Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22997.t1 | RHN48923.1 | 98.3 | 459 | 7 | 1 | 45 | 502 | 32 | 490 | 4.60E-260 | 906.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22997.t1 | Q9ZWA6 | 45.4 | 432 | 156 | 12 | 45 | 402 | 51 | 476 | 2.1e-80 | 301.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22997.t1 | A0A396H847 | 98.3 | 459 | 7 | 1 | 45 | 502 | 32 | 490 | 3.3e-260 | 906.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene22997.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22997.t1 | MTR_2g099990 | 56.000 | 300 | 82 | 5 | 45 | 329 | 56 | 320 | 2.97e-107 | 328 |
MS.gene22997.t1 | MTR_8g017210 | 50.263 | 380 | 149 | 9 | 1 | 357 | 18 | 380 | 1.92e-105 | 325 |
MS.gene22997.t1 | MTR_1g112270 | 83.007 | 153 | 26 | 0 | 45 | 197 | 54 | 206 | 7.96e-99 | 309 |
MS.gene22997.t1 | MTR_2g099990 | 54.895 | 286 | 79 | 5 | 59 | 329 | 1 | 251 | 8.42e-99 | 303 |
MS.gene22997.t1 | MTR_1g112270 | 83.553 | 152 | 25 | 0 | 46 | 197 | 66 | 217 | 1.66e-98 | 308 |
MS.gene22997.t1 | MTR_2g090745 | 82.278 | 158 | 28 | 0 | 42 | 199 | 14 | 171 | 2.86e-98 | 303 |
MS.gene22997.t1 | MTR_1g094115 | 82.667 | 150 | 26 | 0 | 45 | 194 | 57 | 206 | 3.89e-97 | 304 |
MS.gene22997.t1 | MTR_1g016010 | 50.641 | 312 | 104 | 6 | 45 | 350 | 51 | 318 | 2.59e-96 | 299 |
MS.gene22997.t1 | MTR_4g059870 | 81.290 | 155 | 28 | 1 | 45 | 198 | 48 | 202 | 7.67e-96 | 299 |
MS.gene22997.t1 | MTR_2g093960 | 78.065 | 155 | 33 | 1 | 45 | 198 | 42 | 196 | 1.47e-92 | 288 |
MS.gene22997.t1 | MTR_1g094115 | 82.576 | 132 | 23 | 0 | 63 | 194 | 58 | 189 | 1.54e-85 | 273 |
MS.gene22997.t1 | MTR_2g017720 | 76.316 | 114 | 22 | 1 | 45 | 158 | 323 | 431 | 6.51e-55 | 190 |
MS.gene22997.t1 | MTR_3g102000 | 66.667 | 99 | 26 | 2 | 62 | 156 | 36 | 131 | 6.86e-39 | 141 |
MS.gene22997.t1 | MTR_5g030560 | 82.222 | 45 | 8 | 0 | 45 | 89 | 16 | 60 | 9.99e-21 | 86.7 |
MS.gene22997.t1 | MTR_1g093095 | 33.537 | 164 | 86 | 7 | 58 | 200 | 109 | 270 | 1.18e-19 | 89.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22997.t1 | AT3G50700 | 55.519 | 308 | 109 | 5 | 45 | 331 | 44 | 344 | 1.06e-106 | 326 |
MS.gene22997.t1 | AT1G03840 | 86.452 | 155 | 21 | 0 | 45 | 199 | 51 | 205 | 7.88e-101 | 312 |
MS.gene22997.t1 | AT1G03840 | 85.806 | 155 | 22 | 0 | 45 | 199 | 49 | 203 | 4.24e-100 | 310 |
MS.gene22997.t1 | AT5G66730 | 70.918 | 196 | 47 | 1 | 2 | 197 | 9 | 194 | 1.95e-99 | 308 |
MS.gene22997.t1 | AT5G44160 | 73.545 | 189 | 42 | 2 | 45 | 225 | 8 | 196 | 6.59e-99 | 305 |
MS.gene22997.t1 | AT5G44160 | 73.545 | 189 | 42 | 2 | 45 | 225 | 47 | 235 | 1.31e-98 | 305 |
MS.gene22997.t1 | AT1G55110 | 69.608 | 204 | 56 | 3 | 1 | 198 | 24 | 227 | 1.43e-98 | 305 |
MS.gene22997.t1 | AT1G55110 | 69.608 | 204 | 56 | 3 | 1 | 198 | 24 | 227 | 1.43e-98 | 305 |
MS.gene22997.t1 | AT1G55110 | 69.608 | 204 | 56 | 3 | 1 | 198 | 24 | 227 | 1.43e-98 | 305 |
MS.gene22997.t1 | AT1G14580 | 82.353 | 153 | 27 | 0 | 45 | 197 | 63 | 215 | 8.09e-98 | 303 |
MS.gene22997.t1 | AT1G14580 | 82.353 | 153 | 27 | 0 | 45 | 197 | 63 | 215 | 8.09e-98 | 303 |
MS.gene22997.t1 | AT1G14580 | 82.353 | 153 | 27 | 0 | 45 | 197 | 77 | 229 | 1.05e-97 | 303 |
MS.gene22997.t1 | AT2G02070 | 82.166 | 157 | 28 | 0 | 48 | 204 | 65 | 221 | 1.28e-97 | 307 |
MS.gene22997.t1 | AT2G02070 | 82.166 | 157 | 28 | 0 | 48 | 204 | 65 | 221 | 1.28e-97 | 307 |
MS.gene22997.t1 | AT2G02080 | 81.699 | 153 | 28 | 0 | 45 | 197 | 64 | 216 | 2.20e-97 | 304 |
MS.gene22997.t1 | AT2G02080 | 81.699 | 153 | 28 | 0 | 45 | 197 | 64 | 216 | 2.20e-97 | 304 |
MS.gene22997.t1 | AT2G02080 | 81.699 | 153 | 28 | 0 | 45 | 197 | 64 | 216 | 2.20e-97 | 304 |
MS.gene22997.t1 | AT2G02080 | 81.699 | 153 | 28 | 0 | 45 | 197 | 64 | 216 | 2.20e-97 | 304 |
MS.gene22997.t1 | AT5G03150 | 84.516 | 155 | 23 | 1 | 45 | 198 | 63 | 217 | 4.59e-97 | 303 |
MS.gene22997.t1 | AT3G45260 | 82.468 | 154 | 26 | 1 | 45 | 197 | 49 | 202 | 9.38e-96 | 297 |
MS.gene22997.t1 | AT3G45260 | 82.468 | 154 | 26 | 1 | 45 | 197 | 49 | 202 | 9.38e-96 | 297 |
MS.gene22997.t1 | AT3G13810 | 65.138 | 218 | 48 | 3 | 1 | 197 | 4 | 214 | 3.39e-95 | 297 |
MS.gene22997.t1 | AT3G13810 | 65.138 | 218 | 48 | 3 | 1 | 197 | 18 | 228 | 5.03e-95 | 297 |
MS.gene22997.t1 | AT3G13810 | 65.138 | 218 | 48 | 3 | 1 | 197 | 23 | 233 | 7.40e-95 | 297 |
MS.gene22997.t1 | AT3G13810 | 65.138 | 218 | 48 | 3 | 1 | 197 | 23 | 233 | 7.40e-95 | 297 |
MS.gene22997.t1 | AT3G13810 | 84.314 | 153 | 23 | 1 | 46 | 197 | 68 | 220 | 4.82e-94 | 295 |
MS.gene22997.t1 | AT4G02670 | 65.297 | 219 | 59 | 4 | 8 | 211 | 17 | 233 | 4.95e-94 | 291 |
MS.gene22997.t1 | AT4G02670 | 65.297 | 219 | 59 | 4 | 8 | 211 | 19 | 235 | 5.49e-94 | 291 |
MS.gene22997.t1 | AT3G13810 | 84.314 | 153 | 23 | 1 | 46 | 197 | 82 | 234 | 7.13e-94 | 295 |
MS.gene22997.t1 | AT5G60470 | 78.065 | 155 | 33 | 1 | 45 | 198 | 50 | 204 | 8.74e-92 | 287 |
MS.gene22997.t1 | AT5G60470 | 78.065 | 155 | 33 | 1 | 45 | 198 | 54 | 208 | 9.01e-92 | 287 |
MS.gene22997.t1 | AT5G60470 | 78.431 | 153 | 32 | 1 | 46 | 197 | 46 | 198 | 2.38e-91 | 286 |
MS.gene22997.t1 | AT2G02080 | 82.014 | 139 | 25 | 0 | 59 | 197 | 1 | 139 | 1.23e-89 | 281 |
MS.gene22997.t1 | AT2G02080 | 82.014 | 139 | 25 | 0 | 59 | 197 | 1 | 139 | 1.23e-89 | 281 |
MS.gene22997.t1 | AT1G68130 | 67.808 | 146 | 45 | 2 | 45 | 188 | 51 | 196 | 1.40e-69 | 228 |
MS.gene22997.t1 | AT2G01940 | 66.892 | 148 | 47 | 2 | 45 | 190 | 54 | 201 | 3.40e-69 | 228 |
MS.gene22997.t1 | AT1G25250 | 64.865 | 148 | 49 | 2 | 44 | 188 | 19 | 166 | 3.25e-68 | 223 |
MS.gene22997.t1 | AT1G25250 | 63.226 | 155 | 51 | 3 | 37 | 188 | 38 | 189 | 3.84e-68 | 224 |
MS.gene22997.t1 | AT2G01940 | 65.772 | 149 | 48 | 3 | 45 | 190 | 54 | 202 | 2.71e-65 | 218 |
MS.gene22997.t1 | AT1G68130 | 65.455 | 110 | 36 | 2 | 81 | 188 | 1 | 110 | 1.01e-46 | 166 |
MS.gene22997.t1 | AT2G01940 | 65.179 | 112 | 37 | 2 | 81 | 190 | 1 | 112 | 1.29e-46 | 166 |
MS.gene22997.t1 | AT1G25250 | 62.162 | 111 | 39 | 2 | 81 | 188 | 1 | 111 | 4.54e-45 | 160 |
MS.gene22997.t1 | AT5G22890 | 34.000 | 150 | 85 | 3 | 49 | 184 | 202 | 351 | 3.00e-23 | 101 |
MS.gene22997.t1 | AT1G34370 | 33.333 | 153 | 88 | 3 | 49 | 187 | 19 | 171 | 3.09e-23 | 100 |
MS.gene22997.t1 | AT1G34370 | 33.333 | 153 | 88 | 3 | 49 | 187 | 229 | 381 | 6.90e-23 | 102 |
MS.gene22997.t1 | AT1G34370 | 33.333 | 153 | 88 | 3 | 49 | 187 | 229 | 381 | 6.90e-23 | 102 |
MS.gene22997.t1 | AT3G20880 | 37.143 | 140 | 76 | 6 | 58 | 187 | 250 | 387 | 5.45e-20 | 92.4 |
MS.gene22997.t1 | AT1G51220 | 33.775 | 151 | 84 | 5 | 46 | 187 | 166 | 309 | 1.19e-19 | 90.5 |
MS.gene22997.t1 | AT3G57670 | 34.437 | 151 | 83 | 5 | 46 | 187 | 205 | 348 | 4.01e-19 | 89.7 |
MS.gene22997.t1 | AT1G13290 | 35.862 | 145 | 79 | 7 | 58 | 190 | 95 | 237 | 5.60e-19 | 87.8 |
MS.gene22997.t1 | AT1G08290 | 35.294 | 136 | 75 | 5 | 63 | 187 | 179 | 312 | 1.88e-17 | 84.0 |
MS.gene22997.t1 | AT1G34790 | 33.333 | 150 | 88 | 6 | 48 | 187 | 129 | 276 | 1.13e-16 | 81.3 |
Find 106 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTAGTCCTAATCATGTTTC+TGG | 0.126378 | 7.2:+6594663 | MS.gene22997:CDS |
ATTATCTCCAACAACATTAA+TGG | 0.225501 | 7.2:+6593406 | MS.gene22997:CDS |
CCGCAATGGAGAAATCAATT+TGG | 0.246894 | 7.2:+6595099 | MS.gene22997:CDS |
ATTGAAATGTCAAATATTTC+AGG | 0.250060 | 7.2:+6592392 | None:intergenic |
TGCATTTGGCTTTGCAAGTT+TGG | 0.264117 | 7.2:-6594243 | None:intergenic |
ATTGCTGTACCTAGAAAATA+TGG | 0.277676 | 7.2:-6593768 | None:intergenic |
GTCCATGATTTCTTGGGAAT+TGG | 0.293303 | 7.2:+6594966 | MS.gene22997:CDS |
GGCAACAGTCCATGATTTCT+TGG | 0.325473 | 7.2:+6594959 | MS.gene22997:CDS |
TTGGAGCATGTTCTTGAGTT+GGG | 0.332417 | 7.2:-6594356 | None:intergenic |
GTAATTGAAGCTGTTGGAAT+TGG | 0.337918 | 7.2:-6594493 | None:intergenic |
CGCAATGGAGAAATCAATTT+GGG | 0.339260 | 7.2:+6595100 | MS.gene22997:CDS |
TCTACAATGAATAATGATAT+TGG | 0.357969 | 7.2:+6594858 | MS.gene22997:CDS |
TTTAGAGGCATGGTAGAGAT+AGG | 0.380908 | 7.2:-6594270 | None:intergenic |
TTTGTTGCCATTAATGTTGT+TGG | 0.382808 | 7.2:-6593413 | None:intergenic |
TCTGAGGAAGTGTTGGAAAC+AGG | 0.383083 | 7.2:-6594294 | None:intergenic |
GTTCATAAGAGGGTTGGTTT+TGG | 0.388862 | 7.2:-6594707 | None:intergenic |
GCAAACATGGTGAGAAGAAA+TGG | 0.396336 | 7.2:+6593648 | MS.gene22997:CDS |
CGTGCATTAGGTGACCTTAC+TGG | 0.399967 | 7.2:+6593605 | MS.gene22997:CDS |
TTCGATGTAACTGAAGATTC+TGG | 0.401666 | 7.2:-6593478 | None:intergenic |
AGTGGAACCATTGCTATTGC+AGG | 0.405406 | 7.2:-6592516 | None:intergenic |
CACAATCCAGCTCGTGCATT+AGG | 0.407149 | 7.2:+6593593 | MS.gene22997:CDS |
AATCTCAATGACTCAAGTTC+AGG | 0.409366 | 7.2:+6592482 | MS.gene22997:CDS |
GCATGCCACTGGTTAATCCT+TGG | 0.413966 | 7.2:-6594218 | None:intergenic |
ATTTCTTCTCACCATGTTTG+CGG | 0.414358 | 7.2:-6593646 | None:intergenic |
TAGAGATAGGATCATGCATT+TGG | 0.417757 | 7.2:-6594257 | None:intergenic |
TGGATTAAAGTGTTCATAAG+AGG | 0.422907 | 7.2:-6594718 | None:intergenic |
TGAACCACAGCAACAAAGAT+TGG | 0.429733 | 7.2:+6595010 | MS.gene22997:CDS |
GATATGCTGTTCAATCTGAT+TGG | 0.431168 | 7.2:+6593693 | MS.gene22997:CDS |
ACCAGAAAACATGTGGTACT+AGG | 0.442303 | 7.2:+6593723 | MS.gene22997:CDS |
GACTCAAGTTCAGGTCCATC+TGG | 0.442408 | 7.2:+6592491 | MS.gene22997:CDS |
CATGATTTCTTGGGAATTGG+AGG | 0.445123 | 7.2:+6594969 | MS.gene22997:CDS |
ATGCAGAAAAGCTTTGTTAG+TGG | 0.448702 | 7.2:+6594636 | MS.gene22997:CDS |
GCAACAGTCCATGATTTCTT+GGG | 0.459975 | 7.2:+6594960 | MS.gene22997:CDS |
CATGCCACCACATGCATTGT+TGG | 0.462483 | 7.2:-6594394 | None:intergenic |
CTCCAATTCCCAAGAAATCA+TGG | 0.464360 | 7.2:-6594968 | None:intergenic |
AGTTGAAGGGTTGAAGAAGA+TGG | 0.465582 | 7.2:-6594465 | None:intergenic |
TCAAATATTTCAGGTGATGA+AGG | 0.466760 | 7.2:+6592401 | MS.gene22997:CDS |
ATAGAACCAGAAACATGATT+AGG | 0.468762 | 7.2:-6594669 | None:intergenic |
GGTGCTACTGCAAGCAATAG+TGG | 0.468938 | 7.2:+6594600 | MS.gene22997:CDS |
TCTAACATGGCTGGTGTTAG+TGG | 0.470215 | 7.2:+6594756 | MS.gene22997:CDS |
TGGAATTGGAACTAAGTTGA+AGG | 0.481061 | 7.2:-6594479 | None:intergenic |
GTTGGAGCATGTTCTTGAGT+TGG | 0.484302 | 7.2:-6594357 | None:intergenic |
GATATTGGAATGTTTAGTCA+TGG | 0.486932 | 7.2:+6594873 | MS.gene22997:CDS |
GCTTCCAATCTTTGTTGCTG+TGG | 0.487682 | 7.2:-6595014 | None:intergenic |
AATTGTTCAAATTTGATACA+TGG | 0.491018 | 7.2:+6594927 | MS.gene22997:CDS |
AGCATTAAGTCAACAGAGGT+TGG | 0.491230 | 7.2:+6595034 | MS.gene22997:CDS |
GTTTAATTCTGAGGAAGTGT+TGG | 0.503695 | 7.2:-6594301 | None:intergenic |
CAAGTTTGGTGGCATGCCAC+TGG | 0.504812 | 7.2:-6594229 | None:intergenic |
ACAATCTTCCATGGAAACTT+AGG | 0.513491 | 7.2:+6593507 | MS.gene22997:CDS |
TAAAGTGTTCATAAGAGGGT+TGG | 0.514305 | 7.2:-6594713 | None:intergenic |
GATGAAGAATGTTGCACAAG+AGG | 0.514880 | 7.2:+6594899 | MS.gene22997:CDS |
TTGGTTGATCTGAATGATGT+TGG | 0.518626 | 7.2:-6594375 | None:intergenic |
GTTCTTTGCCTAAGTTTCCA+TGG | 0.520812 | 7.2:-6593515 | None:intergenic |
ATTGAAGTAATTGAAGCTGT+TGG | 0.522656 | 7.2:-6594499 | None:intergenic |
TGGAGGACTAATTGCTGGCA+TGG | 0.527954 | 7.2:+6594533 | MS.gene22997:CDS |
CCAGAAAACATGTGGTACTA+GGG | 0.530598 | 7.2:+6593724 | MS.gene22997:CDS |
ATTTGGCTTTGCAAGTTTGG+TGG | 0.531585 | 7.2:-6594240 | None:intergenic |
AGCTTCTCCTCAGGAAACAA+TGG | 0.532782 | 7.2:+6592425 | MS.gene22997:CDS |
TGGTGAACACATGATGGCTC+AGG | 0.534078 | 7.2:-6593572 | None:intergenic |
TGCTGTTCAATCTGATTGGA+AGG | 0.534743 | 7.2:+6593697 | MS.gene22997:CDS |
TTCTTCTCCATTGTTTCCTG+AGG | 0.534803 | 7.2:-6592432 | None:intergenic |
ATAGTCATTGTTTAATTCTG+AGG | 0.543313 | 7.2:-6594310 | None:intergenic |
GAAAAGCTTTGTTAGTGGCA+TGG | 0.546409 | 7.2:+6594641 | MS.gene22997:CDS |
GATGAAGGAAGCTTCTCCTC+AGG | 0.547390 | 7.2:+6592416 | MS.gene22997:CDS |
GGTTGAAGAAGATGGAGGCA+AGG | 0.548129 | 7.2:-6594457 | None:intergenic |
ATGGCTGGTGTTAGTGGTGG+AGG | 0.549455 | 7.2:+6594762 | MS.gene22997:CDS |
TGCTGGCATGGCTCAAATGT+CGG | 0.549729 | 7.2:+6594545 | MS.gene22997:CDS |
AGGTCACCTAATGCACGAGC+TGG | 0.556111 | 7.2:-6593599 | None:intergenic |
GGCATGTTCTCAACTAGTGC+AGG | 0.558296 | 7.2:+6594411 | MS.gene22997:CDS |
TCATCATCATCTTCCACATG+AGG | 0.560330 | 7.2:+6595073 | MS.gene22997:CDS |
TGGAGCATGTTCTTGAGTTG+GGG | 0.560364 | 7.2:-6594355 | None:intergenic |
CCAAATTGATTTCTCCATTG+CGG | 0.563419 | 7.2:-6595099 | None:intergenic |
CATGAATTATCTAACATGGC+TGG | 0.563778 | 7.2:+6594747 | MS.gene22997:CDS |
TTGCTATTGCAGGCACCAGA+TGG | 0.567581 | 7.2:-6592506 | None:intergenic |
GAAGAGGTCACAATCTTCCA+TGG | 0.567686 | 7.2:+6593498 | MS.gene22997:CDS |
GGATTAAAGTGTTCATAAGA+GGG | 0.569779 | 7.2:-6594717 | None:intergenic |
TGCATCACAGAATGCTCTGT+GGG | 0.579430 | 7.2:-6594169 | None:intergenic |
AACAGATCCTACTGCTGAAG+TGG | 0.587709 | 7.2:+6593379 | MS.gene22997:intron |
AGGGAATACAAATGTGATTG+TGG | 0.590905 | 7.2:+6593743 | MS.gene22997:CDS |
GTGCTACTGCAAGCAATAGT+GGG | 0.592488 | 7.2:+6594601 | MS.gene22997:CDS |
TTAGATAATTCATGCTGCAG+TGG | 0.592945 | 7.2:-6594738 | None:intergenic |
GGAATTGGAACTAAGTTGAA+GGG | 0.596686 | 7.2:-6594478 | None:intergenic |
AATGCAACCACTTCAGCAGT+AGG | 0.598028 | 7.2:-6593386 | None:intergenic |
TGAAGGGTTGAAGAAGATGG+AGG | 0.598478 | 7.2:-6594462 | None:intergenic |
AGAAGTTAGTAAGCAGCAAG+AGG | 0.608407 | 7.2:+6592451 | MS.gene22997:CDS |
TCCATTGCGGAATCCTCATG+TGG | 0.616798 | 7.2:-6595086 | None:intergenic |
TATGCAACAAAGGATTTCAG+AGG | 0.622063 | 7.2:+6593453 | MS.gene22997:CDS |
CTAATGCACGAGCTGGATTG+TGG | 0.622870 | 7.2:-6593592 | None:intergenic |
TCTGGTGCCTGCAATAGCAA+TGG | 0.623066 | 7.2:+6592509 | MS.gene22997:CDS |
AATCTTCAGTTACATCGAAG+AGG | 0.634133 | 7.2:+6593482 | MS.gene22997:CDS |
TCCACATGAGGATTCCGCAA+TGG | 0.634855 | 7.2:+6595085 | MS.gene22997:CDS |
AACATGGCTGGTGTTAGTGG+TGG | 0.642397 | 7.2:+6594759 | MS.gene22997:CDS |
TCAACCAACAATGCATGTGG+TGG | 0.656711 | 7.2:+6594390 | MS.gene22997:CDS |
GGATTGTGGTGAACACATGA+TGG | 0.659836 | 7.2:-6593578 | None:intergenic |
ATGCAACAAAGGATTTCAGA+GGG | 0.660958 | 7.2:+6593454 | MS.gene22997:CDS |
AGATCAACCAACAATGCATG+TGG | 0.667821 | 7.2:+6594387 | MS.gene22997:CDS |
GCAGCATGAATTATCTAACA+TGG | 0.668171 | 7.2:+6594743 | MS.gene22997:CDS |
TGGAAGCATTAAGTCAACAG+AGG | 0.675968 | 7.2:+6595030 | MS.gene22997:CDS |
GTGTGTGAGATATGCAACAA+AGG | 0.682268 | 7.2:+6593443 | MS.gene22997:CDS |
TTTGATACATGGAAGTGATG+TGG | 0.683521 | 7.2:+6594938 | MS.gene22997:CDS |
ATGCATCACAGAATGCTCTG+TGG | 0.684328 | 7.2:-6594170 | None:intergenic |
TAGGCAAAGAACAAGTGCAG+AGG | 0.701077 | 7.2:+6593526 | MS.gene22997:CDS |
GAAAACAACAGAGTAAACCA+AGG | 0.707069 | 7.2:+6594201 | MS.gene22997:CDS |
AAGGCTCACCAGAAAACATG+TGG | 0.716558 | 7.2:+6593716 | MS.gene22997:CDS |
GTAAACCAAGGATTAACCAG+TGG | 0.716826 | 7.2:+6594213 | MS.gene22997:CDS |
GGTGAACACATGATGGCTCA+GGG | 0.717782 | 7.2:-6593571 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATAATAATTTGCATAAT+TGG | + | chr7.2:6593962-6593981 | MS.gene22997:intron | 10.0% |
!! | AAAAAAACTTATAGCTTATA+TGG | - | chr7.2:6592958-6592977 | None:intergenic | 15.0% |
!!! | AAAATATGTTTTCCATTTTT+AGG | - | chr7.2:6593906-6593925 | None:intergenic | 15.0% |
!!! | ATTTTATATAGTTTCTCTAA+TGG | + | chr7.2:6592820-6592839 | MS.gene22997:intron | 15.0% |
!! | AAAATACATCATCCATTAAT+CGG | - | chr7.2:6593355-6593374 | None:intergenic | 20.0% |
!! | AATTGTTCAAATTTGATACA+TGG | + | chr7.2:6594927-6594946 | MS.gene22997:CDS | 20.0% |
!! | GCTAGTAACTTATAAAATAA+AGG | - | chr7.2:6593302-6593321 | None:intergenic | 20.0% |
!! | TACTTCAATGACAATAAAAA+TGG | + | chr7.2:6594513-6594532 | MS.gene22997:CDS | 20.0% |
!! | TCTACAATGAATAATGATAT+TGG | + | chr7.2:6594858-6594877 | MS.gene22997:CDS | 20.0% |
!! | TTATTACTACTTAAAGATGA+AGG | - | chr7.2:6593133-6593152 | None:intergenic | 20.0% |
!! | TTCAAATAAGTCAATTTAAG+CGG | + | chr7.2:6593096-6593115 | MS.gene22997:intron | 20.0% |
!!! | TAATATTTAGAATGCATGTT+TGG | - | chr7.2:6594084-6594103 | None:intergenic | 20.0% |
!!! | TTTCTTTTTAATTACCTCAT+TGG | - | chr7.2:6593188-6593207 | None:intergenic | 20.0% |
! | AATAAGCTGAAAACATCTTA+TGG | + | chr7.2:6593006-6593025 | MS.gene22997:intron | 25.0% |
! | AATTGGATTGAAATCGAATT+TGG | + | chr7.2:6593979-6593998 | MS.gene22997:intron | 25.0% |
! | ATAGTCATTGTTTAATTCTG+AGG | - | chr7.2:6594313-6594332 | None:intergenic | 25.0% |
! | ATTATCTCCAACAACATTAA+TGG | + | chr7.2:6593406-6593425 | MS.gene22997:CDS | 25.0% |
! | CTGCAATAAAAATTGAAGTT+AGG | - | chr7.2:6592607-6592626 | None:intergenic | 25.0% |
! | GCATATTATTGTTATGCATA+TGG | + | chr7.2:6593320-6593339 | MS.gene22997:intron | 25.0% |
! | TACATAGCACTTCTTAAAAA+AGG | - | chr7.2:6593275-6593294 | None:intergenic | 25.0% |
! | TCTAGGCAAATAAAAATCTT+TGG | + | chr7.2:6592667-6592686 | MS.gene22997:intron | 25.0% |
! | TGAAACAAAGTGAATACAAT+AGG | + | chr7.2:6593880-6593899 | MS.gene22997:intron | 25.0% |
! | TTCAATGACAATAAAAATGG+AGG | + | chr7.2:6594516-6594535 | MS.gene22997:CDS | 25.0% |
!!! | GTTGTTCTTTTTGAAACAAT+TGG | - | chr7.2:6594800-6594819 | None:intergenic | 25.0% |
!!! | TGTTACAAATATTTTTGTGC+AGG | + | chr7.2:6593830-6593849 | MS.gene22997:intron | 25.0% |
AAATACTACTTCACAAGAGT+AGG | - | chr7.2:6593236-6593255 | None:intergenic | 30.0% | |
AATACTACTTCACAAGAGTA+GGG | - | chr7.2:6593235-6593254 | None:intergenic | 30.0% | |
AGTATAGTTGAATATTTGCC+TGG | - | chr7.2:6592584-6592603 | None:intergenic | 30.0% | |
ATAGAACCAGAAACATGATT+AGG | - | chr7.2:6594672-6594691 | None:intergenic | 30.0% | |
ATTGAAGTAATTGAAGCTGT+TGG | - | chr7.2:6594502-6594521 | None:intergenic | 30.0% | |
ATTGCTGTACCTAGAAAATA+TGG | - | chr7.2:6593771-6593790 | None:intergenic | 30.0% | |
CCTGTGTTATACAGAAAAAT+AGG | - | chr7.2:6594133-6594152 | None:intergenic | 30.0% | |
GAATACAATAGGCCTAAAAA+TGG | + | chr7.2:6593891-6593910 | MS.gene22997:intron | 30.0% | |
GATATTGGAATGTTTAGTCA+TGG | + | chr7.2:6594873-6594892 | MS.gene22997:CDS | 30.0% | |
TATACTCCTAACTATACTCT+AGG | + | chr7.2:6592650-6592669 | MS.gene22997:intron | 30.0% | |
TATTTGCCTAGAGTATAGTT+AGG | - | chr7.2:6592659-6592678 | None:intergenic | 30.0% | |
TTATTGTTATGCATATGGCA+AGG | + | chr7.2:6593325-6593344 | MS.gene22997:intron | 30.0% | |
TTTGGATGAACAGCTTAATT+AGG | + | chr7.2:6592890-6592909 | MS.gene22997:intron | 30.0% | |
TTTGTTGCCATTAATGTTGT+TGG | - | chr7.2:6593416-6593435 | None:intergenic | 30.0% | |
! | ACTTAAAGATGAAGGTCTTT+TGG | - | chr7.2:6593125-6593144 | None:intergenic | 30.0% |
! | ATTGTGGAACCATATTTTCT+AGG | + | chr7.2:6593759-6593778 | MS.gene22997:CDS | 30.0% |
! | CTTAAAGATGAAGGTCTTTT+GGG | - | chr7.2:6593124-6593143 | None:intergenic | 30.0% |
! | GGATTAAAGTGTTCATAAGA+GGG | - | chr7.2:6594720-6594739 | None:intergenic | 30.0% |
! | TCAAATATTTCAGGTGATGA+AGG | + | chr7.2:6592401-6592420 | MS.gene22997:CDS | 30.0% |
! | TGGATTAAAGTGTTCATAAG+AGG | - | chr7.2:6594721-6594740 | None:intergenic | 30.0% |
! | TTAAAGATGAAGGTCTTTTG+GGG | - | chr7.2:6593123-6593142 | None:intergenic | 30.0% |
!! | CCTATTTTTCTGTATAACAC+AGG | + | chr7.2:6594130-6594149 | MS.gene22997:intron | 30.0% |
!!! | AATGTTTTTTGATGCCAGTA+AGG | - | chr7.2:6593622-6593641 | None:intergenic | 30.0% |
!!! | CTCTAAATGCTTTTTTTGAG+AGG | + | chr7.2:6592752-6592771 | MS.gene22997:intron | 30.0% |
!!! | CTTATTTTGCTGTTGATTAG+TGG | - | chr7.2:6592537-6592556 | None:intergenic | 30.0% |
AAAAATGGAGGACTAATTGC+TGG | + | chr7.2:6594528-6594547 | MS.gene22997:CDS | 35.0% | |
AACATTCAAGCTATCCAATG+AGG | + | chr7.2:6593171-6593190 | MS.gene22997:intron | 35.0% | |
AAGAAGAAAAGAAACCTTCC+TGG | + | chr7.2:6592554-6592573 | MS.gene22997:intron | 35.0% | |
AATCTCAATGACTCAAGTTC+AGG | + | chr7.2:6592482-6592501 | MS.gene22997:CDS | 35.0% | |
AATCTTCAGTTACATCGAAG+AGG | + | chr7.2:6593482-6593501 | MS.gene22997:CDS | 35.0% | |
ACAATCTTCCATGGAAACTT+AGG | + | chr7.2:6593507-6593526 | MS.gene22997:CDS | 35.0% | |
ACTAATCAACACTTCAGTGA+TGG | + | chr7.2:6592690-6592709 | MS.gene22997:intron | 35.0% | |
ACTACAAAAAGCAGCACAAA+TGG | + | chr7.2:6594578-6594597 | MS.gene22997:CDS | 35.0% | |
AGGGAATACAAATGTGATTG+TGG | + | chr7.2:6593743-6593762 | MS.gene22997:CDS | 35.0% | |
AGTCTCACACATACTTATGT+TGG | + | chr7.2:6593065-6593084 | MS.gene22997:intron | 35.0% | |
ATGCAACAAAGGATTTCAGA+GGG | + | chr7.2:6593454-6593473 | MS.gene22997:CDS | 35.0% | |
ATTTCTTCTCACCATGTTTG+CGG | - | chr7.2:6593649-6593668 | None:intergenic | 35.0% | |
CATGAATTATCTAACATGGC+TGG | + | chr7.2:6594747-6594766 | MS.gene22997:CDS | 35.0% | |
CATTGGATAGCTTGAATGTT+GGG | - | chr7.2:6593171-6593190 | None:intergenic | 35.0% | |
CGCAATGGAGAAATCAATTT+GGG | + | chr7.2:6595100-6595119 | MS.gene22997:CDS | 35.0% | |
CTACAAAAAGCAGCACAAAT+GGG | + | chr7.2:6594579-6594598 | MS.gene22997:CDS | 35.0% | |
GAAAACAACAGAGTAAACCA+AGG | + | chr7.2:6594201-6594220 | MS.gene22997:CDS | 35.0% | |
GATATGCTGTTCAATCTGAT+TGG | + | chr7.2:6593693-6593712 | MS.gene22997:CDS | 35.0% | |
GCAGCATGAATTATCTAACA+TGG | + | chr7.2:6594743-6594762 | MS.gene22997:CDS | 35.0% | |
GCTTAAACAATAGCCATGTT+TGG | + | chr7.2:6592872-6592891 | MS.gene22997:intron | 35.0% | |
GTAATTGAAGCTGTTGGAAT+TGG | - | chr7.2:6594496-6594515 | None:intergenic | 35.0% | |
GTTAGTCCTAATCATGTTTC+TGG | + | chr7.2:6594663-6594682 | MS.gene22997:CDS | 35.0% | |
TAGAGATAGGATCATGCATT+TGG | - | chr7.2:6594260-6594279 | None:intergenic | 35.0% | |
TATGCAACAAAGGATTTCAG+AGG | + | chr7.2:6593453-6593472 | MS.gene22997:CDS | 35.0% | |
TCATTGGATAGCTTGAATGT+TGG | - | chr7.2:6593172-6593191 | None:intergenic | 35.0% | |
TTAAGCTGTTCATCCAAACA+TGG | - | chr7.2:6592888-6592907 | None:intergenic | 35.0% | |
TTAGATAATTCATGCTGCAG+TGG | - | chr7.2:6594741-6594760 | None:intergenic | 35.0% | |
TTCGATGTAACTGAAGATTC+TGG | - | chr7.2:6593481-6593500 | None:intergenic | 35.0% | |
TTCTCTAATGGTCAAACTCT+TGG | + | chr7.2:6592832-6592851 | MS.gene22997:intron | 35.0% | |
TTGGTTGATCTGAATGATGT+TGG | - | chr7.2:6594378-6594397 | None:intergenic | 35.0% | |
TTTGATACATGGAAGTGATG+TGG | + | chr7.2:6594938-6594957 | MS.gene22997:CDS | 35.0% | |
! | AACAAAGCTTTTCTGCATCA+TGG | - | chr7.2:6594634-6594653 | None:intergenic | 35.0% |
! | AGAATGCATGTTTGGAATCA+GGG | - | chr7.2:6594076-6594095 | None:intergenic | 35.0% |
! | CCAAATTGATTTCTCCATTG+CGG | - | chr7.2:6595102-6595121 | None:intergenic | 35.0% |
! | GGAATTGGAACTAAGTTGAA+GGG | - | chr7.2:6594481-6594500 | None:intergenic | 35.0% |
! | GGGATCTTAGTGAGTTTTTA+GGG | - | chr7.2:6594338-6594357 | None:intergenic | 35.0% |
! | GTTTAATTCTGAGGAAGTGT+TGG | - | chr7.2:6594304-6594323 | None:intergenic | 35.0% |
! | TAAAGTGTTCATAAGAGGGT+TGG | - | chr7.2:6594716-6594735 | None:intergenic | 35.0% |
! | TAGAATGCATGTTTGGAATC+AGG | - | chr7.2:6594077-6594096 | None:intergenic | 35.0% |
! | TGGAATTGGAACTAAGTTGA+AGG | - | chr7.2:6594482-6594501 | None:intergenic | 35.0% |
!! | AAACATTTTAGCCGCAAACA+TGG | + | chr7.2:6593635-6593654 | MS.gene22997:CDS | 35.0% |
!! | ATGCAGAAAAGCTTTGTTAG+TGG | + | chr7.2:6594636-6594655 | MS.gene22997:CDS | 35.0% |
!!! | TGCTGCTTTTTGTAGTAAAG+CGG | - | chr7.2:6594574-6594593 | None:intergenic | 35.0% |
!!! | TTTTCCGCCTTATTTTCACA+CGG | + | chr7.2:6593802-6593821 | MS.gene22997:intron | 35.0% |
ACCAGAAAACATGTGGTACT+AGG | + | chr7.2:6593723-6593742 | MS.gene22997:CDS | 40.0% | |
AGAAGTTAGTAAGCAGCAAG+AGG | + | chr7.2:6592451-6592470 | MS.gene22997:CDS | 40.0% | |
AGATCAACCAACAATGCATG+TGG | + | chr7.2:6594387-6594406 | MS.gene22997:CDS | 40.0% | |
AGCATTAAGTCAACAGAGGT+TGG | + | chr7.2:6595034-6595053 | MS.gene22997:CDS | 40.0% | |
AGTTGAAGGGTTGAAGAAGA+TGG | - | chr7.2:6594468-6594487 | None:intergenic | 40.0% | |
CAAATCGCCGTGTGAAAATA+AGG | - | chr7.2:6593812-6593831 | None:intergenic | 40.0% | |
CATGATTTCTTGGGAATTGG+AGG | + | chr7.2:6594969-6594988 | MS.gene22997:CDS | 40.0% | |
CCAGAAAACATGTGGTACTA+GGG | + | chr7.2:6593724-6593743 | MS.gene22997:CDS | 40.0% | |
CCGCAATGGAGAAATCAATT+TGG | + | chr7.2:6595099-6595118 | MS.gene22997:CDS | 40.0% | |
CTCCAATTCCCAAGAAATCA+TGG | - | chr7.2:6594971-6594990 | None:intergenic | 40.0% | |
GATGAAGAATGTTGCACAAG+AGG | + | chr7.2:6594899-6594918 | MS.gene22997:CDS | 40.0% | |
GCAAACATGGTGAGAAGAAA+TGG | + | chr7.2:6593648-6593667 | MS.gene22997:CDS | 40.0% | |
GCAACAGTCCATGATTTCTT+GGG | + | chr7.2:6594960-6594979 | MS.gene22997:CDS | 40.0% | |
GTAAACCAAGGATTAACCAG+TGG | + | chr7.2:6594213-6594232 | MS.gene22997:CDS | 40.0% | |
GTCCATGATTTCTTGGGAAT+TGG | + | chr7.2:6594966-6594985 | MS.gene22997:CDS | 40.0% | |
GTGTGTGAGATATGCAACAA+AGG | + | chr7.2:6593443-6593462 | MS.gene22997:CDS | 40.0% | |
GTTCTTTGCCTAAGTTTCCA+TGG | - | chr7.2:6593518-6593537 | None:intergenic | 40.0% | |
TCATCATCATCTTCCACATG+AGG | + | chr7.2:6595073-6595092 | MS.gene22997:CDS | 40.0% | |
TGAACCACAGCAACAAAGAT+TGG | + | chr7.2:6595010-6595029 | MS.gene22997:CDS | 40.0% | |
TGCTGTTCAATCTGATTGGA+AGG | + | chr7.2:6593697-6593716 | MS.gene22997:CDS | 40.0% | |
TTCTTCTCCATTGTTTCCTG+AGG | - | chr7.2:6592435-6592454 | None:intergenic | 40.0% | |
TTGGAGCATGTTCTTGAGTT+GGG | - | chr7.2:6594359-6594378 | None:intergenic | 40.0% | |
! | AAGATGGAGGCAAGGTTTTT+GGG | - | chr7.2:6594452-6594471 | None:intergenic | 40.0% |
! | GGGGATCTTAGTGAGTTTTT+AGG | - | chr7.2:6594339-6594358 | None:intergenic | 40.0% |
! | TTTAGAGGCATGGTAGAGAT+AGG | - | chr7.2:6594273-6594292 | None:intergenic | 40.0% |
!! | ATTTGGCTTTGCAAGTTTGG+TGG | - | chr7.2:6594243-6594262 | None:intergenic | 40.0% |
!! | GAAAAGCTTTGTTAGTGGCA+TGG | + | chr7.2:6594641-6594660 | MS.gene22997:CDS | 40.0% |
!! | GTGTTGGAAACAGGTTTTAG+AGG | - | chr7.2:6594288-6594307 | None:intergenic | 40.0% |
!! | TGCATTTGGCTTTGCAAGTT+TGG | - | chr7.2:6594246-6594265 | None:intergenic | 40.0% |
!! | TGGAAGCATTAAGTCAACAG+AGG | + | chr7.2:6595030-6595049 | MS.gene22997:CDS | 40.0% |
!!! | GTTCATAAGAGGGTTGGTTT+TGG | - | chr7.2:6594710-6594729 | None:intergenic | 40.0% |
AACAGATCCTACTGCTGAAG+TGG | + | chr7.2:6593379-6593398 | MS.gene22997:intron | 45.0% | |
AAGGCTCACCAGAAAACATG+TGG | + | chr7.2:6593716-6593735 | MS.gene22997:CDS | 45.0% | |
AATGCAACCACTTCAGCAGT+AGG | - | chr7.2:6593389-6593408 | None:intergenic | 45.0% | |
AGCTTCTCCTCAGGAAACAA+TGG | + | chr7.2:6592425-6592444 | MS.gene22997:CDS | 45.0% | |
ATCGCCGTGTGAAAATAAGG+CGG | - | chr7.2:6593809-6593828 | None:intergenic | 45.0% | |
ATGCATCACAGAATGCTCTG+TGG | - | chr7.2:6594173-6594192 | None:intergenic | 45.0% | |
GAAGAGGTCACAATCTTCCA+TGG | + | chr7.2:6593498-6593517 | MS.gene22997:CDS | 45.0% | |
GAATATTTGCCTGGAGTTCC+AGG | - | chr7.2:6592575-6592594 | None:intergenic | 45.0% | |
GCTTCCAATCTTTGTTGCTG+TGG | - | chr7.2:6595017-6595036 | None:intergenic | 45.0% | |
GGATTGTGGTGAACACATGA+TGG | - | chr7.2:6593581-6593600 | None:intergenic | 45.0% | |
GGCAACAGTCCATGATTTCT+TGG | + | chr7.2:6594959-6594978 | MS.gene22997:CDS | 45.0% | |
GTTGGAGCATGTTCTTGAGT+TGG | - | chr7.2:6594360-6594379 | None:intergenic | 45.0% | |
TAGGCAAAGAACAAGTGCAG+AGG | + | chr7.2:6593526-6593545 | MS.gene22997:CDS | 45.0% | |
TCAACCAACAATGCATGTGG+TGG | + | chr7.2:6594390-6594409 | MS.gene22997:CDS | 45.0% | |
TGAAGGGTTGAAGAAGATGG+AGG | - | chr7.2:6594465-6594484 | None:intergenic | 45.0% | |
TGCATCACAGAATGCTCTGT+GGG | - | chr7.2:6594172-6594191 | None:intergenic | 45.0% | |
! | ACTAGTGCAGGTGCACTTTT+TGG | + | chr7.2:6594423-6594442 | MS.gene22997:CDS | 45.0% |
! | AGTGGAACCATTGCTATTGC+AGG | - | chr7.2:6592519-6592538 | None:intergenic | 45.0% |
! | CCCTAGTACCACATGTTTTC+TGG | - | chr7.2:6593727-6593746 | None:intergenic | 45.0% |
! | GAAGATGGAGGCAAGGTTTT+TGG | - | chr7.2:6594453-6594472 | None:intergenic | 45.0% |
! | GTGCTACTGCAAGCAATAGT+GGG | + | chr7.2:6594601-6594620 | MS.gene22997:CDS | 45.0% |
! | TCTAACATGGCTGGTGTTAG+TGG | + | chr7.2:6594756-6594775 | MS.gene22997:CDS | 45.0% |
! | TGGAGCATGTTCTTGAGTTG+GGG | - | chr7.2:6594358-6594377 | None:intergenic | 45.0% |
!! | TCTGAGGAAGTGTTGGAAAC+AGG | - | chr7.2:6594297-6594316 | None:intergenic | 45.0% |
!!! | GGAAACAGGTTTTAGAGGCA+TGG | - | chr7.2:6594283-6594302 | None:intergenic | 45.0% |
AGAAACCTTCCTGGAACTCC+AGG | + | chr7.2:6592563-6592582 | MS.gene22997:intron | 50.0% | |
ATTTGCCTGGAGTTCCAGGA+AGG | - | chr7.2:6592571-6592590 | None:intergenic | 50.0% | |
CACAATCCAGCTCGTGCATT+AGG | + | chr7.2:6593593-6593612 | MS.gene22997:CDS | 50.0% | |
CATGCCACCACATGCATTGT+TGG | - | chr7.2:6594397-6594416 | None:intergenic | 50.0% | |
CGTGCATTAGGTGACCTTAC+TGG | + | chr7.2:6593605-6593624 | MS.gene22997:CDS | 50.0% | |
CTAATGCACGAGCTGGATTG+TGG | - | chr7.2:6593595-6593614 | None:intergenic | 50.0% | |
GACTCAAGTTCAGGTCCATC+TGG | + | chr7.2:6592491-6592510 | MS.gene22997:CDS | 50.0% | |
GATGAAGGAAGCTTCTCCTC+AGG | + | chr7.2:6592416-6592435 | MS.gene22997:CDS | 50.0% | |
GGCATGTTCTCAACTAGTGC+AGG | + | chr7.2:6594411-6594430 | MS.gene22997:CDS | 50.0% | |
GGTGAACACATGATGGCTCA+GGG | - | chr7.2:6593574-6593593 | None:intergenic | 50.0% | |
GGTTGAAGAAGATGGAGGCA+AGG | - | chr7.2:6594460-6594479 | None:intergenic | 50.0% | |
TCCACATGAGGATTCCGCAA+TGG | + | chr7.2:6595085-6595104 | MS.gene22997:CDS | 50.0% | |
TCCATTGCGGAATCCTCATG+TGG | - | chr7.2:6595089-6595108 | None:intergenic | 50.0% | |
TCTGGTGCCTGCAATAGCAA+TGG | + | chr7.2:6592509-6592528 | MS.gene22997:CDS | 50.0% | |
TGCTGGCATGGCTCAAATGT+CGG | + | chr7.2:6594545-6594564 | MS.gene22997:CDS | 50.0% | |
TGGAGGACTAATTGCTGGCA+TGG | + | chr7.2:6594533-6594552 | MS.gene22997:CDS | 50.0% | |
TGGTGAACACATGATGGCTC+AGG | - | chr7.2:6593575-6593594 | None:intergenic | 50.0% | |
! | AACATGGCTGGTGTTAGTGG+TGG | + | chr7.2:6594759-6594778 | MS.gene22997:CDS | 50.0% |
! | GCATGCCACTGGTTAATCCT+TGG | - | chr7.2:6594221-6594240 | None:intergenic | 50.0% |
! | TGGCAAGGCACTCCGATTAA+TGG | + | chr7.2:6593340-6593359 | MS.gene22997:intron | 50.0% |
! | TTGCTATTGCAGGCACCAGA+TGG | - | chr7.2:6592509-6592528 | None:intergenic | 50.0% |
!! | AGTGCAGGTGCACTTTTTGG+TGG | + | chr7.2:6594426-6594445 | MS.gene22997:CDS | 50.0% |
!! | GGTGCTACTGCAAGCAATAG+TGG | + | chr7.2:6594600-6594619 | MS.gene22997:CDS | 50.0% |
AGGTCACCTAATGCACGAGC+TGG | - | chr7.2:6593602-6593621 | None:intergenic | 55.0% | |
! | ATGGCTGGTGTTAGTGGTGG+AGG | + | chr7.2:6594762-6594781 | MS.gene22997:CDS | 55.0% |
! | CAAGTTTGGTGGCATGCCAC+TGG | - | chr7.2:6594232-6594251 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 6592398 | 6595130 | 6592398 | ID=MS.gene22997 |
chr7.2 | mRNA | 6592398 | 6595130 | 6592398 | ID=MS.gene22997.t1;Parent=MS.gene22997 |
chr7.2 | exon | 6592398 | 6592530 | 6592398 | ID=MS.gene22997.t1.exon1;Parent=MS.gene22997.t1 |
chr7.2 | CDS | 6592398 | 6592530 | 6592398 | ID=cds.MS.gene22997.t1;Parent=MS.gene22997.t1 |
chr7.2 | exon | 6593384 | 6593780 | 6593384 | ID=MS.gene22997.t1.exon2;Parent=MS.gene22997.t1 |
chr7.2 | CDS | 6593384 | 6593780 | 6593384 | ID=cds.MS.gene22997.t1;Parent=MS.gene22997.t1 |
chr7.2 | exon | 6594152 | 6595130 | 6594152 | ID=MS.gene22997.t1.exon3;Parent=MS.gene22997.t1 |
chr7.2 | CDS | 6594152 | 6595130 | 6594152 | ID=cds.MS.gene22997.t1;Parent=MS.gene22997.t1 |
Gene Sequence |
Protein sequence |