AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23439

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23439.t1 MTR_7g098250 98.773 489 6 0 1 489 1 489 0.0 996
MS.gene23439.t1 MTR_1g080330 44.656 421 177 11 72 489 21 388 1.96e-96 296
MS.gene23439.t1 MTR_7g115530 47.439 371 161 10 72 437 49 390 1.60e-90 283
MS.gene23439.t1 MTR_1g080330 48.495 299 116 7 72 369 21 282 1.70e-79 249
MS.gene23439.t1 MTR_7g115530 47.682 302 129 7 72 369 49 325 1.74e-75 240
MS.gene23439.t1 MTR_7g115530 44.964 278 124 7 72 345 49 301 2.16e-61 203
MS.gene23439.t1 MTR_7g093030 53.125 160 74 1 257 416 207 365 1.20e-55 191
MS.gene23439.t1 MTR_7g115530 42.391 276 130 6 72 343 49 299 5.77e-55 188
MS.gene23439.t1 MTR_1g053835 59.441 143 56 2 252 394 248 388 1.50e-54 189
MS.gene23439.t1 MTR_2g027860 64.493 138 46 2 262 396 49 186 1.14e-51 178
MS.gene23439.t1 MTR_7g088070 56.129 155 63 2 241 395 33 182 4.67e-51 175
MS.gene23439.t1 MTR_7g088070 54.717 159 63 3 241 395 33 186 1.65e-49 171
MS.gene23439.t1 MTR_7g115530 41.434 251 118 7 72 318 49 274 5.15e-45 159
MS.gene23439.t1 MTR_6g032990 52.667 150 53 3 258 390 38 186 2.67e-44 160
MS.gene23439.t1 MTR_7g115530 40.945 254 120 8 72 321 49 276 1.48e-43 155
MS.gene23439.t1 MTR_2g086450 48.765 162 63 3 249 390 32 193 4.91e-40 149
MS.gene23439.t1 MTR_5g027440 50.355 141 58 2 262 390 25 165 4.31e-37 138
MS.gene23439.t1 MTR_5g041350 43.537 147 67 2 258 390 11 155 1.20e-36 139
MS.gene23439.t1 MTR_4g081710 46.575 146 63 3 258 390 13 156 6.56e-36 136
MS.gene23439.t1 MTR_2g027800 45.890 146 76 2 258 403 35 177 1.84e-34 131
MS.gene23439.t1 MTR_1g053800 44.966 149 76 2 248 391 158 305 3.36e-34 131
MS.gene23439.t1 MTR_6g444980 48.529 136 59 3 262 390 35 166 5.88e-34 132
MS.gene23439.t1 MTR_7g068600 50.355 141 55 4 253 384 4 138 1.96e-33 127
MS.gene23439.t1 MTR_2g027800 41.615 161 75 3 258 403 35 191 4.34e-33 128
MS.gene23439.t1 MTR_6g444980 47.692 130 59 2 262 385 35 161 7.67e-33 128
MS.gene23439.t1 MTR_1g090670 33.466 251 139 8 246 479 28 267 3.60e-31 122
MS.gene23439.t1 MTR_7g093030 57.303 89 37 1 257 345 207 294 1.08e-30 120
MS.gene23439.t1 MTR_1g053830 52.500 80 38 0 252 331 8 87 5.72e-26 102
MS.gene23439.t1 MTR_7g093010 38.509 161 91 3 229 387 185 339 8.92e-25 105
MS.gene23439.t1 MTR_1g087470 73.333 60 16 0 364 423 78 137 4.54e-21 89.7
MS.gene23439.t1 MTR_2g023580 58.824 68 28 0 251 318 44 111 6.04e-20 89.4
MS.gene23439.t1 MTR_0223s0040 67.857 56 18 0 263 318 19 74 1.66e-19 89.0
MS.gene23439.t1 MTR_1g112370 66.071 56 19 0 263 318 23 78 3.24e-19 89.0
MS.gene23439.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 8.21e-19 87.4
MS.gene23439.t1 MTR_7g069660 64.286 56 20 0 263 318 72 127 1.02e-18 87.8
MS.gene23439.t1 MTR_2g084230 67.857 56 18 0 263 318 98 153 1.09e-18 88.2
MS.gene23439.t1 MTR_8g086410 66.071 56 19 0 263 318 112 167 1.38e-18 88.2
MS.gene23439.t1 MTR_1g021520 62.121 66 25 0 263 328 127 192 1.38e-18 86.7
MS.gene23439.t1 MTR_8g086410 66.071 56 19 0 263 318 110 165 1.44e-18 88.2
MS.gene23439.t1 MTR_8g066310 54.430 79 34 1 250 326 161 239 1.49e-18 87.4
MS.gene23439.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 2.09e-18 87.4
MS.gene23439.t1 MTR_2g016220 67.857 56 18 0 263 318 90 145 2.27e-18 87.0
MS.gene23439.t1 MTR_5g019390 88.372 43 5 0 369 411 16 58 2.95e-18 79.3
MS.gene23439.t1 MTR_3g450310 56.140 57 25 0 262 318 19 75 3.05e-18 83.6
MS.gene23439.t1 MTR_8g086410 56.757 74 29 2 263 334 112 184 7.08e-18 86.3
MS.gene23439.t1 MTR_6g071625 67.857 56 18 0 263 318 203 258 7.39e-18 85.5
MS.gene23439.t1 MTR_3g064840 59.420 69 26 1 263 329 275 343 1.48e-17 85.5
MS.gene23439.t1 MTR_5g029470 61.905 63 24 0 256 318 213 275 2.20e-17 84.3
MS.gene23439.t1 MTR_2g016220 58.209 67 27 1 263 329 90 155 5.07e-17 83.2
MS.gene23439.t1 MTR_4g113140 52.778 72 34 0 253 324 226 297 1.27e-14 76.3
MS.gene23439.t1 MTR_1g090670 31.034 203 112 8 294 479 1 192 1.78e-14 73.2
MS.gene23439.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 4.71e-14 75.1
MS.gene23439.t1 MTR_2g450070 58.621 58 23 1 258 315 209 265 5.04e-14 75.1
MS.gene23439.t1 MTR_4g021790 50.000 70 34 1 262 331 168 236 7.37e-14 72.4
MS.gene23439.t1 MTR_4g086835 53.846 65 30 0 262 326 274 338 2.10e-13 72.4
MS.gene23439.t1 MTR_5g054300 48.718 78 40 0 238 315 174 251 3.07e-13 71.6
MS.gene23439.t1 MTR_4g021855 40.594 101 51 3 253 345 159 258 5.62e-13 70.1
MS.gene23439.t1 MTR_1g093080 52.381 63 30 0 262 324 211 273 7.34e-13 70.5
MS.gene23439.t1 MTR_4g121020 44.444 99 40 4 258 345 107 201 7.92e-13 71.2
MS.gene23439.t1 MTR_4g121020 44.444 99 40 4 258 345 211 305 9.86e-13 70.9
MS.gene23439.t1 MTR_4g121020 44.444 99 40 4 258 345 211 305 1.08e-12 70.9
MS.gene23439.t1 MTR_1g032570 53.968 63 28 1 258 320 127 188 1.15e-12 70.5
MS.gene23439.t1 MTR_1g032570 53.968 63 28 1 258 320 196 257 1.30e-12 70.5
MS.gene23439.t1 MTR_4g021760 44.565 92 48 3 253 342 160 250 1.56e-12 68.9
MS.gene23439.t1 MTR_3g106220 53.968 63 28 1 258 320 194 255 3.08e-12 69.3
MS.gene23439.t1 MTR_1g013170 51.471 68 32 1 258 325 187 253 3.14e-12 68.9
MS.gene23439.t1 MTR_5g017980 52.239 67 31 1 259 324 190 256 3.65e-12 67.8
MS.gene23439.t1 MTR_4g086835 53.846 65 29 1 262 326 274 337 3.70e-12 68.6
MS.gene23439.t1 MTR_4g064730 39.080 87 52 1 229 315 98 183 3.94e-12 67.4
MS.gene23439.t1 MTR_4g131580 46.835 79 40 2 258 336 196 272 8.07e-12 68.2
MS.gene23439.t1 MTR_4g131600 45.570 79 41 2 258 336 197 273 8.26e-12 67.8
MS.gene23439.t1 MTR_4g131570 51.562 64 30 1 258 321 199 261 9.00e-12 67.8
MS.gene23439.t1 MTR_7g089010 55.556 54 23 1 262 315 91 143 1.18e-11 65.9
MS.gene23439.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.21e-11 67.4
MS.gene23439.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.24e-11 67.4
MS.gene23439.t1 MTR_4g098870 59.259 54 21 1 262 315 310 362 1.33e-11 67.0
MS.gene23439.t1 MTR_4g098870 59.259 54 21 1 262 315 349 401 1.38e-11 67.4
MS.gene23439.t1 MTR_4g098870 59.259 54 21 1 262 315 330 382 1.42e-11 67.0
MS.gene23439.t1 MTR_5g014040 36.522 115 58 3 214 315 251 363 1.76e-11 66.6
MS.gene23439.t1 MTR_5g017980 52.239 67 30 2 259 324 189 254 6.59e-11 63.9
MS.gene23439.t1 MTR_5g017980 52.239 67 30 2 259 324 190 255 6.70e-11 63.9
MS.gene23439.t1 MTR_5g014040 34.167 120 64 3 214 320 251 368 7.82e-11 64.7
MS.gene23439.t1 MTR_5g014040 34.167 120 64 3 214 320 211 328 9.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23439.t1 AT4G28610 47.661 449 166 18 1 440 1 389 1.68e-109 331
MS.gene23439.t1 AT5G29000 46.851 397 174 10 18 404 5 374 4.93e-95 294
MS.gene23439.t1 AT5G29000 50.000 348 138 9 67 404 10 331 3.96e-93 288
MS.gene23439.t1 AT5G29000 50.000 348 138 9 67 404 10 331 3.96e-93 288
MS.gene23439.t1 AT3G04450 49.851 335 144 11 67 393 14 332 5.83e-84 265
MS.gene23439.t1 AT3G04450 49.851 335 144 11 67 393 14 332 5.83e-84 265
MS.gene23439.t1 AT3G04450 49.851 335 144 11 67 393 54 372 2.09e-83 265
MS.gene23439.t1 AT2G20400 48.289 263 114 6 139 391 110 360 9.44e-61 204
MS.gene23439.t1 AT2G20400 48.106 264 114 7 139 391 110 361 5.62e-59 199
MS.gene23439.t1 AT5G29000 40.625 320 158 8 18 330 5 299 5.74e-55 186
MS.gene23439.t1 AT5G06800 56.173 162 70 1 232 393 162 322 4.21e-54 186
MS.gene23439.t1 AT2G01060 64.085 142 49 2 257 396 10 151 6.61e-53 180
MS.gene23439.t1 AT5G06800 54.491 167 70 2 232 393 162 327 6.59e-52 181
MS.gene23439.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.67e-49 176
MS.gene23439.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.67e-49 176
MS.gene23439.t1 AT3G13040 54.348 184 72 4 251 429 233 409 1.67e-49 176
MS.gene23439.t1 AT3G04450 42.182 275 134 11 67 332 54 312 2.24e-46 164
MS.gene23439.t1 AT3G24120 54.483 145 54 3 262 394 41 185 9.50e-45 159
MS.gene23439.t1 AT4G13640 53.793 145 55 2 262 394 37 181 6.51e-44 157
MS.gene23439.t1 AT3G24120 53.378 148 54 4 262 394 41 188 1.17e-42 153
MS.gene23439.t1 AT4G13640 52.703 148 55 3 262 394 37 184 7.46e-42 151
MS.gene23439.t1 AT3G04030 50.676 148 58 2 258 390 41 188 6.73e-41 151
MS.gene23439.t1 AT5G18240 44.000 200 83 5 240 415 26 220 3.20e-40 149
MS.gene23439.t1 AT5G18240 44.000 200 83 5 240 415 26 220 3.20e-40 149
MS.gene23439.t1 AT1G69580 47.799 159 62 3 251 390 23 179 5.32e-39 145
MS.gene23439.t1 AT1G69580 46.875 160 63 3 251 390 23 180 1.52e-38 143
MS.gene23439.t1 AT3G04030 50.000 148 58 3 258 390 41 187 2.25e-38 144
MS.gene23439.t1 AT1G79430 46.763 139 65 2 262 394 34 169 1.33e-37 141
MS.gene23439.t1 AT5G18240 43.500 200 82 6 240 415 26 218 3.35e-37 141
MS.gene23439.t1 AT3G04030 47.973 148 56 3 258 390 41 182 2.61e-35 136
MS.gene23439.t1 AT5G18240 42.000 200 81 6 240 415 26 214 1.43e-34 134
MS.gene23439.t1 AT5G18240 42.000 200 81 6 240 415 26 214 1.43e-34 134
MS.gene23439.t1 AT2G01060 63.725 102 35 2 297 396 1 102 7.42e-33 125
MS.gene23439.t1 AT5G45580 43.709 151 67 4 262 394 7 157 2.80e-32 124
MS.gene23439.t1 AT5G45580 43.709 151 67 4 262 394 23 173 4.19e-32 124
MS.gene23439.t1 AT3G12730 42.553 141 73 2 262 394 23 163 1.43e-30 119
MS.gene23439.t1 AT5G06800 53.125 96 45 0 232 327 162 257 1.78e-26 108
MS.gene23439.t1 AT3G04030 45.536 112 46 2 294 390 1 112 1.41e-20 92.8
MS.gene23439.t1 AT2G42660 59.091 66 27 0 263 328 51 116 1.71e-20 91.3
MS.gene23439.t1 AT1G79430 41.121 107 54 3 294 394 1 104 2.40e-20 91.7
MS.gene23439.t1 AT1G14600 69.643 56 17 0 263 318 24 79 7.87e-20 89.4
MS.gene23439.t1 AT5G42630 45.455 110 47 2 227 329 69 172 3.25e-19 87.0
MS.gene23439.t1 AT2G02060 71.698 53 15 0 263 315 30 82 3.96e-19 87.4
MS.gene23439.t1 AT2G02060 71.698 53 15 0 263 315 30 82 3.96e-19 87.4
MS.gene23439.t1 AT5G42630 45.455 110 47 2 227 329 69 172 6.19e-19 87.4
MS.gene23439.t1 AT4G04605 56.522 69 30 0 263 331 15 83 9.17e-19 85.5
MS.gene23439.t1 AT4G17695 55.844 77 32 1 252 326 154 230 1.12e-18 87.4
MS.gene23439.t1 AT2G40260 66.071 56 19 0 263 318 83 138 2.03e-18 87.8
MS.gene23439.t1 AT1G32240 43.925 107 54 1 223 329 180 280 2.29e-18 87.0
MS.gene23439.t1 AT5G16560 60.274 73 26 2 263 332 220 292 3.11e-18 87.0
MS.gene23439.t1 AT1G32240 43.925 107 54 1 223 329 180 280 3.11e-18 87.0
MS.gene23439.t1 AT2G38300 54.286 70 32 0 263 332 55 124 3.91e-18 85.9
MS.gene23439.t1 AT2G06020 54.386 57 26 0 262 318 86 142 1.39e-15 77.8
MS.gene23439.t1 AT3G04030 41.964 112 44 3 294 390 1 106 2.11e-15 77.4
MS.gene23439.t1 AT2G03500 52.778 72 34 0 253 324 224 295 5.69e-15 77.4
MS.gene23439.t1 AT4G04580 52.308 65 30 1 263 327 15 78 1.63e-14 72.0
MS.gene23439.t1 AT5G18240 36.986 146 60 5 294 415 1 138 1.75e-14 74.7
MS.gene23439.t1 AT1G25550 60.000 60 24 0 262 321 209 268 3.38e-14 74.3
MS.gene23439.t1 AT4G37180 55.385 65 28 1 252 315 199 263 3.23e-13 71.2
MS.gene23439.t1 AT4G37180 55.385 65 28 1 252 315 206 270 3.60e-13 71.2
MS.gene23439.t1 AT3G12730 34.862 109 63 2 294 394 1 109 4.26e-13 68.2
MS.gene23439.t1 AT1G68670 55.556 63 28 0 262 324 215 277 4.30e-13 70.9
MS.gene23439.t1 AT3G62670 56.452 62 23 1 258 315 207 268 4.87e-13 71.2
MS.gene23439.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.87e-13 70.1
MS.gene23439.t1 AT5G59570 47.692 65 33 1 251 315 130 193 5.87e-13 70.1
MS.gene23439.t1 AT3G16857 59.322 59 23 1 262 320 167 224 6.87e-13 71.6
MS.gene23439.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.22e-13 71.2
MS.gene23439.t1 AT3G16857 59.322 59 23 1 262 320 237 294 8.57e-13 71.2
MS.gene23439.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.22e-12 69.7
MS.gene23439.t1 AT5G44190 50.769 65 31 1 254 318 139 202 1.40e-12 69.3
MS.gene23439.t1 AT2G40970 45.455 77 37 2 244 320 91 162 1.96e-12 67.8
MS.gene23439.t1 AT1G49560 49.315 73 37 0 252 324 182 254 2.07e-12 68.6
MS.gene23439.t1 AT5G05090 55.556 54 23 1 262 315 81 133 3.33e-12 67.4
MS.gene23439.t1 AT4G04555 51.786 56 27 0 263 318 15 70 3.42e-12 63.5
MS.gene23439.t1 AT3G10760 55.556 54 23 1 262 315 105 157 3.60e-12 68.2
MS.gene23439.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.52e-12 67.4
MS.gene23439.t1 AT3G46640 55.556 54 23 1 262 315 144 196 4.52e-12 67.4
MS.gene23439.t1 AT3G46640 55.556 54 23 1 262 315 144 196 5.22e-12 67.4
MS.gene23439.t1 AT5G58080 59.259 54 21 1 262 315 194 246 6.65e-12 68.2
MS.gene23439.t1 AT3G25790 56.364 55 24 0 267 321 201 255 7.10e-12 67.4
MS.gene23439.t1 AT2G20570 53.125 64 29 1 255 318 146 208 1.64e-11 66.6
MS.gene23439.t1 AT1G25550 60.784 51 20 0 262 312 209 259 2.45e-11 64.7
MS.gene23439.t1 AT4G37180 53.226 62 28 1 252 312 199 260 4.89e-11 63.9
MS.gene23439.t1 AT1G13300 49.206 63 32 0 262 324 181 243 5.83e-11 64.3
MS.gene23439.t1 AT1G49190 52.632 57 24 1 262 315 215 271 6.48e-11 64.7

Find 121 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGTTCATGCAGCCGTTTC+TGG 0.141434 7.3:-13851195 None:intergenic
ACGATACTTTGACTTCTAAT+TGG 0.176459 7.3:+13848325 MS.gene23439:CDS
ATCTGGTGTTGAGCCATTTA+AGG 0.223957 7.3:+13852954 MS.gene23439:CDS
CTTAGAAGCTTGTTGAGATT+TGG 0.249037 7.3:-13853157 None:intergenic
TGACTTGCAATGGTCCATTT+TGG 0.253593 7.3:-13853061 None:intergenic
TTACCGTATTCTTCAAATAA+TGG 0.301607 7.3:+13848093 MS.gene23439:CDS
TCTGGGGTATGTCTCCTCTA+AGG 0.303816 7.3:-13847851 None:intergenic
CAAATCTCAACAAGCTTCTA+AGG 0.304177 7.3:+13853158 MS.gene23439:CDS
CGGCTGCGAATCAGAAAATC+TGG 0.314389 7.3:-13847869 None:intergenic
GCTGATGATGATGCCTTAAA+TGG 0.316466 7.3:-13852967 None:intergenic
CATCTGTCCTTTGACGCTTA+GGG 0.327736 7.3:-13853218 None:intergenic
TCATCTGTCCTTTGACGCTT+AGG 0.327888 7.3:-13853219 None:intergenic
CAACAACTTCCAGCTCTATC+TGG 0.330349 7.3:+13848550 MS.gene23439:CDS
TCATGTTAAAAGCCACTTAC+AGG 0.337959 7.3:+13848843 MS.gene23439:CDS
TCCCTATGTTATTCAGTTGC+TGG 0.340671 7.3:-13847786 None:intergenic
TGAATTGGAAGCATCCAAAA+TGG 0.350129 7.3:+13853047 MS.gene23439:CDS
GAGCGGTGCCTGCAATATTA+TGG 0.356005 7.3:+13848239 MS.gene23439:CDS
CTCGGTGGCCATAATATTGC+AGG 0.370683 7.3:-13848247 None:intergenic
TGTCCATCCAACACCCTTAG+AGG 0.370709 7.3:+13847837 MS.gene23439:CDS
TTGTGAAGATGACTTTGAAA+TGG 0.383554 7.3:-13848497 None:intergenic
ATGAGCTTCAGCACACCCTT+AGG 0.390446 7.3:-13848796 None:intergenic
TGAGCTTCACGAGGCATTTG+TGG 0.391511 7.3:+13848648 MS.gene23439:CDS
CTGAATAACATAGGGATGTC+TGG 0.398764 7.3:+13847793 MS.gene23439:CDS
TGGAAGTTGTTGGTGACCTT+GGG 0.401493 7.3:-13848539 None:intergenic
AAAATGGACCATTGCAAGTC+AGG 0.405684 7.3:+13853063 MS.gene23439:CDS
TAGAGACGAAATATCTTCAA+TGG 0.411601 7.3:-13849748 None:intergenic
TGCAGGCACCGCTCTCTACT+TGG 0.420513 7.3:-13848230 None:intergenic
ATTGCTTCTCAAACATCATC+TGG 0.427142 7.3:-13852927 None:intergenic
TTTGAGAAGCAATGCAAATC+TGG 0.429240 7.3:+13852937 MS.gene23439:CDS
CCAATGGAAACAGTGCTTCA+TGG 0.436394 7.3:+13848148 MS.gene23439:CDS
CAGATAGAGCTGGAAGTTGT+TGG 0.437915 7.3:-13848549 None:intergenic
TTTGGTAGGAGAGTCTTTCA+TGG 0.441273 7.3:-13853022 None:intergenic
GTCATTGAGTAACATGGCTT+CGG 0.445080 7.3:+13848065 MS.gene23439:CDS
TGAGCTTCAGCACACCCTTA+GGG 0.446411 7.3:-13848795 None:intergenic
AGTCCATCGCATTCGTGGCT+TGG 0.450820 7.3:-13848623 None:intergenic
GGTCCATTATTTGAAGAATA+CGG 0.453015 7.3:-13848096 None:intergenic
AGAAGCTTGTTGAGATTTGG+AGG 0.454821 7.3:-13853154 None:intergenic
AGAGACGAAATATCTTCAAT+GGG 0.455908 7.3:-13849747 None:intergenic
TTTGACGCTTAGGGGCTTGA+GGG 0.457431 7.3:-13853209 None:intergenic
GTTGTTGGTGACCTTGGGAT+TGG 0.458647 7.3:-13848534 None:intergenic
TGCGAATAGAAGAGCAAGGC+AGG 0.459388 7.3:+13852899 MS.gene23439:CDS
CTGGAAGTTGTTGGTGACCT+TGG 0.461134 7.3:-13848540 None:intergenic
CCATGAAGCACTGTTTCCAT+TGG 0.464624 7.3:-13848148 None:intergenic
ACAAATGCCTCGTGAAGCTC+AGG 0.468546 7.3:-13848646 None:intergenic
TATCGTCATCACTGATTAGC+TGG 0.473545 7.3:-13848308 None:intergenic
CCCTATGTTATTCAGTTGCT+GGG 0.475601 7.3:-13847785 None:intergenic
TACTTGGTTATTATCAATTG+AGG 0.476017 7.3:-13848214 None:intergenic
GCAGAATTTGCTGAGGAAGA+TGG 0.480337 7.3:-13848595 None:intergenic
CTTTGACGCTTAGGGGCTTG+AGG 0.481559 7.3:-13853210 None:intergenic
TATGTCTCCTCTAAGGGTGT+TGG 0.482313 7.3:-13847844 None:intergenic
TGAAGATCGTTAGAATATCC+AGG 0.483197 7.3:-13847985 None:intergenic
GTACTACCATTAGCTTGATC+AGG 0.485584 7.3:-13853087 None:intergenic
TGATTCGCAGCCGACTTATG+TGG 0.488057 7.3:+13847879 MS.gene23439:CDS
TTATTTGAAGAATACGGTAA+TGG 0.489486 7.3:-13848090 None:intergenic
TTCTAAGCGAAATGATTGGC+AGG 0.490400 7.3:+13848275 MS.gene23439:CDS
TCAGCCATTGAAAATCCATC+TGG 0.492315 7.3:+13852985 MS.gene23439:CDS
TAATGTGTTGATGTTGTAGA+AGG 0.498623 7.3:-13848123 None:intergenic
TCAGGAGTCCATCGCATTCG+TGG 0.504175 7.3:-13848628 None:intergenic
TCAGGACCTGATCAAGCTAA+TGG 0.505420 7.3:+13853081 MS.gene23439:CDS
TCAACGAAATGCAGAAATAC+AGG 0.509552 7.3:+13848931 MS.gene23439:intron
AGAAATCAAGAAAACTAGGC+AGG 0.510355 7.3:-13848182 None:intergenic
GATCTTTCAATTGAGAAAGC+AGG 0.512244 7.3:-13847757 None:intergenic
GCTGGAAGCAGTTGAGAAGC+TGG 0.513069 7.3:+13853128 MS.gene23439:CDS
CTGAAGCTCATGAAAGTTGA+AGG 0.515183 7.3:+13848808 MS.gene23439:CDS
CACGGTTGAGGAAAGCTCGC+TGG 0.521650 7.3:+13853110 MS.gene23439:CDS
ATAAGTTCTAGTGGAGCAGT+TGG 0.527402 7.3:+13847943 MS.gene23439:CDS
TTCTACAGGAGCTACCCCTA+AGG 0.528407 7.3:+13848780 MS.gene23439:intron
TAATGGTAGTACCACGGTTG+AGG 0.529038 7.3:+13853098 MS.gene23439:CDS
AGCGAAATGATTGGCAGGAG+TGG 0.533310 7.3:+13848280 MS.gene23439:CDS
CTCAAGCCCCTAAGCGTCAA+AGG 0.535629 7.3:+13853211 MS.gene23439:CDS
GGCTGCGAATCAGAAAATCT+GGG 0.541784 7.3:-13847868 None:intergenic
TGCAGATGGAGGTCCAGAAA+CGG 0.542705 7.3:+13851182 MS.gene23439:CDS
ATCTGTCCTTTGACGCTTAG+GGG 0.544083 7.3:-13853217 None:intergenic
GCAGAGAAATCAAGAAAACT+AGG 0.544687 7.3:-13848186 None:intergenic
GATCAGGTCCTGACTTGCAA+TGG 0.546117 7.3:-13853071 None:intergenic
TATTCAAGATCTTGAGCCAA+AGG 0.548434 7.3:+13848368 MS.gene23439:CDS
GAAATCAAGAAAACTAGGCA+GGG 0.552022 7.3:-13848181 None:intergenic
TCAAGTCATATAAGTTCTAG+TGG 0.552138 7.3:+13847934 MS.gene23439:CDS
GCGAAATGATTGGCAGGAGT+GGG 0.552812 7.3:+13848281 MS.gene23439:CDS
CTGGGGTATGTCTCCTCTAA+GGG 0.553089 7.3:-13847850 None:intergenic
CCCAGCAACTGAATAACATA+GGG 0.563465 7.3:+13847785 MS.gene23439:CDS
ACATCAACACATTATTCCAA+TGG 0.565212 7.3:+13848132 MS.gene23439:CDS
TAAGTTCTAGTGGAGCAGTT+GGG 0.568512 7.3:+13847944 MS.gene23439:CDS
GGATGGACAGACAACGATGA+AGG 0.572042 7.3:-13847823 None:intergenic
GCCCAGCAACTGAATAACAT+AGG 0.578966 7.3:+13847784 MS.gene23439:CDS
AAATGGTACATACCTGTAAG+TGG 0.579249 7.3:-13848855 None:intergenic
TTCGCAGTCATTGAGTAACA+TGG 0.580455 7.3:+13848059 MS.gene23439:CDS
TATGTACCTTCAGATGACTC+TGG 0.581225 7.3:-13848969 None:intergenic
GGAAGCTCTACGACTGCAGA+TGG 0.586016 7.3:+13851168 MS.gene23439:CDS
ACGGCTGCATGAACAGCTTG+AGG 0.587387 7.3:+13851201 MS.gene23439:CDS
TCTCCTCTAAGGGTGTTGGA+TGG 0.587533 7.3:-13847840 None:intergenic
GGCTGTTGCAGAATTTGCTG+AGG 0.587897 7.3:-13848602 None:intergenic
GAAGATCGTTAGAATATCCA+GGG 0.589349 7.3:-13847984 None:intergenic
TGACAGTGGTATTGAGATCA+CGG 0.590168 7.3:+13851147 MS.gene23439:intron
TCTACAGGAGCTACCCCTAA+GGG 0.595403 7.3:+13848781 MS.gene23439:intron
AAATCAAGAAAACTAGGCAG+GGG 0.598415 7.3:-13848180 None:intergenic
GAGGCTGTCAATCAACTTGG+TGG 0.598508 7.3:+13848670 MS.gene23439:CDS
GTATTCTTCAAATAATGGAC+CGG 0.599927 7.3:+13848098 MS.gene23439:CDS
CAGCCAAGCCACGAATGCGA+TGG 0.603901 7.3:+13848620 MS.gene23439:CDS
AGGCTGTCAATCAACTTGGT+GGG 0.604087 7.3:+13848671 MS.gene23439:CDS
GCTTCACGAGGCATTTGTGG+AGG 0.611503 7.3:+13848651 MS.gene23439:CDS
GTGGAGGCTGTCAATCAACT+TGG 0.611778 7.3:+13848667 MS.gene23439:CDS
GAGCTTCAGCACACCCTTAG+GGG 0.611866 7.3:-13848794 None:intergenic
ATTTCGCTTAGAAAACTCCT+CGG 0.613155 7.3:-13848265 None:intergenic
GTTGATGTTGTAGAAGGTAC+CGG 0.613506 7.3:-13848117 None:intergenic
CTATCTGGAGAAAATCATGT+TGG 0.628306 7.3:+13848565 MS.gene23439:CDS
TCGGCAGGACACCAATCCCA+AGG 0.630813 7.3:+13848523 MS.gene23439:CDS
TATAGACCAGAGTCATCTGA+AGG 0.642332 7.3:+13848963 MS.gene23439:CDS
GTGTCAGAAGACACTCCAGA+TGG 0.648683 7.3:-13853000 None:intergenic
CAGCGAGCTTTCCTCAACCG+TGG 0.657234 7.3:-13853109 None:intergenic
GATAATAACCAAGTAGAGAG+CGG 0.662017 7.3:+13848222 MS.gene23439:CDS
ATGGACTCCTGAGCTTCACG+AGG 0.664112 7.3:+13848639 MS.gene23439:CDS
AGCTCTACGACTGCAGATGG+AGG 0.664727 7.3:+13851171 MS.gene23439:CDS
GCTTCTCAAACATCATCTGG+AGG 0.671425 7.3:-13852924 None:intergenic
TCGCTTAGAAAACTCCTCGG+TGG 0.696184 7.3:-13848262 None:intergenic
CAGTTGCGAATAGAAGAGCA+AGG 0.699827 7.3:+13852895 MS.gene23439:CDS
GCTGCGAATCAGAAAATCTG+GGG 0.701278 7.3:-13847867 None:intergenic
CTGCAATATTATGGCCACCG+AGG 0.705670 7.3:+13848248 MS.gene23439:CDS
GAGACGAAATATCTTCAATG+GGG 0.720068 7.3:-13849746 None:intergenic
TCAAGCTAATGGTAGTACCA+CGG 0.727330 7.3:+13853092 MS.gene23439:CDS
AAGATCGTTAGAATATCCAG+GGG 0.749204 7.3:-13847983 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCGTTTTTTAATAAAAAAA+CGG + chr7.3:13851656-13851675 MS.gene23439:intron 10.0%
!! AACAGATAAACAAAAAATTA+TGG + chr7.3:13850839-13850858 MS.gene23439:intron 15.0%
!! AATTTATTTAAGAAACATGT+TGG + chr7.3:13848443-13848462 MS.gene23439:intron 15.0%
!! ACAGATAAACAAAAAATTAT+GGG + chr7.3:13850840-13850859 MS.gene23439:intron 15.0%
!! ATTTATCATCTATAACTTAA+TGG + chr7.3:13851349-13851368 MS.gene23439:intron 15.0%
!! ATTTATTTAAGAAACATGTT+GGG + chr7.3:13848444-13848463 MS.gene23439:intron 15.0%
!! TATGTAAAAAAGAATTTGAA+TGG + chr7.3:13849223-13849242 MS.gene23439:intron 15.0%
!! TGTAATTAATTACACAAATA+AGG - chr7.3:13849673-13849692 None:intergenic 15.0%
!!! TAAGATTTTCTATTTTCTTT+CGG - chr7.3:13850501-13850520 None:intergenic 15.0%
!!! TCGTTTTTTAATAAAAAAAC+GGG + chr7.3:13851657-13851676 MS.gene23439:intron 15.0%
!! AAAGAATTAAGATCTTACTT+TGG - chr7.3:13848726-13848745 None:intergenic 20.0%
!! AAAGGAAGTAGAATAATATT+CGG + chr7.3:13851625-13851644 MS.gene23439:intron 20.0%
!! AACAATACATAACAAAATAG+AGG - chr7.3:13849818-13849837 None:intergenic 20.0%
!! AACCAAAATATTGTATACAA+AGG - chr7.3:13849292-13849311 None:intergenic 20.0%
!! AAGCACATAAAAAATAATTG+AGG - chr7.3:13848758-13848777 None:intergenic 20.0%
!! AATCTAATCAATCAATCTAA+AGG + chr7.3:13850220-13850239 MS.gene23439:intron 20.0%
!! ACCAAAATATTGTATACAAA+GGG - chr7.3:13849291-13849310 None:intergenic 20.0%
!! ATGATATATGCATAATTACT+AGG - chr7.3:13850801-13850820 None:intergenic 20.0%
!! CTAATAAAAGATTAGACTAA+AGG - chr7.3:13849529-13849548 None:intergenic 20.0%
!! CTACATTTCAAACAATATTA+CGG - chr7.3:13852718-13852737 None:intergenic 20.0%
!! CTATAAAAGCAATAAATAAG+TGG + chr7.3:13851764-13851783 MS.gene23439:intron 20.0%
!! GGGAAAAAAGAAAATATTTA+AGG - chr7.3:13852621-13852640 None:intergenic 20.0%
!! TATTTGAATATAAGCATTCA+AGG - chr7.3:13848904-13848923 None:intergenic 20.0%
!! TCTATGTCTCTATTTATAAA+AGG + chr7.3:13850673-13850692 MS.gene23439:intron 20.0%
!! TGTTAGTATGTTAATTGTTA+TGG + chr7.3:13851406-13851425 MS.gene23439:intron 20.0%
!! TTATGTATTGTTGTATTTCT+AGG + chr7.3:13849826-13849845 MS.gene23439:intron 20.0%
!! TTGACAAAATGTTATCTTTA+TGG - chr7.3:13852487-13852506 None:intergenic 20.0%
!!! AAATAAAATGTCACTTAATC+TGG + chr7.3:13852248-13852267 MS.gene23439:intron 20.0%
!!! AAATACTTTTAGGATTTACT+CGG + chr7.3:13851531-13851550 MS.gene23439:intron 20.0%
!!! AATAAAATGTCACTTAATCT+GGG + chr7.3:13852249-13852268 MS.gene23439:intron 20.0%
!!! AGTGTGAATAAAATACTTTT+AGG + chr7.3:13851521-13851540 MS.gene23439:intron 20.0%
!!! CAAATTTTTGCATATTAGTT+AGG + chr7.3:13849027-13849046 MS.gene23439:intron 20.0%
!!! CTATATTTGACTTCTTTAAA+GGG + chr7.3:13849931-13849950 MS.gene23439:intron 20.0%
!!! GTGAATAATCGTTTTTTTAA+TGG + chr7.3:13851379-13851398 MS.gene23439:intron 20.0%
!!! TATATTTGACTTCTTTAAAG+GGG + chr7.3:13849932-13849951 MS.gene23439:intron 20.0%
!!! TCTATATTTGACTTCTTTAA+AGG + chr7.3:13849930-13849949 MS.gene23439:intron 20.0%
!!! TGATAAATTTCTAAAAGTCA+TGG - chr7.3:13851337-13851356 None:intergenic 20.0%
!!! TTTTAGAAGTAGTAAGATTT+TGG - chr7.3:13852088-13852107 None:intergenic 20.0%
! AAAAGCAATAAATAAGTGGA+TGG + chr7.3:13851768-13851787 MS.gene23439:intron 25.0%
! AAGTCTTAAATTGTTGTCTA+TGG + chr7.3:13849258-13849277 MS.gene23439:intron 25.0%
! AATTGCCTTTATTAAGTAGA+TGG + chr7.3:13849106-13849125 MS.gene23439:intron 25.0%
! ACAGTTCATTGGAAAAAAAA+TGG - chr7.3:13850070-13850089 None:intergenic 25.0%
! ATATGCATGTGCATTTAAAA+CGG + chr7.3:13850024-13850043 MS.gene23439:intron 25.0%
! ATATTACTAGCTAGGATAAT+TGG - chr7.3:13850348-13850367 None:intergenic 25.0%
! CAAAAAAAAATGTCTTGAAG+AGG - chr7.3:13852585-13852604 None:intergenic 25.0%
! CAATAAAAAAGTTCACTGTT+AGG - chr7.3:13849578-13849597 None:intergenic 25.0%
! GAAACTATATAGATAAAGTG+AGG - chr7.3:13851939-13851958 None:intergenic 25.0%
! GAACAGCATATAAAACATTT+AGG - chr7.3:13850180-13850199 None:intergenic 25.0%
! GGTAAAAATTTAATAGCCAA+TGG - chr7.3:13849069-13849088 None:intergenic 25.0%
! GGTTATGAGAATATGATATT+TGG - chr7.3:13851976-13851995 None:intergenic 25.0%
! GTCAATTTACATAATAGAAC+TGG + chr7.3:13851842-13851861 MS.gene23439:intron 25.0%
! GTGAATAAATTCAAGGAAAA+TGG + chr7.3:13851586-13851605 MS.gene23439:intron 25.0%
! TACTTGGTTATTATCAATTG+AGG - chr7.3:13848217-13848236 None:intergenic 25.0%
! TATCATCTGTTAATCTGATA+AGG + chr7.3:13850815-13850834 MS.gene23439:intron 25.0%
! TATTATTCTACTTCCTTTAC+AGG - chr7.3:13851623-13851642 None:intergenic 25.0%
! TCTTTGAATCTAACACAAAA+GGG - chr7.3:13852869-13852888 None:intergenic 25.0%
! TGATTGATTAGATTAGATGT+TGG - chr7.3:13850214-13850233 None:intergenic 25.0%
! TGTAAATTGACTATGCATTT+AGG - chr7.3:13851833-13851852 None:intergenic 25.0%
! TGTATAATTGTAGATACTTG+TGG + chr7.3:13852355-13852374 MS.gene23439:intron 25.0%
! TTACCGTATTCTTCAAATAA+TGG + chr7.3:13848093-13848112 MS.gene23439:CDS 25.0%
! TTATTTGAAGAATACGGTAA+TGG - chr7.3:13848093-13848112 None:intergenic 25.0%
! TTCTTTGAATCTAACACAAA+AGG - chr7.3:13852870-13852889 None:intergenic 25.0%
!! AAAGTCATCTTCACAATTTT+CGG + chr7.3:13848504-13848523 MS.gene23439:CDS 25.0%
!! AGTATTTTATTCACACTAGT+TGG - chr7.3:13851518-13851537 None:intergenic 25.0%
!! ATATTTGACTTCTTTAAAGG+GGG + chr7.3:13849933-13849952 MS.gene23439:intron 25.0%
!! CAATTTCTTAGACAACATTT+TGG + chr7.3:13849862-13849881 MS.gene23439:intron 25.0%
!! CTTTTATTAGATTTGCGTAT+TGG + chr7.3:13849539-13849558 MS.gene23439:intron 25.0%
!! GAATATGATATTTGGTGAAA+AGG - chr7.3:13851968-13851987 None:intergenic 25.0%
!! GGAAATCATTTTCTCAAAAA+TGG - chr7.3:13849378-13849397 None:intergenic 25.0%
!! GTATTTTATTCACACTAGTT+GGG - chr7.3:13851517-13851536 None:intergenic 25.0%
!! TATTTTATTCACACTAGTTG+GGG - chr7.3:13851516-13851535 None:intergenic 25.0%
!! TCATTCTCTTTTACAAATCA+AGG - chr7.3:13852557-13852576 None:intergenic 25.0%
!! TCTTTTACAAATCAAGGAAT+GGG - chr7.3:13852551-13852570 None:intergenic 25.0%
!! TTGTCAGATTTTCTGTTAAT+TGG + chr7.3:13849132-13849151 MS.gene23439:intron 25.0%
!!! ATATTTGGTTTTGTTGTAGT+GGG + chr7.3:13850114-13850133 MS.gene23439:intron 25.0%
!!! ATTATGAAAGATACTGATTC+AGG + chr7.3:13850463-13850482 MS.gene23439:intron 25.0%
!!! CATTTTTGGATAAACTGATT+AGG + chr7.3:13852656-13852675 MS.gene23439:intron 25.0%
!!! TACAATTTGTTGAATACTGT+TGG + chr7.3:13849698-13849717 MS.gene23439:intron 25.0%
!!! TAGACATTTTTAATTAGAGC+AGG - chr7.3:13850754-13850773 None:intergenic 25.0%
AAATTCCAAGTTTCTCGATA+TGG - chr7.3:13849172-13849191 None:intergenic 30.0%
AAGAGCCATCTACTTAATAA+AGG - chr7.3:13849114-13849133 None:intergenic 30.0%
AATGCACATTTCGTTCATTT+GGG + chr7.3:13852187-13852206 MS.gene23439:intron 30.0%
AATTCTACAGCAAACTTTAC+AGG - chr7.3:13849090-13849109 None:intergenic 30.0%
ACATCAACACATTATTCCAA+TGG + chr7.3:13848132-13848151 MS.gene23439:CDS 30.0%
ACGCAGTAGTTAAAATTCAA+TGG - chr7.3:13849399-13849418 None:intergenic 30.0%
AGAGACGAAATATCTTCAAT+GGG - chr7.3:13849750-13849769 None:intergenic 30.0%
ATGTCTAACTAATTCCTAGT+TGG + chr7.3:13850767-13850786 MS.gene23439:intron 30.0%
CAAAAATTTGTCCATGCAAA+AGG - chr7.3:13849017-13849036 None:intergenic 30.0%
CTAGAATGATATTACTAGCT+AGG - chr7.3:13850356-13850375 None:intergenic 30.0%
CTTTATGCATATGGCATTTA+GGG + chr7.3:13852738-13852757 MS.gene23439:intron 30.0%
CTTTGAATCTAACACAAAAG+GGG - chr7.3:13852868-13852887 None:intergenic 30.0%
GAGCATTACTCTATATTTCA+AGG - chr7.3:13849651-13849670 None:intergenic 30.0%
GAGCTTAGTGAATAAATTCA+AGG + chr7.3:13851579-13851598 MS.gene23439:intron 30.0%
GAGTAAAATGCTAGAAAAGT+AGG + chr7.3:13850885-13850904 MS.gene23439:intron 30.0%
GCAAAGTTATAACAGTTCAT+TGG - chr7.3:13850081-13850100 None:intergenic 30.0%
GGTCCATTATTTGAAGAATA+CGG - chr7.3:13848099-13848118 None:intergenic 30.0%
GTAATGAAAACCTTAACCTT+TGG - chr7.3:13848387-13848406 None:intergenic 30.0%
TAACTACTGCGTAATTAGTT+GGG + chr7.3:13849407-13849426 MS.gene23439:intron 30.0%
TAATGCACATTTCGTTCATT+TGG + chr7.3:13852186-13852205 MS.gene23439:intron 30.0%
TAGAGACGAAATATCTTCAA+TGG - chr7.3:13849751-13849770 None:intergenic 30.0%
TATGCATAATTACTAGGAAC+AGG - chr7.3:13850795-13850814 None:intergenic 30.0%
TGTCTAACTAATTCCTAGTT+GGG + chr7.3:13850768-13850787 MS.gene23439:intron 30.0%
TGTTATAACTTTGCAACAGT+AGG + chr7.3:13850087-13850106 MS.gene23439:intron 30.0%
TTAACTACTGCGTAATTAGT+TGG + chr7.3:13849406-13849425 MS.gene23439:intron 30.0%
TTGCATATTAGTTAGGACAT+AGG + chr7.3:13849034-13849053 MS.gene23439:intron 30.0%
TTTCCATTCATCATTGATGT+CGG + chr7.3:13850287-13850306 MS.gene23439:intron 30.0%
TTTGAATCTAACACAAAAGG+GGG - chr7.3:13852867-13852886 None:intergenic 30.0%
! ACGATACTTTGACTTCTAAT+TGG + chr7.3:13848325-13848344 MS.gene23439:CDS 30.0%
! AGATCTTTTTCCACATAAGT+CGG - chr7.3:13847892-13847911 None:intergenic 30.0%
! AGGATTTGTTTGTTTCTTCT+TGG + chr7.3:13852676-13852695 MS.gene23439:intron 30.0%
! AGTTTTCTAAGCGAAATGAT+TGG + chr7.3:13848271-13848290 MS.gene23439:CDS 30.0%
! ATTAGATGTTGGTAAAAGCT+CGG - chr7.3:13850203-13850222 None:intergenic 30.0%
! CTCTTTTACAAATCAAGGAA+TGG - chr7.3:13852552-13852571 None:intergenic 30.0%
! GCCCTTTGTATACAATATTT+TGG + chr7.3:13849287-13849306 MS.gene23439:intron 30.0%
! GGATTTGTTTGTTTCTTCTT+GGG + chr7.3:13852677-13852696 MS.gene23439:intron 30.0%
! GTATTATAATGCCTTTTGCA+TGG + chr7.3:13849003-13849022 MS.gene23439:intron 30.0%
! TAATGTGTTGATGTTGTAGA+AGG - chr7.3:13848126-13848145 None:intergenic 30.0%
! TATGTCTCTATGTAAGCTTT+TGG + chr7.3:13851012-13851031 MS.gene23439:intron 30.0%
! TATTTTCTTTTTTCCCCTTC+TGG + chr7.3:13852625-13852644 MS.gene23439:intron 30.0%
! TCAAGTCATATAAGTTCTAG+TGG + chr7.3:13847934-13847953 MS.gene23439:CDS 30.0%
! TTGTGAAGATGACTTTGAAA+TGG - chr7.3:13848500-13848519 None:intergenic 30.0%
! TTTAACCTCCTTTTCAAACT+AGG + chr7.3:13852060-13852079 MS.gene23439:intron 30.0%
! TTTTATGTGCTTCTTTCTAC+AGG + chr7.3:13848766-13848785 MS.gene23439:intron 30.0%
! TTTTGGATCCTAGTTTGAAA+AGG - chr7.3:13852071-13852090 None:intergenic 30.0%
!! ACTCATTTTGTTTCTTTAGG+CGG + chr7.3:13848468-13848487 MS.gene23439:intron 30.0%
!! ATTATGGGTGTTTTCAAGAT+TGG + chr7.3:13850855-13850874 MS.gene23439:intron 30.0%
!! GAAATGTAGCTTTATGCATA+TGG + chr7.3:13852729-13852748 MS.gene23439:intron 30.0%
!! GGAACTCATTTTGTTTCTTT+AGG + chr7.3:13848465-13848484 MS.gene23439:intron 30.0%
!! GTATTCTTCAAATAATGGAC+CGG + chr7.3:13848098-13848117 MS.gene23439:CDS 30.0%
!!! AGTGAACTTTTTTATTGACC+GGG + chr7.3:13849581-13849600 MS.gene23439:intron 30.0%
!!! CAGTGAACTTTTTTATTGAC+CGG + chr7.3:13849580-13849599 MS.gene23439:intron 30.0%
!!! CATATTTGGTTTTGTTGTAG+TGG + chr7.3:13850113-13850132 MS.gene23439:intron 30.0%
!!! GGTCATTTGTTTTGTTTGAA+GGG + chr7.3:13850308-13850327 MS.gene23439:intron 30.0%
AAAAATGTCCTGATTCCAGA+AGG - chr7.3:13852643-13852662 None:intergenic 35.0%
AAAATGTCCTGATTCCAGAA+GGG - chr7.3:13852642-13852661 None:intergenic 35.0%
AAATCAAGAAAACTAGGCAG+GGG - chr7.3:13848183-13848202 None:intergenic 35.0%
AAATGGTACATACCTGTAAG+TGG - chr7.3:13848858-13848877 None:intergenic 35.0%
AAATGGTTTACCCTTACATG+AGG - chr7.3:13849361-13849380 None:intergenic 35.0%
AACATCAAATGCACAAAACC+CGG - chr7.3:13849602-13849621 None:intergenic 35.0%
AAGATCGTTAGAATATCCAG+GGG - chr7.3:13847986-13848005 None:intergenic 35.0%
ACACAGACATGAATAGTGAT+TGG + chr7.3:13851099-13851118 MS.gene23439:intron 35.0%
ACCATTTGCTTTATCTTCCA+AGG + chr7.3:13848871-13848890 MS.gene23439:intron 35.0%
AGAAATCAAGAAAACTAGGC+AGG - chr7.3:13848185-13848204 None:intergenic 35.0%
AGAAGAAAAACGTCTTACAG+TGG + chr7.3:13850567-13850586 MS.gene23439:intron 35.0%
ATCTTCTAACTCTGAATCAG+TGG + chr7.3:13850527-13850546 MS.gene23439:intron 35.0%
ATGCACATTTCGTTCATTTG+GGG + chr7.3:13852188-13852207 MS.gene23439:intron 35.0%
ATTAGTTAGGACATAGGATG+AGG + chr7.3:13849040-13849059 MS.gene23439:intron 35.0%
ATTCAGAGTTAGAAGATGGT+GGG - chr7.3:13850524-13850543 None:intergenic 35.0%
ATTGCTTCTCAAACATCATC+TGG - chr7.3:13852930-13852949 None:intergenic 35.0%
ATTTCGCTTAGAAAACTCCT+CGG - chr7.3:13848268-13848287 None:intergenic 35.0%
CAAAACTCTTTGACTCTCTT+CGG - chr7.3:13849469-13849488 None:intergenic 35.0%
CAAATCTCAACAAGCTTCTA+AGG + chr7.3:13853158-13853177 MS.gene23439:CDS 35.0%
CAGCAGATGAGATAACTTTA+CGG - chr7.3:13850441-13850460 None:intergenic 35.0%
CATCAATAAAGTCTACAGCA+AGG + chr7.3:13850922-13850941 MS.gene23439:intron 35.0%
CTAAGTTATATGGATCAGGA+AGG + chr7.3:13850947-13850966 MS.gene23439:intron 35.0%
CTATCTGGAGAAAATCATGT+TGG + chr7.3:13848565-13848584 MS.gene23439:CDS 35.0%
CTCACATTAAGTGGTGTTTA+AGG + chr7.3:13851726-13851745 MS.gene23439:intron 35.0%
CTCTCCTACCAAAAATGAAT+TGG + chr7.3:13853032-13853051 MS.gene23439:CDS 35.0%
CTGTATCAGATCATCTGAAA+AGG - chr7.3:13852837-13852856 None:intergenic 35.0%
GAAATCAAGAAAACTAGGCA+GGG - chr7.3:13848184-13848203 None:intergenic 35.0%
GAAGATCGTTAGAATATCCA+GGG - chr7.3:13847987-13848006 None:intergenic 35.0%
GAGACATAGAATGTAAGAGA+AGG - chr7.3:13850663-13850682 None:intergenic 35.0%
GAGACGAAATATCTTCAATG+GGG - chr7.3:13849749-13849768 None:intergenic 35.0%
GATAATAACCAAGTAGAGAG+CGG + chr7.3:13848222-13848241 MS.gene23439:CDS 35.0%
GATCTTTCAATTGAGAAAGC+AGG - chr7.3:13847760-13847779 None:intergenic 35.0%
GCAACAGTAGGTAACATATT+TGG + chr7.3:13850099-13850118 MS.gene23439:intron 35.0%
GCAGAGAAATCAAGAAAACT+AGG - chr7.3:13848189-13848208 None:intergenic 35.0%
GCTTTATGCATATGGCATTT+AGG + chr7.3:13852737-13852756 MS.gene23439:intron 35.0%
GTCTAACTAATTCCTAGTTG+GGG + chr7.3:13850769-13850788 MS.gene23439:intron 35.0%
TATTCAAGATCTTGAGCCAA+AGG + chr7.3:13848368-13848387 MS.gene23439:CDS 35.0%
TCAACGAAATGCAGAAATAC+AGG + chr7.3:13848931-13848950 MS.gene23439:intron 35.0%
TCATGTTAAAAGCCACTTAC+AGG + chr7.3:13848843-13848862 MS.gene23439:CDS 35.0%
TCCTTGGAAGATAAAGCAAA+TGG - chr7.3:13848875-13848894 None:intergenic 35.0%
TCTTCTAACTCTGAATCAGT+GGG + chr7.3:13850528-13850547 MS.gene23439:intron 35.0%
TGAAGATCGTTAGAATATCC+AGG - chr7.3:13847988-13848007 None:intergenic 35.0%
TTGAATCTAACACAAAAGGG+GGG - chr7.3:13852866-13852885 None:intergenic 35.0%
TTTGAGAAGCAATGCAAATC+TGG + chr7.3:13852937-13852956 MS.gene23439:CDS 35.0%
! AAAGGCATGACAACTATAAG+AGG - chr7.3:13852819-13852838 None:intergenic 35.0%
! ACTGATTCAGAGTTAGAAGA+TGG - chr7.3:13850528-13850547 None:intergenic 35.0%
! AGTGTTTTTCATGAGGTGAA+AGG - chr7.3:13848020-13848039 None:intergenic 35.0%
! ATTTGTTGAATACTGTTGGC+AGG + chr7.3:13849702-13849721 MS.gene23439:intron 35.0%
! CTTACAGTGGTATCTTTTCT+AGG + chr7.3:13850580-13850599 MS.gene23439:intron 35.0%
! CTTGCTGTAGACTTTATTGA+TGG - chr7.3:13850924-13850943 None:intergenic 35.0%
! GGATGCTTCCAATTCATTTT+TGG - chr7.3:13853043-13853062 None:intergenic 35.0%
! GTGTTTTTCATGAGGTGAAA+GGG - chr7.3:13848019-13848038 None:intergenic 35.0%
! GTTGTTGTGTGTAAGCTTTT+TGG + chr7.3:13851057-13851076 MS.gene23439:intron 35.0%
! TCATTGCTTGTTGAAGCAAA+TGG - chr7.3:13851997-13852016 None:intergenic 35.0%
! TTAGATGTTGGTAAAAGCTC+GGG - chr7.3:13850202-13850221 None:intergenic 35.0%
! TTTTGTTCTTGACACAGTTC+AGG - chr7.3:13850616-13850635 None:intergenic 35.0%
!! CAGCAAGGTTCTAAGTTATA+TGG + chr7.3:13850937-13850956 MS.gene23439:intron 35.0%
!! CTTAGAAGCTTGTTGAGATT+TGG - chr7.3:13853160-13853179 None:intergenic 35.0%
!! GGTTCTAAGTTATATGGATC+AGG + chr7.3:13850943-13850962 MS.gene23439:intron 35.0%
!! TGAATTGGAAGCATCCAAAA+TGG + chr7.3:13853047-13853066 MS.gene23439:CDS 35.0%
!!! CGGTCATTTGTTTTGTTTGA+AGG + chr7.3:13850307-13850326 MS.gene23439:intron 35.0%
!!! CTTCTAGAGTGTTTTTCATG+AGG - chr7.3:13848027-13848046 None:intergenic 35.0%
!!! GAGAATGTAGCTTTTGAAAC+TGG + chr7.3:13850248-13850267 MS.gene23439:intron 35.0%
!!! GCTTCCAATTCATTTTTGGT+AGG - chr7.3:13853039-13853058 None:intergenic 35.0%
!!! TTCTGGAATCAGGACATTTT+TGG + chr7.3:13852642-13852661 MS.gene23439:intron 35.0%
AAAATGGACCATTGCAAGTC+AGG + chr7.3:13853063-13853082 MS.gene23439:CDS 40.0%
AAATGTCCTGATTCCAGAAG+GGG - chr7.3:13852641-13852660 None:intergenic 40.0%
AACACCACTTAATGTGAGAC+AGG - chr7.3:13851724-13851743 None:intergenic 40.0%
AACCATTGCATCATTGACAG+TGG + chr7.3:13851133-13851152 MS.gene23439:intron 40.0%
ACACCACTTAATGTGAGACA+GGG - chr7.3:13851723-13851742 None:intergenic 40.0%
AGATCTTGAGCCAAAGGTTA+AGG + chr7.3:13848374-13848393 MS.gene23439:intron 40.0%
CCCAGCAACTGAATAACATA+GGG + chr7.3:13847785-13847804 MS.gene23439:CDS 40.0%
CCCTATGTTATTCAGTTGCT+GGG - chr7.3:13847788-13847807 None:intergenic 40.0%
CGTAAAGTTATCTCATCTGC+TGG + chr7.3:13850439-13850458 MS.gene23439:intron 40.0%
CTAAAATAGCGTGCTTTGCT+GGG + chr7.3:13852102-13852121 MS.gene23439:intron 40.0%
CTCGGATTATCTACTTCAAC+TGG + chr7.3:13851549-13851568 MS.gene23439:intron 40.0%
CTGAAGCTCATGAAAGTTGA+AGG + chr7.3:13848808-13848827 MS.gene23439:CDS 40.0%
CTGAATAACATAGGGATGTC+TGG + chr7.3:13847793-13847812 MS.gene23439:CDS 40.0%
GATTCAGAGTTAGAAGATGG+TGG - chr7.3:13850525-13850544 None:intergenic 40.0%
GCATTCAAGGAAACAATCCT+TGG - chr7.3:13848891-13848910 None:intergenic 40.0%
GTCATTGAGTAACATGGCTT+CGG + chr7.3:13848065-13848084 MS.gene23439:CDS 40.0%
GTCTAAACACAGTGTCTTAG+TGG + chr7.3:13851685-13851704 MS.gene23439:intron 40.0%
TAAAATAGCGTGCTTTGCTG+GGG + chr7.3:13852103-13852122 MS.gene23439:intron 40.0%
TAAATTGCACCCCTCTTTAG+AGG + chr7.3:13850146-13850165 MS.gene23439:intron 40.0%
TACCACTGTCAATGATGCAA+TGG - chr7.3:13851138-13851157 None:intergenic 40.0%
TATAGACCAGAGTCATCTGA+AGG + chr7.3:13848963-13848982 MS.gene23439:CDS 40.0%
TATGTACCTTCAGATGACTC+TGG - chr7.3:13848972-13848991 None:intergenic 40.0%
TCAAGCTAATGGTAGTACCA+CGG + chr7.3:13853092-13853111 MS.gene23439:CDS 40.0%
TCAGCCATTGAAAATCCATC+TGG + chr7.3:13852985-13853004 MS.gene23439:CDS 40.0%
TCCCTATGTTATTCAGTTGC+TGG - chr7.3:13847789-13847808 None:intergenic 40.0%
TGAATCTAACACAAAAGGGG+GGG - chr7.3:13852865-13852884 None:intergenic 40.0%
TGACCGACATCAATGATGAA+TGG - chr7.3:13850293-13850312 None:intergenic 40.0%
TGAGTTAAGGGTTAAGGAGT+TGG - chr7.3:13851472-13851491 None:intergenic 40.0%
TGCACATTTCGTTCATTTGG+GGG + chr7.3:13852189-13852208 MS.gene23439:intron 40.0%
TGGATCCTAGTTTGAAAAGG+AGG - chr7.3:13852068-13852087 None:intergenic 40.0%
TGTTGTGTGTGTTAGTGACT+TGG - chr7.3:13850388-13850407 None:intergenic 40.0%
TTCGCAGTCATTGAGTAACA+TGG + chr7.3:13848059-13848078 MS.gene23439:CDS 40.0%
TTCTAAGCGAAATGATTGGC+AGG + chr7.3:13848275-13848294 MS.gene23439:CDS 40.0%
TTGCTCCATATCGAGAAACT+TGG + chr7.3:13849164-13849183 MS.gene23439:intron 40.0%
TTTGGTAGGAGAGTCTTTCA+TGG - chr7.3:13853025-13853044 None:intergenic 40.0%
! ACGGTTTGAGTTAAGGGTTA+AGG - chr7.3:13851478-13851497 None:intergenic 40.0%
! AGCTCAAACGGTTTGAGTTA+AGG - chr7.3:13851485-13851504 None:intergenic 40.0%
! AGGAAATGACTCCTCTAAAG+AGG - chr7.3:13850160-13850179 None:intergenic 40.0%
! ATAAGTTCTAGTGGAGCAGT+TGG + chr7.3:13847943-13847962 MS.gene23439:CDS 40.0%
! ATCTGGTGTTGAGCCATTTA+AGG + chr7.3:13852954-13852973 MS.gene23439:CDS 40.0%
! CATATGTTTTCATCTTCCCC+TGG + chr7.3:13847967-13847986 MS.gene23439:CDS 40.0%
! CGAAGAGAGTCAAAGAGTTT+TGG + chr7.3:13849467-13849486 MS.gene23439:intron 40.0%
! GAAATGACTCCTCTAAAGAG+GGG - chr7.3:13850158-13850177 None:intergenic 40.0%
! GACGTTTTTCTTCTTGACCA+TGG - chr7.3:13850561-13850580 None:intergenic 40.0%
! GCTCAAACGGTTTGAGTTAA+GGG - chr7.3:13851484-13851503 None:intergenic 40.0%
! GCTGATGATGATGCCTTAAA+TGG - chr7.3:13852970-13852989 None:intergenic 40.0%
! GGAAATGACTCCTCTAAAGA+GGG - chr7.3:13850159-13850178 None:intergenic 40.0%
! GGAATGAAACTAGCCTGTAA+AGG + chr7.3:13851607-13851626 MS.gene23439:intron 40.0%
! GTACTACCATTAGCTTGATC+AGG - chr7.3:13853090-13853109 None:intergenic 40.0%
! GTTGATGTTGTAGAAGGTAC+CGG - chr7.3:13848120-13848139 None:intergenic 40.0%
! GTTTGTTTCTTCTTGGGTCA+TGG + chr7.3:13852683-13852702 MS.gene23439:intron 40.0%
! TAAGTTCTAGTGGAGCAGTT+GGG + chr7.3:13847944-13847963 MS.gene23439:CDS 40.0%
! TATCGTCATCACTGATTAGC+TGG - chr7.3:13848311-13848330 None:intergenic 40.0%
! TCATCTTCACAATTTTCGGC+AGG + chr7.3:13848508-13848527 MS.gene23439:CDS 40.0%
! TCTAAAATAGCGTGCTTTGC+TGG + chr7.3:13852101-13852120 MS.gene23439:intron 40.0%
! TGACAGTGGTATTGAGATCA+CGG + chr7.3:13851147-13851166 MS.gene23439:intron 40.0%
! TGATTTTCTCCAGATAGAGC+TGG - chr7.3:13848562-13848581 None:intergenic 40.0%
!! AGAAGCTTGTTGAGATTTGG+AGG - chr7.3:13853157-13853176 None:intergenic 40.0%
!! CACTCCAGATGGATTTTCAA+TGG - chr7.3:13852992-13853011 None:intergenic 40.0%
!! CATTTTGTTTCTTTAGGCGG+TGG + chr7.3:13848471-13848490 MS.gene23439:intron 40.0%
!! TGACTTGCAATGGTCCATTT+TGG - chr7.3:13853064-13853083 None:intergenic 40.0%
!!! AGCTTTTGAAACTGGACATG+TGG + chr7.3:13850256-13850275 MS.gene23439:intron 40.0%
!!! TAGTTTTTTTCCTCCTTGCC+AGG + chr7.3:13851429-13851448 MS.gene23439:intron 40.0%
!!! TTTTTTCCCCTTCTGGAATC+AGG + chr7.3:13852632-13852651 MS.gene23439:intron 40.0%
AAAGTGAGGAGACTACGACT+TGG - chr7.3:13851925-13851944 None:intergenic 45.0%
AACACAGTGTCTTAGTGGCA+AGG + chr7.3:13851690-13851709 MS.gene23439:intron 45.0%
AACCACAACAACCAAGCCTT+GGG - chr7.3:13851040-13851059 None:intergenic 45.0%
AAGTGAGGAGACTACGACTT+GGG - chr7.3:13851924-13851943 None:intergenic 45.0%
AATCAGTGGGTAGGTATCCA+TGG + chr7.3:13850541-13850560 MS.gene23439:intron 45.0%
AATCTAACACAAAAGGGGGG+GGG - chr7.3:13852863-13852882 None:intergenic 45.0%
ACATAGGATGAGGAGACCAT+TGG + chr7.3:13849050-13849069 MS.gene23439:intron 45.0%
AGGCTGTCAATCAACTTGGT+GGG + chr7.3:13848671-13848690 MS.gene23439:CDS 45.0%
ATCTGTCCTTTGACGCTTAG+GGG - chr7.3:13853220-13853239 None:intergenic 45.0%
ATTCACACTAGTTGGGGAGT+TGG - chr7.3:13851510-13851529 None:intergenic 45.0%
CAACAACTTCCAGCTCTATC+TGG + chr7.3:13848550-13848569 MS.gene23439:CDS 45.0%
CAGATAGAGCTGGAAGTTGT+TGG - chr7.3:13848552-13848571 None:intergenic 45.0%
CAGTTGCGAATAGAAGAGCA+AGG + chr7.3:13852895-13852914 MS.gene23439:CDS 45.0%
CATCTGTCCTTTGACGCTTA+GGG - chr7.3:13853221-13853240 None:intergenic 45.0%
CCAATGGAAACAGTGCTTCA+TGG + chr7.3:13848148-13848167 MS.gene23439:CDS 45.0%
CCTTACATGAGGACAGTGAA+GGG - chr7.3:13849350-13849369 None:intergenic 45.0%
CCTTCACTGTCCTCATGTAA+GGG + chr7.3:13849348-13849367 MS.gene23439:intron 45.0%
CTAACTCTGAATCAGTGGGT+AGG + chr7.3:13850532-13850551 MS.gene23439:intron 45.0%
GAATCTAACACAAAAGGGGG+GGG - chr7.3:13852864-13852883 None:intergenic 45.0%
GACAGTGAAGGGACAAAGAA+AGG - chr7.3:13849339-13849358 None:intergenic 45.0%
GAGGAACAAGTGAAATGCCT+TGG - chr7.3:13852800-13852819 None:intergenic 45.0%
GCCCAGCAACTGAATAACAT+AGG + chr7.3:13847784-13847803 MS.gene23439:CDS 45.0%
GCTGCGAATCAGAAAATCTG+GGG - chr7.3:13847870-13847889 None:intergenic 45.0%
GCTTCTCAAACATCATCTGG+AGG - chr7.3:13852927-13852946 None:intergenic 45.0%
GGCTGCGAATCAGAAAATCT+GGG - chr7.3:13847871-13847890 None:intergenic 45.0%
GTTAAGGGTTAAGGAGTTGG+AGG - chr7.3:13851469-13851488 None:intergenic 45.0%
TAATGGTAGTACCACGGTTG+AGG + chr7.3:13853098-13853117 MS.gene23439:CDS 45.0%
TCACATGCATGAACTGTCCA+AGG + chr7.3:13852780-13852799 MS.gene23439:intron 45.0%
TCAGGACCTGATCAAGCTAA+TGG + chr7.3:13853081-13853100 MS.gene23439:CDS 45.0%
TCATCTGTCCTTTGACGCTT+AGG - chr7.3:13853222-13853241 None:intergenic 45.0%
TGAATACTGTTGGCAGGAGT+TGG + chr7.3:13849708-13849727 MS.gene23439:intron 45.0%
TTCACACTAGTTGGGGAGTT+GGG - chr7.3:13851509-13851528 None:intergenic 45.0%
! AAGGGGGAGATGCATTTTAG+AGG + chr7.3:13849949-13849968 MS.gene23439:intron 45.0%
! AGGGGGAGATGCATTTTAGA+GGG + chr7.3:13849950-13849969 MS.gene23439:intron 45.0%
! ATGTAAGCTTTTGGTCCCCA+AGG + chr7.3:13851021-13851040 MS.gene23439:intron 45.0%
! TATGTCTCCTCTAAGGGTGT+TGG - chr7.3:13847847-13847866 None:intergenic 45.0%
!! CCATGAAGCACTGTTTCCAT+TGG - chr7.3:13848151-13848170 None:intergenic 45.0%
!! GCAGAATTTGCTGAGGAAGA+TGG - chr7.3:13848598-13848617 None:intergenic 45.0%
!! TGGAAGTTGTTGGTGACCTT+GGG - chr7.3:13848542-13848561 None:intergenic 45.0%
ACAAATGCCTCGTGAAGCTC+AGG - chr7.3:13848649-13848668 None:intergenic 50.0%
ACCACAACAACCAAGCCTTG+GGG - chr7.3:13851039-13851058 None:intergenic 50.0%
AGCGAAATGATTGGCAGGAG+TGG + chr7.3:13848280-13848299 MS.gene23439:CDS 50.0%
AGTGAGGAGACTACGACTTG+GGG - chr7.3:13851923-13851942 None:intergenic 50.0%
ATCTAACACAAAAGGGGGGG+GGG - chr7.3:13852862-13852881 None:intergenic 50.0%
ATGAGCTTCAGCACACCCTT+AGG - chr7.3:13848799-13848818 None:intergenic 50.0%
CAACCACAACAACCAAGCCT+TGG - chr7.3:13851041-13851060 None:intergenic 50.0%
CATCAGCTACCTTTGCTCTG+AGG - chr7.3:13852383-13852402 None:intergenic 50.0%
CCCTTACATGAGGACAGTGA+AGG - chr7.3:13849351-13849370 None:intergenic 50.0%
CCCTTCACTGTCCTCATGTA+AGG + chr7.3:13849347-13849366 MS.gene23439:intron 50.0%
CGGCTGCGAATCAGAAAATC+TGG - chr7.3:13847872-13847891 None:intergenic 50.0%
CTCGGTGGCCATAATATTGC+AGG - chr7.3:13848250-13848269 None:intergenic 50.0%
CTGCAATATTATGGCCACCG+AGG + chr7.3:13848248-13848267 MS.gene23439:CDS 50.0%
CTGGGGTATGTCTCCTCTAA+GGG - chr7.3:13847853-13847872 None:intergenic 50.0%
CTTGTGGTACCTCAGAGCAA+AGG + chr7.3:13852371-13852390 MS.gene23439:intron 50.0%
GAGCGGTGCCTGCAATATTA+TGG + chr7.3:13848239-13848258 MS.gene23439:CDS 50.0%
GAGGCTGTCAATCAACTTGG+TGG + chr7.3:13848670-13848689 MS.gene23439:CDS 50.0%
GCGAAATGATTGGCAGGAGT+GGG + chr7.3:13848281-13848300 MS.gene23439:CDS 50.0%
GCTCCCTGTCTCACATTAAG+TGG + chr7.3:13851717-13851736 MS.gene23439:intron 50.0%
GGATGGACAGACAACGATGA+AGG - chr7.3:13847826-13847845 None:intergenic 50.0%
GTGGAGGCTGTCAATCAACT+TGG + chr7.3:13848667-13848686 MS.gene23439:CDS 50.0%
GTGTCAGAAGACACTCCAGA+TGG - chr7.3:13853003-13853022 None:intergenic 50.0%
GTTAAGGAGTTGGAGGTCCA+GGG - chr7.3:13851462-13851481 None:intergenic 50.0%
TCGCTTAGAAAACTCCTCGG+TGG - chr7.3:13848265-13848284 None:intergenic 50.0%
TCTACAGGAGCTACCCCTAA+GGG + chr7.3:13848781-13848800 MS.gene23439:intron 50.0%
TGAGCTTCAGCACACCCTTA+GGG - chr7.3:13848798-13848817 None:intergenic 50.0%
TGCAGATGGAGGTCCAGAAA+CGG + chr7.3:13851182-13851201 MS.gene23439:CDS 50.0%
TGCGAATAGAAGAGCAAGGC+AGG + chr7.3:13852899-13852918 MS.gene23439:CDS 50.0%
TGTCCATCCAACACCCTTAG+AGG + chr7.3:13847837-13847856 MS.gene23439:CDS 50.0%
TTCTACAGGAGCTACCCCTA+AGG + chr7.3:13848780-13848799 MS.gene23439:intron 50.0%
TTTGACGCTTAGGGGCTTGA+GGG - chr7.3:13853212-13853231 None:intergenic 50.0%
! GATCAGGTCCTGACTTGCAA+TGG - chr7.3:13853074-13853093 None:intergenic 50.0%
! TCTGGGGTATGTCTCCTCTA+AGG - chr7.3:13847854-13847873 None:intergenic 50.0%
! TGAGCTTCACGAGGCATTTG+TGG + chr7.3:13848648-13848667 MS.gene23439:CDS 50.0%
! TGATTCGCAGCCGACTTATG+TGG + chr7.3:13847879-13847898 MS.gene23439:CDS 50.0%
!! CTGGAAGTTGTTGGTGACCT+TGG - chr7.3:13848543-13848562 None:intergenic 50.0%
!! GGCTGTTGCAGAATTTGCTG+AGG - chr7.3:13848605-13848624 None:intergenic 50.0%
!! GTTGTTGGTGACCTTGGGAT+TGG - chr7.3:13848537-13848556 None:intergenic 50.0%
!! TCTCCTCTAAGGGTGTTGGA+TGG - chr7.3:13847843-13847862 None:intergenic 50.0%
ACGGCTGCATGAACAGCTTG+AGG + chr7.3:13851201-13851220 MS.gene23439:CDS 55.0%
ACTAGGAACAGGCCCCAACT+AGG - chr7.3:13850784-13850803 None:intergenic 55.0%
AGCTCTACGACTGCAGATGG+AGG + chr7.3:13851171-13851190 MS.gene23439:CDS 55.0%
AGTCCATCGCATTCGTGGCT+TGG - chr7.3:13848626-13848645 None:intergenic 55.0%
ATGGACTCCTGAGCTTCACG+AGG + chr7.3:13848639-13848658 MS.gene23439:CDS 55.0%
CTCAAGCCCCTAAGCGTCAA+AGG + chr7.3:13853211-13853230 MS.gene23439:CDS 55.0%
CTTTGACGCTTAGGGGCTTG+AGG - chr7.3:13853213-13853232 None:intergenic 55.0%
GAGCTTCAGCACACCCTTAG+GGG - chr7.3:13848797-13848816 None:intergenic 55.0%
GCTGGAAGCAGTTGAGAAGC+TGG + chr7.3:13853128-13853147 MS.gene23439:CDS 55.0%
GCTGTTCATGCAGCCGTTTC+TGG - chr7.3:13851198-13851217 None:intergenic 55.0%
GGAAGCTCTACGACTGCAGA+TGG + chr7.3:13851168-13851187 MS.gene23439:CDS 55.0%
GGGGAGTTGGGTAGCTCAAA+CGG - chr7.3:13851497-13851516 None:intergenic 55.0%
GGTTAAGGAGTTGGAGGTCC+AGG - chr7.3:13851463-13851482 None:intergenic 55.0%
TCAGGAGTCCATCGCATTCG+TGG - chr7.3:13848631-13848650 None:intergenic 55.0%
TCGCTCGTCTCTCTTTGCTG+TGG + chr7.3:13852435-13852454 MS.gene23439:intron 55.0%
! AGCTTTTGGTCCCCAAGGCT+TGG + chr7.3:13851026-13851045 MS.gene23439:intron 55.0%
! GCTTCACGAGGCATTTGTGG+AGG + chr7.3:13848651-13848670 MS.gene23439:CDS 55.0%
! TCCCCAAGGCTTGGTTGTTG+TGG + chr7.3:13851035-13851054 MS.gene23439:intron 55.0%
ACTTGGGGCTGGAGATGCTG+AGG - chr7.3:13851908-13851927 None:intergenic 60.0%
CACGGTTGAGGAAAGCTCGC+TGG + chr7.3:13853110-13853129 MS.gene23439:CDS 60.0%
CAGCCAAGCCACGAATGCGA+TGG + chr7.3:13848620-13848639 MS.gene23439:CDS 60.0%
CAGCGAGCTTTCCTCAACCG+TGG - chr7.3:13853112-13853131 None:intergenic 60.0%
CCAGGGTTCAAGTCCTGGCA+AGG - chr7.3:13851445-13851464 None:intergenic 60.0%
CCTTGCCAGGACTTGAACCC+TGG + chr7.3:13851442-13851461 MS.gene23439:intron 60.0%
GAGGTCCAGGGTTCAAGTCC+TGG - chr7.3:13851450-13851469 None:intergenic 60.0%
GGGTTCAAGTCCTGGCAAGG+AGG - chr7.3:13851442-13851461 None:intergenic 60.0%
TCGGCAGGACACCAATCCCA+AGG + chr7.3:13848523-13848542 MS.gene23439:CDS 60.0%
! AGGAGACTACGACTTGGGGC+TGG - chr7.3:13851919-13851938 None:intergenic 60.0%
! TGCAGGCACCGCTCTCTACT+TGG - chr7.3:13848233-13848252 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 13847745 13853245 13847745 ID=MS.gene23439
chr7.3 mRNA 13847745 13853245 13847745 ID=MS.gene23439.t1;Parent=MS.gene23439
chr7.3 exon 13847745 13848389 13847745 ID=MS.gene23439.t1.exon1;Parent=MS.gene23439.t1
chr7.3 CDS 13847745 13848389 13847745 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
chr7.3 exon 13848487 13848700 13848487 ID=MS.gene23439.t1.exon2;Parent=MS.gene23439.t1
chr7.3 CDS 13848487 13848700 13848487 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
chr7.3 exon 13848788 13848864 13848788 ID=MS.gene23439.t1.exon3;Parent=MS.gene23439.t1
chr7.3 CDS 13848788 13848864 13848788 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
chr7.3 exon 13848945 13848984 13848945 ID=MS.gene23439.t1.exon4;Parent=MS.gene23439.t1
chr7.3 CDS 13848945 13848984 13848945 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
chr7.3 exon 13849724 13849781 13849724 ID=MS.gene23439.t1.exon5;Parent=MS.gene23439.t1
chr7.3 CDS 13849724 13849781 13849724 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
chr7.3 exon 13851153 13851222 13851153 ID=MS.gene23439.t1.exon6;Parent=MS.gene23439.t1
chr7.3 CDS 13851153 13851222 13851153 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
chr7.3 exon 13852880 13853245 13852880 ID=MS.gene23439.t1.exon7;Parent=MS.gene23439.t1
chr7.3 CDS 13852880 13853245 13852880 ID=cds.MS.gene23439.t1;Parent=MS.gene23439.t1
Gene Sequence

>MS.gene23439

ATGGAAGCTCGTCCTGCTTTCTCAATTGAAAGATCAAGTGCCCAGCAACTGAATAACATAGGGATGTCTGGAGCACTTCCTTCATCGTTGTCTGTCCATCCAACACCCTTAGAGGAGACATACCCCAGATTTTCTGATTCGCAGCCGACTTATGTGGAAAAAGATCTTAAGACAAAAACTTTTAATCATTCAAGTCATATAAGTTCTAGTGGAGCAGTTGGGCATATGTTTTCATCTTCCCCTGGATATTCTAACGATCTTCATCACTCATCCCTTTCACCTCATGAAAAACACTCTAGAAGTGCTCATTTTATTTCGCAGTCATTGAGTAACATGGCTTCGGTGCCATTACCGTATTCTTCAAATAATGGACCGGTACCTTCTACAACATCAACACATTATTCCAATGGAAACAGTGCTTCATGGCATGCAGATCCCCTGCCTAGTTTTCTTGATTTCTCTGCAAATGCCTCAATTGATAATAACCAAGTAGAGAGCGGTGCCTGCAATATTATGGCCACCGAGGAGTTTTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGACGATACTTTGACTTCTAATTGGAATGATCTTCTTGCTGATAATATTCAAGATCTTGAGCCAAAGGTTAAGGTTTTCATTACTCAAATCAGTATTAGCTTGCAGAGTAAATGAATAGCAATTTATTTAAGAAACATGTTGGGAACTCATTTTGTTTCTTTAGGCGGTGGAATCCATTTCAAAGTCATCTTCACAATTTTCGGCAGGACACCAATCCCAAGGTCACCAACAACTTCCAGCTCTATCTGGAGAAAATCATGTTGGTGTTGCTCCATCTTCCTCAGCAAATTCTGCAACAGCCAAGCCACGAATGCGATGGACTCCTGAGCTTCACGAGGCATTTGTGGAGGCTGTCAATCAACTTGGTGGGAGTGAAAGTATGTCTATCTCTTTCTCACTCCAAAGTAAGATCTTAATTCTTTAAACTTCTGCCTCAATTATTTTTTATGTGCTTCTTTCTACAGGAGCTACCCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTACAGGTATGTACCATTTGCTTTATCTTCCAAGGATTGTTTCCTTGAATGCTTATATTCAAATATGTTGCTTCAACGAAATGCAGAAATACAGGACAGCTAGATATAGACCAGAGTCATCTGAAGGTACATAAGATATGCATTGTATTATAATGCCTTTTGCATGGACAAATTTTTGCATATTAGTTAGGACATAGGATGAGGAGACCATTGGCTATTAAATTTTTACCTGTAAAGTTTGCTGTAGAATTGCCTTTATTAAGTAGATGGCTCTTGTCAGATTTTCTGTTAATTGGAAACTTACTTTGCTCCATATCGAGAAACTTGGAATTTACGTCAAGTATGCTTTTCGAACATGAGAACATATGTAAAAAAGAATTTGAATGGCGCAAGTGTGTGAAGTCTTAAATTGTTGTCTATGGCTCTTAGCCCTTTGTATACAATATTTTGGTTATCTGTTTTCTTAAGACATTTTTTCCTTTCTTTGTCCCTTCACTGTCCTCATGTAAGGGTAAACCATTTTTGAGAAAATGATTTCCATTGAATTTTAACTACTGCGTAATTAGTTGGGAAATTGCTAAATATAAATCATCTCTTTATATGAAATCCGAAGAGAGTCAAAGAGTTTTGGATTTTCAAATAATTAGTTAAGTATTAACTATAATTTCCTTTAGTCTAATCTTTTATTAGATTTGCGTATTGGAGATATTATGATACCTAACAGTGAACTTTTTTATTGACCGGGTTTTGTGCATTTGATGTTTCTAAGTAGTGTGTCTTTATTATCTTCCTTGAAATATAGAGTAATGCTCCTTATTTGTGTAATTAATTACATGATTTACAATTTGTTGAATACTGTTGGCAGGAGTTGGAGAGAAAAAACTAAGCCCCATTGAAGATATTTCGTCTCTAGATTTGAAAACGTAAGTGAACTATCGACTTTTATTTGATGCTAACCTCTATTTTGTTATGTATTGTTGTATTTCTAGGAATATTGATACATCAATTTCTTAGACAACATTTTGGTTCTCTAATATGACTTTGCTAATACAAATATTCAAATTTTAAATATCTATATTTGACTTCTTTAAAGGGGGAGATGCATTTTAGAGGGTAAAGTGAAGAGCGATAAATGTTGATTAGAAATAAGAGATTATGATAAAATATATGCATGTGCATTTAAAACGGTAAAGTTGTTAAAATCTAGACCATTTTTTTTCCAATGAACTGTTATAACTTTGCAACAGTAGGTAACATATTTGGTTTTGTTGTAGTGGGTTAGATGAGTAAATTGCACCCCTCTTTAGAGGAGTCATTTCCTAAATGTTTTATATGCTGTTCCCGAGCTTTTACCAACATCTAATCTAATCAATCAATCTAAAGGTAAAAGAGAATGTAGCTTTTGAAACTGGACATGTGGACAGACGTTTTCCATTCATCATTGATGTCGGTCATTTGTTTTGTTTGAAGGGAAAAAGTTGCATGTCCAATTATCCTAGCTAGTAATATCATTCTAGAGATTGACACCAAGTCACTAACACACACAACACTGACATGTAAACTTGCATAGAAATTAGCGCCGTAAAGTTATCTCATCTGCTGGCATTATGAAAGATACTGATTCAGGTATCAAGACTAACCGAAAGAAAATAGAAAATCTTACCCACCATCTTCTAACTCTGAATCAGTGGGTAGGTATCCATGGTCAAGAAGAAAAACGTCTTACAGTGGTATCTTTTCTAGGAATTCAAGAGCCTGAACTGTGTCAAGAACAAAAATATATCTAATAATCAACTAACTGCCTTCTCTTACATTCTATGTCTCTATTTATAAAAGGATGACTAGTAACTACTACAACGACTCTCAACTACTACAACGACTCTCTTGACAAGCCTGCTCTAATTAAAAATGTCTAACTAATTCCTAGTTGGGGCCTGTTCCTAGTAATTATGCATATATCATCTGTTAATCTGATAAGGTAACAGATAAACAAAAAATTATGGGTGTTTTCAAGATTGGATACTATGAGTAAAATGCTAGAAAAGTAGGATTTTAAGATAATCCATCAATAAAGTCTACAGCAAGGTTCTAAGTTATATGGATCAGGAAGGTACTTTTTGATAGCAATGCATCAATGCAGATTAAATATTTTTTATGTCTCTATGTAAGCTTTTGGTCCCCAAGGCTTGGTTGTTGTGGTTGTTGTGTGTAAGCTTTTTGGTCATATTTCATACACAGTAACACAGACATGAATAGTGATTGGTATACTGACTTAACCATTGCATCATTGACAGTGGTATTGAGATCACGGAAGCTCTACGACTGCAGATGGAGGTCCAGAAACGGCTGCATGAACAGCTTGAGGTTTGAATTTATTCTTTTTGTGAATTTTCTTCTGATATGCTCATTTGATTGTTAAAAGATTAGAAATGTGACTTGAAGACTTGTAAGCAAGCTCTATTTTTGTTGCAATTGCCATGACTTTTAGAAATTTATCATCTATAACTTAATGGAATTAGTGTGAATAATCGTTTTTTTAATGGCAAATGTTAGTATGTTAATTGTTATGGTAGTTTTTTTCCTCCTTGCCAGGACTTGAACCCTGGACCTCCAACTCCTTAACCCTTAACTCAAACCGTTTGAGCTACCCAACTCCCCAACTAGTGTGAATAAAATACTTTTAGGATTTACTCGGATTATCTACTTCAACTGGTGTTTCTGAGCTTAGTGAATAAATTCAAGGAAAATGGAATGAAACTAGCCTGTAAAGGAAGTAGAATAATATTCGGTACTTCTGTTCGTTTTTTAATAAAAAAACGGGTAGTTGTCTAAACACAGTGTCTTAGTGGCAAGGTTATGCTCCCTGTCTCACATTAAGTGGTGTTTAAGGTTTTTTCAGAAGAATCTATAAAAGCAATAAATAAGTGGATGGTTGTAACAATTTTACTAAATCATCGTTATTAACTATTGTCCTAAATGCATAGTCAATTTACATAATAGAACTGGCTATTTTGCTTTTGCATTTTAACAAAATAATTTTGAATAGCCTCAGCATCTCCAGCCCCAAGTCGTAGTCTCCTCACTTTATCTATATAGTTTCTACAGTCCTTTTCACCAAATATCATATTCTCATAACCATTTGCTTCAACAAGCAATGATCGAAAATTTCTGCTTACATTTATTCCAGCTTGATCATTGAGTTTTAACCTCCTTTTCAAACTAGGATCCAAAATCTTACTACTTCTAAAATAGCGTGCTTTGCTGGGGCTTATTAGATCATGATTATGCTCAAGAAATATTTTCTTAATAAGTATAATGATTTGAAAGTAATGCACATTTCGTTCATTTGGGGGAGTAACTAAAAAACTTAAAATTAAGTTTTATTGAAAAAATAAAATGTCACTTAATCTGGGAGCATCTTTACAGTTTAATACATGATAAGTTTAACATGCATTACAAAAATATGAACATCTTTGCAGTCATTAGATTAGTGTCATGTATAATTGTAGATACTTGTGGTACCTCAGAGCAAAGGTAGCTGATGTTGATTCTCTTTGTGCACTTATCAATTGAAATTCGCTCGTCTCTCTTTGCTGTGGAGTATGAATTAAAAATGAGATACTAACCATAAAGATAACATTTTGTCAAAAAAAACATCATAAAGATAACATGTTAATTTATAGTTGATGCCCATTCCTTGATTTGTAAAAGAGAATGATCTATCCTCTTCAAGACATTTTTTTTTGCAAAAAATCTAAGCCTTAAATATTTTCTTTTTTCCCCTTCTGGAATCAGGACATTTTTGGATAAACTGATTAGGATTTGTTTGTTTCTTCTTGGGTCATGGAATTAACTTCCGTAATATTGTTTGAAATGTAGCTTTATGCATATGGCATTTAGGGTTATGTTGCTTCTGTCACGTCACATGCATGAACTGTCCAAGGCATTTCACTTGTTCCTCTTATAGTTGTCATGCCTTTTCAGATGATCTGATACAGCTCCCCCCCCCCTTTTGTGTTAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAGCAAGGCAGGTACCTCCAGATGATGTTTGAGAAGCAATGCAAATCTGGTGTTGAGCCATTTAAGGCATCATCATCAGCCATTGAAAATCCATCTGGAGTGTCTTCTGACACCATGAAAGACTCTCCTACCAAAAATGAATTGGAAGCATCCAAAATGGACCATTGCAAGTCAGGACCTGATCAAGCTAATGGTAGTACCACGGTTGAGGAAAGCTCGCTGGAAGCAGTTGAGAAGCTGGATACCTCCAAATCTCAACAAGCTTCTAAGGATCTTGAGCAAAATGAAAATGAAGATAGCCCTCAAGCCCCTAAGCGTCAAAGGACAGATGAGTAA
Protein sequence

>MS.gene23439.t1

MEARPAFSIERSSAQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTKTFNHSSHISSSGAVGHMFSSSPGYSNDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLPYSSNNGPVPSTTSTHYSNGNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEFSKRNDWQEWADQLISDDDTLTSNWNDLLADNIQDLEPKAVESISKSSSQFSAGHQSQGHQQLPALSGENHVGVAPSSSANSATAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSPTKNELEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLEQNENEDSPQAPKRQRTDE