AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22979

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22979.t1 MTR_0402s0040 72.316 177 48 1 122 298 25 200 3.92e-81 263
MS.gene22979.t1 MTR_0402s0040 41.237 97 24 2 483 579 200 263 3.36e-12 69.3
MS.gene22979.t1 MTR_5g015480 74.797 123 31 0 122 244 55 177 1.17e-56 191
MS.gene22979.t1 MTR_1g086270 73.913 115 18 1 418 532 1 103 1.32e-52 175
MS.gene22979.t1 MTR_2g070590 72.381 105 29 0 122 226 16 120 1.57e-45 157
MS.gene22979.t1 MTR_6g017200 77.320 97 22 0 122 218 57 153 7.09e-45 156
MS.gene22979.t1 MTR_6g051425 33.784 296 170 7 130 404 24 314 4.97e-43 157
MS.gene22979.t1 MTR_1g057920 76.404 89 21 0 124 212 35 123 2.99e-39 140
MS.gene22979.t1 MTR_0558s0020 33.198 247 146 4 137 364 50 296 9.40e-39 144
MS.gene22979.t1 MTR_7g113010 62.400 125 33 1 124 248 458 568 1.10e-38 150
MS.gene22979.t1 MTR_1g070355 34.468 235 146 5 128 358 79 309 7.17e-32 130
MS.gene22979.t1 MTR_8g446020 34.426 183 119 1 183 364 74 256 1.72e-31 123
MS.gene22979.t1 MTR_6g090505 34.123 211 124 3 168 363 20 230 2.62e-31 125
MS.gene22979.t1 MTR_1g083640 29.204 226 141 4 129 335 57 282 3.33e-24 103
MS.gene22979.t1 MTR_7g074790 40.588 170 79 4 125 293 12 160 3.51e-24 101
MS.gene22979.t1 MTR_0137s0040 79.630 54 11 0 122 175 35 88 5.52e-24 97.4
MS.gene22979.t1 MTR_4g035820 31.746 252 152 7 129 368 81 324 6.81e-23 103
MS.gene22979.t1 MTR_1g050985 73.333 60 16 0 193 252 39 98 2.53e-22 92.4
MS.gene22979.t1 MTR_4g102720 34.132 167 74 3 125 291 9 139 3.94e-22 95.5
MS.gene22979.t1 MTR_7g446520 30.992 242 149 4 126 366 91 315 2.38e-21 95.9
MS.gene22979.t1 MTR_1g091013 76.786 56 13 0 136 191 14 69 4.50e-21 87.4
MS.gene22979.t1 MTR_5g039760 34.328 201 100 7 123 319 10 182 6.38e-20 88.2
MS.gene22979.t1 MTR_4g067290 46.078 102 49 3 128 227 61 158 2.50e-18 85.1
MS.gene22979.t1 MTR_4g067290 46.078 102 49 3 128 227 61 158 2.57e-18 84.7
MS.gene22979.t1 MTR_0337s0040 30.405 148 102 1 183 329 75 222 4.24e-18 84.0
MS.gene22979.t1 MTR_4g067290 46.078 102 49 3 128 227 79 176 4.83e-18 84.3
MS.gene22979.t1 MTR_4g067290 46.078 102 49 3 128 227 81 178 4.85e-18 84.7
MS.gene22979.t1 MTR_4g067290 46.078 102 49 3 128 227 81 178 4.91e-18 84.7
MS.gene22979.t1 MTR_4g067290 46.078 102 49 3 128 227 121 218 5.78e-18 85.1
MS.gene22979.t1 MTR_7g446480 33.523 176 114 2 199 372 140 314 1.10e-17 84.7
MS.gene22979.t1 MTR_5g076070 25.664 226 164 3 129 352 59 282 2.50e-17 83.2
MS.gene22979.t1 MTR_7g446510 32.955 176 115 2 199 372 155 329 2.51e-17 84.0
MS.gene22979.t1 MTR_7g061980 43.119 109 58 3 127 234 14 119 9.01e-17 77.0
MS.gene22979.t1 MTR_2g098920 37.069 116 67 3 114 227 71 182 6.41e-16 78.6
MS.gene22979.t1 MTR_6g022070 28.082 146 100 1 418 563 1 141 2.51e-15 77.8
MS.gene22979.t1 MTR_1g008290 33.566 143 89 3 179 320 7 144 2.64e-15 73.9
MS.gene22979.t1 MTR_0291s0060 65.385 52 18 0 122 173 34 85 6.40e-15 70.9
MS.gene22979.t1 MTR_3g006370 40.566 106 59 3 127 229 54 158 5.42e-14 72.0
MS.gene22979.t1 MTR_2g014100 25.871 201 127 4 129 307 50 250 7.44e-14 72.0
MS.gene22979.t1 MTR_2g099430 41.379 87 49 1 148 234 28 112 8.66e-14 68.6
MS.gene22979.t1 MTR_3g450850 23.887 247 174 6 129 363 53 297 3.86e-12 68.6
MS.gene22979.t1 MTR_6g022080 26.316 152 109 2 129 278 91 241 1.28e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22979.t1 AT4G38180 36.703 455 281 5 127 577 77 528 6.57e-100 321
MS.gene22979.t1 AT4G15090 32.143 448 298 5 127 571 55 499 1.86e-72 248
MS.gene22979.t1 AT4G15090 32.143 448 298 5 127 571 55 499 1.86e-72 248
MS.gene22979.t1 AT4G15090 32.143 448 298 5 127 571 55 499 1.86e-72 248
MS.gene22979.t1 AT4G15090 32.143 448 298 5 127 571 55 499 1.86e-72 248
MS.gene22979.t1 AT4G15090 32.143 448 298 5 127 571 55 499 1.86e-72 248
MS.gene22979.t1 AT1G76320 30.820 451 291 8 127 571 1 436 5.71e-63 219
MS.gene22979.t1 AT3G22170 30.670 463 275 9 127 571 74 508 9.42e-63 222
MS.gene22979.t1 AT3G22170 30.670 463 275 9 127 571 74 508 9.42e-63 222
MS.gene22979.t1 AT1G76320 30.820 451 291 8 127 571 1 436 3.06e-62 219
MS.gene22979.t1 AT1G76320 30.820 451 291 8 127 571 1 436 3.06e-62 219
MS.gene22979.t1 AT1G76320 30.820 451 291 8 127 571 1 436 3.06e-62 219
MS.gene22979.t1 AT3G06250 29.556 450 268 9 127 574 194 596 6.51e-54 196
MS.gene22979.t1 AT3G06250 29.556 450 268 9 127 574 194 596 6.51e-54 196
MS.gene22979.t1 AT3G06250 29.556 450 268 9 127 574 194 596 6.51e-54 196
MS.gene22979.t1 AT1G10240 28.326 466 320 9 121 577 46 506 6.43e-53 192
MS.gene22979.t1 AT1G10240 28.326 466 320 9 121 577 46 506 6.43e-53 192
MS.gene22979.t1 AT2G27110 28.913 460 293 9 120 577 46 473 1.07e-52 193
MS.gene22979.t1 AT2G27110 28.913 460 293 9 120 577 46 473 1.07e-52 193
MS.gene22979.t1 AT5G18960 29.736 454 265 11 127 574 215 620 1.56e-50 187
MS.gene22979.t1 AT5G18960 29.736 454 265 11 127 574 215 620 1.56e-50 187
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 1 402 1.23e-48 181
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 42 443 1.23e-48 181
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 1 402 1.43e-48 181
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 42 443 2.15e-48 181
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 42 443 2.15e-48 181
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 42 443 2.57e-48 180
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 42 443 2.57e-48 180
MS.gene22979.t1 AT2G32250 26.562 448 280 7 127 571 42 443 2.57e-48 180
MS.gene22979.t1 AT1G80010 27.802 464 299 10 127 571 99 545 7.45e-46 172
MS.gene22979.t1 AT4G38170 31.250 272 181 3 307 577 27 293 4.34e-45 168
MS.gene22979.t1 AT2G27110 32.734 278 181 4 302 577 55 328 1.94e-44 168
MS.gene22979.t1 AT1G52520 26.490 453 289 11 127 564 89 512 7.88e-42 160
MS.gene22979.t1 AT4G19990 25.926 459 288 7 128 571 26 447 2.57e-40 157
MS.gene22979.t1 AT4G19990 25.926 459 288 7 128 571 40 461 3.06e-40 156
MS.gene22979.t1 AT4G19990 25.926 459 288 7 128 571 26 447 3.29e-40 156
MS.gene22979.t1 AT4G19990 25.926 459 288 7 128 571 26 447 3.29e-40 156
MS.gene22979.t1 AT4G19990 25.926 459 288 7 128 571 26 447 4.75e-40 156
MS.gene22979.t1 AT4G19990 25.926 459 288 7 128 571 26 447 4.75e-40 156
MS.gene22979.t1 AT5G28530 25.359 418 291 8 129 529 61 474 1.29e-37 148
MS.gene22979.t1 AT5G28530 25.359 418 291 8 129 529 61 474 1.29e-37 148
MS.gene22979.t1 AT5G28530 25.359 418 291 8 129 529 61 474 1.46e-37 148
MS.gene22979.t1 AT4G19990 25.176 425 266 7 162 571 3 390 2.06e-33 135
MS.gene22979.t1 AT5G28530 22.604 407 253 10 129 529 61 411 4.26e-19 91.7
MS.gene22979.t1 AT5G28530 22.604 407 253 10 129 529 61 411 4.61e-19 91.7
MS.gene22979.t1 AT3G59470 46.000 100 52 2 128 227 75 172 1.20e-18 86.3
MS.gene22979.t1 AT3G59470 46.000 100 52 2 128 227 75 172 1.20e-18 86.3
MS.gene22979.t1 AT3G59470 46.000 100 52 2 128 227 87 184 1.73e-18 86.3
MS.gene22979.t1 AT2G43280 40.336 119 64 5 129 242 28 144 8.57e-15 73.9
MS.gene22979.t1 AT3G07500 42.574 101 57 1 127 227 37 136 6.00e-14 71.6
MS.gene22979.t1 AT4G12850 37.391 115 65 3 124 238 12 119 6.96e-13 66.6
MS.gene22979.t1 AT2G43280 38.614 101 56 4 138 234 2 100 2.12e-12 66.2
MS.gene22979.t1 AT4G12850 37.864 103 60 2 124 226 12 110 6.28e-12 63.9
MS.gene22979.t1 AT4G12850 37.864 103 60 2 124 226 12 110 4.57e-11 62.8

Find 97 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAATAACGAACATATTT+TGG 0.058049 7.2:-6414305 MS.gene22979:CDS
TCAAAATCTGAGCAGAATTT+AGG 0.213308 7.2:+6413919 None:intergenic
CATTGAACGCCAGTCTTTAC+TGG 0.228456 7.2:+6416290 None:intergenic
TAGGGAAGCTTTCTCTAAAA+AGG 0.234957 7.2:+6416199 None:intergenic
TTTGGTATTCGCCGGGAATA+TGG 0.246416 7.2:-6414837 MS.gene22979:CDS
CATAATCCATGAAATGTTTC+TGG 0.254623 7.2:+6414000 None:intergenic
CTCCATTCGTAGTACATGTT+TGG 0.277919 7.2:-6416322 MS.gene22979:CDS
AGGATCTGGTCGTCGAGGGC+TGG 0.281856 7.2:-6416383 MS.gene22979:CDS
TGGTTCGAAGGTAATTCTTA+TGG 0.292735 7.2:+6414436 None:intergenic
ATAATGTTCCTGACGATTCT+TGG 0.303754 7.2:-6413828 MS.gene22979:CDS
ACATATTCATGGAAATCTTT+TGG 0.303983 7.2:+6414507 None:intergenic
CTTTAGCGATTGCAATCTTT+TGG 0.306742 7.2:+6414416 None:intergenic
CGCTTTCCGCATCGTCGCTT+TGG 0.307771 7.2:-6415321 MS.gene22979:CDS
CCTGTTCTTGTTTCTGCTCT+AGG 0.316546 7.2:+6414714 None:intergenic
ACAACATTCAGACTTACTTT+TGG 0.318547 7.2:-6416245 MS.gene22979:CDS
GCACAGATGATAAATGATTA+TGG 0.324686 7.2:-6414276 MS.gene22979:CDS
ATTTCACTTGATCGAAAGAT+TGG 0.335890 7.2:-6414672 MS.gene22979:CDS
AACACCTCGATCACCCTCTT+TGG 0.350502 7.2:+6414764 None:intergenic
GGATCTGGTCGTCGAGGGCT+GGG 0.360500 7.2:-6416382 MS.gene22979:CDS
CTGGTCGTCGAGGGCTGGGC+GGG 0.362659 7.2:-6416378 MS.gene22979:CDS
CTTGCCTTGACACATATTCA+TGG 0.375929 7.2:+6414496 None:intergenic
ACTATGCCAGAAACATTTCA+TGG 0.379747 7.2:-6414006 MS.gene22979:CDS
AAACAATTCCTTCGTTTCAA+TGG 0.386831 7.2:-6414122 MS.gene22979:CDS
CACAACATATAAGACAAATA+AGG 0.388926 7.2:-6414226 MS.gene22979:CDS
CATTTCATGGATTATGCACT+TGG 0.390828 7.2:-6413993 MS.gene22979:CDS
TCCATTCGTAGTACATGTTT+GGG 0.395637 7.2:-6416321 MS.gene22979:CDS
CGACCACTTGGAGTATTTGT+TGG 0.400776 7.2:-6414198 MS.gene22979:CDS
CAGTAAAGACTGGCGTTCAA+TGG 0.410584 7.2:-6416289 MS.gene22979:CDS
TACAGCAAGAAAACCGGGTT+TGG 0.421336 7.2:-6414855 MS.gene22979:CDS
AACGAGTACAGCAAGAAAAC+CGG 0.424207 7.2:-6414861 MS.gene22979:CDS
AGATTGCAATCGCTAAAGTA+TGG 0.431349 7.2:-6414411 MS.gene22979:CDS
TTATATACCACAGTTAGAAA+TGG 0.432695 7.2:-6414919 MS.gene22979:intron
CACTTTGAAAGGGTTGTCAA+TGG 0.439872 7.2:-6413649 MS.gene22979:CDS
GTTGGTGGAAAAGAAATGAT+TGG 0.443224 7.2:-6414474 MS.gene22979:CDS
TTGGAAACACTGCAAATTGA+AGG 0.443749 7.2:+6415417 None:intergenic
TGAAATTCGTAAAAGAATGA+AGG 0.445346 7.2:+6414342 None:intergenic
CCTAGAGCAGAAACAAGAAC+AGG 0.449488 7.2:-6414714 MS.gene22979:CDS
CATTGCTTTAGTACGAGCAT+GGG 0.449874 7.2:+6413553 None:intergenic
ATAAATGATTATGGATACTT+TGG 0.469884 7.2:-6414267 MS.gene22979:CDS
TCTTCGCAGAGTTGCTAACC+TGG 0.474282 7.2:-6415387 MS.gene22979:CDS
AGTAAAGACTGGCGTTCAAT+GGG 0.476885 7.2:-6416288 MS.gene22979:CDS
ATTGTGTTAGCTGATGAATC+TGG 0.477279 7.2:-6414537 MS.gene22979:CDS
GCAGTGAAAGATGGTGCTCC+AGG 0.485581 7.2:+6415369 None:intergenic
CACTGGTCAAGCTGCTGCAA+TGG 0.490437 7.2:-6414046 MS.gene22979:CDS
TCATTGCTTTAGTACGAGCA+TGG 0.495271 7.2:+6413552 None:intergenic
TATGCCTCTGCATGTGGAAG+GGG 0.499338 7.2:-6416346 MS.gene22979:CDS
GGTATGCCTCTGCATGTGGA+AGG 0.501698 7.2:-6416348 MS.gene22979:CDS
AACCGGGTTTGGTATTCGCC+GGG 0.502609 7.2:-6414844 MS.gene22979:CDS
AGGTGGTTGACTTTATTCCT+TGG 0.505669 7.2:-6414641 MS.gene22979:CDS
AAACCGGGTTTGGTATTCGC+CGG 0.515133 7.2:-6414845 MS.gene22979:CDS
GAGGGCTGGGCGGGCCTCTG+TGG 0.523621 7.2:-6416369 MS.gene22979:CDS
ATGCATCGATTTACATGAAG+AGG 0.524817 7.2:-6413893 MS.gene22979:CDS
TCAAGCTGCTGCAATGGCTA+AGG 0.535510 7.2:-6414040 MS.gene22979:CDS
GTATGCAGCCAAGAATCGTC+AGG 0.537038 7.2:+6413820 None:intergenic
CTGTGGTATGCCTCTGCATG+TGG 0.537058 7.2:-6416352 MS.gene22979:CDS
GTATGCCTCTGCATGTGGAA+GGG 0.538318 7.2:-6416347 MS.gene22979:CDS
GGCGTTCAATGGGTGTGACT+AGG 0.546941 7.2:-6416278 MS.gene22979:CDS
TCGCTAAAGTATGGTGAAGT+GGG 0.548741 7.2:-6414402 MS.gene22979:CDS
TTGTTGGTCTTAATAATCAC+AGG 0.549448 7.2:-6414182 MS.gene22979:CDS
AAACCTAAAACAATTCTCAC+TGG 0.549614 7.2:-6414063 MS.gene22979:CDS
ATGTAAATCATCTGTATCAA+AGG 0.550494 7.2:-6413945 MS.gene22979:CDS
ACCCAAACATGTACTACGAA+TGG 0.553997 7.2:+6416320 None:intergenic
GCCTCGGTTGAAAATGAAGA+AGG 0.556389 7.2:-6413578 MS.gene22979:CDS
AGAAACAAGAACAGGGTGTA+CGG 0.558156 7.2:-6414706 MS.gene22979:CDS
AGCGACGATGCGGAAAGCGC+CGG 0.558183 7.2:+6415325 None:intergenic
TCAAATAACCATTGAAACGA+AGG 0.562822 7.2:+6414114 None:intergenic
CTGGTAGGATCTGGTCGTCG+AGG 0.576373 7.2:-6416388 MS.gene22979:intron
TCTGGTCGTCGAGGGCTGGG+CGG 0.583876 7.2:-6416379 MS.gene22979:CDS
ATTGCTTTAGTACGAGCATG+GGG 0.590634 7.2:+6413554 None:intergenic
TGGTAGGATCTGGTCGTCGA+GGG 0.592762 7.2:-6416387 MS.gene22979:intron
AATAAGGATTATCGACCACT+TGG 0.593742 7.2:-6414210 MS.gene22979:CDS
TGACAAATTGCAGTGAAAGA+TGG 0.601663 7.2:+6415360 None:intergenic
ATCGCTAAAGTATGGTGAAG+TGG 0.605025 7.2:-6414403 MS.gene22979:CDS
AGTCAAGACATAAATTGCCT+CGG 0.609036 7.2:-6413594 MS.gene22979:CDS
TGCTCCAAAGAGGGTGATCG+AGG 0.611493 7.2:-6414768 MS.gene22979:CDS
AAGATTTGTATGCTCCAAAG+AGG 0.615497 7.2:-6414778 MS.gene22979:CDS
TTCCCGGCGAATACCAAACC+CGG 0.617327 7.2:+6414842 None:intergenic
TCGAAAGATTGGAAAATACA+AGG 0.618453 7.2:-6414661 MS.gene22979:CDS
TTTGTCATTCTATCTCACTC+CGG 0.619299 7.2:-6415344 MS.gene22979:CDS
ATTTCCATGAATATGTGTCA+AGG 0.622616 7.2:-6414500 MS.gene22979:CDS
ACATTTCTCAAAGCAATGAG+TGG 0.627083 7.2:-6414090 MS.gene22979:CDS
AGACCAACAAATACTCCAAG+TGG 0.630003 7.2:+6414195 None:intergenic
TTATGGATACTTTGGTGATG+TGG 0.632634 7.2:-6414259 MS.gene22979:CDS
ACGAGTACAGCAAGAAAACC+GGG 0.635354 7.2:-6414860 MS.gene22979:CDS
GAATATGTGTCAAGGCAAGT+TGG 0.638062 7.2:-6414492 MS.gene22979:CDS
TATGTGTCAAGGCAAGTTGG+TGG 0.638173 7.2:-6414489 MS.gene22979:CDS
TGAAGAGTGTGATTATGCCA+AGG 0.643214 7.2:+6414624 None:intergenic
CATGAGCCAAAGCGACGATG+CGG 0.648849 7.2:+6415315 None:intergenic
GAGACCCCTTCCACATGCAG+AGG 0.653522 7.2:+6416342 None:intergenic
AGATTTGTATGCTCCAAAGA+GGG 0.656455 7.2:-6414777 MS.gene22979:CDS
GTGTTGTGTCCAGTAAAGAC+TGG 0.665002 7.2:-6416299 MS.gene22979:CDS
ATCATGTGAACAAACTCTTG+CGG 0.666069 7.2:+6414600 None:intergenic
CTAGAGCAGAAACAAGAACA+GGG 0.672182 7.2:-6414713 MS.gene22979:CDS
ATTAGTGAACATGTTACGTG+AGG 0.681463 7.2:-6417421 None:intergenic
TTGCTTTAGTACGAGCATGG+GGG 0.692638 7.2:+6413555 None:intergenic
AAAGATTGGAAAATACAAGG+TGG 0.727764 7.2:-6414658 MS.gene22979:CDS
CATGCAGAGGCATACCACAG+AGG 0.768593 7.2:+6416355 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAATAAATAATTAAAAA+AGG - chr7.2:6415437-6415456 MS.gene22979:CDS 0.0%
!! AAAAAAAAAAAATTGAAAGA+AGG - chr7.2:6415275-6415294 MS.gene22979:intron 10.0%
!! TCTATTAAGAATAATTAAAT+TGG - chr7.2:6413593-6413612 MS.gene22979:CDS 10.0%
!!! AATTTTATTTATATATAAGC+AGG - chr7.2:6414123-6414142 MS.gene22979:CDS 10.0%
!! AATAAAAATCAGTATATAAC+AGG + chr7.2:6415807-6415826 None:intergenic 15.0%
!! ATAAAAATCAGTATATAACA+GGG + chr7.2:6415806-6415825 None:intergenic 15.0%
!! ATGAATAATAAAATCAAAAG+AGG + chr7.2:6415716-6415735 None:intergenic 15.0%
!! TGAATAATAAAATCAAAAGA+GGG + chr7.2:6415715-6415734 None:intergenic 15.0%
!!! AATTTTATTTATCTATAAGC+AGG - chr7.2:6414169-6414188 MS.gene22979:CDS 15.0%
!!! TTAATTTAGTTTTGATTCAT+TGG - chr7.2:6413990-6414009 MS.gene22979:CDS 15.0%
!! AAGAATAATAAGATCAAAAC+AGG + chr7.2:6415889-6415908 None:intergenic 20.0%
!! AGAATAATAAGATCAAAACA+GGG + chr7.2:6415888-6415907 None:intergenic 20.0%
!! ATAAATGATTATGGATACTT+TGG - chr7.2:6416696-6416715 MS.gene22979:intron 20.0%
!! ATTTATTGAATGAACCTAAA+AGG - chr7.2:6413742-6413761 MS.gene22979:CDS 20.0%
!! TAAATAATGCTGAATTGAAA+AGG + chr7.2:6414094-6414113 None:intergenic 20.0%
!!! ATTCTTTTACGAATTTCAAA+TGG - chr7.2:6416626-6416645 MS.gene22979:intron 20.0%
!!! TTCAATGTTTATTTTTCTAG+CGG + chr7.2:6414369-6414388 None:intergenic 20.0%
!!! TTGATAACAAAATAACAATG+CGG + chr7.2:6415687-6415706 None:intergenic 20.0%
!!! TTTTTATTAACTTGCTAGAT+TGG - chr7.2:6414313-6414332 MS.gene22979:CDS 20.0%
! ATGTAAATCATCTGTATCAA+AGG - chr7.2:6417018-6417037 MS.gene22979:intron 25.0%
! CACAACATATAAGACAAATA+AGG - chr7.2:6416737-6416756 MS.gene22979:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr7.2:6413695-6413714 MS.gene22979:CDS 25.0%
! CATTCAATAAATGATGTATG+TGG + chr7.2:6413714-6413695 None:intergenic 25.0%
! GAGAAGAAAATTGTAAGTTT+GGG - chr7.2:6414875-6414894 MS.gene22979:CDS 25.0%
! GGAAATAAAAGCAAAAAAGA+TGG - chr7.2:6416147-6416166 MS.gene22979:intron 25.0%
! GTGGTTTAAATGAAAATCAA+TGG - chr7.2:6415389-6415408 MS.gene22979:CDS 25.0%
! TAGACTCTATTAAATGTGTA+TGG + chr7.2:6413920-6413939 None:intergenic 25.0%
! TGAAATTCGTAAAAGAATGA+AGG + chr7.2:6416624-6416643 None:intergenic 25.0%
! TGTAGGTCTAAATCAAAAAA+GGG - chr7.2:6414435-6414454 MS.gene22979:CDS 25.0%
! TTATATACCACAGTTAGAAA+TGG - chr7.2:6416044-6416063 MS.gene22979:intron 25.0%
! TTGTAGGTCTAAATCAAAAA+AGG - chr7.2:6414434-6414453 MS.gene22979:CDS 25.0%
!! AAGATTCGTTCATATTTTCT+GGG + chr7.2:6415939-6415958 None:intergenic 25.0%
!! AATTTTTCACTCACTTTGAA+AGG - chr7.2:6417303-6417322 MS.gene22979:intron 25.0%
!! ACATATTCATGGAAATCTTT+TGG + chr7.2:6416459-6416478 None:intergenic 25.0%
!! AGCAAATAACGAACATATTT+TGG - chr7.2:6416658-6416677 MS.gene22979:intron 25.0%
!! GCAAATAACGAACATATTTT+GGG - chr7.2:6416659-6416678 MS.gene22979:intron 25.0%
!!! ATTTTTCACTCACTTTGAAA+GGG - chr7.2:6417304-6417323 MS.gene22979:intron 25.0%
!!! TAAGCAAATTTTGACCTTTT+AGG + chr7.2:6413759-6413778 None:intergenic 25.0%
!!! TTTTCAAGTGAAGGAAAAAT+GGG - chr7.2:6417169-6417188 MS.gene22979:intron 25.0%
!!! TTTTTCAAGTGAAGGAAAAA+TGG - chr7.2:6417168-6417187 MS.gene22979:intron 25.0%
AAACAATTCCTTCGTTTCAA+TGG - chr7.2:6416841-6416860 MS.gene22979:intron 30.0%
AAACCTAAAACAATTCTCAC+TGG - chr7.2:6416900-6416919 MS.gene22979:intron 30.0%
AAAGATTGGAAAATACAAGG+TGG - chr7.2:6416305-6416324 MS.gene22979:CDS 30.0%
ACTCCAGTTATTAACCTTTA+AGG - chr7.2:6413832-6413851 MS.gene22979:CDS 30.0%
ATTTCACTTGATCGAAAGAT+TGG - chr7.2:6416291-6416310 MS.gene22979:CDS 30.0%
ATTTCCATGAATATGTGTCA+AGG - chr7.2:6416463-6416482 MS.gene22979:intron 30.0%
CAATATCCAAAAAGACATTG+TGG - chr7.2:6415996-6416015 MS.gene22979:intron 30.0%
CACGTAAACTTACTTGATAA+TGG - chr7.2:6413618-6413637 MS.gene22979:CDS 30.0%
CATAATCCATGAAATGTTTC+TGG + chr7.2:6416966-6416985 None:intergenic 30.0%
CATTATCAAGTAAGTTTACG+TGG + chr7.2:6413620-6413639 None:intergenic 30.0%
CTAAATCAAAAAAGGGGTTA+GGG - chr7.2:6414442-6414461 MS.gene22979:CDS 30.0%
CTCGACTAAATTAGACTATT+AGG - chr7.2:6414947-6414966 MS.gene22979:intron 30.0%
GCACAGATGATAAATGATTA+TGG - chr7.2:6416687-6416706 MS.gene22979:intron 30.0%
GGAGAAGAAAATTGTAAGTT+TGG - chr7.2:6414874-6414893 MS.gene22979:CDS 30.0%
GTAGGTCTAAATCAAAAAAG+GGG - chr7.2:6414436-6414455 MS.gene22979:CDS 30.0%
TCAAAATCTGAGCAGAATTT+AGG + chr7.2:6417047-6417066 None:intergenic 30.0%
TCAAATAACCATTGAAACGA+AGG + chr7.2:6416852-6416871 None:intergenic 30.0%
TCACCTTAAAGGTTAATAAC+TGG + chr7.2:6413838-6413857 None:intergenic 30.0%
TCGAAAGATTGGAAAATACA+AGG - chr7.2:6416302-6416321 MS.gene22979:CDS 30.0%
TCTAAATCAAAAAAGGGGTT+AGG - chr7.2:6414441-6414460 MS.gene22979:CDS 30.0%
TCTAGTATTCTATACTCTAG+CGG + chr7.2:6413871-6413890 None:intergenic 30.0%
TGCTTATAAATGAAACCAGA+GGG + chr7.2:6413656-6413675 None:intergenic 30.0%
TTGAAACCTGAAAAAGTCTA+GGG + chr7.2:6414785-6414804 None:intergenic 30.0%
TTGAATCCAAATTATGAGCT+CGG - chr7.2:6414384-6414403 MS.gene22979:CDS 30.0%
TTGCTTATAAATGAAACCAG+AGG + chr7.2:6413657-6413676 None:intergenic 30.0%
! ACAACATTCAGACTTACTTT+TGG - chr7.2:6414718-6414737 MS.gene22979:CDS 30.0%
! ATTGCCATTTACTCTCTAAA+TGG + chr7.2:6415340-6415359 None:intergenic 30.0%
! GAAGATTCGTTCATATTTTC+TGG + chr7.2:6415940-6415959 None:intergenic 30.0%
! TTCTTTCTAACTTGTGTCTT+GGG + chr7.2:6415257-6415276 None:intergenic 30.0%
! TTTCTTTCTAACTTGTGTCT+TGG + chr7.2:6415258-6415277 None:intergenic 30.0%
!! CAACATTCAGACTTACTTTT+GGG - chr7.2:6414719-6414738 MS.gene22979:CDS 30.0%
!! TGCTTTTATTTCCATATTCC+CGG + chr7.2:6416140-6416159 None:intergenic 30.0%
!! TTGTTGGTCTTAATAATCAC+AGG - chr7.2:6416781-6416800 MS.gene22979:intron 30.0%
!!! GCATACAATTTTTCAAGTGA+AGG - chr7.2:6417160-6417179 MS.gene22979:intron 30.0%
AAGATTTGTATGCTCCAAAG+AGG - chr7.2:6416185-6416204 MS.gene22979:intron 35.0%
AAGCCTAACAATTGAACAAC+CGG + chr7.2:6414909-6414928 None:intergenic 35.0%
AATAAGGATTATCGACCACT+TGG - chr7.2:6416753-6416772 MS.gene22979:intron 35.0%
ACAAAGACTACCCTAAATGT+GGG - chr7.2:6415026-6415045 MS.gene22979:intron 35.0%
ACATGTCAGTTGGATATACA+AGG + chr7.2:6415371-6415390 None:intergenic 35.0%
ACATTTCTCAAAGCAATGAG+TGG - chr7.2:6416873-6416892 MS.gene22979:intron 35.0%
ACTATGCCAGAAACATTTCA+TGG - chr7.2:6416957-6416976 MS.gene22979:intron 35.0%
AGATTGCAATCGCTAAAGTA+TGG - chr7.2:6416552-6416571 MS.gene22979:intron 35.0%
AGATTTGTATGCTCCAAAGA+GGG - chr7.2:6416186-6416205 MS.gene22979:intron 35.0%
AGTCAAAGTCTTCTCTTGAA+AGG - chr7.2:6415111-6415130 MS.gene22979:intron 35.0%
AGTCAAGACATAAATTGCCT+CGG - chr7.2:6417369-6417388 MS.gene22979:intron 35.0%
ATAATGTTCCTGACGATTCT+TGG - chr7.2:6417135-6417154 MS.gene22979:intron 35.0%
ATCATGTGAACAAACTCTTG+CGG + chr7.2:6416366-6416385 None:intergenic 35.0%
ATTGTGTTAGCTGATGAATC+TGG - chr7.2:6416426-6416445 MS.gene22979:intron 35.0%
CAAAAAGACATTGTGGAACA+TGG - chr7.2:6416003-6416022 MS.gene22979:intron 35.0%
CAGTTGGATATACAAGGAAA+GGG + chr7.2:6415365-6415384 None:intergenic 35.0%
CATTTAAACCACATGTCAGT+TGG + chr7.2:6415381-6415400 None:intergenic 35.0%
CATTTACTCTCTAAATGGAG+AGG + chr7.2:6415335-6415354 None:intergenic 35.0%
CTCTCCATTTAGAGAGTAAA+TGG - chr7.2:6415333-6415352 MS.gene22979:CDS 35.0%
CTTAGATGTTTGGTAAGCAA+GGG - chr7.2:6414970-6414989 MS.gene22979:intron 35.0%
GACTATTAGGCTTAGATGTT+TGG - chr7.2:6414960-6414979 MS.gene22979:intron 35.0%
GACTATTTCAAATAACGTCG+AGG + chr7.2:6415078-6415097 None:intergenic 35.0%
GCTAGAGAAATTCACCTTAA+AGG + chr7.2:6413849-6413868 None:intergenic 35.0%
GTTAGTATATTCGAATCGAG+AGG - chr7.2:6414410-6414429 MS.gene22979:CDS 35.0%
GTTGAAACCTGAAAAAGTCT+AGG + chr7.2:6414786-6414805 None:intergenic 35.0%
TACCAGATTAACCCCATATT+GGG + chr7.2:6414561-6414580 None:intergenic 35.0%
TCAAACTCCATTTCTAACTG+TGG + chr7.2:6416054-6416073 None:intergenic 35.0%
TCAGTTGGATATACAAGGAA+AGG + chr7.2:6415366-6415385 None:intergenic 35.0%
TCCATTCGTAGTACATGTTT+GGG - chr7.2:6414642-6414661 MS.gene22979:CDS 35.0%
TGAATCCAAATTATGAGCTC+GGG - chr7.2:6414385-6414404 MS.gene22979:CDS 35.0%
TGACAAATTGCAGTGAAAGA+TGG + chr7.2:6415606-6415625 None:intergenic 35.0%
TGATGAAGAAGAGTGATTTC+TGG + chr7.2:6415500-6415519 None:intergenic 35.0%
TGCTTATAATAGTGACCGAA+GGG - chr7.2:6413773-6413792 MS.gene22979:CDS 35.0%
TGGTTCGAAGGTAATTCTTA+TGG + chr7.2:6416530-6416549 None:intergenic 35.0%
TTAGATGTTTGGTAAGCAAG+GGG - chr7.2:6414971-6414990 MS.gene22979:intron 35.0%
TTCTCTACATCTTCGACTAA+TGG + chr7.2:6415967-6415986 None:intergenic 35.0%
TTGCTTATAATAGTGACCGA+AGG - chr7.2:6413772-6413791 MS.gene22979:CDS 35.0%
TTGGAAACACTGCAAATTGA+AGG + chr7.2:6415549-6415568 None:intergenic 35.0%
TTGTATATCCAACTGACATG+TGG - chr7.2:6415370-6415389 MS.gene22979:CDS 35.0%
TTTGTCATTCTATCTCACTC+CGG - chr7.2:6415619-6415638 MS.gene22979:intron 35.0%
! AGGGAAGCTTTCTCTAAAAA+GGG + chr7.2:6414766-6414785 None:intergenic 35.0%
! ATTGAAGGAGAGTGATTTTC+TGG + chr7.2:6415534-6415553 None:intergenic 35.0%
! CAAGAGAAGACTTTGACTTT+GGG + chr7.2:6415109-6415128 None:intergenic 35.0%
! CATGTTCCACAATGTCTTTT+TGG + chr7.2:6416005-6416024 None:intergenic 35.0%
! CATTTCATGGATTATGCACT+TGG - chr7.2:6416970-6416989 MS.gene22979:intron 35.0%
! CTTTAGCGATTGCAATCTTT+TGG + chr7.2:6416550-6416569 None:intergenic 35.0%
! GTTGGTGGAAAAGAAATGAT+TGG - chr7.2:6416489-6416508 MS.gene22979:intron 35.0%
! TAGGGAAGCTTTCTCTAAAA+AGG + chr7.2:6414767-6414786 None:intergenic 35.0%
! TCAAGAGAAGACTTTGACTT+TGG + chr7.2:6415110-6415129 None:intergenic 35.0%
! TCTTTCTAACTTGTGTCTTG+GGG + chr7.2:6415256-6415275 None:intergenic 35.0%
! TGACCAGTGAGAATTGTTTT+AGG + chr7.2:6416906-6416925 None:intergenic 35.0%
! TTGAAGGAGAGTGATTTTCT+GGG + chr7.2:6415533-6415552 None:intergenic 35.0%
!! ATGCATCGATTTACATGAAG+AGG - chr7.2:6417070-6417089 MS.gene22979:intron 35.0%
!! TCAATTGTTAGGCTTGTTAG+AGG - chr7.2:6414914-6414933 MS.gene22979:intron 35.0%
!! TTACTTTTGGGAGGATGTTT+TGG - chr7.2:6414731-6414750 MS.gene22979:CDS 35.0%
!! TTATGGATACTTTGGTGATG+TGG - chr7.2:6416704-6416723 MS.gene22979:intron 35.0%
!!! AAAGTGAGTTTTTGAGTGCA+TGG - chr7.2:6417093-6417112 MS.gene22979:intron 35.0%
!!! AAGTGAGTTTTTGAGTGCAT+GGG - chr7.2:6417094-6417113 MS.gene22979:intron 35.0%
!!! ATTATTTTTGTGCGCTGAAG+TGG + chr7.2:6414047-6414066 None:intergenic 35.0%
!!! ATTGCAATCTTTTGGTTCGA+AGG + chr7.2:6416542-6416561 None:intergenic 35.0%
AAAAAAGGGGTTAGGGATCA+AGG - chr7.2:6414449-6414468 MS.gene22979:CDS 40.0%
AAATGAAACCAGAGGGAGTA+TGG + chr7.2:6413649-6413668 None:intergenic 40.0%
AAATGGAGAGGATCTGAACT+CGG + chr7.2:6415323-6415342 None:intergenic 40.0%
AACGAGTACAGCAAGAAAAC+CGG - chr7.2:6416102-6416121 MS.gene22979:intron 40.0%
AAGTGAAGGAAAAATGGGCA+TGG - chr7.2:6417174-6417193 MS.gene22979:intron 40.0%
ACCCAAACATGTACTACGAA+TGG + chr7.2:6414646-6414665 None:intergenic 40.0%
AGAAACAAGAACAGGGTGTA+CGG - chr7.2:6416257-6416276 MS.gene22979:CDS 40.0%
AGACCAACAAATACTCCAAG+TGG + chr7.2:6416771-6416790 None:intergenic 40.0%
AGATCCTTTGTGCCCAATAT+GGG - chr7.2:6414546-6414565 MS.gene22979:CDS 40.0%
AGCTATGTTGGGTAAATGGA+TGG - chr7.2:6414487-6414506 MS.gene22979:CDS 40.0%
AGTAAAGACTGGCGTTCAAT+GGG - chr7.2:6414675-6414694 MS.gene22979:CDS 40.0%
AGTGAAGGAAAAATGGGCAT+GGG - chr7.2:6417175-6417194 MS.gene22979:intron 40.0%
ATCGCTAAAGTATGGTGAAG+TGG - chr7.2:6416560-6416579 MS.gene22979:intron 40.0%
ATTCGAATCGAGAGGTTTGT+AGG - chr7.2:6414418-6414437 MS.gene22979:CDS 40.0%
ATTGCTTTAGTACGAGCATG+GGG + chr7.2:6417412-6417431 None:intergenic 40.0%
CAATATGGGGTTAATCTGGT+AGG - chr7.2:6414560-6414579 MS.gene22979:CDS 40.0%
CATTGCTTTAGTACGAGCAT+GGG + chr7.2:6417413-6417432 None:intergenic 40.0%
CTACCAGATTAACCCCATAT+TGG + chr7.2:6414562-6414581 None:intergenic 40.0%
CTAGAGCAGAAACAAGAACA+GGG - chr7.2:6416250-6416269 MS.gene22979:CDS 40.0%
CTATGTTGGGTAAATGGATG+GGG - chr7.2:6414489-6414508 MS.gene22979:CDS 40.0%
CTCCATTCGTAGTACATGTT+TGG - chr7.2:6414641-6414660 MS.gene22979:CDS 40.0%
CTTCGAAAAACTTTCACTGC+TGG - chr7.2:6417203-6417222 MS.gene22979:intron 40.0%
CTTGCCTTGACACATATTCA+TGG + chr7.2:6416470-6416489 None:intergenic 40.0%
GAATATGTGTCAAGGCAAGT+TGG - chr7.2:6416471-6416490 MS.gene22979:intron 40.0%
GACAAAGACTACCCTAAATG+TGG - chr7.2:6415025-6415044 MS.gene22979:intron 40.0%
GACGCACAACAATAGTAACA+GGG + chr7.2:6415784-6415803 None:intergenic 40.0%
GCTATGTTGGGTAAATGGAT+GGG - chr7.2:6414488-6414507 MS.gene22979:CDS 40.0%
GCTTAGATGTTTGGTAAGCA+AGG - chr7.2:6414969-6414988 MS.gene22979:intron 40.0%
GTGAAGCTATGTTGGGTAAA+TGG - chr7.2:6414483-6414502 MS.gene22979:CDS 40.0%
TCATTGCTTTAGTACGAGCA+TGG + chr7.2:6417414-6417433 None:intergenic 40.0%
TCGCTAAAGTATGGTGAAGT+GGG - chr7.2:6416561-6416580 MS.gene22979:intron 40.0%
! ACTCTGCGAAGAGTGATTTT+TGG + chr7.2:6415568-6415587 None:intergenic 40.0%
! AGGTGGTTGACTTTATTCCT+TGG - chr7.2:6416322-6416341 MS.gene22979:CDS 40.0%
! AGGTTAATAACTGGAGTGTC+CGG + chr7.2:6413829-6413848 None:intergenic 40.0%
! CACTTTGAAAGGGTTGTCAA+TGG - chr7.2:6417314-6417333 MS.gene22979:intron 40.0%
! CATTTAGGGTAGTCTTTGTC+AGG + chr7.2:6415025-6415044 None:intergenic 40.0%
! TGAAGAGTGTGATTATGCCA+AGG + chr7.2:6416342-6416361 None:intergenic 40.0%
!! AAGCTTCCCTAGACTTTTTC+AGG - chr7.2:6414776-6414795 MS.gene22979:CDS 40.0%
!! CATTCAGACTTACTTTTGGG+AGG - chr7.2:6414722-6414741 MS.gene22979:CDS 40.0%
!!! ACAGGCAGACTGTTGTTTTT+GGG - chr7.2:6416799-6416818 MS.gene22979:intron 40.0%
!!! TTTTGGGAGGATGTTTTGGT+TGG - chr7.2:6414735-6414754 MS.gene22979:CDS 40.0%
AACATAGCTTCACCAGCCTT+AGG + chr7.2:6414476-6414495 None:intergenic 45.0%
AAGACTACCCTAAATGTGGG+TGG - chr7.2:6415029-6415048 MS.gene22979:intron 45.0%
AAGGCTGGTGAAGCTATGTT+GGG - chr7.2:6414476-6414495 MS.gene22979:CDS 45.0%
ACCCTAAAATCCTCCTACGT+AGG - chr7.2:6414804-6414823 MS.gene22979:CDS 45.0%
ACGAGTACAGCAAGAAAACC+GGG - chr7.2:6416103-6416122 MS.gene22979:intron 45.0%
ATCCAAATTATGAGCTCGGG+CGG - chr7.2:6414388-6414407 MS.gene22979:CDS 45.0%
CAGTAAAGACTGGCGTTCAA+TGG - chr7.2:6414674-6414693 MS.gene22979:CDS 45.0%
CATTGAACGCCAGTCTTTAC+TGG + chr7.2:6414676-6414695 None:intergenic 45.0%
CCCTAAAATCCTCCTACGTA+GGG - chr7.2:6414805-6414824 MS.gene22979:CDS 45.0%
CCTAGAGCAGAAACAAGAAC+AGG - chr7.2:6416249-6416268 MS.gene22979:CDS 45.0%
CCTTACGTACATACTCCCTT+CGG + chr7.2:6413791-6413810 None:intergenic 45.0%
CGTACGTGGAAGAAAGATAG+AGG + chr7.2:6414998-6415017 None:intergenic 45.0%
GAGATCCTTTGTGCCCAATA+TGG - chr7.2:6414545-6414564 MS.gene22979:CDS 45.0%
GAGCCGGTTGTTCAATTGTT+AGG - chr7.2:6414903-6414922 MS.gene22979:CDS 45.0%
GATCCTTTGTGCCCAATATG+GGG - chr7.2:6414547-6414566 MS.gene22979:CDS 45.0%
GCCTCGGTTGAAAATGAAGA+AGG - chr7.2:6417385-6417404 MS.gene22979:intron 45.0%
GGACGCACAACAATAGTAAC+AGG + chr7.2:6415785-6415804 None:intergenic 45.0%
GGTGAGTGTGGTATATGAAG+CGG - chr7.2:6414853-6414872 MS.gene22979:CDS 45.0%
GTGTTGTGTCCAGTAAAGAC+TGG - chr7.2:6414664-6414683 MS.gene22979:CDS 45.0%
TAACCCCATATTGGGCACAA+AGG + chr7.2:6414553-6414572 None:intergenic 45.0%
TAAGGCTGGTGAAGCTATGT+TGG - chr7.2:6414475-6414494 MS.gene22979:CDS 45.0%
TACAGCAAGAAAACCGGGTT+TGG - chr7.2:6416108-6416127 MS.gene22979:intron 45.0%
TGCCCAATATGGGGTTAATC+TGG - chr7.2:6414556-6414575 MS.gene22979:CDS 45.0%
TGGATAATCCATACTCCCTC+TGG - chr7.2:6413638-6413657 MS.gene22979:CDS 45.0%
TGTACGTAAGGGTCGAAGTT+CGG - chr7.2:6413800-6413819 MS.gene22979:CDS 45.0%
TTGAAAGAAGGATGCAGCGT+TGG - chr7.2:6415287-6415306 MS.gene22979:intron 45.0%
TTGCTTTAGTACGAGCATGG+GGG + chr7.2:6417411-6417430 None:intergenic 45.0%
TTTGGTATTCGCCGGGAATA+TGG - chr7.2:6416126-6416145 MS.gene22979:intron 45.0%
! ACCCTACGTAGGAGGATTTT+AGG + chr7.2:6414809-6414828 None:intergenic 45.0%
! CCCTACGTAGGAGGATTTTA+GGG + chr7.2:6414808-6414827 None:intergenic 45.0%
! CGAAGGGAGTATGTACGTAA+GGG - chr7.2:6413789-6413808 MS.gene22979:CDS 45.0%
! CGACCACTTGGAGTATTTGT+TGG - chr7.2:6416765-6416784 MS.gene22979:intron 45.0%
! GAGAAGACTTTGACTTTGGG+AGG + chr7.2:6415106-6415125 None:intergenic 45.0%
! GCCTTCTTCATTTTCAACCG+AGG + chr7.2:6417389-6417408 None:intergenic 45.0%
! GGTTAATAACTGGAGTGTCC+GGG + chr7.2:6413828-6413847 None:intergenic 45.0%
! TATGTGTCAAGGCAAGTTGG+TGG - chr7.2:6416474-6416493 MS.gene22979:intron 45.0%
!! CCTGTTCTTGTTTCTGCTCT+AGG + chr7.2:6416252-6416271 None:intergenic 45.0%
!!! CACAGGCAGACTGTTGTTTT+TGG - chr7.2:6416798-6416817 MS.gene22979:intron 45.0%
!!! CAGGCAGACTGTTGTTTTTG+GGG - chr7.2:6416800-6416819 MS.gene22979:intron 45.0%
!!! GAGTTTTTGAGTGCATGGGA+TGG - chr7.2:6417098-6417117 MS.gene22979:intron 45.0%
!! TTAATAAATTTGTAATTAAT+AGG + chr7.2:6414268-6414287 None:intergenic 5.0%
AACACCTCGATCACCCTCTT+TGG + chr7.2:6416202-6416221 None:intergenic 50.0%
AACCGCCCGAGCTCATAATT+TGG + chr7.2:6414393-6414412 None:intergenic 50.0%
ACACTCTGCCACCCACATTT+AGG + chr7.2:6415040-6415059 None:intergenic 50.0%
AGGAAATGAAGAGACGTGCG+CGG - chr7.2:6415457-6415476 MS.gene22979:intron 50.0%
CACTCTGCCACCCACATTTA+GGG + chr7.2:6415039-6415058 None:intergenic 50.0%
CTCCAGGTTTGTGGATGGAT+GGG - chr7.2:6414829-6414848 MS.gene22979:CDS 50.0%
CTTTGTCAGGTACTCGTACG+TGG + chr7.2:6415012-6415031 None:intergenic 50.0%
GGGGTTAATCTGGTAGGATC+TGG - chr7.2:6414566-6414585 MS.gene22979:CDS 50.0%
GGTTAGGGATCAAGGACCTA+AGG - chr7.2:6414457-6414476 MS.gene22979:CDS 50.0%
GTAAGTTTGGGAGCAAGAGC+CGG - chr7.2:6414887-6414906 MS.gene22979:CDS 50.0%
GTATGCAGCCAAGAATCGTC+AGG + chr7.2:6417146-6417165 None:intergenic 50.0%
GTATGCCTCTGCATGTGGAA+GGG - chr7.2:6414616-6414635 MS.gene22979:CDS 50.0%
TATGCCTCTGCATGTGGAAG+GGG - chr7.2:6414617-6414636 MS.gene22979:CDS 50.0%
TCAAGCTGCTGCAATGGCTA+AGG - chr7.2:6416923-6416942 MS.gene22979:intron 50.0%
TCTCCAGGTTTGTGGATGGA+TGG - chr7.2:6414828-6414847 MS.gene22979:CDS 50.0%
TCTTCGCAGAGTTGCTAACC+TGG - chr7.2:6415576-6415595 MS.gene22979:intron 50.0%
TGTTGGGTAAATGGATGGGG+AGG - chr7.2:6414492-6414511 MS.gene22979:CDS 50.0%
! AAACCGGGTTTGGTATTCGC+CGG - chr7.2:6416118-6416137 MS.gene22979:intron 50.0%
! CCGAAGGGAGTATGTACGTA+AGG - chr7.2:6413788-6413807 MS.gene22979:CDS 50.0%
!!! GGAGGATGTTTTGGTTGGTG+AGG - chr7.2:6414740-6414759 MS.gene22979:CDS 50.0%
ACGTAGGGTCTCCAGGTTTG+TGG - chr7.2:6414820-6414839 MS.gene22979:CDS 55.0%
AGGGATCAAGGACCTAAGGC+TGG - chr7.2:6414461-6414480 MS.gene22979:CDS 55.0%
AGGGTCTCCAGGTTTGTGGA+TGG - chr7.2:6414824-6414843 MS.gene22979:CDS 55.0%
CAAACCTGGAGACCCTACGT+AGG + chr7.2:6414820-6414839 None:intergenic 55.0%
CACTGGTCAAGCTGCTGCAA+TGG - chr7.2:6416917-6416936 MS.gene22979:intron 55.0%
CAGGTTTGTGGATGGATGGG+AGG - chr7.2:6414832-6414851 MS.gene22979:CDS 55.0%
CATGAGCCAAAGCGACGATG+CGG + chr7.2:6415651-6415670 None:intergenic 55.0%
CTCCCATCCATCCACAAACC+TGG + chr7.2:6414834-6414853 None:intergenic 55.0%
CTGTGGTATGCCTCTGCATG+TGG - chr7.2:6414611-6414630 MS.gene22979:CDS 55.0%
GCAGTGAAAGATGGTGCTCC+AGG + chr7.2:6415597-6415616 None:intergenic 55.0%
GGAAATGAAGAGACGTGCGC+GGG - chr7.2:6415458-6415477 MS.gene22979:intron 55.0%
GGCGTTCAATGGGTGTGACT+AGG - chr7.2:6414685-6414704 MS.gene22979:CDS 55.0%
GGTATGCCTCTGCATGTGGA+AGG - chr7.2:6414615-6414634 MS.gene22979:CDS 55.0%
TGCTCCAAAGAGGGTGATCG+AGG - chr7.2:6416195-6416214 MS.gene22979:CDS 55.0%
TGGTAGGATCTGGTCGTCGA+GGG - chr7.2:6414576-6414595 MS.gene22979:CDS 55.0%
TTCCCGGCGAATACCAAACC+CGG + chr7.2:6416124-6416143 None:intergenic 55.0%
! AACCGGGTTTGGTATTCGCC+GGG - chr7.2:6416119-6416138 MS.gene22979:intron 55.0%
! ATGGGGAGGTTGCTTTCACG+AGG - chr7.2:6414506-6414525 MS.gene22979:CDS 55.0%
! CATGCAGAGGCATACCACAG+AGG + chr7.2:6414611-6414630 None:intergenic 55.0%
! TGGGGAGGTTGCTTTCACGA+GGG - chr7.2:6414507-6414526 MS.gene22979:CDS 55.0%
ACCTGGAGACCCTACGTAGG+AGG + chr7.2:6414817-6414836 None:intergenic 60.0%
CGCTTTCCGCATCGTCGCTT+TGG - chr7.2:6415642-6415661 MS.gene22979:intron 60.0%
CTGGTAGGATCTGGTCGTCG+AGG - chr7.2:6414575-6414594 MS.gene22979:CDS 60.0%
GAGACCCCTTCCACATGCAG+AGG + chr7.2:6414624-6414643 None:intergenic 60.0%
GGATGGATGGGAGGTGAGTG+TGG - chr7.2:6414841-6414860 MS.gene22979:CDS 60.0%
TCCTCCTACGTAGGGTCTCC+AGG - chr7.2:6414813-6414832 MS.gene22979:CDS 60.0%
TGAAGAGACGTGCGCGGGAA+AGG - chr7.2:6415463-6415482 MS.gene22979:intron 60.0%
AAGGGTCGAAGTTCGGCGCC+CGG - chr7.2:6413807-6413826 MS.gene22979:CDS 65.0%
AGGATCTGGTCGTCGAGGGC+TGG - chr7.2:6414580-6414599 MS.gene22979:CDS 65.0%
GGATCTGGTCGTCGAGGGCT+GGG - chr7.2:6414581-6414600 MS.gene22979:CDS 65.0%
! AGCGACGATGCGGAAAGCGC+CGG + chr7.2:6415641-6415660 None:intergenic 65.0%
TCTGGTCGTCGAGGGCTGGG+CGG - chr7.2:6414584-6414603 MS.gene22979:CDS 70.0%
CTGGTCGTCGAGGGCTGGGC+GGG - chr7.2:6414585-6414604 MS.gene22979:CDS 75.0%
! GAGGGCTGGGCGGGCCTCTG+TGG - chr7.2:6414594-6414613 MS.gene22979:CDS 80.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 6413552 6417433 6413552 ID=MS.gene22979
chr7.2 mRNA 6413552 6417433 6413552 ID=MS.gene22979.t1;Parent=MS.gene22979
chr7.2 exon 6417422 6417433 6417422 ID=MS.gene22979.t1.exon1;Parent=MS.gene22979.t1
chr7.2 CDS 6417422 6417433 6417422 ID=cds.MS.gene22979.t1;Parent=MS.gene22979.t1
chr7.2 exon 6416188 6416403 6416188 ID=MS.gene22979.t1.exon2;Parent=MS.gene22979.t1
chr7.2 CDS 6416188 6416403 6416188 ID=cds.MS.gene22979.t1;Parent=MS.gene22979.t1
chr7.2 exon 6415316 6415459 6415316 ID=MS.gene22979.t1.exon3;Parent=MS.gene22979.t1
chr7.2 CDS 6415316 6415459 6415316 ID=cds.MS.gene22979.t1;Parent=MS.gene22979.t1
chr7.2 exon 6413552 6414928 6413552 ID=MS.gene22979.t1.exon4;Parent=MS.gene22979.t1
chr7.2 CDS 6413552 6414928 6413552 ID=cds.MS.gene22979.t1;Parent=MS.gene22979.t1
Gene Sequence

>MS.gene22979

ATGTTACGTGAGGTAAAATTCTCTCAACGTCTATTTTTTTATCTATTAAGAATAATTAAATTGGTCCACGTAAACTTACTTGATAATGGATAATCCATACTCCCTCTGGTTTCATTTATAAGCAAATTTTTACTTTTTAGATTCATTCAATAAATGATGTATGTGGTCTACAATATAGACCACATACATCATTTATTGAATGAACCTAAAAGGTCAAAATTTGCTTATAATAGTGACCGAAGGGAGTATGTACGTAAGGGTCGAAGTTCGGCGCCCGGACACTCCAGTTATTAACCTTTAAGGTGAATTTCTCTAGCCGCTAGAGTATAGAATACTAGACAAAAAAAAAACAAATTATAAGTTTACCATACACATTTAATAGAGTCTAGAATTTTAACAGAGTCTAGAATACTAGACAAAAAAAAAATTGTAACACATTTAATTTAGTTTTGATTCATTGGTTAATTTACTCTTTACATACTAAAATAAGTGCCACTTCAGCGCACAAAAATAATCGTTCTAAAATAAATATCATTTTACCTTTTCAATTCAGCATTATTTAATTTTTTTAAATTTTATTTATATATAAGCAGGTGTTTTTCTGATATATACAATTAAATTTTATTTATCTATAAGCAGGTGTTTTTCTGATATATACAACATCGTACATGTTAAAATGCGATAAATGCATTACTTTTTTCAATGTAAATTTTCCTATTAATTACAAATTTATTAAAAAAATCTTATTAAATCATATATTTTTTTTATTAACTTGCTAGATTGGTTGAAAACTTATCTTCAAAAGTTTGATTTACCGCTAGAAAAATAAACATTGAATCCAAATTATGAGCTCGGGCGGTTAGTATATTCGAATCGAGAGGTTTGTAGGTCTAAATCAAAAAAGGGGTTAGGGATCAAGGACCTAAGGCTGGTGAAGCTATGTTGGGTAAATGGATGGGGAGGTTGCTTTCACGAGGGTCGTATATTTGAAATGAGATCCTTTGTGCCCAATATGGGGTTAATCTGGTAGGATCTGGTCGTCGAGGGCTGGGCGGGCCTCTGTGGTATGCCTCTGCATGTGGAAGGGGTCTCCATTCGTAGTACATGTTTGGGTGTTGTGTCCAGTAAAGACTGGCGTTCAATGGGTGTGACTAGGATTGCGAGAGACAACATTCAGACTTACTTTTGGGAGGATGTTTTGGTTGGTGAGGCCCTTTTTAGAGAAAGCTTCCCTAGACTTTTTCAGGTTTCAACCCTAAAATCCTCCTACGTAGGGTCTCCAGGTTTGTGGATGGATGGGAGGTGAGTGTGGTATATGAAGCGGAGAAGAAAATTGTAAGTTTGGGAGCAAGAGCCGGTTGTTCAATTGTTAGGCTTGTTAGAGGAGTGTCATTTCTCGACTAAATTAGACTATTAGGCTTAGATGTTTGGTAAGCAAGGGGTCCTCTATCTTTCTTCCACGTACGAGTACCTGACAAAGACTACCCTAAATGTGGGTGGCAGAGTGTCTACTTTTGATAGTTCCTCGACGTTATTTGAAATAGTCGAACTCCTCCCAAAGTCAAAGTCTTCTCTTGAAAGGTTCTTAAAATAGAATTAAAAATTAAATTTTATATTGAAAAAACAACTTTTGAAACTTTTAAGATATTGAATGCATAATTTTTCAAAATAAATCTTCTATTTTTAGTTTCTTAACTAATGCCCCAAGACACAAGTTAGAAAGAAAAAAAAAAAATTGAAAGAAGGATGCAGCGTTGGACAAGATTGACCGAGTTCAGATCCTCTCCATTTAGAGAGTAAATGGCAATCTCCCTTTCCTTGTATATCCAACTGACATGTGGTTTAAATGAAAATCAATGGCTCAGATTTAAATTGATTTTTTTCATATTAATAAATAATTAAAAAAGGAAATGAAGAGACGTGCGCGGGAAAGGAGTTAGAGTTTCCAGAAATCACTCTTCTTCATCAGTGCAGAGTTCCCAGAAAATCACTCTCCTTCAATTTGCAGTGTTTCCAAAAATCACTCTTCGCAGAGTTGCTAACCTGGAGCACCATCTTTCACTGCAATTTGTCATTCTATCTCACTCCGGCGCTTTCCGCATCGTCGCTTTGGCTCATGTATGCGTCACTTTCCGCATTGTTATTTTGTTATCAATTTGTCCCTCTTTTGATTTTATTATTCATGTTACTATGTTATTTAACATCTAATGTCTTTCATTTTTTACATGTCCCTGTTACTATTGTTGTGCGTCCCTGTTATATACTGATTTTTATTGTTATTTTGTTATCATTTTTTTGAACAATTTTTATTGTTATTTTTGTTATCAATTTGTCCCTGTTTTGATCTTATTATTCTTATTATTCATGTTACTATGTTAATTTGTCCCAGAAAATATGAACGAATCTTCAATTCCATTAGTCGAAGATGTAGAGAATTTAGTGAACAATATCCAAAAAGACATTGTGGAACATGGTACAGAGAGTGATGTTAATTATATACCACAGTTAGAAATGGAGTTTGAATCTGAGATAGCAGCATATGATTTTTATAACGAGTACAGCAAGAAAACCGGGTTTGGTATTCGCCGGGAATATGGAAATAAAAGCAAAAAAGATGGAATTCTGACTTCAAGAAGATTTGTATGCTCCAAAGAGGGTGATCGAGGTGTTGACAAGCGAGATTACTTGACTAAAGAGCCTAGAGCAGAAACAAGAACAGGGTGTACGGCACGTATGTGTATTTCACTTGATCGAAAGATTGGAAAATACAAGGTGGTTGACTTTATTCCTTGGCATAATCACACTCTTCAACCGCAAGAGTTTGTTCACATGATTCGCTCTCATCGACGCATATACGAGTCTCAAGCTATTCAAATTGTGTTAGCTGATGAATCTGGACTGAAACCAAAAGATTTCCATGAATATGTGTCAAGGCAAGTTGGTGGAAAAGAAATGATTGGATATACAAGTCAAGACCATAAGAATTACCTTCGAACCAAAAGATTGCAATCGCTAAAGTATGGTGAAGTGGGTGCATTGCTGATGCATTTCAAACAACAAAGTGAAAATCCTTCATTCTTTTACGAATTTCAAATGGACGTTGAAGAGCAAATAACGAACATATTTTGGGCAGATGCACAGATGATAAATGATTATGGATACTTTGGTGATGTGGTCACTTTTGACACAACATATAAGACAAATAAGGATTATCGACCACTTGGAGTATTTGTTGGTCTTAATAATCACAGGCAGACTGTTGTTTTTGGGGCAACATTGTTATATGATGAAACAATTCCTTCGTTTCAATGGTTATTTGAAACATTTCTCAAAGCAATGAGTGGAAAAAAACCTAAAACAATTCTCACTGGTCAAGCTGCTGCAATGGCTAAGGCTATTTCTTTAACTATGCCAGAAACATTTCATGGATTATGCACTTGGCATATCAGAGAAAATGCTCTAAGACATGTAAATCATCTGTATCAAAGGAGTCCTAAATTCTGCTCAGATTTTGAAGCATGCATCGATTTACATGAAGAGGAAAGTGAGTTTTTGAGTGCATGGGATGGTTTGCTTGTTGAGCATAATGTTCCTGACGATTCTTGGCTGCATACAATTTTTCAAGTGAAGGAAAAATGGGCATGGGCTTATCTTCGAAAAACTTTCACTGCTGGTATGAGATCTACTCAACTAAGTGAAAGCTTTAATGCAGATTTGAAAAATCATTTGAAGTCAGATTTAAATATAGTGCAATTTTTCACTCACTTTGAAAGGGTTGTCAATGGAAAGAGAAGCAATGAGTCTCAAGCTGATTATGAGTCAAGACATAAATTGCCTCGGTTGAAAATGAAGAAGGCCCCCATGCTCGTACTAAAGCAATGA
Protein sequence

>MS.gene22979.t1

MLREDLVVEGWAGLCGMPLHVEGVSIRSTCLGVVSSKDWRSMGVTRIARDNIQTYFWEDVLVGEALFRESFPRLFQSSQKITLLQFAVFPKITLRRVANLEHHLSLQFVILSHSGAFRIVALAHLEMEFESEIAAYDFYNEYSKKTGFGIRREYGNKSKKDGILTSRRFVCSKEGDRGVDKRDYLTKEPRAETRTGCTARMCISLDRKIGKYKVVDFIPWHNHTLQPQEFVHMIRSHRRIYESQAIQIVLADESGLKPKDFHEYVSRQVGGKEMIGYTSQDHKNYLRTKRLQSLKYGEVGALLMHFKQQSENPSFFYEFQMDVEEQITNIFWADAQMINDYGYFGDVVTFDTTYKTNKDYRPLGVFVGLNNHRQTVVFGATLLYDETIPSFQWLFETFLKAMSGKKPKTILTGQAAAMAKAISLTMPETFHGLCTWHIRENALRHVNHLYQRSPKFCSDFEACIDLHEEESEFLSAWDGLLVEHNVPDDSWLHTIFQVKEKWAWAYLRKTFTAGMRSTQLSESFNADLKNHLKSDLNIVQFFTHFERVVNGKRSNESQADYESRHKLPRLKMKKAPMLVLKQ