Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22758.t1 | XP_013450620.1 | 93.3 | 356 | 9 | 4 | 110 | 464 | 116 | 457 | 9.70E-103 | 384 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22758.t1 | Q7F9W2 | 86.1 | 108 | 15 | 0 | 110 | 217 | 108 | 215 | 1.4e-49 | 198.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22758.t1 | A0A072U667 | 93.3 | 356 | 9 | 4 | 110 | 464 | 116 | 457 | 7.0e-103 | 384.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene22758.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22758.t1 | MTR_7g117455 | 79.461 | 482 | 56 | 12 | 1 | 464 | 1 | 457 | 0.0 | 604 |
MS.gene22758.t1 | MTR_8g023990 | 41.649 | 473 | 162 | 18 | 32 | 456 | 102 | 508 | 5.41e-88 | 278 |
MS.gene22758.t1 | MTR_1g058350 | 64.179 | 134 | 41 | 3 | 89 | 217 | 50 | 181 | 1.01e-48 | 170 |
MS.gene22758.t1 | MTR_7g105370 | 74.257 | 101 | 23 | 2 | 116 | 216 | 65 | 162 | 2.37e-45 | 160 |
MS.gene22758.t1 | MTR_5g053920 | 65.812 | 117 | 30 | 2 | 108 | 216 | 191 | 305 | 6.23e-45 | 161 |
MS.gene22758.t1 | MTR_1g093600 | 52.632 | 152 | 53 | 3 | 108 | 242 | 188 | 337 | 1.32e-42 | 155 |
MS.gene22758.t1 | MTR_1g116920 | 47.107 | 121 | 52 | 2 | 79 | 199 | 138 | 246 | 1.44e-28 | 114 |
MS.gene22758.t1 | MTR_2g014770 | 39.091 | 110 | 66 | 1 | 92 | 200 | 138 | 247 | 7.98e-15 | 77.4 |
MS.gene22758.t1 | MTR_2g014770 | 39.091 | 110 | 66 | 1 | 92 | 200 | 138 | 247 | 1.11e-14 | 76.6 |
MS.gene22758.t1 | MTR_4g028130 | 40.659 | 91 | 49 | 3 | 111 | 199 | 314 | 401 | 4.39e-14 | 75.1 |
MS.gene22758.t1 | MTR_4g028130 | 40.659 | 91 | 49 | 3 | 111 | 199 | 314 | 401 | 4.75e-14 | 75.1 |
MS.gene22758.t1 | MTR_5g075410 | 38.462 | 91 | 51 | 3 | 111 | 199 | 321 | 408 | 7.10e-14 | 74.3 |
MS.gene22758.t1 | MTR_4g028130 | 39.560 | 91 | 50 | 3 | 111 | 199 | 314 | 401 | 8.22e-14 | 74.3 |
MS.gene22758.t1 | MTR_3g467380 | 40.659 | 91 | 49 | 3 | 111 | 199 | 338 | 425 | 1.98e-13 | 73.2 |
MS.gene22758.t1 | MTR_2g011940 | 38.679 | 106 | 57 | 4 | 111 | 214 | 343 | 442 | 2.07e-13 | 73.2 |
MS.gene22758.t1 | MTR_2g011940 | 38.679 | 106 | 57 | 4 | 111 | 214 | 352 | 451 | 3.39e-13 | 72.4 |
MS.gene22758.t1 | MTR_7g073240 | 40.659 | 91 | 49 | 3 | 111 | 199 | 121 | 208 | 3.51e-13 | 71.2 |
MS.gene22758.t1 | MTR_2g011940 | 38.679 | 106 | 57 | 4 | 111 | 214 | 352 | 451 | 3.97e-13 | 72.0 |
MS.gene22758.t1 | MTR_4g088210 | 39.000 | 100 | 60 | 1 | 102 | 200 | 138 | 237 | 1.23e-12 | 70.5 |
MS.gene22758.t1 | MTR_4g088210 | 39.000 | 100 | 60 | 1 | 102 | 200 | 138 | 237 | 1.41e-12 | 70.5 |
MS.gene22758.t1 | MTR_8g106540 | 71.429 | 42 | 10 | 1 | 382 | 423 | 118 | 157 | 2.33e-11 | 65.1 |
MS.gene22758.t1 | MTR_4g060460 | 36.111 | 108 | 68 | 1 | 110 | 216 | 164 | 271 | 4.75e-11 | 65.5 |
MS.gene22758.t1 | MTR_4g060460 | 36.111 | 108 | 68 | 1 | 110 | 216 | 164 | 271 | 5.26e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22758.t1 | AT2G46870 | 42.775 | 346 | 78 | 11 | 88 | 412 | 6 | 252 | 8.54e-70 | 224 |
MS.gene22758.t1 | AT1G01030 | 76.562 | 128 | 29 | 1 | 107 | 233 | 51 | 178 | 2.95e-63 | 208 |
MS.gene22758.t1 | AT1G01030 | 80.165 | 121 | 23 | 1 | 107 | 226 | 51 | 171 | 1.74e-61 | 204 |
MS.gene22758.t1 | AT3G61970 | 64.516 | 155 | 49 | 3 | 93 | 243 | 4 | 156 | 2.82e-59 | 197 |
MS.gene22758.t1 | AT4G01500 | 41.304 | 322 | 94 | 12 | 108 | 413 | 32 | 274 | 6.23e-58 | 194 |
MS.gene22758.t1 | AT3G11580 | 63.492 | 126 | 33 | 2 | 103 | 217 | 20 | 143 | 6.30e-50 | 170 |
MS.gene22758.t1 | AT3G11580 | 63.492 | 126 | 33 | 2 | 103 | 217 | 20 | 143 | 6.30e-50 | 170 |
MS.gene22758.t1 | AT3G11580 | 63.492 | 126 | 33 | 2 | 103 | 217 | 20 | 143 | 6.30e-50 | 170 |
MS.gene22758.t1 | AT3G11580 | 63.492 | 126 | 33 | 2 | 103 | 217 | 20 | 143 | 1.60e-49 | 170 |
MS.gene22758.t1 | AT3G11580 | 64.000 | 125 | 32 | 2 | 103 | 216 | 20 | 142 | 2.52e-48 | 170 |
MS.gene22758.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 104 | 217 | 30 | 144 | 2.71e-47 | 161 |
MS.gene22758.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 104 | 217 | 30 | 144 | 2.71e-47 | 161 |
MS.gene22758.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 104 | 217 | 30 | 144 | 3.43e-47 | 163 |
MS.gene22758.t1 | AT2G36080 | 69.231 | 117 | 31 | 2 | 104 | 217 | 30 | 144 | 4.03e-47 | 163 |
MS.gene22758.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 108 | 216 | 42 | 158 | 6.79e-47 | 163 |
MS.gene22758.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 108 | 216 | 42 | 158 | 1.07e-46 | 163 |
MS.gene22758.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 108 | 216 | 42 | 158 | 1.11e-46 | 163 |
MS.gene22758.t1 | AT1G13260 | 70.536 | 112 | 30 | 2 | 109 | 219 | 185 | 294 | 2.00e-46 | 164 |
MS.gene22758.t1 | AT5G06250 | 65.000 | 120 | 30 | 2 | 108 | 217 | 42 | 159 | 2.07e-46 | 162 |
MS.gene22758.t1 | AT5G06250 | 65.546 | 119 | 29 | 2 | 108 | 216 | 42 | 158 | 2.15e-46 | 162 |
MS.gene22758.t1 | AT1G68840 | 68.966 | 116 | 32 | 3 | 104 | 217 | 180 | 293 | 2.35e-46 | 164 |
MS.gene22758.t1 | AT1G68840 | 68.966 | 116 | 32 | 3 | 104 | 217 | 180 | 293 | 2.35e-46 | 164 |
MS.gene22758.t1 | AT3G25730 | 59.524 | 126 | 42 | 3 | 99 | 217 | 166 | 289 | 9.58e-44 | 157 |
MS.gene22758.t1 | AT1G25560 | 62.295 | 122 | 36 | 2 | 104 | 217 | 187 | 306 | 9.79e-44 | 157 |
MS.gene22758.t1 | AT1G50680 | 50.000 | 100 | 39 | 2 | 110 | 198 | 155 | 254 | 1.53e-25 | 107 |
MS.gene22758.t1 | AT1G51120 | 49.485 | 97 | 41 | 1 | 110 | 198 | 176 | 272 | 4.40e-24 | 103 |
MS.gene22758.t1 | AT4G32010 | 41.053 | 95 | 51 | 3 | 111 | 203 | 285 | 376 | 2.71e-14 | 75.9 |
MS.gene22758.t1 | AT4G32010 | 41.053 | 95 | 51 | 3 | 111 | 203 | 281 | 372 | 2.78e-14 | 75.9 |
MS.gene22758.t1 | AT2G30470 | 39.560 | 91 | 50 | 3 | 111 | 199 | 294 | 381 | 9.29e-14 | 74.3 |
MS.gene22758.t1 | AT2G33860 | 41.304 | 92 | 53 | 1 | 110 | 200 | 157 | 248 | 5.77e-12 | 68.2 |
MS.gene22758.t1 | AT1G35240 | 37.864 | 103 | 58 | 2 | 112 | 208 | 126 | 228 | 1.29e-11 | 67.4 |
MS.gene22758.t1 | AT2G33860 | 40.659 | 91 | 53 | 1 | 111 | 200 | 1 | 91 | 4.89e-11 | 65.1 |
MS.gene22758.t1 | AT1G35520 | 36.893 | 103 | 59 | 2 | 112 | 208 | 126 | 228 | 6.46e-11 | 65.1 |
Find 141 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTCGATCTTCAAAATTT+AGG | 0.195221 | 7.3:+267148 | None:intergenic |
TTCAGTGGTGCCGGCGATAT+TGG | 0.224155 | 7.3:+266224 | None:intergenic |
GGAAAACGACTGAGACTATT+TGG | 0.226531 | 7.3:-266409 | MS.gene22758:CDS |
CCCTCTTCTACAACAACTTC+TGG | 0.253546 | 7.3:-266310 | MS.gene22758:CDS |
GTAGAAGGGGCAGCGTAATT+AGG | 0.294314 | 7.3:+266775 | None:intergenic |
AACTTCGCTGCACTTTGATT+TGG | 0.298974 | 7.3:-266260 | MS.gene22758:CDS |
TACTTCTCTGCGTGCTGCTT+TGG | 0.305864 | 7.3:+267210 | None:intergenic |
AAAGGCAGTGGAGGAGGAGG+AGG | 0.323749 | 7.3:+266889 | None:intergenic |
GAATCAATTATCATATTCAT+AGG | 0.331308 | 7.3:+266478 | None:intergenic |
GGCAGTGGAGGAGGAGGAGG+AGG | 0.344007 | 7.3:+266892 | None:intergenic |
GTGGTTGATGGTGGCGTAAT+TGG | 0.354445 | 7.3:+266583 | None:intergenic |
TGAAGAGGAGGTAGATTTGA+TGG | 0.354882 | 7.3:-267430 | MS.gene22758:CDS |
ATGGTAAGATGTGGAGGTTC+AGG | 0.360401 | 7.3:-267128 | MS.gene22758:CDS |
TCAGTGGTGCCGGCGATATT+GGG | 0.365725 | 7.3:+266225 | None:intergenic |
CGCAGAGAAGTACTTCCCTT+TGG | 0.372478 | 7.3:-267199 | MS.gene22758:CDS |
GAAAACGACTGAGACTATTT+GGG | 0.373722 | 7.3:-266408 | MS.gene22758:CDS |
GGAGGTTCAGGTATTCATAT+TGG | 0.376730 | 7.3:-267116 | MS.gene22758:CDS |
TGAGGATGAGATATTGTAGA+AGG | 0.383802 | 7.3:+266760 | None:intergenic |
AGAGCATATGTTTGATAAAG+TGG | 0.387272 | 7.3:-267274 | MS.gene22758:CDS |
AAAGGATGAGGAGGAGGAGG+AGG | 0.387884 | 7.3:-267328 | MS.gene22758:CDS |
CAGAGTTATGTGATGACAAA+AGG | 0.396646 | 7.3:-267084 | MS.gene22758:CDS |
TAGAAAGGCAGTGGAGGAGG+AGG | 0.402946 | 7.3:+266886 | None:intergenic |
AGATAGAAAGGCAGTGGAGG+AGG | 0.405784 | 7.3:+266883 | None:intergenic |
CCACCAGCTGTGGTGGTTGA+TGG | 0.413549 | 7.3:+266571 | None:intergenic |
AAGGGCAATGACGAAGGATT+AGG | 0.420096 | 7.3:-267375 | MS.gene22758:CDS |
GGGGCAGCGTAATTAGGATT+AGG | 0.420563 | 7.3:+266781 | None:intergenic |
AATCATCACTATTCATCATA+TGG | 0.429981 | 7.3:-266853 | MS.gene22758:CDS |
GACGAAGGATTAGGAGGAAT+AGG | 0.436627 | 7.3:-267366 | MS.gene22758:CDS |
TTGATGGAGTTAAGACTTGG+AGG | 0.438088 | 7.3:-267414 | MS.gene22758:CDS |
GAGGGTGGAAGTTGACGATT+AGG | 0.443967 | 7.3:+266328 | None:intergenic |
CCTCTTCTACAACAACTTCT+GGG | 0.444861 | 7.3:-266309 | MS.gene22758:CDS |
GACACAGATTGTACATAGAT+TGG | 0.447780 | 7.3:-266981 | MS.gene22758:CDS |
TAGGAAGGTGAGAATATTGA+GGG | 0.450373 | 7.3:+266800 | None:intergenic |
GATATTGAGGGATGAGGTGG+TGG | 0.450649 | 7.3:+266914 | None:intergenic |
GGAAGATAGAAAGGCAGTGG+AGG | 0.452590 | 7.3:+266880 | None:intergenic |
GCGAGGAGGTGAGATAATAG+AGG | 0.457021 | 7.3:+266605 | None:intergenic |
GGAGGAAGATAGAAAGGCAG+TGG | 0.458358 | 7.3:+266877 | None:intergenic |
CCGCGGTGATGATGTGCAAC+TGG | 0.459480 | 7.3:+266451 | None:intergenic |
ATCATGATCAACATCACATA+GGG | 0.468716 | 7.3:-266285 | MS.gene22758:CDS |
AGGTGATCAGCAGCAGGAGC+AGG | 0.469663 | 7.3:+266664 | None:intergenic |
GATTCTTCTACCAACGAGAA+AGG | 0.473959 | 7.3:-267177 | MS.gene22758:CDS |
TTAGGAAGGTGAGAATATTG+AGG | 0.476881 | 7.3:+266799 | None:intergenic |
GAGTTAAGACTTGGAGGAGG+GGG | 0.479014 | 7.3:-267408 | MS.gene22758:CDS |
TGGAGTTAAGACTTGGAGGA+GGG | 0.479526 | 7.3:-267410 | MS.gene22758:CDS |
AAGGGTATTGTTCTGATAGC+AGG | 0.479960 | 7.3:-268139 | MS.gene22758:CDS |
CGGCGATATTGGGAATTAGA+AGG | 0.483289 | 7.3:+266235 | None:intergenic |
CGAGGAGGTGAGATAATAGA+GGG | 0.488870 | 7.3:+266606 | None:intergenic |
GATTTGATGGAGTTAAGACT+TGG | 0.489573 | 7.3:-267417 | MS.gene22758:CDS |
GATGATATCATCGCAATCAC+TGG | 0.492831 | 7.3:-268095 | MS.gene22758:CDS |
TATGATGAATAGTGATGATT+GGG | 0.494045 | 7.3:+266856 | None:intergenic |
TTCAAAGGATGAGGAGGAGG+AGG | 0.506022 | 7.3:-267331 | MS.gene22758:CDS |
GAGGATGAGATATTGTAGAA+GGG | 0.507152 | 7.3:+266761 | None:intergenic |
CCACCATCAACCACCACAGC+TGG | 0.507318 | 7.3:-266574 | MS.gene22758:CDS |
ATTCTTCTACCAACGAGAAA+GGG | 0.509922 | 7.3:-267176 | MS.gene22758:CDS |
ATATGATGAATAGTGATGAT+TGG | 0.513248 | 7.3:+266855 | None:intergenic |
TTCTTCAAATTCAAAGGATG+AGG | 0.513842 | 7.3:-267340 | MS.gene22758:CDS |
GTTTCTTCTCCTTAACGAAA+CGG | 0.517535 | 7.3:+267055 | None:intergenic |
TTCTTCTTCAGCACCACCAC+AGG | 0.518188 | 7.3:-266359 | MS.gene22758:CDS |
AGGATGTTCTTCAAATTCAA+AGG | 0.518491 | 7.3:-267346 | MS.gene22758:CDS |
AGGGTGGAGCCGTTTCGTTA+AGG | 0.519476 | 7.3:-267064 | MS.gene22758:CDS |
TTTCAGGGATCCGTGGTGCA+AGG | 0.522724 | 7.3:-266532 | MS.gene22758:CDS |
TGATTGGGAGGAAGATAGAA+AGG | 0.523415 | 7.3:+266871 | None:intergenic |
GAGGAGGAGGAGGATATTGA+GGG | 0.524733 | 7.3:+266902 | None:intergenic |
ATTTGATGGAACAAGTGAAA+GGG | 0.525706 | 7.3:-268157 | None:intergenic |
AGGATGAGATATTGTAGAAG+GGG | 0.527536 | 7.3:+266762 | None:intergenic |
AAATTGTTGTTGTAATATTG+AGG | 0.530975 | 7.3:+266742 | None:intergenic |
GAGACTATTTGGGGTTAACA+TGG | 0.535206 | 7.3:-266398 | MS.gene22758:CDS |
GATATGATCTTCAGTGGTGC+CGG | 0.535398 | 7.3:+266215 | None:intergenic |
ATGGAGTTAAGACTTGGAGG+AGG | 0.540445 | 7.3:-267411 | MS.gene22758:CDS |
GGAGTTAAGACTTGGAGGAG+GGG | 0.544084 | 7.3:-267409 | MS.gene22758:CDS |
TTCAGGGATCCGTGGTGCAA+GGG | 0.545428 | 7.3:-266531 | MS.gene22758:CDS |
CGTTGGTAGAAGAATCCAAA+GGG | 0.545569 | 7.3:+267184 | None:intergenic |
AGGGTTACAGACGTCACAGC+TGG | 0.549480 | 7.3:-267493 | MS.gene22758:CDS |
GAGGATATTGAGGGATGAGG+TGG | 0.549967 | 7.3:+266911 | None:intergenic |
TTCAAATTCAAAGGATGAGG+AGG | 0.550070 | 7.3:-267337 | MS.gene22758:CDS |
TGTACATAGATTGGAGGCCA+AGG | 0.550302 | 7.3:-266972 | MS.gene22758:CDS |
CCCAGAAGTTGTTGTAGAAG+AGG | 0.550466 | 7.3:+266309 | None:intergenic |
AAATTCAAAGGATGAGGAGG+AGG | 0.551226 | 7.3:-267334 | MS.gene22758:CDS |
AATTTGATGGAACAAGTGAA+AGG | 0.556860 | 7.3:-268158 | None:intergenic |
TTCAGCTTCCCTACGTCACT+AGG | 0.557671 | 7.3:+267246 | None:intergenic |
CACTATTCATCATATGGTGG+TGG | 0.562154 | 7.3:-266847 | MS.gene22758:CDS |
AGAGTTATGTGATGACAAAA+GGG | 0.563519 | 7.3:-267083 | MS.gene22758:CDS |
GAGGAGGATATTGAGGGATG+AGG | 0.567145 | 7.3:+266908 | None:intergenic |
GGCAATGACGAAGGATTAGG+AGG | 0.574623 | 7.3:-267372 | MS.gene22758:CDS |
TTAACAAGGTGATCAGCAGC+AGG | 0.575298 | 7.3:+266658 | None:intergenic |
TGTGCAATTCAGCACGTCCA+CGG | 0.575558 | 7.3:+267004 | None:intergenic |
ATCATCGCAATCACTGGAGG+AGG | 0.576968 | 7.3:-268089 | MS.gene22758:CDS |
CCAGAAGTTGTTGTAGAAGA+GGG | 0.577780 | 7.3:+266310 | None:intergenic |
AATCAATTATCATATTCATA+GGG | 0.579857 | 7.3:+266479 | None:intergenic |
TGATAGCAGGGACGAAGAGG+AGG | 0.581064 | 7.3:-268126 | MS.gene22758:CDS |
GAGTACTGAGAGTGTGCCCT+TGG | 0.581237 | 7.3:+266955 | None:intergenic |
CTTCTAATTCCCAATATCGC+CGG | 0.581436 | 7.3:-266234 | MS.gene22758:CDS |
TTAGGCATTGCCGCCTGTGG+TGG | 0.586107 | 7.3:+266346 | None:intergenic |
GATCATGATCAACATCACAT+AGG | 0.586128 | 7.3:-266286 | MS.gene22758:CDS |
ATCGAAATGGTAAGATGTGG+AGG | 0.587159 | 7.3:-267134 | MS.gene22758:CDS |
TTCTGATAGCAGGGACGAAG+AGG | 0.587446 | 7.3:-268129 | MS.gene22758:CDS |
CACACCACCACCAGCTGTGG+TGG | 0.589837 | 7.3:+266564 | None:intergenic |
TGGGAAGTTGAATGAAGAGG+AGG | 0.590300 | 7.3:-267442 | MS.gene22758:CDS |
CACCACAGCTGGTGGTGGTG+TGG | 0.591127 | 7.3:-266563 | MS.gene22758:CDS |
GGTGATCAGCAGCAGGAGCA+GGG | 0.594253 | 7.3:+266665 | None:intergenic |
AAGGAGAAGAAACTTGATGC+TGG | 0.595535 | 7.3:-267045 | MS.gene22758:CDS |
AAGATCGAAATGGTAAGATG+TGG | 0.599172 | 7.3:-267137 | MS.gene22758:CDS |
AGGGTATTGTTCTGATAGCA+GGG | 0.599445 | 7.3:-268138 | MS.gene22758:CDS |
ATCCACACCACCACCAGCTG+TGG | 0.603339 | 7.3:+266561 | None:intergenic |
ACAGATTGTACATAGATTGG+AGG | 0.603584 | 7.3:-266978 | MS.gene22758:CDS |
TAGTATTAACATTGCCTCCG+CGG | 0.604612 | 7.3:+266434 | None:intergenic |
TAGGAGAAGCCCTTTCTCGT+TGG | 0.605407 | 7.3:+267167 | None:intergenic |
CGATTAGGCATTGCCGCCTG+TGG | 0.607948 | 7.3:+266343 | None:intergenic |
AGGAAGGTGAGAATATTGAG+GGG | 0.607953 | 7.3:+266801 | None:intergenic |
CCATCAACCACCACAGCTGG+TGG | 0.608577 | 7.3:-266571 | MS.gene22758:CDS |
AGCAGGGACGAAGAGGAGGA+AGG | 0.609762 | 7.3:-268122 | MS.gene22758:CDS |
AAGGTGAGAATATTGAGGGG+AGG | 0.614133 | 7.3:+266804 | None:intergenic |
CCAGCTGTGGTGGTTGATGG+TGG | 0.616460 | 7.3:+266574 | None:intergenic |
CTCTTCTACAACAACTTCTG+GGG | 0.618726 | 7.3:-266308 | MS.gene22758:CDS |
TGGTGACACCTAGTGACGTA+GGG | 0.621412 | 7.3:-267254 | MS.gene22758:CDS |
AAGAGCAAGGGCAATGACGA+AGG | 0.626355 | 7.3:-267381 | MS.gene22758:CDS |
CATCACTATTCATCATATGG+TGG | 0.627152 | 7.3:-266850 | MS.gene22758:CDS |
GAAGTTGTTGTAGAAGAGGG+TGG | 0.628343 | 7.3:+266313 | None:intergenic |
CAGCGTAATTAGGATTAGGA+AGG | 0.629941 | 7.3:+266785 | None:intergenic |
TCAACCACCACAGCTGGTGG+TGG | 0.631467 | 7.3:-266568 | MS.gene22758:CDS |
TTCTTCAGCACCACCACAGG+CGG | 0.633356 | 7.3:-266356 | MS.gene22758:CDS |
AAAACGACTGAGACTATTTG+GGG | 0.634135 | 7.3:-266407 | MS.gene22758:CDS |
GATGAATAGTGATGATTGGG+AGG | 0.640962 | 7.3:+266859 | None:intergenic |
GAGGAGGTGAGATAATAGAG+GGG | 0.642836 | 7.3:+266607 | None:intergenic |
GGTTGGGAAGTTGAATGAAG+AGG | 0.643292 | 7.3:-267445 | MS.gene22758:CDS |
GTGGTGACACCTAGTGACGT+AGG | 0.643690 | 7.3:-267255 | MS.gene22758:CDS |
TGATGGTGGCGTAATTGGCG+AGG | 0.643835 | 7.3:+266588 | None:intergenic |
GATATCATCGCAATCACTGG+AGG | 0.662602 | 7.3:-268092 | MS.gene22758:CDS |
GTACATAGATTGGAGGCCAA+GGG | 0.664207 | 7.3:-266971 | MS.gene22758:CDS |
GGAGGCAATGTTAATACTAG+CGG | 0.665755 | 7.3:-266430 | MS.gene22758:CDS |
GTTATGTGATGACAAAAGGG+TGG | 0.673333 | 7.3:-267080 | MS.gene22758:CDS |
TTGTTGATGCCCTTGCACCA+CGG | 0.680815 | 7.3:+266522 | None:intergenic |
TCGTTGGTAGAAGAATCCAA+AGG | 0.680986 | 7.3:+267183 | None:intergenic |
CATGATCAACATCACATAGG+GGG | 0.690937 | 7.3:-266283 | MS.gene22758:CDS |
GTTGCACATCATCACCGCGG+AGG | 0.703943 | 7.3:-266448 | MS.gene22758:CDS |
GATCAGCAGCAGGAGCAGGG+TGG | 0.705208 | 7.3:+266668 | None:intergenic |
TCATGATCAACATCACATAG+GGG | 0.705858 | 7.3:-266284 | MS.gene22758:CDS |
TGGTGGCGTAATTGGCGAGG+AGG | 0.722964 | 7.3:+266591 | None:intergenic |
GCAATTCAGCACGTCCACGG+TGG | 0.740263 | 7.3:+267007 | None:intergenic |
CCAGTTGCACATCATCACCG+CGG | 0.781500 | 7.3:-266451 | MS.gene22758:CDS |
GACATTGTATCATTCCACCG+TGG | 0.786574 | 7.3:-267021 | MS.gene22758:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAGAAAAGAAAAAAAA+TGG | + | chr7.3:266352-266371 | None:intergenic | 10.0% |
!! | AAAAAGAAAAGAAAAAAAAT+GGG | + | chr7.3:266351-266370 | None:intergenic | 10.0% |
!! | AAATCCTAATAATAATAATA+AGG | + | chr7.3:266640-266659 | None:intergenic | 10.0% |
!! | AATCCTAATAATAATAATAA+GGG | + | chr7.3:266639-266658 | None:intergenic | 10.0% |
!! | AAATCAATTCAATCTATATT+TGG | - | chr7.3:266805-266824 | MS.gene22758:CDS | 15.0% |
!! | AATCAATTATCATATTCATA+GGG | + | chr7.3:267901-267920 | None:intergenic | 15.0% |
!! | GCTTCAAAAAAAAAAAAAAT+TGG | + | chr7.3:266669-266688 | None:intergenic | 15.0% |
!! | TTAATAAATACATGTATTGA+TGG | - | chr7.3:266730-266749 | MS.gene22758:CDS | 15.0% |
!! | ACGTATAATTAAGAATAAGA+TGG | + | chr7.3:266698-266717 | None:intergenic | 20.0% |
!! | ATTATTAGGAAAATGTTAAC+CGG | - | chr7.3:266457-266476 | MS.gene22758:CDS | 20.0% |
!! | CAACCCTTATTATTATTATT+AGG | - | chr7.3:266633-266652 | MS.gene22758:CDS | 20.0% |
!! | GAATCAATTATCATATTCAT+AGG | + | chr7.3:267902-267921 | None:intergenic | 20.0% |
!!! | AAATTGTTGTTGTAATATTG+AGG | + | chr7.3:267638-267657 | None:intergenic | 20.0% |
! | AATCATCACTATTCATCATA+TGG | - | chr7.3:267524-267543 | MS.gene22758:intron | 25.0% |
! | ATATGATGAATAGTGATGAT+TGG | + | chr7.3:267525-267544 | None:intergenic | 25.0% |
! | CATTGAAAATTGTGTAATCA+AGG | - | chr7.3:266524-266543 | MS.gene22758:CDS | 25.0% |
! | CATTTCGATCTTCAAAATTT+AGG | + | chr7.3:267232-267251 | None:intergenic | 25.0% |
! | TATGATGAATAGTGATGATT+GGG | + | chr7.3:267524-267543 | None:intergenic | 25.0% |
! | TCAATTCAATCTATATTTGG+TGG | - | chr7.3:266808-266827 | MS.gene22758:CDS | 25.0% |
!! | ATGAATTAATTTGATCCACT+TGG | - | chr7.3:266854-266873 | MS.gene22758:CDS | 25.0% |
!!! | CTAAATTTTGAAGATCGAAA+TGG | - | chr7.3:267230-267249 | MS.gene22758:CDS | 25.0% |
AGAGCATATGTTTGATAAAG+TGG | - | chr7.3:267103-267122 | MS.gene22758:CDS | 30.0% | |
AGAGTTATGTGATGACAAAA+GGG | - | chr7.3:267294-267313 | MS.gene22758:CDS | 30.0% | |
AGGATGTTCTTCAAATTCAA+AGG | - | chr7.3:267031-267050 | MS.gene22758:CDS | 30.0% | |
ATAATAAGGGTTGTGTTAAC+CGG | + | chr7.3:266626-266645 | None:intergenic | 30.0% | |
ATCATGATCAACATCACATA+GGG | - | chr7.3:268092-268111 | MS.gene22758:CDS | 30.0% | |
GATAGATAGATAGATATGCA+TGG | + | chr7.3:266389-266408 | None:intergenic | 30.0% | |
TGATCCACTTGGTATAATTA+GGG | - | chr7.3:266865-266884 | MS.gene22758:CDS | 30.0% | |
TTCTTCAAATTCAAAGGATG+AGG | - | chr7.3:267037-267056 | MS.gene22758:CDS | 30.0% | |
TTGATCCACTTGGTATAATT+AGG | - | chr7.3:266864-266883 | MS.gene22758:CDS | 30.0% | |
TTTACATTTGCTTCCTTAAC+CGG | + | chr7.3:266496-266515 | None:intergenic | 30.0% | |
! | CTGGTTAAGGTATCTAAAAA+AGG | + | chr7.3:266590-266609 | None:intergenic | 30.0% |
AAAACGACTGAGACTATTTG+GGG | - | chr7.3:267970-267989 | MS.gene22758:intron | 35.0% | |
AAGAAGAAGAAGAAGATGTG+GGG | - | chr7.3:266910-266929 | MS.gene22758:CDS | 35.0% | |
AAGATCGAAATGGTAAGATG+TGG | - | chr7.3:267240-267259 | MS.gene22758:CDS | 35.0% | |
ACAGATTGTACATAGATTGG+AGG | - | chr7.3:267399-267418 | MS.gene22758:CDS | 35.0% | |
AGAAGAAGAAGAAGAAGATG+TGG | - | chr7.3:266908-266927 | MS.gene22758:CDS | 35.0% | |
AGGATGAGATATTGTAGAAG+GGG | + | chr7.3:267618-267637 | None:intergenic | 35.0% | |
ATTCTTCTACCAACGAGAAA+GGG | - | chr7.3:267201-267220 | MS.gene22758:CDS | 35.0% | |
CAGAGTTATGTGATGACAAA+AGG | - | chr7.3:267293-267312 | MS.gene22758:CDS | 35.0% | |
CATCACTATTCATCATATGG+TGG | - | chr7.3:267527-267546 | MS.gene22758:intron | 35.0% | |
GAAAACGACTGAGACTATTT+GGG | - | chr7.3:267969-267988 | MS.gene22758:intron | 35.0% | |
GAAGAAGAAGAAGAAGATGT+GGG | - | chr7.3:266909-266928 | MS.gene22758:CDS | 35.0% | |
GACACAGATTGTACATAGAT+TGG | - | chr7.3:267396-267415 | MS.gene22758:CDS | 35.0% | |
GAGGATGAGATATTGTAGAA+GGG | + | chr7.3:267619-267638 | None:intergenic | 35.0% | |
GATCATGATCAACATCACAT+AGG | - | chr7.3:268091-268110 | MS.gene22758:CDS | 35.0% | |
GATTTGATGGAGTTAAGACT+TGG | - | chr7.3:266960-266979 | MS.gene22758:CDS | 35.0% | |
GTAACCCTAATTATACCAAG+TGG | + | chr7.3:266872-266891 | None:intergenic | 35.0% | |
GTTTCTTCTCCTTAACGAAA+CGG | + | chr7.3:267325-267344 | None:intergenic | 35.0% | |
TAGGAAGGTGAGAATATTGA+GGG | + | chr7.3:267580-267599 | None:intergenic | 35.0% | |
TCATGATCAACATCACATAG+GGG | - | chr7.3:268093-268112 | MS.gene22758:CDS | 35.0% | |
TGAGGATGAGATATTGTAGA+AGG | + | chr7.3:267620-267639 | None:intergenic | 35.0% | |
TTAGGAAGGTGAGAATATTG+AGG | + | chr7.3:267581-267600 | None:intergenic | 35.0% | |
TTCAAATTCAAAGGATGAGG+AGG | - | chr7.3:267040-267059 | MS.gene22758:CDS | 35.0% | |
! | CTTTTGTCATCACATAACTC+TGG | + | chr7.3:267295-267314 | None:intergenic | 35.0% |
AAATTCAAAGGATGAGGAGG+AGG | - | chr7.3:267043-267062 | MS.gene22758:CDS | 40.0% | |
AACTTCGCTGCACTTTGATT+TGG | - | chr7.3:268117-268136 | MS.gene22758:CDS | 40.0% | |
AAGGAGAAGAAACTTGATGC+TGG | - | chr7.3:267332-267351 | MS.gene22758:CDS | 40.0% | |
ACCAAAATGAATCCATGGTC+GGG | - | chr7.3:266759-266778 | MS.gene22758:CDS | 40.0% | |
AGAAGAAGAAGAAGATGTGG+GGG | - | chr7.3:266911-266930 | MS.gene22758:CDS | 40.0% | |
AGGAAGGTGAGAATATTGAG+GGG | + | chr7.3:267579-267598 | None:intergenic | 40.0% | |
ATCGAAATGGTAAGATGTGG+AGG | - | chr7.3:267243-267262 | MS.gene22758:CDS | 40.0% | |
CACCAAAATGAATCCATGGT+CGG | - | chr7.3:266758-266777 | MS.gene22758:CDS | 40.0% | |
CACTATTCATCATATGGTGG+TGG | - | chr7.3:267530-267549 | MS.gene22758:intron | 40.0% | |
CAGCGTAATTAGGATTAGGA+AGG | + | chr7.3:267595-267614 | None:intergenic | 40.0% | |
CATGATCAACATCACATAGG+GGG | - | chr7.3:268094-268113 | MS.gene22758:CDS | 40.0% | |
CCAGAAGTTGTTGTAGAAGA+GGG | + | chr7.3:268070-268089 | None:intergenic | 40.0% | |
CCTCTTCTACAACAACTTCT+GGG | - | chr7.3:268068-268087 | MS.gene22758:intron | 40.0% | |
CTCTTCTACAACAACTTCTG+GGG | - | chr7.3:268069-268088 | MS.gene22758:CDS | 40.0% | |
CTTCTAATTCCCAATATCGC+CGG | - | chr7.3:268143-268162 | MS.gene22758:CDS | 40.0% | |
GATGAATAGTGATGATTGGG+AGG | + | chr7.3:267521-267540 | None:intergenic | 40.0% | |
GATGATATCATCGCAATCAC+TGG | - | chr7.3:266282-266301 | MS.gene22758:CDS | 40.0% | |
GATTCTTCTACCAACGAGAA+AGG | - | chr7.3:267200-267219 | MS.gene22758:CDS | 40.0% | |
GGAAAACGACTGAGACTATT+TGG | - | chr7.3:267968-267987 | MS.gene22758:intron | 40.0% | |
GGAGGCAATGTTAATACTAG+CGG | - | chr7.3:267947-267966 | MS.gene22758:intron | 40.0% | |
GGAGGTTCAGGTATTCATAT+TGG | - | chr7.3:267261-267280 | MS.gene22758:CDS | 40.0% | |
GTTATGTGATGACAAAAGGG+TGG | - | chr7.3:267297-267316 | MS.gene22758:CDS | 40.0% | |
TAGTATTAACATTGCCTCCG+CGG | + | chr7.3:267946-267965 | None:intergenic | 40.0% | |
TCCACACCAAAATGAATCCA+TGG | - | chr7.3:266754-266773 | MS.gene22758:CDS | 40.0% | |
TGAAGAGGAGGTAGATTTGA+TGG | - | chr7.3:266947-266966 | MS.gene22758:CDS | 40.0% | |
TGATTGGGAGGAAGATAGAA+AGG | + | chr7.3:267509-267528 | None:intergenic | 40.0% | |
TTGATGGAGTTAAGACTTGG+AGG | - | chr7.3:266963-266982 | MS.gene22758:CDS | 40.0% | |
! | CGTTGGTAGAAGAATCCAAA+GGG | + | chr7.3:267196-267215 | None:intergenic | 40.0% |
! | GAGACTATTTGGGGTTAACA+TGG | - | chr7.3:267979-267998 | MS.gene22758:intron | 40.0% |
! | GGTGTGGATCAACATTTTCA+GGG | - | chr7.3:267830-267849 | MS.gene22758:intron | 40.0% |
! | TCGTTGGTAGAAGAATCCAA+AGG | + | chr7.3:267197-267216 | None:intergenic | 40.0% |
! | TGGTGTGGATCAACATTTTC+AGG | - | chr7.3:267829-267848 | MS.gene22758:intron | 40.0% |
!! | AAGGGTATTGTTCTGATAGC+AGG | - | chr7.3:266238-266257 | MS.gene22758:CDS | 40.0% |
!! | ACCATGGATTCATTTTGGTG+TGG | + | chr7.3:266758-266777 | None:intergenic | 40.0% |
!! | AGGGTATTGTTCTGATAGCA+GGG | - | chr7.3:266239-266258 | MS.gene22758:CDS | 40.0% |
AAGAAGAAGATGTGGGGGTT+GGG | - | chr7.3:266916-266935 | MS.gene22758:CDS | 45.0% | |
AAGGGCAATGACGAAGGATT+AGG | - | chr7.3:267002-267021 | MS.gene22758:CDS | 45.0% | |
AAGGTGAGAATATTGAGGGG+AGG | + | chr7.3:267576-267595 | None:intergenic | 45.0% | |
ATGGAGTTAAGACTTGGAGG+AGG | - | chr7.3:266966-266985 | MS.gene22758:CDS | 45.0% | |
ATGGTAAGATGTGGAGGTTC+AGG | - | chr7.3:267249-267268 | MS.gene22758:CDS | 45.0% | |
CCAAAATGAATCCATGGTCG+GGG | - | chr7.3:266760-266779 | MS.gene22758:CDS | 45.0% | |
CCCAGAAGTTGTTGTAGAAG+AGG | + | chr7.3:268071-268090 | None:intergenic | 45.0% | |
CCCTCTTCTACAACAACTTC+TGG | - | chr7.3:268067-268086 | MS.gene22758:intron | 45.0% | |
CGAGGAGGTGAGATAATAGA+GGG | + | chr7.3:267774-267793 | None:intergenic | 45.0% | |
CGGCGATATTGGGAATTAGA+AGG | + | chr7.3:268145-268164 | None:intergenic | 45.0% | |
GAAGTTGTTGTAGAAGAGGG+TGG | + | chr7.3:268067-268086 | None:intergenic | 45.0% | |
GACATTGTATCATTCCACCG+TGG | - | chr7.3:267356-267375 | MS.gene22758:CDS | 45.0% | |
GACGAAGGATTAGGAGGAAT+AGG | - | chr7.3:267011-267030 | MS.gene22758:CDS | 45.0% | |
GAGGAGGTGAGATAATAGAG+GGG | + | chr7.3:267773-267792 | None:intergenic | 45.0% | |
GATATCATCGCAATCACTGG+AGG | - | chr7.3:266285-266304 | MS.gene22758:CDS | 45.0% | |
GGTTGGGAAGTTGAATGAAG+AGG | - | chr7.3:266932-266951 | MS.gene22758:CDS | 45.0% | |
GTACATAGATTGGAGGCCAA+GGG | - | chr7.3:267406-267425 | MS.gene22758:CDS | 45.0% | |
TGGAGTTAAGACTTGGAGGA+GGG | - | chr7.3:266967-266986 | MS.gene22758:CDS | 45.0% | |
TGGGAAGTTGAATGAAGAGG+AGG | - | chr7.3:266935-266954 | MS.gene22758:CDS | 45.0% | |
TGTACATAGATTGGAGGCCA+AGG | - | chr7.3:267405-267424 | MS.gene22758:CDS | 45.0% | |
TTAACAAGGTGATCAGCAGC+AGG | + | chr7.3:267722-267741 | None:intergenic | 45.0% | |
!! | TCAACATTTTCAGGGATCCG+TGG | - | chr7.3:267838-267857 | MS.gene22758:intron | 45.0% |
!! | ATTAAACTATTATTATTATT+AGG | - | chr7.3:266443-266462 | MS.gene22758:CDS | 5.0% |
!! | TATTATTATTATTATTAACA+AGG | + | chr7.3:267736-267755 | None:intergenic | 5.0% |
AAGAGCAAGGGCAATGACGA+AGG | - | chr7.3:266996-267015 | MS.gene22758:CDS | 50.0% | |
AGATACCTTAACCAGTGCCC+CGG | - | chr7.3:266595-266614 | MS.gene22758:CDS | 50.0% | |
AGATAGAAAGGCAGTGGAGG+AGG | + | chr7.3:267497-267516 | None:intergenic | 50.0% | |
ATCATCGCAATCACTGGAGG+AGG | - | chr7.3:266288-266307 | MS.gene22758:CDS | 50.0% | |
ATGAATCCATGGTCGGGGTT+TGG | - | chr7.3:266765-266784 | MS.gene22758:CDS | 50.0% | |
GAAGAAGAAGATGTGGGGGT+TGG | - | chr7.3:266915-266934 | MS.gene22758:CDS | 50.0% | |
GAGGAGGAGGAGGATATTGA+GGG | + | chr7.3:267478-267497 | None:intergenic | 50.0% | |
GAGGAGGATATTGAGGGATG+AGG | + | chr7.3:267472-267491 | None:intergenic | 50.0% | |
GAGGATATTGAGGGATGAGG+TGG | + | chr7.3:267469-267488 | None:intergenic | 50.0% | |
GAGGGTGGAAGTTGACGATT+AGG | + | chr7.3:268052-268071 | None:intergenic | 50.0% | |
GAGTTAAGACTTGGAGGAGG+GGG | - | chr7.3:266969-266988 | MS.gene22758:CDS | 50.0% | |
GATATTGAGGGATGAGGTGG+TGG | + | chr7.3:267466-267485 | None:intergenic | 50.0% | |
GCGAGGAGGTGAGATAATAG+AGG | + | chr7.3:267775-267794 | None:intergenic | 50.0% | |
GGAAGATAGAAAGGCAGTGG+AGG | + | chr7.3:267500-267519 | None:intergenic | 50.0% | |
GGAGGAAGATAGAAAGGCAG+TGG | + | chr7.3:267503-267522 | None:intergenic | 50.0% | |
GGAGTTAAGACTTGGAGGAG+GGG | - | chr7.3:266968-266987 | MS.gene22758:CDS | 50.0% | |
GGCAATGACGAAGGATTAGG+AGG | - | chr7.3:267005-267024 | MS.gene22758:CDS | 50.0% | |
GGGGCAGCGTAATTAGGATT+AGG | + | chr7.3:267599-267618 | None:intergenic | 50.0% | |
GTAGAAGGGGCAGCGTAATT+AGG | + | chr7.3:267605-267624 | None:intergenic | 50.0% | |
TAGGAGAAGCCCTTTCTCGT+TGG | + | chr7.3:267213-267232 | None:intergenic | 50.0% | |
TGAATCCATGGTCGGGGTTT+GGG | - | chr7.3:266766-266785 | MS.gene22758:CDS | 50.0% | |
TGGTGACACCTAGTGACGTA+GGG | - | chr7.3:267123-267142 | MS.gene22758:CDS | 50.0% | |
TGTGCAATTCAGCACGTCCA+CGG | + | chr7.3:267376-267395 | None:intergenic | 50.0% | |
TTCAAAGGATGAGGAGGAGG+AGG | - | chr7.3:267046-267065 | MS.gene22758:CDS | 50.0% | |
TTCAGCTTCCCTACGTCACT+AGG | + | chr7.3:267134-267153 | None:intergenic | 50.0% | |
TTCTGATAGCAGGGACGAAG+AGG | - | chr7.3:266248-266267 | MS.gene22758:CDS | 50.0% | |
TTCTTCTTCAGCACCACCAC+AGG | - | chr7.3:268018-268037 | MS.gene22758:intron | 50.0% | |
TTGTTGATGCCCTTGCACCA+CGG | + | chr7.3:267858-267877 | None:intergenic | 50.0% | |
! | CCCCGACCATGGATTCATTT+TGG | + | chr7.3:266763-266782 | None:intergenic | 50.0% |
!! | CGCAGAGAAGTACTTCCCTT+TGG | - | chr7.3:267178-267197 | MS.gene22758:CDS | 50.0% |
!! | GTGGTTGATGGTGGCGTAAT+TGG | + | chr7.3:267797-267816 | None:intergenic | 50.0% |
!! | TACTTCTCTGCGTGCTGCTT+TGG | + | chr7.3:267170-267189 | None:intergenic | 50.0% |
AAAGGATGAGGAGGAGGAGG+AGG | - | chr7.3:267049-267068 | MS.gene22758:CDS | 55.0% | |
AAATGTTAACCGGTGCCCCC+CGG | - | chr7.3:266467-266486 | MS.gene22758:CDS | 55.0% | |
AAGATCCCAAACCCCGACCA+TGG | + | chr7.3:266774-266793 | None:intergenic | 55.0% | |
AGGGTGGAGCCGTTTCGTTA+AGG | - | chr7.3:267313-267332 | MS.gene22758:CDS | 55.0% | |
AGGGTTACAGACGTCACAGC+TGG | - | chr7.3:266884-266903 | MS.gene22758:CDS | 55.0% | |
ATACCTTAACCAGTGCCCCG+GGG | - | chr7.3:266597-266616 | MS.gene22758:CDS | 55.0% | |
CCAGTTGCACATCATCACCG+CGG | - | chr7.3:267926-267945 | MS.gene22758:intron | 55.0% | |
GATACCTTAACCAGTGCCCC+GGG | - | chr7.3:266596-266615 | MS.gene22758:CDS | 55.0% | |
GGAGGAGGAGGAGGATATTG+AGG | + | chr7.3:267479-267498 | None:intergenic | 55.0% | |
GTGGTGACACCTAGTGACGT+AGG | - | chr7.3:267122-267141 | MS.gene22758:CDS | 55.0% | |
TAGAAAGGCAGTGGAGGAGG+AGG | + | chr7.3:267494-267513 | None:intergenic | 55.0% | |
TGATAGCAGGGACGAAGAGG+AGG | - | chr7.3:266251-266270 | MS.gene22758:CDS | 55.0% | |
TTCAGGGATCCGTGGTGCAA+GGG | - | chr7.3:267846-267865 | MS.gene22758:intron | 55.0% | |
TTCTTCAGCACCACCACAGG+CGG | - | chr7.3:268021-268040 | MS.gene22758:intron | 55.0% | |
TTGCTTCCTTAACCGGTGCC+CGG | + | chr7.3:266489-266508 | None:intergenic | 55.0% | |
TTTCAGGGATCCGTGGTGCA+AGG | - | chr7.3:267845-267864 | MS.gene22758:intron | 55.0% | |
!! | GAGTACTGAGAGTGTGCCCT+TGG | + | chr7.3:267425-267444 | None:intergenic | 55.0% |
!! | TCAGTGGTGCCGGCGATATT+GGG | + | chr7.3:268155-268174 | None:intergenic | 55.0% |
!! | TGATGGTGGCGTAATTGGCG+AGG | + | chr7.3:267792-267811 | None:intergenic | 55.0% |
AAAGGCAGTGGAGGAGGAGG+AGG | + | chr7.3:267491-267510 | None:intergenic | 60.0% | |
AATGTTAACCGGTGCCCCCC+GGG | - | chr7.3:266468-266487 | MS.gene22758:CDS | 60.0% | |
AGCAGGGACGAAGAGGAGGA+AGG | - | chr7.3:266255-266274 | MS.gene22758:CDS | 60.0% | |
AGGAGGGGGAAGCAAGAGCA+AGG | - | chr7.3:266983-267002 | MS.gene22758:CDS | 60.0% | |
AGGTGATCAGCAGCAGGAGC+AGG | + | chr7.3:267716-267735 | None:intergenic | 60.0% | |
ATCCACACCACCACCAGCTG+TGG | + | chr7.3:267819-267838 | None:intergenic | 60.0% | |
CCACCAGCTGTGGTGGTTGA+TGG | + | chr7.3:267809-267828 | None:intergenic | 60.0% | |
CCACCATCAACCACCACAGC+TGG | - | chr7.3:267803-267822 | MS.gene22758:intron | 60.0% | |
CCATCAACCACCACAGCTGG+TGG | - | chr7.3:267806-267825 | MS.gene22758:intron | 60.0% | |
GCAATTCAGCACGTCCACGG+TGG | + | chr7.3:267373-267392 | None:intergenic | 60.0% | |
GGAGGGGGAAGCAAGAGCAA+GGG | - | chr7.3:266984-267003 | MS.gene22758:CDS | 60.0% | |
GGTGATCAGCAGCAGGAGCA+GGG | + | chr7.3:267715-267734 | None:intergenic | 60.0% | |
GTTGCACATCATCACCGCGG+AGG | - | chr7.3:267929-267948 | MS.gene22758:intron | 60.0% | |
GTTGTGTTAACCGGTGCCCC+CGG | + | chr7.3:266617-266636 | None:intergenic | 60.0% | |
TACCTTAACCAGTGCCCCGG+GGG | - | chr7.3:266598-266617 | MS.gene22758:CDS | 60.0% | |
TCAACCACCACAGCTGGTGG+TGG | - | chr7.3:267809-267828 | MS.gene22758:intron | 60.0% | |
TGCTTCCTTAACCGGTGCCC+GGG | + | chr7.3:266488-266507 | None:intergenic | 60.0% | |
TTGTGTTAACCGGTGCCCCC+GGG | + | chr7.3:266616-266635 | None:intergenic | 60.0% | |
! | CCGCGGTGATGATGTGCAAC+TGG | + | chr7.3:267929-267948 | None:intergenic | 60.0% |
! | CGATTAGGCATTGCCGCCTG+TGG | + | chr7.3:268037-268056 | None:intergenic | 60.0% |
! | TGGTGGCGTAATTGGCGAGG+AGG | + | chr7.3:267789-267808 | None:intergenic | 60.0% |
! | TTAGGCATTGCCGCCTGTGG+TGG | + | chr7.3:268034-268053 | None:intergenic | 60.0% |
!! | CCAGCTGTGGTGGTTGATGG+TGG | + | chr7.3:267806-267825 | None:intergenic | 60.0% |
CACACCACCACCAGCTGTGG+TGG | + | chr7.3:267816-267835 | None:intergenic | 65.0% | |
CTTCCTTAACCGGTGCCCGG+GGG | + | chr7.3:266486-266505 | None:intergenic | 65.0% | |
GATCAGCAGCAGGAGCAGGG+TGG | + | chr7.3:267712-267731 | None:intergenic | 65.0% | |
GCTTCCTTAACCGGTGCCCG+GGG | + | chr7.3:266487-266506 | None:intergenic | 65.0% | |
GGATGAGGAGGAGGAGGAGG+AGG | - | chr7.3:267052-267071 | MS.gene22758:CDS | 65.0% | |
TGTGTTAACCGGTGCCCCCG+GGG | + | chr7.3:266615-266634 | None:intergenic | 65.0% | |
TTCCTTAACCGGTGCCCGGG+GGG | + | chr7.3:266485-266504 | None:intergenic | 65.0% | |
!! | CACCACAGCTGGTGGTGGTG+TGG | - | chr7.3:267814-267833 | MS.gene22758:intron | 65.0% |
GGCAGTGGAGGAGGAGGAGG+AGG | + | chr7.3:267488-267507 | None:intergenic | 70.0% | |
!! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr7.3:266603-266622 | None:intergenic | 70.0% |
! | AACCAGTGCCCCGGGGGCAC+CGG | - | chr7.3:266604-266623 | MS.gene22758:CDS | 75.0% |
!! | TGCCCCCCGGGCACCGGTTA+AGG | - | chr7.3:266480-266499 | MS.gene22758:CDS | 75.0% |
! | AACCGGTGCCCCCCGGGCAC+CGG | - | chr7.3:266474-266493 | MS.gene22758:CDS | 80.0% |
! | AACCGGTGCCCCCGGGGCAC+TGG | + | chr7.3:266609-266628 | None:intergenic | 80.0% |
!! | AACCGGTGCCCGGGGGGCAC+CGG | + | chr7.3:266479-266498 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 266225 | 268174 | 266225 | ID=MS.gene22758 |
chr7.3 | mRNA | 266225 | 268174 | 266225 | ID=MS.gene22758.t1;Parent=MS.gene22758 |
chr7.3 | exon | 268069 | 268174 | 268069 | ID=MS.gene22758.t1.exon1;Parent=MS.gene22758.t1 |
chr7.3 | CDS | 268069 | 268174 | 268069 | ID=cds.MS.gene22758.t1;Parent=MS.gene22758.t1 |
chr7.3 | exon | 266225 | 267513 | 266225 | ID=MS.gene22758.t1.exon2;Parent=MS.gene22758.t1 |
chr7.3 | CDS | 266225 | 267513 | 266225 | ID=cds.MS.gene22758.t1;Parent=MS.gene22758.t1 |
Gene Sequence |
Protein sequence |