Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22595.t1 | XP_003611171.1 | 94.1 | 305 | 15 | 2 | 1 | 302 | 1 | 305 | 7.10E-155 | 556.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22595.t1 | P46606 | 77.7 | 296 | 55 | 5 | 1 | 288 | 1 | 293 | 6.1e-123 | 441.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22595.t1 | G7KES2 | 94.1 | 305 | 15 | 2 | 1 | 302 | 1 | 305 | 5.1e-155 | 556.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22595.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22595.t1 | MTR_5g011070 | 98.033 | 305 | 3 | 2 | 1 | 302 | 1 | 305 | 0.0 | 612 |
| MS.gene22595.t1 | MTR_1g012960 | 69.675 | 277 | 80 | 2 | 16 | 289 | 161 | 436 | 3.26e-136 | 393 |
| MS.gene22595.t1 | MTR_3g106400 | 68.679 | 265 | 82 | 1 | 26 | 289 | 107 | 371 | 4.30e-132 | 380 |
| MS.gene22595.t1 | MTR_3g106400 | 68.679 | 265 | 82 | 1 | 26 | 289 | 107 | 371 | 4.31e-132 | 380 |
| MS.gene22595.t1 | MTR_3g106400 | 68.165 | 267 | 84 | 1 | 26 | 291 | 107 | 373 | 6.09e-132 | 381 |
| MS.gene22595.t1 | MTR_4g116545 | 68.401 | 269 | 82 | 1 | 21 | 289 | 66 | 331 | 1.40e-131 | 377 |
| MS.gene22595.t1 | MTR_2g461240 | 68.302 | 265 | 81 | 2 | 24 | 288 | 93 | 354 | 1.38e-129 | 373 |
| MS.gene22595.t1 | MTR_4g116545 | 68.750 | 256 | 77 | 1 | 21 | 276 | 66 | 318 | 2.83e-128 | 369 |
| MS.gene22595.t1 | MTR_1g084060 | 34.375 | 256 | 138 | 5 | 22 | 273 | 16 | 245 | 4.81e-33 | 122 |
| MS.gene22595.t1 | MTR_1g084060 | 34.375 | 256 | 138 | 5 | 22 | 273 | 16 | 245 | 9.85e-33 | 123 |
| MS.gene22595.t1 | MTR_1g017080 | 32.806 | 253 | 145 | 6 | 21 | 273 | 115 | 342 | 6.75e-30 | 117 |
| MS.gene22595.t1 | MTR_5g033720 | 33.858 | 254 | 132 | 6 | 25 | 273 | 72 | 294 | 7.17e-28 | 110 |
| MS.gene22595.t1 | MTR_5g085860 | 30.894 | 246 | 139 | 4 | 28 | 273 | 49 | 263 | 1.16e-23 | 98.6 |
| MS.gene22595.t1 | MTR_2g024390 | 29.317 | 249 | 148 | 4 | 25 | 273 | 117 | 337 | 1.84e-23 | 99.0 |
| MS.gene22595.t1 | MTR_7g065050 | 37.349 | 83 | 50 | 1 | 205 | 287 | 298 | 378 | 5.82e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22595.t1 | AT1G62990 | 78.912 | 294 | 52 | 5 | 1 | 288 | 1 | 290 | 1.55e-167 | 466 |
| MS.gene22595.t1 | AT5G25220 | 66.441 | 295 | 80 | 5 | 8 | 289 | 131 | 419 | 3.01e-135 | 390 |
| MS.gene22595.t1 | AT5G25220 | 66.327 | 294 | 80 | 5 | 8 | 288 | 131 | 418 | 2.27e-134 | 388 |
| MS.gene22595.t1 | AT5G11060 | 68.030 | 269 | 80 | 2 | 21 | 288 | 119 | 382 | 1.92e-131 | 379 |
| MS.gene22595.t1 | AT4G32040 | 61.034 | 290 | 96 | 6 | 13 | 290 | 96 | 380 | 2.28e-116 | 340 |
| MS.gene22595.t1 | AT4G32040 | 61.246 | 289 | 95 | 6 | 13 | 289 | 96 | 379 | 2.81e-116 | 340 |
| MS.gene22595.t1 | AT1G70510 | 33.597 | 253 | 132 | 5 | 25 | 273 | 69 | 289 | 6.00e-33 | 123 |
| MS.gene22595.t1 | AT1G70510 | 32.411 | 253 | 139 | 4 | 25 | 273 | 69 | 293 | 6.37e-32 | 120 |
| MS.gene22595.t1 | AT1G23380 | 34.783 | 253 | 129 | 7 | 25 | 273 | 85 | 305 | 7.95e-32 | 121 |
| MS.gene22595.t1 | AT1G23380 | 34.510 | 255 | 129 | 8 | 25 | 273 | 85 | 307 | 6.91e-30 | 115 |
| MS.gene22595.t1 | AT4G08150 | 30.588 | 255 | 143 | 7 | 25 | 273 | 134 | 360 | 6.80e-27 | 108 |
| MS.gene22595.t1 | AT1G62360 | 29.762 | 252 | 145 | 5 | 25 | 273 | 121 | 343 | 3.63e-22 | 95.5 |
Find 66 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACAATTGCAGATGGATTA+TGG | 0.269485 | 5.2:-3894789 | MS.gene22595:CDS |
| ATTTATTTCAGGAGTGAGTT+TGG | 0.300536 | 5.2:-3894850 | MS.gene22595:intron |
| TCATGCTGTTGAAGCTGTTA+TGG | 0.321045 | 5.2:-3897293 | MS.gene22595:CDS |
| AGCTGAAGCAAATCAATAAT+TGG | 0.323659 | 5.2:-3894107 | MS.gene22595:CDS |
| AGTCGAGAATTGAAGATGTA+AGG | 0.343450 | 5.2:-3894528 | MS.gene22595:CDS |
| ATGTAAGGGAGGAAATATTA+AGG | 0.375793 | 5.2:-3894513 | MS.gene22595:CDS |
| TTTATTTCAGGAGTGAGTTT+GGG | 0.389051 | 5.2:-3894849 | MS.gene22595:intron |
| ATGATGCAGGGTGGTGGTTA+CGG | 0.412986 | 5.2:-3897972 | MS.gene22595:CDS |
| AAGAAGAGCTGGAAAATTAC+CGG | 0.413561 | 5.2:-3894488 | MS.gene22595:CDS |
| TTAATCAAAGGAAAAGAAAC+TGG | 0.420427 | 5.2:-3894080 | MS.gene22595:CDS |
| GGTGGTTACGGTGGAGATGG+TGG | 0.421050 | 5.2:-3897960 | MS.gene22595:CDS |
| ATCAATGGTAACTGATCTAT+AGG | 0.425631 | 5.2:+3897843 | None:intergenic |
| TATACCTGTGAGGGCTTGTA+AGG | 0.438851 | 5.2:+3897249 | None:intergenic |
| CAACTTCAGTCTTAAAGAAC+TGG | 0.439479 | 5.2:-3894459 | MS.gene22595:CDS |
| GGTGGTGGTTACGGTGGAGA+TGG | 0.446536 | 5.2:-3897963 | MS.gene22595:CDS |
| ATATCTACTATTATATCTCT+TGG | 0.447639 | 5.2:+3893866 | None:intergenic |
| ACTCAAAATTGAGCTCAAAC+AGG | 0.455659 | 5.2:-3894661 | MS.gene22595:intron |
| TATCTCTTGGTGCATCTCAC+TGG | 0.459765 | 5.2:+3893879 | None:intergenic |
| GTGAGTTTGGGAGAAGGAAG+TGG | 0.468312 | 5.2:-3894837 | MS.gene22595:CDS |
| TCAGGAGTGAGTTTGGGAGA+AGG | 0.470466 | 5.2:-3894843 | MS.gene22595:intron |
| GAAATGCAAGAACCAAGCTT+AGG | 0.481189 | 5.2:-3897996 | MS.gene22595:CDS |
| CTCTTGGTGCATCTCACTGG+TGG | 0.481516 | 5.2:+3893882 | None:intergenic |
| GTCGAGAATTGAAGATGTAA+GGG | 0.496418 | 5.2:-3894527 | MS.gene22595:CDS |
| GCAAAACTTGTGGAGGAGAC+AGG | 0.501622 | 5.2:-3894135 | MS.gene22595:CDS |
| GATAACTGAGCATCAATCAA+TGG | 0.510534 | 5.2:+3897828 | None:intergenic |
| AAATGCAAGAACCAAGCTTA+GGG | 0.512228 | 5.2:-3897995 | MS.gene22595:CDS |
| TCTTGGTGCATCTCACTGGT+GGG | 0.521682 | 5.2:+3893883 | None:intergenic |
| TCAGACTCAGTAGGAAGTAA+TGG | 0.521928 | 5.2:+3894714 | None:intergenic |
| CCCTGCATCATCCCTAAGCT+TGG | 0.523912 | 5.2:+3897984 | None:intergenic |
| CTTGCGTTTCGACTTCAAAG+AGG | 0.527244 | 5.2:+3894035 | None:intergenic |
| ACCAAGCTTAGGGATGATGC+AGG | 0.529707 | 5.2:-3897985 | MS.gene22595:CDS |
| AATTAACATACAGTTGGGTA+AGG | 0.529902 | 5.2:+3894415 | None:intergenic |
| CTGGCACAGTAATTCTCAAT+CGG | 0.541137 | 5.2:-3894061 | MS.gene22595:CDS |
| GATAATCAGTCAAGTGGTGG+TGG | 0.545093 | 5.2:-3894762 | MS.gene22595:CDS |
| GATCATGACATGATGGGACT+TGG | 0.548603 | 5.2:-3894738 | MS.gene22595:CDS |
| ATATTAAGGAAAAGAAGAGC+TGG | 0.550111 | 5.2:-3894499 | MS.gene22595:CDS |
| ATAATTGGTTCATTAATCAA+AGG | 0.552236 | 5.2:-3894092 | MS.gene22595:CDS |
| TGAGTCTGAAAGGTCACTCA+TGG | 0.556600 | 5.2:-3894700 | MS.gene22595:CDS |
| TACTTCCTACTGAGTCTGAA+AGG | 0.572737 | 5.2:-3894710 | MS.gene22595:CDS |
| TGGTGGTGATCATGACATGA+TGG | 0.573965 | 5.2:-3894745 | MS.gene22595:CDS |
| GGTTACGGTGGAGATGGTGG+CGG | 0.578578 | 5.2:-3897957 | MS.gene22595:CDS |
| TTAGGGATGATGCAGGGTGG+TGG | 0.582325 | 5.2:-3897978 | MS.gene22595:CDS |
| GAGAATTGAAGATGTAAGGG+AGG | 0.587683 | 5.2:-3894524 | MS.gene22595:CDS |
| CGGTGAGAACAGACAACTGA+AGG | 0.590615 | 5.2:-3897937 | MS.gene22595:CDS |
| AAGACTGAAGTTGTGTCACC+CGG | 0.596174 | 5.2:+3894469 | None:intergenic |
| TGAAGATGAACAATTGCAGA+TGG | 0.612178 | 5.2:-3894796 | MS.gene22595:CDS |
| AATACCTTACAAGCCCTCAC+AGG | 0.617490 | 5.2:-3897253 | MS.gene22595:intron |
| GGTTTAGATAATCAGTCAAG+TGG | 0.617841 | 5.2:-3894768 | MS.gene22595:CDS |
| CAGTGTACATATACCTGTGA+GGG | 0.621411 | 5.2:+3897240 | None:intergenic |
| CTTTGAAGTCGAAACGCAAG+AGG | 0.621918 | 5.2:-3894032 | MS.gene22595:intron |
| AGTGACCTTTCAGACTCAGT+AGG | 0.626978 | 5.2:+3894705 | None:intergenic |
| AGAAGAGCTGGAAAATTACC+GGG | 0.627133 | 5.2:-3894487 | MS.gene22595:CDS |
| TGACAAAGCAAAACTTGTGG+AGG | 0.628394 | 5.2:-3894142 | MS.gene22595:CDS |
| AGGAAGTGGTGCGATGATGT+CGG | 0.629572 | 5.2:-3894823 | MS.gene22595:CDS |
| CTTCAGTCTTAAAGAACTGG+TGG | 0.629856 | 5.2:-3894456 | MS.gene22595:CDS |
| GACAGAAGCTGTTCATACAA+AGG | 0.633295 | 5.2:+3897897 | None:intergenic |
| ATGCAGGGTGGTGGTTACGG+TGG | 0.643110 | 5.2:-3897969 | MS.gene22595:CDS |
| TCGAGTTGTTGACGATCATG+AGG | 0.644871 | 5.2:+3897750 | None:intergenic |
| GGTGGTGATCATGACATGAT+GGG | 0.646696 | 5.2:-3894744 | MS.gene22595:CDS |
| TGAGAACAGACAACTGAAGG+CGG | 0.661001 | 5.2:-3897934 | MS.gene22595:CDS |
| TTAGATAATCAGTCAAGTGG+TGG | 0.661336 | 5.2:-3894765 | MS.gene22595:CDS |
| AGATGACAAAGCAAAACTTG+TGG | 0.663448 | 5.2:-3894145 | MS.gene22595:CDS |
| GGTGGCAGCAACATGCAAAG+TGG | 0.673948 | 5.2:-3894438 | MS.gene22595:CDS |
| CCAAGCTTAGGGATGATGCA+GGG | 0.690210 | 5.2:-3897984 | MS.gene22595:CDS |
| GCAGTGTACATATACCTGTG+AGG | 0.695254 | 5.2:+3897239 | None:intergenic |
| AGCTTAGGGATGATGCAGGG+TGG | 0.716120 | 5.2:-3897981 | MS.gene22595:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAATTTTTTTTATTA+TGG | - | chr5.2:3894777-3894796 | MS.gene22595:CDS | 0.0% |
| !! | AGTTTAAAAATAATAATAAC+AGG | - | chr5.2:3895524-3895543 | MS.gene22595:intron | 10.0% |
| !! | ATTAATTAATTAATGTAATC+CGG | - | chr5.2:3895165-3895184 | MS.gene22595:intron | 10.0% |
| !! | GATTTATTAAACAATAAAAT+GGG | + | chr5.2:3896571-3896590 | None:intergenic | 10.0% |
| !! | TATTGTTTAATAAATCATTT+GGG | - | chr5.2:3896575-3896594 | MS.gene22595:intron | 10.0% |
| !! | TGATTTATTAAACAATAAAA+TGG | + | chr5.2:3896572-3896591 | None:intergenic | 10.0% |
| !! | TTATTGTTTAATAAATCATT+TGG | - | chr5.2:3896574-3896593 | MS.gene22595:intron | 10.0% |
| !! | ACTCTTAATTCTTTATTATA+TGG | - | chr5.2:3897236-3897255 | MS.gene22595:intron | 15.0% |
| !! | ATTTAACAAATCAATTAAAG+TGG | + | chr5.2:3894432-3894451 | None:intergenic | 15.0% |
| !! | CATTAGAAATAATTATACAT+GGG | + | chr5.2:3896615-3896634 | None:intergenic | 15.0% |
| !! | TAGTTATATTAATCTCTTAT+AGG | - | chr5.2:3894983-3895002 | MS.gene22595:intron | 15.0% |
| !! | TCATTAGAAATAATTATACA+TGG | + | chr5.2:3896616-3896635 | None:intergenic | 15.0% |
| !!! | AATACCAATAATATGTTTTT+AGG | - | chr5.2:3894925-3894944 | MS.gene22595:intron | 15.0% |
| !!! | AGATTATGTATTAATTTGTA+GGG | - | chr5.2:3897313-3897332 | MS.gene22595:CDS | 15.0% |
| !!! | ATTTTAACCAATAAAATAAG+TGG | + | chr5.2:3894875-3894894 | None:intergenic | 15.0% |
| !!! | TAATTTAAAAAACATTGACT+AGG | + | chr5.2:3896320-3896339 | None:intergenic | 15.0% |
| !!! | TTCCAAGATATAATTTTTTT+GGG | - | chr5.2:3896135-3896154 | MS.gene22595:intron | 15.0% |
| !! | AAAGTTAATTAACATACAGT+TGG | + | chr5.2:3897463-3897482 | None:intergenic | 20.0% |
| !! | AAGAACTTGTAAATAACTTT+AGG | + | chr5.2:3895765-3895784 | None:intergenic | 20.0% |
| !! | AAGTTAATTAACATACAGTT+GGG | + | chr5.2:3897462-3897481 | None:intergenic | 20.0% |
| !! | ACAATCTAAAAGATGTATTT+AGG | + | chr5.2:3895953-3895972 | None:intergenic | 20.0% |
| !! | ACATAATCTCATTTATCAAT+TGG | + | chr5.2:3897302-3897321 | None:intergenic | 20.0% |
| !! | ACTTATTTGAAGATTGTTTA+AGG | + | chr5.2:3896712-3896731 | None:intergenic | 20.0% |
| !! | AGAGAAAATATTATTTCAGT+TGG | - | chr5.2:3896294-3896313 | MS.gene22595:intron | 20.0% |
| !! | ATAAGTTATGAAAAAACTTG+TGG | - | chr5.2:3894731-3894750 | MS.gene22595:CDS | 20.0% |
| !! | ATATTAATCTCTTATAGGTT+AGG | - | chr5.2:3894988-3895007 | MS.gene22595:intron | 20.0% |
| !! | ATATTTGCATAGAACAATTA+AGG | - | chr5.2:3895818-3895837 | MS.gene22595:intron | 20.0% |
| !! | ATGTATTTATTTGATCTTAC+CGG | - | chr5.2:3894197-3894216 | MS.gene22595:intron | 20.0% |
| !! | GAAAGTAAAAAAAACTAAAC+TGG | - | chr5.2:3896079-3896098 | MS.gene22595:intron | 20.0% |
| !! | GTATACACAAATTAATTAGT+TGG | - | chr5.2:3895193-3895212 | MS.gene22595:intron | 20.0% |
| !! | GTTATGATTAATTAGTTACA+AGG | + | chr5.2:3896687-3896706 | None:intergenic | 20.0% |
| !! | TACATCTTAATCATACATAA+AGG | + | chr5.2:3896415-3896434 | None:intergenic | 20.0% |
| !! | TTACATGGAATAAATATACA+TGG | - | chr5.2:3896761-3896780 | MS.gene22595:intron | 20.0% |
| !! | TTTCATTAATTATGATGTAC+TGG | - | chr5.2:3896191-3896210 | MS.gene22595:intron | 20.0% |
| !! | TTTGATGTCAAAATTTGATA+TGG | - | chr5.2:3896944-3896963 | MS.gene22595:intron | 20.0% |
| !!! | AAATACATCTTTTAGATTGT+CGG | - | chr5.2:3895953-3895972 | MS.gene22595:intron | 20.0% |
| !!! | AATATTTTCTCTTAAAGTGA+AGG | + | chr5.2:3896286-3896305 | None:intergenic | 20.0% |
| !!! | AGGAAAATTCTGAAATTAAT+AGG | + | chr5.2:3895427-3895446 | None:intergenic | 20.0% |
| !!! | ATAATTGGTTCATTAATCAA+AGG | - | chr5.2:3897777-3897796 | MS.gene22595:CDS | 20.0% |
| !!! | ATTTCAGTTCAATTTTGTTT+AGG | - | chr5.2:3896860-3896879 | MS.gene22595:intron | 20.0% |
| !!! | CAAATTTTGACATCAAATTA+TGG | + | chr5.2:3896941-3896960 | None:intergenic | 20.0% |
| !!! | CTTCCAAGATATAATTTTTT+TGG | - | chr5.2:3896134-3896153 | MS.gene22595:intron | 20.0% |
| !!! | CTTTTTAAAAAAAGTTGTGT+TGG | - | chr5.2:3895725-3895744 | MS.gene22595:intron | 20.0% |
| !!! | GAGATTATGTATTAATTTGT+AGG | - | chr5.2:3897312-3897331 | MS.gene22595:CDS | 20.0% |
| !!! | TATTCTTCTAAAGCTATTTT+TGG | - | chr5.2:3895088-3895107 | MS.gene22595:intron | 20.0% |
| !!! | TCCAAGATATAATTTTTTTG+GGG | - | chr5.2:3896136-3896155 | MS.gene22595:intron | 20.0% |
| !!! | TGTAGTATTGAATTTATTTC+AGG | - | chr5.2:3897008-3897027 | MS.gene22595:intron | 20.0% |
| !!! | TTTACTTCCACTTATTTTAT+TGG | - | chr5.2:3894865-3894884 | MS.gene22595:intron | 20.0% |
| ! | AACTAATCTGGTTAATATCA+CGG | - | chr5.2:3897690-3897709 | MS.gene22595:intron | 25.0% |
| ! | AGTGCCTAAAAACATATTAT+TGG | + | chr5.2:3894932-3894951 | None:intergenic | 25.0% |
| ! | ATAGACTAATTCTTCTAATC+GGG | + | chr5.2:3895481-3895500 | None:intergenic | 25.0% |
| ! | CATAGACTAATTCTTCTAAT+CGG | + | chr5.2:3895482-3895501 | None:intergenic | 25.0% |
| ! | CTTAATCATACATAAAGGAA+AGG | + | chr5.2:3896410-3896429 | None:intergenic | 25.0% |
| ! | GCTAATTTAAATAAGCTGAT+TGG | + | chr5.2:3895370-3895389 | None:intergenic | 25.0% |
| ! | TAATAATAACAGGAGACATT+TGG | - | chr5.2:3895534-3895553 | MS.gene22595:intron | 25.0% |
| ! | TCCATAACAAGATTATAGTT+CGG | + | chr5.2:3895329-3895348 | None:intergenic | 25.0% |
| ! | TGATTAATTAGTTACAAGGA+CGG | + | chr5.2:3896683-3896702 | None:intergenic | 25.0% |
| ! | TTAATCAAAGGAAAAGAAAC+TGG | - | chr5.2:3897789-3897808 | MS.gene22595:CDS | 25.0% |
| !! | AACTAATTTGCCATATATGT+TGG | - | chr5.2:3894478-3894497 | MS.gene22595:CDS | 25.0% |
| !! | ACACCAAAAAAAATGAGTTT+TGG | + | chr5.2:3894319-3894338 | None:intergenic | 25.0% |
| !! | ACTATAATCTTGTTATGGAA+AGG | - | chr5.2:3895330-3895349 | MS.gene22595:intron | 25.0% |
| !! | ATATATACCCTTTTACTGTT+AGG | - | chr5.2:3895673-3895692 | MS.gene22595:intron | 25.0% |
| !! | GAACTTTATGAACTTTAAAG+TGG | + | chr5.2:3894679-3894698 | None:intergenic | 25.0% |
| !! | TAATTTGTGTATACTCTTTC+CGG | + | chr5.2:3895187-3895206 | None:intergenic | 25.0% |
| !! | TTTCAGAATTTTCCTACATA+TGG | - | chr5.2:3895432-3895451 | MS.gene22595:intron | 25.0% |
| !!! | AATTTCCCTTAGTTTTGTTT+CGG | - | chr5.2:3896913-3896932 | MS.gene22595:intron | 25.0% |
| !!! | CTTCCAAAACTCATTTTTTT+TGG | - | chr5.2:3894313-3894332 | MS.gene22595:intron | 25.0% |
| !!! | GTAAGGTATTTTCAATATCA+CGG | + | chr5.2:3894606-3894625 | None:intergenic | 25.0% |
| !!! | TTATGAACTTTAAAGTGGTA+CGG | + | chr5.2:3894674-3894693 | None:intergenic | 25.0% |
| !!! | TTTTTGGTGTGATTAATTTG+AGG | - | chr5.2:3894329-3894348 | MS.gene22595:intron | 25.0% |
| AAAGATAATCCCGATATGTT+AGG | - | chr5.2:3895605-3895624 | MS.gene22595:intron | 30.0% | |
| AATTAACATACAGTTGGGTA+AGG | + | chr5.2:3897457-3897476 | None:intergenic | 30.0% | |
| ACCGAACTATAATCTTGTTA+TGG | - | chr5.2:3895325-3895344 | MS.gene22595:intron | 30.0% | |
| ACTGTTTATCCAAACAACTT+CGG | - | chr5.2:3894830-3894849 | MS.gene22595:CDS | 30.0% | |
| AGCTGAAGCAAATCAATAAT+TGG | - | chr5.2:3897762-3897781 | MS.gene22595:CDS | 30.0% | |
| ATAATATGCTTGCATGCATA+TGG | + | chr5.2:3896838-3896857 | None:intergenic | 30.0% | |
| ATAATTTGAAGACGTGCATA+AGG | + | chr5.2:3896261-3896280 | None:intergenic | 30.0% | |
| ATATTAAGGAAAAGAAGAGC+TGG | - | chr5.2:3897370-3897389 | MS.gene22595:intron | 30.0% | |
| ATCAATGGTAACTGATCTAT+AGG | + | chr5.2:3894029-3894048 | None:intergenic | 30.0% | |
| ATGTAAGGGAGGAAATATTA+AGG | - | chr5.2:3897356-3897375 | MS.gene22595:intron | 30.0% | |
| ATTATAACACCGAAGTTGTT+TGG | + | chr5.2:3894842-3894861 | None:intergenic | 30.0% | |
| ATTCTTTGTAAATCAGTGTC+GGG | + | chr5.2:3897591-3897610 | None:intergenic | 30.0% | |
| ATTTATTTCAGGAGTGAGTT+TGG | - | chr5.2:3897019-3897038 | MS.gene22595:intron | 30.0% | |
| CAAACTAAACTCTTCCAAAT+TGG | + | chr5.2:3895230-3895249 | None:intergenic | 30.0% | |
| CAATTTGGAAGAGTTTAGTT+TGG | - | chr5.2:3895228-3895247 | MS.gene22595:intron | 30.0% | |
| CAGTTACACTCATATTTACA+TGG | - | chr5.2:3896746-3896765 | MS.gene22595:intron | 30.0% | |
| CGGTGAATTTAACATAATCA+CGG | - | chr5.2:3895973-3895992 | MS.gene22595:intron | 30.0% | |
| GAATGAATCTTGTGTGTATT+TGG | + | chr5.2:3897614-3897633 | None:intergenic | 30.0% | |
| GATTCTTTGTAAATCAGTGT+CGG | + | chr5.2:3897592-3897611 | None:intergenic | 30.0% | |
| GCCCCAAAAAAATTATATCT+TGG | + | chr5.2:3896140-3896159 | None:intergenic | 30.0% | |
| TAATTTGAAGACGTGCATAA+GGG | + | chr5.2:3896260-3896279 | None:intergenic | 30.0% | |
| TAGTAAAATTCATGGCTTTC+TGG | - | chr5.2:3894354-3894373 | MS.gene22595:intron | 30.0% | |
| TCTAATGAGAAATTGCAAAG+TGG | - | chr5.2:3896628-3896647 | MS.gene22595:intron | 30.0% | |
| TTCTCATAGTACGAAAAGAA+TGG | + | chr5.2:3896043-3896062 | None:intergenic | 30.0% | |
| TTGAGGCTTAGTAAAATTCA+TGG | - | chr5.2:3894346-3894365 | MS.gene22595:intron | 30.0% | |
| TTTATTTCAGGAGTGAGTTT+GGG | - | chr5.2:3897020-3897039 | MS.gene22595:intron | 30.0% | |
| ! | AATTTTATCTTCTCCGAAAC+TGG | + | chr5.2:3897539-3897558 | None:intergenic | 30.0% |
| ! | TAATTTGCCATATATGTTGG+TGG | - | chr5.2:3894481-3894500 | MS.gene22595:CDS | 30.0% |
| ! | TGTACACTAGTACGATTTTA+AGG | + | chr5.2:3895792-3895811 | None:intergenic | 30.0% |
| !!! | AAGCTATTTTTGGTGGATTT+TGG | - | chr5.2:3895098-3895117 | MS.gene22595:intron | 30.0% |
| !!! | AGCTTACAGTTTTGATTTTG+TGG | - | chr5.2:3895646-3895665 | MS.gene22595:intron | 30.0% |
| !!! | TCTTCTAAAGCTATTTTTGG+TGG | - | chr5.2:3895091-3895110 | MS.gene22595:intron | 30.0% |
| AAGAAGAGCTGGAAAATTAC+CGG | - | chr5.2:3897381-3897400 | MS.gene22595:intron | 35.0% | |
| AAGCATTACCTTGGTTGAAT+AGG | - | chr5.2:3895845-3895864 | MS.gene22595:intron | 35.0% | |
| AATAACAGGAGACATTTGGA+AGG | - | chr5.2:3895538-3895557 | MS.gene22595:intron | 35.0% | |
| AATGAAAAGCTGTTCATGTC+TGG | - | chr5.2:3896536-3896555 | MS.gene22595:intron | 35.0% | |
| ACAAGATTATAGTTCGGTTG+TGG | + | chr5.2:3895323-3895342 | None:intergenic | 35.0% | |
| ACTCAAAATTGAGCTCAAAC+AGG | - | chr5.2:3897208-3897227 | MS.gene22595:intron | 35.0% | |
| AGAAATTACATGCAGAAGGA+AGG | + | chr5.2:3897486-3897505 | None:intergenic | 35.0% | |
| AGATGACAAAGCAAAACTTG+TGG | - | chr5.2:3897724-3897743 | MS.gene22595:intron | 35.0% | |
| AGCATTACCTTGGTTGAATA+GGG | - | chr5.2:3895846-3895865 | MS.gene22595:intron | 35.0% | |
| AGTCGAGAATTGAAGATGTA+AGG | - | chr5.2:3897341-3897360 | MS.gene22595:CDS | 35.0% | |
| AGTGTTCTACTTCCATATGT+AGG | + | chr5.2:3895447-3895466 | None:intergenic | 35.0% | |
| ATAACAGGAGACATTTGGAA+GGG | - | chr5.2:3895539-3895558 | MS.gene22595:intron | 35.0% | |
| ATGGAACCGAAACAAAACTA+AGG | + | chr5.2:3896922-3896941 | None:intergenic | 35.0% | |
| ATGTCCATCATTGATGTTGT+TGG | - | chr5.2:3896369-3896388 | MS.gene22595:intron | 35.0% | |
| ATGTGTCAACAAAACTTGAC+CGG | + | chr5.2:3894219-3894238 | None:intergenic | 35.0% | |
| CAAACAACCACCAACATATA+TGG | + | chr5.2:3894491-3894510 | None:intergenic | 35.0% | |
| CAACTTCAGTCTTAAAGAAC+TGG | - | chr5.2:3897410-3897429 | MS.gene22595:intron | 35.0% | |
| CAAGATTATAGTTCGGTTGT+GGG | + | chr5.2:3895322-3895341 | None:intergenic | 35.0% | |
| CTAGTAGCCTAACAGTAAAA+GGG | + | chr5.2:3895683-3895702 | None:intergenic | 35.0% | |
| GAGAGCAATGTAGTTACATA+AGG | + | chr5.2:3896497-3896516 | None:intergenic | 35.0% | |
| GATAACTGAGCATCAATCAA+TGG | + | chr5.2:3894044-3894063 | None:intergenic | 35.0% | |
| GATCAGAAATTACATGCAGA+AGG | + | chr5.2:3897490-3897509 | None:intergenic | 35.0% | |
| GGTTTAGATAATCAGTCAAG+TGG | - | chr5.2:3897101-3897120 | MS.gene22595:intron | 35.0% | |
| GTATCCATGGCTATTTAAGT+AGG | - | chr5.2:3896213-3896232 | MS.gene22595:intron | 35.0% | |
| GTCGAGAATTGAAGATGTAA+GGG | - | chr5.2:3897342-3897361 | MS.gene22595:CDS | 35.0% | |
| TAAGGAATCAAGCATTACCT+TGG | - | chr5.2:3895836-3895855 | MS.gene22595:intron | 35.0% | |
| TCATCCTACTTAAATAGCCA+TGG | + | chr5.2:3896220-3896239 | None:intergenic | 35.0% | |
| TCCATCAAAATCCTCTTTGT+TGG | + | chr5.2:3894391-3894410 | None:intergenic | 35.0% | |
| TGAAGATGAACAATTGCAGA+TGG | - | chr5.2:3897073-3897092 | MS.gene22595:intron | 35.0% | |
| TGACAGAAAGCCTAACATAT+CGG | + | chr5.2:3895618-3895637 | None:intergenic | 35.0% | |
| TGGAACCGAAACAAAACTAA+GGG | + | chr5.2:3896921-3896940 | None:intergenic | 35.0% | |
| TGGTTACATAGCAACCAATT+TGG | - | chr5.2:3895213-3895232 | MS.gene22595:intron | 35.0% | |
| TTAGATAATCAGTCAAGTGG+TGG | - | chr5.2:3897104-3897123 | MS.gene22595:intron | 35.0% | |
| TTCGTACTATGAGAAATGCT+AGG | - | chr5.2:3896048-3896067 | MS.gene22595:intron | 35.0% | |
| TTGGCTAATCTGAAGAAAGT+GGG | - | chr5.2:3895117-3895136 | MS.gene22595:intron | 35.0% | |
| TTTGGCTAATCTGAAGAAAG+TGG | - | chr5.2:3895116-3895135 | MS.gene22595:intron | 35.0% | |
| ! | ATCCACATCGACTAACATTA+GGG | - | chr5.2:3896468-3896487 | MS.gene22595:intron | 35.0% |
| ! | CGTATGTTTAGTTCCAGTTT+CGG | - | chr5.2:3897523-3897542 | MS.gene22595:intron | 35.0% |
| ! | CTTTATTTGTGCCAACAAAG+AGG | - | chr5.2:3894377-3894396 | MS.gene22595:intron | 35.0% |
| ! | CTTTTACTGTTAGGCTACTA+GGG | - | chr5.2:3895682-3895701 | MS.gene22595:intron | 35.0% |
| ! | GACATGAACAGCTTTTCATT+TGG | + | chr5.2:3896536-3896555 | None:intergenic | 35.0% |
| ! | GTTAGGCATATGTTGTTGTT+TGG | - | chr5.2:3895005-3895024 | MS.gene22595:intron | 35.0% |
| ! | TCATTTGGAAGTTTGAGACA+TGG | + | chr5.2:3896521-3896540 | None:intergenic | 35.0% |
| ! | TTATGATGTACTGGTATCCA+TGG | - | chr5.2:3896200-3896219 | MS.gene22595:intron | 35.0% |
| ! | TTTTACTGTTAGGCTACTAG+GGG | - | chr5.2:3895683-3895702 | MS.gene22595:intron | 35.0% |
| ! | TTTTGTTCCTAATTACCAGC+TGG | - | chr5.2:3897891-3897910 | MS.gene22595:CDS | 35.0% |
| !! | ACAAAGAGGATTTTGATGGA+TGG | - | chr5.2:3894391-3894410 | MS.gene22595:intron | 35.0% |
| !! | ATGTTGTTGTTTGGTTTGGT+GGG | - | chr5.2:3895014-3895033 | MS.gene22595:intron | 35.0% |
| !! | CAAAGAGGATTTTGATGGAT+GGG | - | chr5.2:3894392-3894411 | MS.gene22595:intron | 35.0% |
| !! | CATATATGTTGGTGGTTGTT+TGG | - | chr5.2:3894489-3894508 | MS.gene22595:CDS | 35.0% |
| !! | GAACAATTGCAGATGGATTA+TGG | - | chr5.2:3897080-3897099 | MS.gene22595:intron | 35.0% |
| !! | GAAGTTGATGCTATAAGGAA+TGG | + | chr5.2:3896118-3896137 | None:intergenic | 35.0% |
| !! | GCATATGTTGTTGTTTGGTT+TGG | - | chr5.2:3895010-3895029 | MS.gene22595:intron | 35.0% |
| !! | TAGCTGGAGTGTGTTTTTAA+GGG | - | chr5.2:3895891-3895910 | MS.gene22595:intron | 35.0% |
| !! | TATGTTGTTGTTTGGTTTGG+TGG | - | chr5.2:3895013-3895032 | MS.gene22595:intron | 35.0% |
| !! | TCTTGGAAGTTGATGCTATA+AGG | + | chr5.2:3896123-3896142 | None:intergenic | 35.0% |
| !! | TGGAAGAGTTTAGTTTGGTA+AGG | - | chr5.2:3895233-3895252 | MS.gene22595:intron | 35.0% |
| !!! | AATTTTTTTGGGGCAATGCT+AGG | - | chr5.2:3896146-3896165 | MS.gene22595:intron | 35.0% |
| AAGCTTATTACGTGTGTCGT+TGG | + | chr5.2:3897662-3897681 | None:intergenic | 40.0% | |
| ACTCCAGCTAGGTTAAAACA+CGG | + | chr5.2:3895881-3895900 | None:intergenic | 40.0% | |
| AGAAGAGCTGGAAAATTACC+GGG | - | chr5.2:3897382-3897401 | MS.gene22595:intron | 40.0% | |
| ATGTTAGTCGATGTGGATGA+TGG | + | chr5.2:3896466-3896485 | None:intergenic | 40.0% | |
| CAGTGTACATATACCTGTGA+GGG | + | chr5.2:3894632-3894651 | None:intergenic | 40.0% | |
| CCTAGTAGCCTAACAGTAAA+AGG | + | chr5.2:3895684-3895703 | None:intergenic | 40.0% | |
| CTGGCACAGTAATTCTCAAT+CGG | - | chr5.2:3897808-3897827 | MS.gene22595:CDS | 40.0% | |
| CTTAAAAACACACTCCAGCT+AGG | + | chr5.2:3895892-3895911 | None:intergenic | 40.0% | |
| CTTCAGTCTTAAAGAACTGG+TGG | - | chr5.2:3897413-3897432 | MS.gene22595:intron | 40.0% | |
| GACAGAAAGCCTAACATATC+GGG | + | chr5.2:3895617-3895636 | None:intergenic | 40.0% | |
| GACAGAAGCTGTTCATACAA+AGG | + | chr5.2:3893975-3893994 | None:intergenic | 40.0% | |
| GAGAATTGAAGATGTAAGGG+AGG | - | chr5.2:3897345-3897364 | MS.gene22595:CDS | 40.0% | |
| GCACACAAACAAGAGATATC+AGG | + | chr5.2:3895577-3895596 | None:intergenic | 40.0% | |
| GGTTTCATATCATGGTTGGA+GGG | + | chr5.2:3895282-3895301 | None:intergenic | 40.0% | |
| GTTAATATCACGGTTTGTGC+AGG | - | chr5.2:3897700-3897719 | MS.gene22595:intron | 40.0% | |
| GTTGCCAACAACATCAATGA+TGG | + | chr5.2:3896376-3896395 | None:intergenic | 40.0% | |
| TACTTCCTACTGAGTCTGAA+AGG | - | chr5.2:3897159-3897178 | MS.gene22595:intron | 40.0% | |
| TATAGTTGTGTGTTACCAGC+TGG | + | chr5.2:3897909-3897928 | None:intergenic | 40.0% | |
| TCAGACTCAGTAGGAAGTAA+TGG | + | chr5.2:3897158-3897177 | None:intergenic | 40.0% | |
| TCATGCTGTTGAAGCTGTTA+TGG | - | chr5.2:3894576-3894595 | MS.gene22595:intron | 40.0% | |
| TCGGGCTCATTCAAAACTTT+GGG | + | chr5.2:3897573-3897592 | None:intergenic | 40.0% | |
| TGACAAAGCAAAACTTGTGG+AGG | - | chr5.2:3897727-3897746 | MS.gene22595:intron | 40.0% | |
| TGCAAAGTGGAGCTTCAATA+GGG | - | chr5.2:3896641-3896660 | MS.gene22595:intron | 40.0% | |
| TGGCTAATCTGAAGAAAGTG+GGG | - | chr5.2:3895118-3895137 | MS.gene22595:intron | 40.0% | |
| TGTGTTACCAGCTGGTAATT+AGG | + | chr5.2:3897901-3897920 | None:intergenic | 40.0% | |
| TGTTAGTCGATGTGGATGAT+GGG | + | chr5.2:3896465-3896484 | None:intergenic | 40.0% | |
| TTACCTTGGTTGAATAGGGA+TGG | - | chr5.2:3895850-3895869 | MS.gene22595:intron | 40.0% | |
| TTGCAAAGTGGAGCTTCAAT+AGG | - | chr5.2:3896640-3896659 | MS.gene22595:intron | 40.0% | |
| TTGTGGGTGGTAATAGTTGT+TGG | + | chr5.2:3895306-3895325 | None:intergenic | 40.0% | |
| TTGTTGGCGGTTTCATATCA+TGG | + | chr5.2:3895290-3895309 | None:intergenic | 40.0% | |
| ! | CATCCACATCGACTAACATT+AGG | - | chr5.2:3896467-3896486 | MS.gene22595:intron | 40.0% |
| ! | CCTTTTACTGTTAGGCTACT+AGG | - | chr5.2:3895681-3895700 | MS.gene22595:intron | 40.0% |
| ! | GCCAACAAAGAGGATTTTGA+TGG | - | chr5.2:3894387-3894406 | MS.gene22595:intron | 40.0% |
| ! | GCTTGTGTCACTAACTAATC+TGG | - | chr5.2:3897678-3897697 | MS.gene22595:intron | 40.0% |
| ! | TATCTCTTGTTTGTGTGCTG+TGG | - | chr5.2:3895579-3895598 | MS.gene22595:intron | 40.0% |
| ! | TCCACATCGACTAACATTAG+GGG | - | chr5.2:3896469-3896488 | MS.gene22595:intron | 40.0% |
| !! | AACTTTAAAGTGGTACGGAG+GGG | + | chr5.2:3894669-3894688 | None:intergenic | 40.0% |
| !! | CTAGCTGGAGTGTGTTTTTA+AGG | - | chr5.2:3895890-3895909 | MS.gene22595:intron | 40.0% |
| !! | GAACTTTAAAGTGGTACGGA+GGG | + | chr5.2:3894670-3894689 | None:intergenic | 40.0% |
| !! | GATGATGGGGTCTCTAAATT+GGG | + | chr5.2:3896451-3896470 | None:intergenic | 40.0% |
| !! | GGTTTGGTGGGTTAGATATT+TGG | - | chr5.2:3895026-3895045 | MS.gene22595:intron | 40.0% |
| !! | TGAACTTTAAAGTGGTACGG+AGG | + | chr5.2:3894671-3894690 | None:intergenic | 40.0% |
| AAGACTGAAGTTGTGTCACC+CGG | + | chr5.2:3897403-3897422 | None:intergenic | 45.0% | |
| AATACCTTACAAGCCCTCAC+AGG | - | chr5.2:3894616-3894635 | MS.gene22595:intron | 45.0% | |
| AGTGACCTTTCAGACTCAGT+AGG | + | chr5.2:3897167-3897186 | None:intergenic | 45.0% | |
| CGGTTTCATATCATGGTTGG+AGG | + | chr5.2:3895283-3895302 | None:intergenic | 45.0% | |
| CTAATCTGAAGAAAGTGGGG+GGG | - | chr5.2:3895121-3895140 | MS.gene22595:intron | 45.0% | |
| CTTGCGTTTCGACTTCAAAG+AGG | + | chr5.2:3897837-3897856 | None:intergenic | 45.0% | |
| GAGAGTGAGTATTACGTACG+AGG | + | chr5.2:3894151-3894170 | None:intergenic | 45.0% | |
| GATAATCAGTCAAGTGGTGG+TGG | - | chr5.2:3897107-3897126 | MS.gene22595:intron | 45.0% | |
| GATTATAGTTCGGTTGTGGG+TGG | + | chr5.2:3895319-3895338 | None:intergenic | 45.0% | |
| GCAGTGTACATATACCTGTG+AGG | + | chr5.2:3894633-3894652 | None:intergenic | 45.0% | |
| GCTAATCTGAAGAAAGTGGG+GGG | - | chr5.2:3895120-3895139 | MS.gene22595:intron | 45.0% | |
| GGCTAATCTGAAGAAAGTGG+GGG | - | chr5.2:3895119-3895138 | MS.gene22595:intron | 45.0% | |
| GGTGGTGATCATGACATGAT+GGG | - | chr5.2:3897125-3897144 | MS.gene22595:intron | 45.0% | |
| GTCGGGCTCATTCAAAACTT+TGG | + | chr5.2:3897574-3897593 | None:intergenic | 45.0% | |
| GTTAGTCGATGTGGATGATG+GGG | + | chr5.2:3896464-3896483 | None:intergenic | 45.0% | |
| TATACCTGTGAGGGCTTGTA+AGG | + | chr5.2:3894623-3894642 | None:intergenic | 45.0% | |
| TCATATCATGGTTGGAGGGA+GGG | + | chr5.2:3895278-3895297 | None:intergenic | 45.0% | |
| TGAGAACAGACAACTGAAGG+CGG | - | chr5.2:3893935-3893954 | MS.gene22595:intron | 45.0% | |
| TGAGTCTGAAAGGTCACTCA+TGG | - | chr5.2:3897169-3897188 | MS.gene22595:intron | 45.0% | |
| TGGCGGTTTCATATCATGGT+TGG | + | chr5.2:3895286-3895305 | None:intergenic | 45.0% | |
| TGGGTGGTAATAGTTGTTGG+CGG | + | chr5.2:3895303-3895322 | None:intergenic | 45.0% | |
| TTCATATCATGGTTGGAGGG+AGG | + | chr5.2:3895279-3895298 | None:intergenic | 45.0% | |
| ! | AGACATTTGGAAGGGTTGGT+TGG | - | chr5.2:3895547-3895566 | MS.gene22595:intron | 45.0% |
| ! | CCACATCGACTAACATTAGG+GGG | - | chr5.2:3896470-3896489 | MS.gene22595:intron | 45.0% |
| ! | GATCATGACATGATGGGACT+TGG | - | chr5.2:3897131-3897150 | MS.gene22595:intron | 45.0% |
| ! | TATCTCTTGGTGCATCTCAC+TGG | + | chr5.2:3897993-3898012 | None:intergenic | 45.0% |
| ! | TCGAGTTGTTGACGATCATG+AGG | + | chr5.2:3894122-3894141 | None:intergenic | 45.0% |
| ! | TGGTGGTGATCATGACATGA+TGG | - | chr5.2:3897124-3897143 | MS.gene22595:intron | 45.0% |
| !! | ACTTTAAAGTGGTACGGAGG+GGG | + | chr5.2:3894668-3894687 | None:intergenic | 45.0% |
| !! | CTTTGAAGTCGAAACGCAAG+AGG | - | chr5.2:3897837-3897856 | MS.gene22595:CDS | 45.0% |
| !! | GACATTTGGAAGGGTTGGTT+GGG | - | chr5.2:3895548-3895567 | MS.gene22595:intron | 45.0% |
| !! | GGATGATGGGGTCTCTAAAT+TGG | + | chr5.2:3896452-3896471 | None:intergenic | 45.0% |
| !! | CATTAATTAATTAATTAATT+AGG | + | chr5.2:3895160-3895179 | None:intergenic | 5.0% |
| !!! | AATTAAACAAATATTTTATT+TGG | + | chr5.2:3894956-3894975 | None:intergenic | 5.0% |
| ACCAAGCTTAGGGATGATGC+AGG | - | chr5.2:3893884-3893903 | MS.gene22595:CDS | 50.0% | |
| AGGAAGTGGTGCGATGATGT+CGG | - | chr5.2:3897046-3897065 | MS.gene22595:intron | 50.0% | |
| AGTGGAGCTTCAATAGGGAC+TGG | - | chr5.2:3896646-3896665 | MS.gene22595:intron | 50.0% | |
| CAGGAGACATTTGGAAGGGT+TGG | - | chr5.2:3895543-3895562 | MS.gene22595:intron | 50.0% | |
| CCAAGCTTAGGGATGATGCA+GGG | - | chr5.2:3893885-3893904 | MS.gene22595:CDS | 50.0% | |
| CCCCCTAATGTTAGTCGATG+TGG | + | chr5.2:3896473-3896492 | None:intergenic | 50.0% | |
| CGGTGAGAACAGACAACTGA+AGG | - | chr5.2:3893932-3893951 | MS.gene22595:intron | 50.0% | |
| GCAAAACTTGTGGAGGAGAC+AGG | - | chr5.2:3897734-3897753 | MS.gene22595:intron | 50.0% | |
| GCACCATCCCTATTCAACCA+AGG | + | chr5.2:3895856-3895875 | None:intergenic | 50.0% | |
| GTGAGTTTGGGAGAAGGAAG+TGG | - | chr5.2:3897032-3897051 | MS.gene22595:intron | 50.0% | |
| TCAGGAGTGAGTTTGGGAGA+AGG | - | chr5.2:3897026-3897045 | MS.gene22595:intron | 50.0% | |
| ! | ATGATGCAGGGTGGTGGTTA+CGG | - | chr5.2:3893897-3893916 | MS.gene22595:CDS | 50.0% |
| ! | TCTTGGTGCATCTCACTGGT+GGG | + | chr5.2:3897989-3898008 | None:intergenic | 50.0% |
| !! | TGTTGGTGGTTGTTTGGTGC+AGG | - | chr5.2:3894495-3894514 | MS.gene22595:CDS | 50.0% |
| !!! | CAGCCGTGTTTTAACCTAGC+TGG | - | chr5.2:3895875-3895894 | MS.gene22595:intron | 50.0% |
| AGCTTAGGGATGATGCAGGG+TGG | - | chr5.2:3893888-3893907 | MS.gene22595:CDS | 55.0% | |
| CCCTGCATCATCCCTAAGCT+TGG | + | chr5.2:3893888-3893907 | None:intergenic | 55.0% | |
| GGTACGGAGGGGGAGATATA+TGG | + | chr5.2:3894658-3894677 | None:intergenic | 55.0% | |
| GGTGGCAGCAACATGCAAAG+TGG | - | chr5.2:3897431-3897450 | MS.gene22595:intron | 55.0% | |
| TTAGGGATGATGCAGGGTGG+TGG | - | chr5.2:3893891-3893910 | MS.gene22595:CDS | 55.0% | |
| ! | CTCTTGGTGCATCTCACTGG+TGG | + | chr5.2:3897990-3898009 | None:intergenic | 55.0% |
| CTGAAGAAAGTGGGGGGGTG+TGG | - | chr5.2:3895126-3895145 | MS.gene22595:intron | 60.0% | |
| GGTGGTTACGGTGGAGATGG+TGG | - | chr5.2:3893909-3893928 | MS.gene22595:intron | 60.0% | |
| ! | AGAAAGTGGGGGGGTGTGGT+AGG | - | chr5.2:3895130-3895149 | MS.gene22595:intron | 60.0% |
| ! | ATGCAGGGTGGTGGTTACGG+TGG | - | chr5.2:3893900-3893919 | MS.gene22595:intron | 60.0% |
| ! | GAAAGTGGGGGGGTGTGGTA+GGG | - | chr5.2:3895131-3895150 | MS.gene22595:intron | 60.0% |
| ! | GGTGGTGGTTACGGTGGAGA+TGG | - | chr5.2:3893906-3893925 | MS.gene22595:intron | 60.0% |
| ! | GGTTACGGTGGAGATGGTGG+CGG | - | chr5.2:3893912-3893931 | MS.gene22595:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 3893876 | 3898015 | 3893876 | ID=MS.gene22595 |
| chr5.2 | mRNA | 3893876 | 3898015 | 3893876 | ID=MS.gene22595.t1;Parent=MS.gene22595 |
| chr5.2 | exon | 3897740 | 3898015 | 3897740 | ID=MS.gene22595.t1.exon1;Parent=MS.gene22595.t1 |
| chr5.2 | CDS | 3897740 | 3898015 | 3897740 | ID=cds.MS.gene22595.t1;Parent=MS.gene22595.t1 |
| chr5.2 | exon | 3897254 | 3897374 | 3897254 | ID=MS.gene22595.t1.exon2;Parent=MS.gene22595.t1 |
| chr5.2 | CDS | 3897254 | 3897374 | 3897254 | ID=cds.MS.gene22595.t1;Parent=MS.gene22595.t1 |
| chr5.2 | exon | 3894662 | 3894861 | 3894662 | ID=MS.gene22595.t1.exon3;Parent=MS.gene22595.t1 |
| chr5.2 | CDS | 3894662 | 3894861 | 3894662 | ID=cds.MS.gene22595.t1;Parent=MS.gene22595.t1 |
| chr5.2 | exon | 3894426 | 3894557 | 3894426 | ID=MS.gene22595.t1.exon4;Parent=MS.gene22595.t1 |
| chr5.2 | CDS | 3894426 | 3894557 | 3894426 | ID=cds.MS.gene22595.t1;Parent=MS.gene22595.t1 |
| chr5.2 | exon | 3894033 | 3894169 | 3894033 | ID=MS.gene22595.t1.exon5;Parent=MS.gene22595.t1 |
| chr5.2 | CDS | 3894033 | 3894169 | 3894033 | ID=cds.MS.gene22595.t1;Parent=MS.gene22595.t1 |
| chr5.2 | exon | 3893876 | 3893918 | 3893876 | ID=MS.gene22595.t1.exon6;Parent=MS.gene22595.t1 |
| chr5.2 | CDS | 3893876 | 3893918 | 3893876 | ID=cds.MS.gene22595.t1;Parent=MS.gene22595.t1 |
| Gene Sequence |
| Protein sequence |
