Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23233.t1 | XP_024632961.1 | 84.6 | 793 | 94 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1337.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23233.t1 | Q9SZL8 | 27.2 | 639 | 389 | 12 | 32 | 665 | 70 | 637 | 2.5e-64 | 248.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23233.t1 | D3YBB9 | 77.0 | 774 | 158 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene23233.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23233.t1 | MTR_0558s0020 | 87.162 | 296 | 37 | 1 | 1 | 295 | 1 | 296 | 0.0 | 547 |
MS.gene23233.t1 | MTR_1g083640 | 82.746 | 284 | 33 | 1 | 1 | 268 | 1 | 284 | 4.79e-172 | 496 |
MS.gene23233.t1 | MTR_8g446020 | 73.559 | 295 | 39 | 1 | 1 | 295 | 1 | 256 | 5.27e-152 | 443 |
MS.gene23233.t1 | MTR_6g090505 | 83.122 | 237 | 40 | 0 | 65 | 301 | 1 | 237 | 6.10e-142 | 422 |
MS.gene23233.t1 | MTR_6g090505 | 65.686 | 102 | 8 | 2 | 396 | 495 | 230 | 306 | 4.92e-32 | 128 |
MS.gene23233.t1 | MTR_2g014100 | 82.041 | 245 | 35 | 1 | 1 | 236 | 1 | 245 | 9.09e-142 | 417 |
MS.gene23233.t1 | MTR_0337s0040 | 71.923 | 260 | 33 | 2 | 1 | 259 | 1 | 221 | 7.88e-124 | 370 |
MS.gene23233.t1 | MTR_3g008240 | 84.236 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 4.21e-118 | 354 |
MS.gene23233.t1 | MTR_4g040430 | 83.663 | 202 | 29 | 1 | 1 | 202 | 1 | 198 | 1.35e-117 | 353 |
MS.gene23233.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 1.31e-110 | 336 |
MS.gene23233.t1 | MTR_5g071590 | 73.333 | 180 | 35 | 2 | 1 | 167 | 1 | 180 | 1.83e-89 | 279 |
MS.gene23233.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 4.60e-87 | 271 |
MS.gene23233.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 2.20e-86 | 270 |
MS.gene23233.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 618 | 765 | 1 | 151 | 9.06e-81 | 256 |
MS.gene23233.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 621 | 765 | 99 | 246 | 1.26e-71 | 236 |
MS.gene23233.t1 | MTR_4g133495 | 62.637 | 182 | 42 | 2 | 576 | 754 | 88 | 246 | 2.47e-66 | 221 |
MS.gene23233.t1 | MTR_4g133340 | 62.637 | 182 | 42 | 2 | 576 | 754 | 88 | 246 | 2.47e-66 | 221 |
MS.gene23233.t1 | MTR_1281s0010 | 80.734 | 109 | 21 | 0 | 19 | 127 | 1 | 109 | 2.53e-56 | 188 |
MS.gene23233.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 2.34e-38 | 146 |
MS.gene23233.t1 | MTR_4g008820 | 70.000 | 100 | 29 | 1 | 1 | 99 | 125 | 224 | 1.50e-31 | 131 |
MS.gene23233.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 2.85e-31 | 122 |
MS.gene23233.t1 | MTR_1g070355 | 26.235 | 324 | 218 | 6 | 41 | 362 | 80 | 384 | 1.63e-18 | 90.5 |
MS.gene23233.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 2.33e-18 | 83.2 |
MS.gene23233.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.84e-14 | 77.0 |
MS.gene23233.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.77e-13 | 66.6 |
MS.gene23233.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 1.34e-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23233.t1 | AT4G38180 | 28.106 | 644 | 377 | 15 | 32 | 665 | 70 | 637 | 2.73e-71 | 249 |
MS.gene23233.t1 | AT4G15090 | 25.000 | 720 | 448 | 15 | 50 | 753 | 66 | 709 | 3.35e-62 | 224 |
MS.gene23233.t1 | AT4G15090 | 25.000 | 720 | 448 | 15 | 50 | 753 | 66 | 709 | 3.35e-62 | 224 |
MS.gene23233.t1 | AT4G15090 | 25.000 | 720 | 448 | 15 | 50 | 753 | 66 | 709 | 3.35e-62 | 224 |
MS.gene23233.t1 | AT4G15090 | 25.000 | 720 | 448 | 15 | 50 | 753 | 66 | 709 | 3.35e-62 | 224 |
MS.gene23233.t1 | AT4G15090 | 25.000 | 720 | 448 | 15 | 50 | 753 | 66 | 709 | 3.35e-62 | 224 |
MS.gene23233.t1 | AT2G27110 | 26.633 | 597 | 364 | 15 | 127 | 719 | 108 | 634 | 5.93e-55 | 204 |
MS.gene23233.t1 | AT2G27110 | 26.633 | 597 | 364 | 15 | 127 | 719 | 108 | 634 | 5.93e-55 | 204 |
MS.gene23233.t1 | AT2G27110 | 27.701 | 509 | 311 | 11 | 213 | 719 | 36 | 489 | 8.69e-55 | 201 |
MS.gene23233.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 1.99e-52 | 195 |
MS.gene23233.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 1.99e-52 | 195 |
MS.gene23233.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 1.99e-52 | 195 |
MS.gene23233.t1 | AT1G76320 | 24.668 | 677 | 414 | 18 | 50 | 720 | 12 | 598 | 2.12e-51 | 191 |
MS.gene23233.t1 | AT1G76320 | 24.668 | 677 | 414 | 18 | 50 | 720 | 12 | 598 | 6.82e-51 | 190 |
MS.gene23233.t1 | AT1G76320 | 24.668 | 677 | 414 | 18 | 50 | 720 | 12 | 598 | 6.82e-51 | 190 |
MS.gene23233.t1 | AT1G76320 | 24.668 | 677 | 414 | 18 | 50 | 720 | 12 | 598 | 7.13e-51 | 190 |
MS.gene23233.t1 | AT3G22170 | 22.727 | 682 | 429 | 15 | 34 | 708 | 69 | 659 | 6.86e-49 | 186 |
MS.gene23233.t1 | AT3G22170 | 22.727 | 682 | 429 | 15 | 34 | 708 | 69 | 659 | 6.86e-49 | 186 |
MS.gene23233.t1 | AT5G18960 | 23.721 | 645 | 368 | 17 | 24 | 661 | 200 | 727 | 8.49e-47 | 179 |
MS.gene23233.t1 | AT5G18960 | 23.721 | 645 | 368 | 17 | 24 | 661 | 200 | 727 | 8.49e-47 | 179 |
MS.gene23233.t1 | AT4G38170 | 25.290 | 431 | 264 | 12 | 235 | 662 | 24 | 399 | 8.18e-46 | 172 |
MS.gene23233.t1 | AT1G10240 | 24.719 | 623 | 377 | 18 | 49 | 659 | 62 | 604 | 1.97e-43 | 167 |
MS.gene23233.t1 | AT1G10240 | 24.719 | 623 | 377 | 18 | 49 | 659 | 62 | 604 | 1.97e-43 | 167 |
MS.gene23233.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 6.43e-42 | 163 |
MS.gene23233.t1 | AT2G32250 | 23.925 | 744 | 431 | 20 | 4 | 743 | 10 | 622 | 8.89e-42 | 164 |
MS.gene23233.t1 | AT2G32250 | 23.925 | 744 | 431 | 20 | 4 | 743 | 10 | 622 | 1.10e-41 | 164 |
MS.gene23233.t1 | AT2G32250 | 23.925 | 744 | 431 | 20 | 4 | 743 | 10 | 622 | 1.10e-41 | 164 |
MS.gene23233.t1 | AT2G32250 | 23.925 | 744 | 431 | 20 | 4 | 743 | 10 | 622 | 1.14e-41 | 164 |
MS.gene23233.t1 | AT2G32250 | 23.925 | 744 | 431 | 20 | 4 | 743 | 10 | 622 | 1.14e-41 | 164 |
MS.gene23233.t1 | AT2G32250 | 23.925 | 744 | 431 | 20 | 4 | 743 | 10 | 622 | 1.14e-41 | 164 |
MS.gene23233.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 5.31e-41 | 160 |
MS.gene23233.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 5.31e-41 | 160 |
MS.gene23233.t1 | AT2G32250 | 23.926 | 698 | 399 | 18 | 50 | 743 | 12 | 581 | 7.61e-41 | 160 |
MS.gene23233.t1 | AT2G32250 | 23.926 | 698 | 399 | 18 | 50 | 743 | 12 | 581 | 7.91e-41 | 160 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 106 | 558 | 1.65e-40 | 159 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 163 | 615 | 1.85e-40 | 159 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 163 | 615 | 1.93e-40 | 159 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 163 | 615 | 1.93e-40 | 159 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 163 | 615 | 2.41e-40 | 159 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 163 | 615 | 2.41e-40 | 159 |
MS.gene23233.t1 | AT4G19990 | 26.378 | 508 | 314 | 10 | 219 | 721 | 177 | 629 | 3.23e-40 | 159 |
MS.gene23233.t1 | AT1G80010 | 23.737 | 653 | 375 | 22 | 41 | 662 | 101 | 661 | 1.46e-37 | 150 |
MS.gene23233.t1 | AT1G52520 | 22.472 | 623 | 407 | 15 | 41 | 662 | 91 | 638 | 1.21e-34 | 141 |
MS.gene23233.t1 | AT5G28530 | 21.940 | 629 | 351 | 20 | 40 | 660 | 60 | 556 | 5.23e-23 | 104 |
MS.gene23233.t1 | AT5G28530 | 21.781 | 629 | 348 | 21 | 40 | 660 | 60 | 552 | 2.94e-22 | 102 |
Find 114 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 7.2:+52594468 | MS.gene23233:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7.2:+52594159 | MS.gene23233:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7.2:-52595294 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.2:+52594426 | MS.gene23233:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7.2:+52593376 | MS.gene23233:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 7.2:+52593878 | MS.gene23233:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7.2:+52593911 | MS.gene23233:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7.2:-52594005 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7.2:-52595288 | None:intergenic |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7.2:+52595140 | MS.gene23233:CDS |
AATCAGAATTCGACTACAAT+TGG | 0.340016 | 7.2:+52594200 | MS.gene23233:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7.2:-52593426 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7.2:+52594723 | MS.gene23233:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 7.2:-52594023 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7.2:+52594300 | MS.gene23233:CDS |
CAAGAATTCTTTAGAAATGA+AGG | 0.372556 | 7.2:+52593268 | MS.gene23233:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7.2:+52595132 | MS.gene23233:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7.2:+52593433 | MS.gene23233:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.2:+52593425 | MS.gene23233:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7.2:+52594299 | MS.gene23233:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 7.2:-52595016 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7.2:-52592896 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7.2:+52595280 | MS.gene23233:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7.2:-52595270 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7.2:+52594600 | MS.gene23233:CDS |
GATTATGATCTTCAAACCTT+AGG | 0.400571 | 7.2:-52594771 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7.2:+52595165 | MS.gene23233:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7.2:+52592667 | MS.gene23233:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7.2:+52594848 | MS.gene23233:CDS |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7.2:+52592738 | MS.gene23233:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 7.2:+52594806 | MS.gene23233:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7.2:+52593073 | MS.gene23233:CDS |
ATTATGATCTTCAAACCTTA+GGG | 0.431360 | 7.2:-52594770 | None:intergenic |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7.2:+52592955 | MS.gene23233:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7.2:-52594016 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.2:+52592938 | MS.gene23233:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7.2:-52594949 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 7.2:+52592821 | MS.gene23233:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7.2:+52593103 | MS.gene23233:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7.2:+52592592 | MS.gene23233:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7.2:+52594090 | MS.gene23233:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7.2:+52594254 | MS.gene23233:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7.2:+52594849 | MS.gene23233:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7.2:+52592787 | MS.gene23233:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7.2:+52593148 | MS.gene23233:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7.2:-52594602 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7.2:-52592932 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7.2:+52592725 | MS.gene23233:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7.2:+52593216 | MS.gene23233:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 7.2:-52593043 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7.2:+52592781 | MS.gene23233:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7.2:+52594616 | MS.gene23233:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7.2:-52593891 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 7.2:+52595241 | MS.gene23233:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7.2:+52593229 | MS.gene23233:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.2:+52594440 | MS.gene23233:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7.2:-52594520 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7.2:+52593135 | MS.gene23233:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7.2:-52593321 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 7.2:-52593031 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7.2:+52594287 | MS.gene23233:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7.2:+52594785 | MS.gene23233:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7.2:-52593187 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7.2:+52594459 | MS.gene23233:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7.2:+52594305 | MS.gene23233:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 7.2:+52592991 | MS.gene23233:CDS |
ATCAGAATTCGACTACAATT+GGG | 0.516545 | 7.2:+52594201 | MS.gene23233:CDS |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.2:-52594408 | None:intergenic |
GATCTTCAAACCTTAGGGAA+AGG | 0.524606 | 7.2:-52594765 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7.2:+52594786 | MS.gene23233:CDS |
TTGAAGAAAACCTTTCCCTA+AGG | 0.528612 | 7.2:+52594755 | MS.gene23233:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7.2:-52594597 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 7.2:-52594036 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 7.2:+52592832 | MS.gene23233:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.2:-52594403 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7.2:+52594617 | MS.gene23233:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7.2:+52592833 | MS.gene23233:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 7.2:+52592657 | MS.gene23233:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 7.2:+52595006 | MS.gene23233:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7.2:+52592616 | MS.gene23233:CDS |
AATGAAGGTCTCTCGAAACC+AGG | 0.567433 | 7.2:+52593283 | MS.gene23233:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 7.2:+52595240 | MS.gene23233:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7.2:+52593151 | MS.gene23233:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7.2:+52595092 | MS.gene23233:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 7.2:+52592990 | MS.gene23233:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7.2:-52594521 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7.2:-52595252 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7.2:-52594542 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 7.2:+52592581 | MS.gene23233:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7.2:+52593142 | MS.gene23233:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7.2:+52595133 | MS.gene23233:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7.2:+52595128 | MS.gene23233:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7.2:-52595208 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7.2:+52593222 | MS.gene23233:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 7.2:-52595040 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7.2:+52593136 | MS.gene23233:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7.2:+52593225 | MS.gene23233:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7.2:+52595095 | MS.gene23233:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7.2:+52594518 | MS.gene23233:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7.2:+52594603 | MS.gene23233:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7.2:-52592881 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7.2:-52594256 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7.2:+52593156 | MS.gene23233:CDS |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7.2:+52594091 | MS.gene23233:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 7.2:-52595013 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.2:+52594441 | MS.gene23233:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7.2:-52594991 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7.2:-52594562 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7.2:+52595117 | MS.gene23233:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7.2:-52594867 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7.2:+52594850 | MS.gene23233:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7.2:+52594701 | MS.gene23233:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 7.2:+52594018 | MS.gene23233:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7.2:+52594702 | MS.gene23233:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGATGAAAAACTATTTTAA+TGG | + | chr7.2:52594229-52594248 | MS.gene23233:CDS | 15.0% |
!! | ATGTCTATAAGATATATAAG+TGG | + | chr7.2:52592990-52593009 | MS.gene23233:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr7.2:52592781-52592800 | MS.gene23233:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr7.2:52592991-52593010 | MS.gene23233:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr7.2:52592725-52592744 | MS.gene23233:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr7.2:52593608-52593627 | MS.gene23233:intron | 20.0% |
!!! | TGAAAAACTATTTTAATGGA+AGG | + | chr7.2:52594233-52594252 | MS.gene23233:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr7.2:52593580-52593599 | MS.gene23233:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr7.2:52594067-52594086 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr7.2:52592787-52592806 | MS.gene23233:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr7.2:52593425-52593444 | MS.gene23233:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr7.2:52593451-52593470 | None:intergenic | 25.0% |
! | ATTATGATCTTCAAACCTTA+GGG | - | chr7.2:52594773-52594792 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr7.2:52594600-52594619 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr7.2:52592657-52592676 | MS.gene23233:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr7.2:52594426-52594445 | MS.gene23233:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr7.2:52592616-52592635 | MS.gene23233:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr7.2:52593498-52593517 | MS.gene23233:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr7.2:52594565-52594584 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr7.2:52594600-52594619 | MS.gene23233:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr7.2:52594159-52594178 | MS.gene23233:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr7.2:52593600-52593619 | MS.gene23233:intron | 25.0% |
!! | CAAGAATTCTTTAGAAATGA+AGG | + | chr7.2:52593268-52593287 | MS.gene23233:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr7.2:52593855-52593874 | MS.gene23233:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr7.2:52594701-52594720 | MS.gene23233:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr7.2:52592777-52592796 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr7.2:52593607-52593626 | MS.gene23233:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr7.2:52593103-52593122 | MS.gene23233:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr7.2:52594702-52594721 | MS.gene23233:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr7.2:52593671-52593690 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr7.2:52592833-52592852 | MS.gene23233:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr7.2:52593433-52593452 | MS.gene23233:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr7.2:52595280-52595299 | MS.gene23233:CDS | 30.0% | |
AATCAGAATTCGACTACAAT+TGG | + | chr7.2:52594200-52594219 | MS.gene23233:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr7.2:52593136-52593155 | MS.gene23233:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr7.2:52592581-52592600 | MS.gene23233:CDS | 30.0% | |
ATCAGAATTCGACTACAATT+GGG | + | chr7.2:52594201-52594220 | MS.gene23233:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr7.2:52593894-52593913 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr7.2:52593376-52593395 | MS.gene23233:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr7.2:52594605-52594624 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr7.2:52593537-52593556 | MS.gene23233:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr7.2:52594603-52594622 | MS.gene23233:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr7.2:52594115-52594134 | MS.gene23233:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+AGG | - | chr7.2:52594774-52594793 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr7.2:52593429-52593448 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr7.2:52592922-52592941 | MS.gene23233:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr7.2:52592667-52592686 | MS.gene23233:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr7.2:52594411-52594430 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr7.2:52592832-52592851 | MS.gene23233:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr7.2:52593304-52593323 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr7.2:52594545-52594564 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr7.2:52595291-52595310 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr7.2:52593190-52593209 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr7.2:52593814-52593833 | MS.gene23233:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr7.2:52593034-52593053 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr7.2:52592955-52592974 | MS.gene23233:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr7.2:52594660-52594679 | MS.gene23233:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr7.2:52593180-52593199 | MS.gene23233:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr7.2:52595117-52595136 | MS.gene23233:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr7.2:52594008-52594027 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr7.2:52594058-52594077 | MS.gene23233:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr7.2:52595389-52595408 | MS.gene23233:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr7.2:52595273-52595292 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr7.2:52594885-52594904 | MS.gene23233:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr7.2:52594785-52594804 | MS.gene23233:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr7.2:52593512-52593531 | MS.gene23233:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr7.2:52595165-52595184 | MS.gene23233:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr7.2:52594786-52594805 | MS.gene23233:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr7.2:52594882-52594901 | MS.gene23233:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr7.2:52593338-52593357 | MS.gene23233:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr7.2:52593339-52593358 | MS.gene23233:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr7.2:52594950-52594969 | MS.gene23233:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr7.2:52594070-52594089 | MS.gene23233:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr7.2:52594440-52594459 | MS.gene23233:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr7.2:52592738-52592757 | MS.gene23233:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr7.2:52593638-52593657 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr7.2:52594441-52594460 | MS.gene23233:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr7.2:52593073-52593092 | MS.gene23233:CDS | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr7.2:52592821-52592840 | MS.gene23233:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr7.2:52592921-52592940 | MS.gene23233:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr7.2:52594287-52594306 | MS.gene23233:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr7.2:52592916-52592935 | MS.gene23233:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr7.2:52595371-52595390 | MS.gene23233:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr7.2:52595346-52595365 | MS.gene23233:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr7.2:52593135-52593154 | MS.gene23233:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr7.2:52592858-52592877 | MS.gene23233:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr7.2:52593216-52593235 | MS.gene23233:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr7.2:52593647-52593666 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr7.2:52592899-52592918 | None:intergenic | 35.0% | |
TTGAAGAAAACCTTTCCCTA+AGG | + | chr7.2:52594755-52594774 | MS.gene23233:CDS | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr7.2:52593911-52593930 | MS.gene23233:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr7.2:52595390-52595409 | MS.gene23233:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr7.2:52594723-52594742 | MS.gene23233:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr7.2:52594370-52594389 | MS.gene23233:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr7.2:52593518-52593537 | MS.gene23233:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr7.2:52594243-52594262 | MS.gene23233:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr7.2:52594083-52594102 | MS.gene23233:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr7.2:52595219-52595238 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr7.2:52594952-52594971 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr7.2:52594300-52594319 | MS.gene23233:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr7.2:52594892-52594911 | MS.gene23233:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr7.2:52593954-52593973 | MS.gene23233:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr7.2:52594953-52594972 | MS.gene23233:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr7.2:52594406-52594425 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr7.2:52593765-52593784 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr7.2:52595297-52595316 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr7.2:52592592-52592611 | MS.gene23233:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr7.2:52594617-52594636 | MS.gene23233:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr7.2:52594849-52594868 | MS.gene23233:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr7.2:52593651-52593670 | MS.gene23233:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr7.2:52595128-52595147 | MS.gene23233:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr7.2:52594848-52594867 | MS.gene23233:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr7.2:52595006-52595025 | MS.gene23233:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr7.2:52595241-52595260 | MS.gene23233:CDS | 40.0% | |
GATCTTCAAACCTTAGGGAA+AGG | - | chr7.2:52594768-52594787 | None:intergenic | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr7.2:52594994-52595013 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr7.2:52595019-52595038 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr7.2:52594616-52594635 | MS.gene23233:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr7.2:52594018-52594037 | MS.gene23233:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr7.2:52593761-52593780 | MS.gene23233:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr7.2:52593350-52593369 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr7.2:52594019-52594038 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr7.2:52593878-52593897 | MS.gene23233:intron | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr7.2:52595043-52595062 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr7.2:52595016-52595035 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr7.2:52595359-52595378 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr7.2:52594468-52594487 | MS.gene23233:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr7.2:52595211-52595230 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr7.2:52594895-52594914 | MS.gene23233:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr7.2:52594299-52594318 | MS.gene23233:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr7.2:52592872-52592891 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr7.2:52593142-52593161 | MS.gene23233:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr7.2:52593225-52593244 | MS.gene23233:CDS | 45.0% | |
AATGAAGGTCTCTCGAAACC+AGG | + | chr7.2:52593283-52593302 | MS.gene23233:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr7.2:52592884-52592903 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr7.2:52594259-52594278 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr7.2:52594518-52594537 | MS.gene23233:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr7.2:52594870-52594889 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr7.2:52593046-52593065 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr7.2:52592926-52592945 | MS.gene23233:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr7.2:52593222-52593241 | MS.gene23233:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr7.2:52594459-52594478 | MS.gene23233:CDS | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr7.2:52595240-52595259 | MS.gene23233:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr7.2:52594850-52594869 | MS.gene23233:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr7.2:52593324-52593343 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr7.2:52595140-52595159 | MS.gene23233:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr7.2:52592935-52592954 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr7.2:52594026-52594045 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr7.2:52594322-52594341 | MS.gene23233:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr7.2:52594305-52594324 | MS.gene23233:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr7.2:52592938-52592957 | MS.gene23233:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr7.2:52593346-52593365 | MS.gene23233:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr7.2:52594039-52594058 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr7.2:52594523-52594542 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr7.2:52594254-52594273 | MS.gene23233:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr7.2:52594806-52594825 | MS.gene23233:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr7.2:52594091-52594110 | MS.gene23233:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr7.2:52595092-52595111 | MS.gene23233:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr7.2:52595133-52595152 | MS.gene23233:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr7.2:52593627-52593646 | MS.gene23233:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr7.2:52594090-52594109 | MS.gene23233:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr7.2:52595255-52595274 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr7.2:52593148-52593167 | MS.gene23233:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr7.2:52595132-52595151 | MS.gene23233:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr7.2:52594524-52594543 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr7.2:52595146-52595165 | MS.gene23233:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr7.2:52593229-52593248 | MS.gene23233:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr7.2:52593151-52593170 | MS.gene23233:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr7.2:52595095-52595114 | MS.gene23233:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr7.2:52593156-52593175 | MS.gene23233:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 52592572 | 52595418 | 52592572 | ID=MS.gene23233 |
chr7.2 | mRNA | 52592572 | 52595418 | 52592572 | ID=MS.gene23233.t1;Parent=MS.gene23233 |
chr7.2 | exon | 52592572 | 52593454 | 52592572 | ID=MS.gene23233.t1.exon1;Parent=MS.gene23233.t1 |
chr7.2 | CDS | 52592572 | 52593454 | 52592572 | ID=cds.MS.gene23233.t1;Parent=MS.gene23233.t1 |
chr7.2 | exon | 52593888 | 52595301 | 52593888 | ID=MS.gene23233.t1.exon2;Parent=MS.gene23233.t1 |
chr7.2 | CDS | 52593888 | 52595301 | 52593888 | ID=cds.MS.gene23233.t1;Parent=MS.gene23233.t1 |
chr7.2 | exon | 52595409 | 52595418 | 52595409 | ID=MS.gene23233.t1.exon3;Parent=MS.gene23233.t1 |
chr7.2 | CDS | 52595409 | 52595418 | 52595409 | ID=cds.MS.gene23233.t1;Parent=MS.gene23233.t1 |
Gene Sequence |
Protein sequence |