AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22430.t1 MTR_7g101280 93.820 178 11 0 1 178 87 264 2.50e-121 356
MS.gene22430.t1 MTR_0041s0110 93.820 178 11 0 1 178 87 264 2.50e-121 356
MS.gene22430.t1 MTR_7g101275 88.750 160 18 0 1 160 48 207 7.25e-103 301
MS.gene22430.t1 MTR_0041s0120 75.706 177 9 1 1 177 48 190 1.79e-92 275
MS.gene22430.t1 MTR_2g094570 61.364 176 63 2 1 176 67 237 3.13e-66 214
MS.gene22430.t1 MTR_2g094570 61.364 176 63 2 1 176 67 237 3.26e-66 214
MS.gene22430.t1 MTR_2g094570 61.364 176 63 2 1 176 123 293 7.15e-66 214
MS.gene22430.t1 MTR_1g094960 66.216 148 50 0 1 148 74 221 1.09e-64 209
MS.gene22430.t1 MTR_1g064430 67.320 153 42 2 1 148 83 232 5.62e-63 206
MS.gene22430.t1 MTR_1g064430 67.320 153 42 2 1 148 96 245 6.15e-63 206
MS.gene22430.t1 MTR_4g058930 58.889 180 70 3 1 177 66 244 1.53e-60 199
MS.gene22430.t1 MTR_4g058930 58.889 180 70 3 1 177 66 244 2.32e-60 199
MS.gene22430.t1 MTR_3g073420 54.667 150 61 2 1 148 76 220 7.30e-49 166
MS.gene22430.t1 MTR_8g101360 52.000 150 66 2 2 149 94 239 2.85e-46 162
MS.gene22430.t1 MTR_1g024025 51.351 148 69 1 2 149 106 250 6.74e-46 161
MS.gene22430.t1 MTR_4g124900 48.667 150 71 2 2 149 85 230 2.80e-44 156
MS.gene22430.t1 MTR_4g124900 48.667 150 71 2 2 149 85 230 2.98e-44 156
MS.gene22430.t1 MTR_2g043250 49.333 150 70 2 2 149 85 230 7.53e-44 155
MS.gene22430.t1 MTR_2g093740 49.057 159 73 2 1 151 116 274 3.88e-43 152
MS.gene22430.t1 MTR_2g093740 49.057 159 73 2 1 151 116 274 4.93e-43 152
MS.gene22430.t1 MTR_2g093740 49.057 159 73 2 1 151 116 274 5.37e-43 152
MS.gene22430.t1 MTR_2g018690 48.026 152 75 2 2 152 86 234 5.34e-42 149
MS.gene22430.t1 MTR_2g014770 48.684 152 71 1 2 146 108 259 1.06e-41 147
MS.gene22430.t1 MTR_5g061220 50.000 150 61 2 1 145 78 218 1.26e-41 146
MS.gene22430.t1 MTR_2g014770 48.684 152 71 1 2 146 108 259 1.36e-41 147
MS.gene22430.t1 MTR_2g005240 47.682 151 74 2 2 151 85 231 5.51e-41 146
MS.gene22430.t1 MTR_4g060460 48.428 159 74 1 1 151 114 272 1.05e-40 145
MS.gene22430.t1 MTR_4g060460 48.428 159 74 1 1 151 114 272 1.07e-40 145
MS.gene22430.t1 MTR_3g064050 48.366 153 73 3 2 152 89 237 1.83e-40 145
MS.gene22430.t1 MTR_5g076270 47.712 153 74 3 2 152 87 235 2.48e-40 145
MS.gene22430.t1 MTR_8g079492 46.980 149 73 2 2 148 3 147 6.70e-40 144
MS.gene22430.t1 MTR_8g079492 46.980 149 73 2 2 148 85 229 7.67e-40 143
MS.gene22430.t1 MTR_8g079492 46.980 149 73 2 2 148 85 229 7.82e-40 143
MS.gene22430.t1 MTR_4g088210 43.182 176 88 2 2 165 94 269 8.74e-40 143
MS.gene22430.t1 MTR_4g088210 43.182 176 88 2 2 165 94 269 8.86e-40 143
MS.gene22430.t1 MTR_2g093740 45.349 172 73 3 1 151 116 287 1.06e-39 142
MS.gene22430.t1 MTR_5g040880 46.753 154 69 3 1 148 70 216 1.18e-39 141
MS.gene22430.t1 MTR_2g093740 45.349 172 73 3 1 151 116 287 1.20e-39 142
MS.gene22430.t1 MTR_2g093740 45.349 172 73 3 1 151 116 287 1.20e-39 143
MS.gene22430.t1 MTR_2g024430 48.649 148 70 3 1 145 80 224 3.83e-39 139
MS.gene22430.t1 MTR_2g093740 60.748 107 42 0 45 151 38 144 6.55e-39 140
MS.gene22430.t1 MTR_2g093740 60.748 107 42 0 45 151 38 144 6.68e-39 140
MS.gene22430.t1 MTR_8g100050 45.238 168 85 4 2 166 121 284 7.25e-39 140
MS.gene22430.t1 MTR_4g021580 47.333 150 74 2 1 149 80 225 8.53e-39 139
MS.gene22430.t1 MTR_4g021580 47.333 150 74 2 1 149 80 225 1.06e-38 139
MS.gene22430.t1 MTR_8g100050 45.238 168 85 4 2 166 121 284 1.19e-38 140
MS.gene22430.t1 MTR_8g027440 46.711 152 76 2 1 151 90 237 1.64e-37 136
MS.gene22430.t1 MTR_7g062540 46.528 144 74 2 1 144 75 215 5.75e-37 135
MS.gene22430.t1 MTR_2g093740 54.167 120 42 1 45 151 38 157 1.57e-35 131
MS.gene22430.t1 MTR_2g093740 54.167 120 42 1 45 151 38 157 1.67e-35 130
MS.gene22430.t1 MTR_5g040740 45.513 156 69 3 1 147 71 219 4.08e-35 127
MS.gene22430.t1 MTR_5g082140 43.312 157 72 3 1 147 71 220 1.96e-32 120
MS.gene22430.t1 MTR_1g058210 41.892 148 78 2 1 145 71 213 3.69e-32 120
MS.gene22430.t1 MTR_2g006270 41.781 146 82 3 1 145 74 217 2.30e-31 117
MS.gene22430.t1 MTR_8g446900 38.411 151 89 1 1 151 22 168 3.84e-31 116
MS.gene22430.t1 MTR_5g062970 38.028 142 70 3 1 133 94 226 6.42e-26 99.8
MS.gene22430.t1 MTR_2g006380 37.838 148 85 5 1 145 81 224 1.09e-21 91.3
MS.gene22430.t1 MTR_5g060780 33.333 147 73 5 6 145 76 204 1.89e-17 79.0
MS.gene22430.t1 MTR_5g460920 33.333 147 73 5 6 145 76 204 3.50e-17 78.2
MS.gene22430.t1 MTR_5g060630 31.977 172 88 6 1 145 71 240 8.65e-16 74.7
MS.gene22430.t1 MTR_5g460740 31.977 172 88 6 1 145 71 240 8.65e-16 74.7
MS.gene22430.t1 MTR_5g061890 32.000 150 77 5 6 148 76 207 2.19e-15 73.2
MS.gene22430.t1 MTR_5g060770 33.577 137 76 5 6 140 22 145 1.62e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22430.t1 AT2G28350 63.636 154 50 1 1 148 65 218 8.39e-63 205
MS.gene22430.t1 AT2G28350 63.636 154 50 1 1 148 65 218 1.12e-62 205
MS.gene22430.t1 AT4G30080 59.524 168 59 3 1 159 74 241 8.31e-60 197
MS.gene22430.t1 AT1G77850 50.676 148 71 1 1 146 73 220 5.51e-46 159
MS.gene22430.t1 AT1G77850 50.676 148 71 1 1 146 73 220 6.16e-46 159
MS.gene22430.t1 AT1G19220 50.667 150 68 2 2 149 85 230 1.16e-44 157
MS.gene22430.t1 AT5G20730 49.007 151 71 2 2 150 86 232 9.60e-44 155
MS.gene22430.t1 AT5G20730 49.007 151 71 2 2 150 86 232 1.14e-43 154
MS.gene22430.t1 AT5G20730 49.007 151 71 2 2 150 86 232 1.14e-43 154
MS.gene22430.t1 AT1G19850 49.007 151 75 1 2 152 117 265 5.26e-43 152
MS.gene22430.t1 AT1G19850 49.007 151 75 1 2 152 106 254 5.52e-43 152
MS.gene22430.t1 AT1G30330 49.669 151 74 2 2 152 86 234 2.45e-41 148
MS.gene22430.t1 AT1G30330 49.669 151 74 2 2 152 88 236 2.45e-41 148
MS.gene22430.t1 AT1G30330 49.669 151 74 2 2 152 88 236 2.45e-41 148
MS.gene22430.t1 AT5G37020 47.712 153 74 3 2 152 85 233 3.47e-41 147
MS.gene22430.t1 AT5G60450 47.170 159 76 2 1 151 101 259 3.59e-41 147
MS.gene22430.t1 AT5G60450 47.170 159 76 2 1 151 125 283 3.89e-41 147
MS.gene22430.t1 AT5G37020 47.712 153 74 3 2 152 85 233 5.09e-41 147
MS.gene22430.t1 AT1G59750 50.000 150 72 3 2 151 84 230 1.36e-40 145
MS.gene22430.t1 AT1G59750 50.000 150 72 3 2 151 84 230 1.43e-40 145
MS.gene22430.t1 AT1G59750 50.000 150 72 3 2 151 84 230 1.66e-40 145
MS.gene22430.t1 AT1G59750 50.000 150 72 3 2 151 84 230 1.66e-40 145
MS.gene22430.t1 AT2G33860 45.455 154 77 1 2 148 109 262 7.59e-40 142
MS.gene22430.t1 AT3G61830 44.805 154 76 2 2 152 37 184 1.67e-38 138
MS.gene22430.t1 AT3G61830 44.805 154 76 2 2 152 88 235 2.97e-38 138
MS.gene22430.t1 AT5G62000 43.452 168 88 3 2 166 123 286 8.86e-38 137
MS.gene22430.t1 AT5G62000 43.452 168 88 3 2 166 123 286 8.86e-38 137
MS.gene22430.t1 AT5G62000 43.452 168 88 3 2 166 123 286 8.86e-38 137
MS.gene22430.t1 AT5G62000 43.452 168 88 3 2 166 123 286 8.86e-38 137
MS.gene22430.t1 AT5G62000 43.452 168 88 3 2 166 123 286 9.54e-38 137
MS.gene22430.t1 AT5G37020 54.630 108 49 0 45 152 31 138 1.66e-37 136
MS.gene22430.t1 AT4G23980 46.575 146 74 2 2 146 75 217 2.77e-37 135
MS.gene22430.t1 AT4G23980 46.575 146 74 2 2 146 75 217 2.94e-37 135
MS.gene22430.t1 AT2G33860 56.731 104 45 0 45 148 2 105 4.00e-37 133
MS.gene22430.t1 AT2G46530 41.420 169 89 3 2 166 84 246 6.32e-37 134
MS.gene22430.t1 AT2G46530 41.420 169 89 3 2 166 105 267 6.62e-37 134
MS.gene22430.t1 AT1G35520 44.295 149 77 2 2 150 89 231 4.22e-34 126
MS.gene22430.t1 AT1G35540 46.099 141 70 2 6 146 93 227 7.75e-34 125
MS.gene22430.t1 AT1G34310 43.448 145 76 1 6 150 93 231 3.45e-33 124
MS.gene22430.t1 AT1G35240 43.448 145 76 1 6 150 93 231 6.75e-33 123
MS.gene22430.t1 AT1G34410 43.709 151 75 2 2 150 89 231 1.12e-32 122
MS.gene22430.t1 AT2G46530 45.161 124 67 1 44 166 36 159 1.68e-32 121
MS.gene22430.t1 AT1G34390 44.138 145 73 2 2 146 89 225 6.44e-32 120
MS.gene22430.t1 AT1G34170 40.000 155 77 4 2 150 87 231 2.32e-28 110
MS.gene22430.t1 AT1G34170 40.000 155 77 4 2 150 87 231 2.78e-28 110
MS.gene22430.t1 AT1G34170 40.000 155 77 4 2 150 87 231 3.51e-28 110
MS.gene22430.t1 AT1G43950 39.568 139 75 4 6 144 93 222 3.24e-23 92.0
MS.gene22430.t1 AT2G46870 36.082 97 61 1 37 133 27 122 3.68e-13 66.6
MS.gene22430.t1 AT1G01030 34.545 110 66 2 40 144 51 159 3.05e-11 61.2
MS.gene22430.t1 AT3G25730 30.952 126 70 2 45 168 183 293 4.69e-11 60.5
MS.gene22430.t1 AT1G01030 34.545 110 66 2 40 144 51 159 4.72e-11 60.8
MS.gene22430.t1 AT4G01500 31.200 125 73 4 18 133 1 121 6.33e-11 60.1

Find 46 sgRNAs with CRISPR-Local

Find 53 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGTCAGGGTGGAAATT+TGG 0.238329 7.1:-8639549 MS.gene22430:CDS
CATCAACGTGTCTGAAATTA+AGG 0.241218 7.1:-8639919 MS.gene22430:CDS
GCATTTCAGGCATGTTTATA+GGG 0.274751 7.1:-8639730 MS.gene22430:CDS
GGCATTTCAGGCATGTTTAT+AGG 0.293252 7.1:-8639731 MS.gene22430:CDS
ATGGTGAAAAGTGGCATTTC+AGG 0.316984 7.1:-8639743 MS.gene22430:CDS
TGGAAATTTGGTAGTGGAAT+TGG 0.321491 7.1:-8639537 MS.gene22430:CDS
TTGGAATTCGGAGGGCTAAA+AGG 0.363443 7.1:-8639593 MS.gene22430:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7.1:-8639942 MS.gene22430:CDS
AGTGACAAGAAACTTGCTTC+TGG 0.385156 7.1:-8639660 MS.gene22430:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7.1:+8639966 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.392584 7.1:-8639699 MS.gene22430:CDS
AGTTTCTTGTCACTGACATA+TGG 0.394738 7.1:+8639669 None:intergenic
GTTGGAGTCAATCCTTTGTC+AGG 0.400283 7.1:-8639561 MS.gene22430:CDS
GTGAACTTAATGTTGGAATT+CGG 0.402297 7.1:-8639605 MS.gene22430:CDS
GTGACAAGAAACTTGCTTCT+GGG 0.423889 7.1:-8639659 MS.gene22430:CDS
CATCATTATCAAAACTAACT+TGG 0.449861 7.1:+8639952 None:intergenic
GTTGTCAACAAATGCCTCTT+CGG 0.456311 7.1:+8639702 None:intergenic
ATTTGTCCTGCACCACCTTA+CGG 0.476461 7.1:-8639513 MS.gene22430:CDS
GAAAACAGTGAACTTAATGT+TGG 0.494744 7.1:-8639612 MS.gene22430:CDS
TCAGGGTGGAAATTTGGTAG+TGG 0.505938 7.1:-8639543 MS.gene22430:CDS
TTGGGATAGATGTCCTGAAA+AGG 0.529804 7.1:+8639774 None:intergenic
AATCCTCCGTAAGGTGGTGC+AGG 0.533772 7.1:+8639507 None:intergenic
TGACAAGAAACTTGCTTCTG+GGG 0.545499 7.1:-8639658 MS.gene22430:CDS
CCAAATTTCCACCCTGACAA+AGG 0.546733 7.1:+8639549 None:intergenic
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7.1:-8639579 MS.gene22430:CDS
CATTTCAGGCATGTTTATAG+GGG 0.556177 7.1:-8639729 MS.gene22430:CDS
AACTATGGAAATCCTCCGTA+AGG 0.559080 7.1:+8639498 None:intergenic
AGCGTTTCGGCACAATATCT+AGG 0.559188 7.1:+8639828 None:intergenic
GGCATTTGTTGACAACTGGA+TGG 0.569244 7.1:-8639695 MS.gene22430:CDS
AACTTAATGTTGGAATTCGG+AGG 0.572730 7.1:-8639602 MS.gene22430:CDS
AGGATGTACATGGTGAAAAG+TGG 0.579569 7.1:-8639752 MS.gene22430:CDS
TCTGATGCAAACACTGGTGG+TGG 0.592766 7.1:-8639861 MS.gene22430:CDS
ATCTATCCCAAGGATGTACA+TGG 0.592936 7.1:-8639762 MS.gene22430:CDS
GGATAGATGTCCTGAAAAGG+AGG 0.594077 7.1:+8639777 None:intergenic
TTGGAGTCAATCCTTTGTCA+GGG 0.598239 7.1:-8639560 MS.gene22430:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7.1:-8639995 MS.gene22430:CDS
TTTATAGGGGCACGCCGAAG+AGG 0.616360 7.1:-8639716 MS.gene22430:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.616878 7.1:+8639872 None:intergenic
ACACAATCTGATGCAAACAC+TGG 0.627018 7.1:-8639867 MS.gene22430:CDS
ACTTAATGTTGGAATTCGGA+GGG 0.629032 7.1:-8639601 MS.gene22430:CDS
TATGGAAATCCTCCGTAAGG+TGG 0.634599 7.1:+8639501 None:intergenic
GAGTCAATCCTTTGTCAGGG+TGG 0.657457 7.1:-8639557 MS.gene22430:CDS
TGTCCTGCACCACCTTACGG+AGG 0.685773 7.1:-8639510 MS.gene22430:CDS
GATAGATGTCCTGAAAAGGA+GGG 0.691897 7.1:+8639778 None:intergenic
CAATCTGATGCAAACACTGG+TGG 0.725224 7.1:-8639864 MS.gene22430:CDS
TTAGCTGAATAGTCCAAACG+AGG 0.756003 7.1:+8639801 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CATCATTATCAAAACTAACT+TGG + chr7.1:8639565-8639584 None:intergenic 25.0%
! CTAACTTGGTTAATATTCAT+AGG + chr7.1:8639551-8639570 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG - chr7.1:8639563-8639582 MS.gene22430:CDS 25.0%
GAAAACAGTGAACTTAATGT+TGG - chr7.1:8639902-8639921 MS.gene22430:CDS 30.0%
GTGAACTTAATGTTGGAATT+CGG - chr7.1:8639909-8639928 MS.gene22430:CDS 30.0%
AACTTAATGTTGGAATTCGG+AGG - chr7.1:8639912-8639931 MS.gene22430:CDS 35.0%
ACTTAATGTTGGAATTCGGA+GGG - chr7.1:8639913-8639932 MS.gene22430:CDS 35.0%
AGTTTCTTGTCACTGACATA+TGG + chr7.1:8639848-8639867 None:intergenic 35.0%
ATGAAGTGTATGCAAAACTC+AGG - chr7.1:8639519-8639538 MS.gene22430:CDS 35.0%
CATTTCAGGCATGTTTATAG+GGG - chr7.1:8639785-8639804 MS.gene22430:CDS 35.0%
GCATTTCAGGCATGTTTATA+GGG - chr7.1:8639784-8639803 MS.gene22430:CDS 35.0%
GCTAAAAGGCGAAATAATGT+TGG - chr7.1:8639935-8639954 MS.gene22430:CDS 35.0%
! CATCAACGTGTCTGAAATTA+AGG - chr7.1:8639595-8639614 MS.gene22430:CDS 35.0%
! GAGTTTTGCATACACTTCAT+CGG + chr7.1:8639519-8639538 None:intergenic 35.0%
! TTTTCACCATGTACATCCTT+GGG + chr7.1:8639761-8639780 None:intergenic 35.0%
!! TGGAAATTTGGTAGTGGAAT+TGG - chr7.1:8639977-8639996 MS.gene22430:CDS 35.0%
!! TTTGATAATGATGGTGTTGC+TGG - chr7.1:8639572-8639591 MS.gene22430:CDS 35.0%
ACACAATCTGATGCAAACAC+TGG - chr7.1:8639647-8639666 MS.gene22430:CDS 40.0%
AGGATGTACATGGTGAAAAG+TGG - chr7.1:8639762-8639781 MS.gene22430:CDS 40.0%
ATCTATCCCAAGGATGTACA+TGG - chr7.1:8639752-8639771 MS.gene22430:CDS 40.0%
ATGGTGAAAAGTGGCATTTC+AGG - chr7.1:8639771-8639790 MS.gene22430:CDS 40.0%
GATAGATGTCCTGAAAAGGA+GGG + chr7.1:8639739-8639758 None:intergenic 40.0%
GGCATTTCAGGCATGTTTAT+AGG - chr7.1:8639783-8639802 MS.gene22430:CDS 40.0%
GTTGTCAACAAATGCCTCTT+CGG + chr7.1:8639815-8639834 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG + chr7.1:8639645-8639664 None:intergenic 40.0%
TTAGCTGAATAGTCCAAACG+AGG + chr7.1:8639716-8639735 None:intergenic 40.0%
TTGGAGTCAATCCTTTGTCA+GGG - chr7.1:8639954-8639973 MS.gene22430:CDS 40.0%
TTGGGATAGATGTCCTGAAA+AGG + chr7.1:8639743-8639762 None:intergenic 40.0%
! AGTGACAAGAAACTTGCTTC+TGG - chr7.1:8639854-8639873 MS.gene22430:CDS 40.0%
! CTTTTCACCATGTACATCCT+TGG + chr7.1:8639762-8639781 None:intergenic 40.0%
! GTGACAAGAAACTTGCTTCT+GGG - chr7.1:8639855-8639874 MS.gene22430:CDS 40.0%
! TGACAAGAAACTTGCTTCTG+GGG - chr7.1:8639856-8639875 MS.gene22430:CDS 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG - chr7.1:8639815-8639834 MS.gene22430:CDS 40.0%
!! CAAACGAGGAAAAAGCGTTT+CGG + chr7.1:8639702-8639721 None:intergenic 40.0%
!! TTTTCAGGACATCTATCCCA+AGG - chr7.1:8639742-8639761 MS.gene22430:CDS 40.0%
AGCGTTTCGGCACAATATCT+AGG + chr7.1:8639689-8639708 None:intergenic 45.0%
ATTTGTCCTGCACCACCTTA+CGG - chr7.1:8640001-8640020 MS.gene22430:CDS 45.0%
CAATCTGATGCAAACACTGG+TGG - chr7.1:8639650-8639669 MS.gene22430:CDS 45.0%
CCAAATTTCCACCCTGACAA+AGG + chr7.1:8639968-8639987 None:intergenic 45.0%
CCTTTGTCAGGGTGGAAATT+TGG - chr7.1:8639965-8639984 MS.gene22430:CDS 45.0%
GGATAGATGTCCTGAAAAGG+AGG + chr7.1:8639740-8639759 None:intergenic 45.0%
GTTGGAGTCAATCCTTTGTC+AGG - chr7.1:8639953-8639972 MS.gene22430:CDS 45.0%
TATGGAAATCCTCCGTAAGG+TGG + chr7.1:8640016-8640035 None:intergenic 45.0%
TCAGGGTGGAAATTTGGTAG+TGG - chr7.1:8639971-8639990 MS.gene22430:CDS 45.0%
TTGGAATTCGGAGGGCTAAA+AGG - chr7.1:8639921-8639940 MS.gene22430:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG - chr7.1:8639819-8639838 MS.gene22430:CDS 45.0%
! TTCAGCTAACCCTCCTTTTC+AGG - chr7.1:8639727-8639746 MS.gene22430:CDS 45.0%
!!! CGAAACGCTTTTTCCTCGTT+TGG - chr7.1:8639700-8639719 MS.gene22430:CDS 45.0%
GAGTCAATCCTTTGTCAGGG+TGG - chr7.1:8639957-8639976 MS.gene22430:CDS 50.0%
TCTGATGCAAACACTGGTGG+TGG - chr7.1:8639653-8639672 MS.gene22430:CDS 50.0%
AATCCTCCGTAAGGTGGTGC+AGG + chr7.1:8640010-8640029 None:intergenic 55.0%
! TTTATAGGGGCACGCCGAAG+AGG - chr7.1:8639798-8639817 MS.gene22430:CDS 55.0%
TGTCCTGCACCACCTTACGG+AGG - chr7.1:8640004-8640023 MS.gene22430:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 8639500 8640036 8639500 ID=MS.gene22430
chr7.1 mRNA 8639500 8640036 8639500 ID=MS.gene22430.t1;Parent=MS.gene22430
chr7.1 exon 8639500 8640036 8639500 ID=MS.gene22430.t1.exon1;Parent=MS.gene22430.t1
chr7.1 CDS 8639500 8640036 8639500 ID=cds.MS.gene22430.t1;Parent=MS.gene22430.t1
Gene Sequence

>MS.gene22430

ATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATTAAGGATAAACATCAATCTTTTGCGAAAACCTTGACACAATCTGATGCAAACACTGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCCGAAACGCTTTTTCCTCGTTTGGACTATTCAGCTAACCCTCCTTTTCAGGACATCTATCCCAAGGATGTACATGGTGAAAAGTGGCATTTCAGGCATGTTTATAGGGGCACGCCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCATATGTCAGTGACAAGAAACTTGCTTCTGGGGATTCAATTGTGTTTTTGAGATCTGAAAACAGTGAACTTAATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCAATCCTTTGTCAGGGTGGAAATTTGGTAGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATAG
Protein sequence

>MS.gene22430.t1

MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIKDKHQSFAKTLTQSDANTGGGFSCPRYCAETLFPRLDYSANPPFQDIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPYVSDKKLASGDSIVFLRSENSELNVGIRRAKRRNNVGVNPLSGWKFGSGIGICPAPPYGGFP