA+CGG | - | chr3.4:38518700-38518719 | None:intergenic | 50.0% | |
| GTCTCAGGTTCAATTCTCCC+TGG | + | chr3.4:38520641-38520660 | MS.gene22260:intron | 50.0% | |
| GTTGTTCAAGACCGTGTCAG+TGG | + | chr3.4:38518980-38518999 | MS.gene22260:CDS | 50.0% | |
| TAGAGGAGCAAGCCTTCACT+AGG | - | chr3.4:38517825-38517844 | None:intergenic | 50.0% | |
| TCCACAGGAAAGTTCTTGCC+AGG | - | chr3.4:38520923-38520942 | None:intergenic | 50.0% | |
| ! | CAAGTATTGTTGGCACCTGG+GGG | - | chr3.4:38517866-38517885 | None:intergenic | 50.0% |
| ! | CCACAATGAGATTGGTCCCT+CGG | + | chr3.4:38517942-38517961 | MS.gene22260:intron | 50.0% |
| ! | CTCGTGATAGCGATGATCAC+TGG | - | chr3.4:38521056-38521075 | None:intergenic | 50.0% |
| ! | GAGTTCACGAGTTGAGCCAA+CGG | + | chr3.4:38519559-38519578 | MS.gene22260:intron | 50.0% |
| ! | GTGAAGGCTTGCTCCTCTAT+AGG | + | chr3.4:38517826-38517845 | MS.gene22260:intron | 50.0% |
| ! | TCTGTGGGGTATTTGTGCTC+TGG | - | chr3.4:38518818-38518837 | None:intergenic | 50.0% |
| !! | AAGACCGTGTCAGTGGACTA+GGG | + | chr3.4:38518987-38519006 | MS.gene22260:CDS | 50.0% |
| !! | ATTCTCCCTGGTGCCGATTT+CGG | + | chr3.4:38520653-38520672 | MS.gene22260:intron | 50.0% |
| !! | GTTGCCGTCTAGCTTTAGTG+AGG | + | chr3.4:38521968-38521987 | MS.gene22260:CDS | 50.0% |
| AAGAAATGGCTGGCATGGCG+TGG | + | chr3.4:38518081-38518100 | MS.gene22260:intron | 55.0% | |
| ACCACGAGGCCAACCCAATT+TGG | - | chr3.4:38520586-38520605 | None:intergenic | 55.0% | |
| CAAGGCCATAAGCTGTGCAG+GGG | - | chr3.4:38518544-38518563 | None:intergenic | 55.0% | |
| CAGATGACTCTGCCCCAAAC+AGG | + | chr3.4:38520221-38520240 | MS.gene22260:CDS | 55.0% | |
| CCAAGGCCATAAGCTGTGCA+GGG | - | chr3.4:38518545-38518564 | None:intergenic | 55.0% | |
| CCGAGGGACCAATCTCATTG+TGG | - | chr3.4:38517945-38517964 | None:intergenic | 55.0% | |
| CTTGCCCTAGTCCACTGACA+CGG | - | chr3.4:38518994-38519013 | None:intergenic | 55.0% | |
| GCATTGTCTCTGAGTCCCCT+TGG | - | chr3.4:38517737-38517756 | None:intergenic | 55.0% | |
| GCCTGGCAAGAACTTTCCTG+TGG | + | chr3.4:38520919-38520938 | MS.gene22260:CDS | 55.0% | |
| GCTGGCGGGATTTCTTATCC+TGG | - | chr3.4:38520847-38520866 | None:intergenic | 55.0% | |
| GTTGTCAGACTGCTGCGATG+CGG | - | chr3.4:38520414-38520433 | None:intergenic | 55.0% | |
| TCCAAGGCCATAAGCTGTGC+AGG | - | chr3.4:38518546-38518565 | None:intergenic | 55.0% | |
| ! | CAAGACCGTGTCAGTGGACT+AGG | + | chr3.4:38518986-38519005 | MS.gene22260:CDS | 55.0% |
| ! | CTGTTTGGGGCAGAGTCATC+TGG | - | chr3.4:38520223-38520242 | None:intergenic | 55.0% |
| ! | GTCTGAGGTTCAAATCCCCC+AGG | + | chr3.4:38517848-38517867 | MS.gene22260:intron | 55.0% |
| !! | GGGCATGTGATGGACATGTG+TGG | - | chr3.4:38519943-38519962 | None:intergenic | 55.0% |
| !! | GTGGTGTTACCTTGGGACCT+TGG | + | chr3.4:38520601-38520620 | MS.gene22260:intron | 55.0% |
| !! | TCCAAATTGGGTTGGCCTCG+TGG | + | chr3.4:38520582-38520601 | MS.gene22260:intron | 55.0% |
| !! | TGGCCTCGTGGTGTTACCTT+GGG | + | chr3.4:38520594-38520613 | MS.gene22260:intron | 55.0% |
| !! | TTGGCCTCGTGGTGTTACCT+TGG | + | chr3.4:38520593-38520612 | MS.gene22260:intron | 55.0% |
| AGCTCACCGAAATCGGCACC+AGG | - | chr3.4:38520662-38520681 | None:intergenic | 60.0% | |
| CCCTGCACAGCTTATGGCCT+TGG | + | chr3.4:38518542-38518561 | MS.gene22260:CDS | 60.0% | |
| CTTCACTAGGCCAACCCCCT+AGG | - | chr3.4:38517812-38517831 | None:intergenic | 60.0% | |
| GCTCACCGAAATCGGCACCA+GGG | - | chr3.4:38520661-38520680 | None:intergenic | 60.0% | |
| GGTCCCAAGGTAACACCACG+AGG | - | chr3.4:38520600-38520619 | None:intergenic | 60.0% | |
| !! | CTAGGGGGTTGGCCTAGTGA+AGG | + | chr3.4:38517810-38517829 | MS.gene22260:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 38517297 | 38522028 | 38517297 | ID=MS.gene22260 |
| chr3.4 | mRNA | 38517297 | 38522028 | 38517297 | ID=MS.gene22260.t1;Parent=MS.gene22260 |
| chr3.4 | exon | 38517297 | 38517303 | 38517297 | ID=MS.gene22260.t1.exon1;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38517297 | 38517303 | 38517297 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38518472 | 38518579 | 38518472 | ID=MS.gene22260.t1.exon2;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38518472 | 38518579 | 38518472 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38518819 | 38519463 | 38518819 | ID=MS.gene22260.t1.exon3;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38518819 | 38519463 | 38518819 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38520182 | 38520261 | 38520182 | ID=MS.gene22260.t1.exon4;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38520182 | 38520261 | 38520182 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38520758 | 38521246 | 38520758 | ID=MS.gene22260.t1.exon5;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38520758 | 38521246 | 38520758 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38521353 | 38521436 | 38521353 | ID=MS.gene22260.t1.exon6;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38521353 | 38521436 | 38521353 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38521770 | 38521858 | 38521770 | ID=MS.gene22260.t1.exon7;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38521770 | 38521858 | 38521770 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| chr3.4 | exon | 38521956 | 38522028 | 38521956 | ID=MS.gene22260.t1.exon8;Parent=MS.gene22260.t1 |
| chr3.4 | CDS | 38521956 | 38522028 | 38521956 | ID=cds.MS.gene22260.t1;Parent=MS.gene22260.t1 |
| Gene Sequence |
| Protein sequence |
