AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23593

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23593.t1 MTR_1g050438 81.707 164 25 2 1 164 223 381 2.29e-90 280
MS.gene23593.t1 MTR_1g050438 66.452 155 46 3 107 257 437 589 4.86e-46 163
MS.gene23593.t1 MTR_0728s0020 81.707 164 25 2 1 164 239 397 7.70e-90 280
MS.gene23593.t1 MTR_0728s0020 63.580 162 53 3 107 264 453 612 6.43e-46 163
MS.gene23593.t1 MTR_3g029590 71.724 145 41 0 1 145 259 403 1.01e-70 232
MS.gene23593.t1 MTR_3g029590 51.948 154 62 5 112 258 491 639 1.33e-29 118
MS.gene23593.t1 MTR_7g092070 67.516 157 49 1 1 157 259 413 2.58e-67 223
MS.gene23593.t1 MTR_7g092070 50.427 117 51 5 143 254 516 630 1.33e-17 83.2
MS.gene23593.t1 MTR_3g435680 66.901 142 47 0 1 142 146 287 1.77e-65 210
MS.gene23593.t1 MTR_5g071070 61.379 145 56 0 1 145 143 287 1.22e-60 203
MS.gene23593.t1 MTR_5g071070 60.403 149 59 0 1 149 225 373 7.80e-60 202
MS.gene23593.t1 MTR_3g435590 57.962 157 55 2 1 157 233 378 1.33e-58 194
MS.gene23593.t1 MTR_5g082830 68.462 130 40 1 1 129 212 341 2.08e-58 198
MS.gene23593.t1 MTR_1g075890 70.833 120 35 0 1 120 224 343 7.07e-58 196
MS.gene23593.t1 MTR_3g070880 65.041 123 43 0 1 123 158 280 2.47e-54 184
MS.gene23593.t1 MTR_8g102100 58.197 122 51 0 2 123 77 198 1.28e-49 169
MS.gene23593.t1 MTR_6g090380 63.551 107 39 0 2 108 99 205 1.20e-48 166
MS.gene23593.t1 MTR_2g090605 60.909 110 43 0 7 116 78 187 1.43e-46 161
MS.gene23593.t1 MTR_3g103960 59.633 109 43 1 1 108 48 156 3.24e-46 157
MS.gene23593.t1 MTR_4g078660 55.140 107 48 0 2 108 56 162 9.92e-43 149
MS.gene23593.t1 MTR_3g464270 52.586 116 54 1 5 119 8 123 1.41e-37 136
MS.gene23593.t1 MTR_3g464260 52.500 120 32 1 1 120 201 295 6.98e-35 132
MS.gene23593.t1 MTR_3g464290 58.750 80 32 1 1 79 95 174 2.63e-28 113
MS.gene23593.t1 MTR_3g464280 43.590 117 32 1 1 117 183 265 9.89e-23 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23593.t1 AT2G41900 62.637 182 51 3 1 182 256 420 6.03e-69 227
MS.gene23593.t1 AT5G12850 61.635 159 60 1 1 158 252 410 1.33e-66 220
MS.gene23593.t1 AT5G12850 45.238 126 41 7 141 254 500 609 5.90e-14 72.4
MS.gene23593.t1 AT5G58620 71.311 122 35 0 1 122 204 325 5.05e-60 201
MS.gene23593.t1 AT2G40140 54.023 174 76 3 1 173 209 379 1.68e-56 191
MS.gene23593.t1 AT2G40140 54.023 174 76 3 1 173 209 379 1.68e-56 191
MS.gene23593.t1 AT3G55980 51.977 177 76 2 1 173 206 377 1.79e-56 191
MS.gene23593.t1 AT3G55980 51.977 177 76 2 1 173 273 444 4.77e-56 191
MS.gene23593.t1 AT2G25900 62.727 110 41 0 2 111 86 195 2.50e-51 171
MS.gene23593.t1 AT2G25900 62.727 110 41 0 2 111 86 195 2.50e-51 171
MS.gene23593.t1 AT1G03790 62.712 118 43 1 2 118 78 195 4.28e-49 167
MS.gene23593.t1 AT2G19810 58.333 120 50 0 2 121 74 193 1.59e-48 165
MS.gene23593.t1 AT4G29190 47.674 172 83 2 2 167 75 245 3.36e-48 164
MS.gene23593.t1 AT5G07500 60.185 108 43 0 1 108 47 154 8.39e-45 152
MS.gene23593.t1 AT5G44260 60.360 111 43 1 2 111 56 166 1.53e-44 155

Find 81 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACCGAGCAAGGGATTT+TGG 0.190868 8.4:-60755162 None:intergenic
TGCGAACCCATGGTCTTATT+TGG 0.198433 8.4:+60755193 MS.gene23593:CDS
GCGTGCCTTGCCCTGAATTT+AGG 0.210124 8.4:+60754473 MS.gene23593:CDS
AGACGATGCTCAACATTCTT+TGG 0.265013 8.4:-60754987 None:intergenic
GAGATTGGTTCAATACTTCT+AGG 0.306724 8.4:-60755053 None:intergenic
CAAGCCTCTTTCCTAAATTC+AGG 0.309020 8.4:-60754484 None:intergenic
CTCCTCCGAGCATTCTCTCC+TGG 0.324682 8.4:-60754424 None:intergenic
TTCTCTCCTGGGTGCACATA+TGG 0.332799 8.4:-60754412 None:intergenic
GGGGACTAGTTGTGATAAAA+AGG 0.333459 8.4:+60754594 MS.gene23593:CDS
AATTTAGGAAAGAGGCTTGT+AGG 0.339756 8.4:+60754488 MS.gene23593:CDS
AACTGCAGAGTGTTAGTTCT+AGG 0.352641 8.4:+60755129 MS.gene23593:CDS
GCGAACCCATGGTCTTATTT+GGG 0.360422 8.4:+60755194 MS.gene23593:CDS
TCCTCCGAGCATTCTCTCCT+GGG 0.362088 8.4:-60754423 None:intergenic
AAAATCCCTTGCTCGGTTGT+TGG 0.380574 8.4:+60755164 MS.gene23593:CDS
TGTTGCTGCAATGAATCTTT+TGG 0.385242 8.4:+60754726 MS.gene23593:CDS
CGTCTGTCACAGGCTTCATT+TGG 0.399560 8.4:+60755005 MS.gene23593:CDS
TGAGGGCTCATTGAGGAGAT+TGG 0.413555 8.4:-60755068 None:intergenic
CTGCCTTCGTTAACTAGATC+TGG 0.435802 8.4:+60754655 MS.gene23593:CDS
ATGCTCGGAGGAGGGACCTT+AGG 0.439498 8.4:+60754434 MS.gene23593:CDS
GGATTCCTTCAGTAGGAGTT+GGG 0.443254 8.4:-60755302 None:intergenic
TGTATGCAAGTGATGAATTT+CGG 0.450722 8.4:+60754329 MS.gene23593:CDS
AGGATTCCTTCAGTAGGAGT+TGG 0.456339 8.4:-60755303 None:intergenic
AAGAAGATCCTGATCTATCA+TGG 0.470613 8.4:+60755278 MS.gene23593:CDS
AAATAAGACCATGGGTTCGC+AGG 0.476771 8.4:-60755191 None:intergenic
CCCGTGCACAATCTCATGAT+TGG 0.480744 8.4:+60754380 MS.gene23593:CDS
AAGCCTCTTTCCTAAATTCA+GGG 0.483169 8.4:-60754483 None:intergenic
GAGGAAATGCATACATTTGA+GGG 0.492219 8.4:-60755085 None:intergenic
TGGTTCCAAAATCCCTTGCT+CGG 0.492563 8.4:+60755157 MS.gene23593:CDS
TGAGGAAATGCATACATTTG+AGG 0.493617 8.4:-60755086 None:intergenic
AGTGTTAGTTCTAGGGAACT+TGG 0.494640 8.4:+60755137 MS.gene23593:CDS
TCGAACACGACTCTGTAAAG+AGG 0.495482 8.4:+60754573 MS.gene23593:CDS
TTGCCCTGAATTTAGGAAAG+AGG 0.495870 8.4:+60754480 MS.gene23593:CDS
GAGAGCATATTAGTATTTGA+AGG 0.495872 8.4:-60754963 None:intergenic
AGTTGGGCCCATGATAGATC+AGG 0.500358 8.4:-60755286 None:intergenic
CATTTAAACATAAAATCAGC+AGG 0.500537 8.4:+60755254 MS.gene23593:CDS
AGGAAAGAGGCTTGTAGGCA+TGG 0.515731 8.4:+60754493 MS.gene23593:CDS
GGGGATCCAACAACCGAGCA+AGG 0.519916 8.4:-60755170 None:intergenic
CTCATGGAATATTCGAGTGT+TGG 0.522534 8.4:+60754533 MS.gene23593:CDS
AATAAGACCATGGGTTCGCA+GGG 0.525066 8.4:-60755190 None:intergenic
TTGGATCCCCTGCGAACCCA+TGG 0.529803 8.4:+60755183 MS.gene23593:CDS
CAGGAGAGAATGCTCGGAGG+AGG 0.532536 8.4:+60754425 MS.gene23593:CDS
CTCGGAGGAGGGACCTTAGG+AGG 0.543437 8.4:+60754437 MS.gene23593:CDS
TGTTGAGCATCGTCTGTCAC+AGG 0.547530 8.4:+60754995 MS.gene23593:CDS
TGCACCCAGGAGAGAATGCT+CGG 0.556534 8.4:+60754419 MS.gene23593:CDS
TCCAATCATGAGATTGTGCA+CGG 0.561774 8.4:-60754381 None:intergenic
TGCTTCTGTTTCTCGCGATG+AGG 0.564411 8.4:-60755104 None:intergenic
CGAACACGACTCTGTAAAGA+GGG 0.566742 8.4:+60754574 MS.gene23593:CDS
AGCAGCTGATTTACGTGAAG+GGG 0.568883 8.4:-60754913 None:intergenic
AGGAGAGAATGCTCGGAGGA+GGG 0.569188 8.4:+60754426 MS.gene23593:CDS
TCTTTCCTAAATTCAGGGCA+AGG 0.573700 8.4:-60754478 None:intergenic
ATAGCAGCTGATTTACGTGA+AGG 0.577910 8.4:-60754915 None:intergenic
GTGGCATGCTACCGCATGAA+GGG 0.581241 8.4:-60755031 None:intergenic
ACTGCAGAGTGTTAGTTCTA+GGG 0.587392 8.4:+60755130 MS.gene23593:CDS
GATAAGTGTGAATATGCTCA+TGG 0.587938 8.4:+60754517 MS.gene23593:CDS
CACACGATGAAAAGGAATTG+AGG 0.588152 8.4:+60754629 MS.gene23593:CDS
TAGCAGCTGATTTACGTGAA+GGG 0.588534 8.4:-60754914 None:intergenic
GAGATCCCAAATAAGACCAT+GGG 0.589905 8.4:-60755199 None:intergenic
AGCTGTAAGAGAACCTCCTA+AGG 0.597117 8.4:-60754450 None:intergenic
CAGGTATTCTGACCCAGCAA+TGG 0.597476 8.4:+60754878 MS.gene23593:intron
AGAGATCCCAAATAAGACCA+TGG 0.598006 8.4:-60755200 None:intergenic
GGTGGCATGCTACCGCATGA+AGG 0.604069 8.4:-60755032 None:intergenic
TCATTTGGTGTCCCTTCATG+CGG 0.606648 8.4:+60755020 MS.gene23593:CDS
GAGGCAGATGAACGTAGTGA+AGG 0.609734 8.4:-60754682 None:intergenic
AGAAGATCCTGATCTATCAT+GGG 0.609835 8.4:+60755279 MS.gene23593:CDS
ATGGGCCCAACTCCTACTGA+AGG 0.612123 8.4:+60755297 MS.gene23593:CDS
GTCCATCGCATTAAAAGCAG+AGG 0.612380 8.4:-60754701 None:intergenic
TAGGTGAGGATTCCTTCAGT+AGG 0.613128 8.4:-60755309 None:intergenic
GATCTAGTTAACGAAGGCAG+TGG 0.618002 8.4:-60754652 None:intergenic
AGTCGTGTTCGATACTGATG+TGG 0.638739 8.4:-60754562 None:intergenic
GGGATCCAACAACCGAGCAA+GGG 0.639525 8.4:-60755169 None:intergenic
CCAATCATGAGATTGTGCAC+GGG 0.643224 8.4:-60754380 None:intergenic
ATTTAAACATAAAATCAGCA+GGG 0.669313 8.4:+60755255 MS.gene23593:CDS
ATTGTGCACGGGAACAACGA+AGG 0.674795 8.4:-60754369 None:intergenic
GTCGTGTTCGATACTGATGT+GGG 0.690047 8.4:-60754561 None:intergenic
GAGTGTCCATATGTGCACCC+AGG 0.695919 8.4:+60754406 MS.gene23593:CDS
ATACATTTGAGGGCTCATTG+AGG 0.695981 8.4:-60755075 None:intergenic
ATTGGTTCAATACTTCTAGG+TGG 0.697515 8.4:-60755050 None:intergenic
ACACCAGATCTAGTTAACGA+AGG 0.718756 8.4:-60754658 None:intergenic
ATAAGACCATGGGTTCGCAG+GGG 0.737580 8.4:-60755189 None:intergenic
GAACACGACTCTGTAAAGAG+GGG 0.748627 8.4:+60754575 MS.gene23593:CDS
ACCCAGGAGAGAATGCTCGG+AGG 0.756453 8.4:+60754422 MS.gene23593:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAACATAAAATCAGCA+GGG + chr8.4:60755255-60755274 MS.gene23593:CDS 20.0%
! CATTTAAACATAAAATCAGC+AGG + chr8.4:60755254-60755273 MS.gene23593:CDS 25.0%
!!! CCATCTAATTTAATTTTTCC+CGG + chr8.4:60754781-60754800 MS.gene23593:intron 25.0%
!!! GCTGATTTTATGTTTAAATG+AGG - chr8.4:60755254-60755273 None:intergenic 25.0%
CCGGGAAAAATTAAATTAGA+TGG - chr8.4:60754784-60754803 None:intergenic 30.0%
TGTATGCAAGTGATGAATTT+CGG + chr8.4:60754329-60754348 MS.gene23593:CDS 30.0%
! ATTTCGGATGTTTTCTTTCA+AGG + chr8.4:60754345-60754364 MS.gene23593:CDS 30.0%
! GAGAGCATATTAGTATTTGA+AGG - chr8.4:60754966-60754985 None:intergenic 30.0%
AAAAAACAGAAGCCATTGCT+GGG - chr8.4:60754893-60754912 None:intergenic 35.0%
AAGAAGATCCTGATCTATCA+TGG + chr8.4:60755278-60755297 MS.gene23593:CDS 35.0%
AAGCCTCTTTCCTAAATTCA+GGG - chr8.4:60754486-60754505 None:intergenic 35.0%
AATTTAGGAAAGAGGCTTGT+AGG + chr8.4:60754488-60754507 MS.gene23593:CDS 35.0%
AGAAGATCCTGATCTATCAT+GGG + chr8.4:60755279-60755298 MS.gene23593:CDS 35.0%
GAGGAAATGCATACATTTGA+GGG - chr8.4:60755088-60755107 None:intergenic 35.0%
GATAAGTGTGAATATGCTCA+TGG + chr8.4:60754517-60754536 MS.gene23593:CDS 35.0%
TGAGGAAATGCATACATTTG+AGG - chr8.4:60755089-60755108 None:intergenic 35.0%
! ATTGGTTCAATACTTCTAGG+TGG - chr8.4:60755053-60755072 None:intergenic 35.0%
! GAGATTGGTTCAATACTTCT+AGG - chr8.4:60755056-60755075 None:intergenic 35.0%
! TGTTGCTGCAATGAATCTTT+TGG + chr8.4:60754726-60754745 MS.gene23593:CDS 35.0%
ACACCAGATCTAGTTAACGA+AGG - chr8.4:60754661-60754680 None:intergenic 40.0%
AGACGATGCTCAACATTCTT+TGG - chr8.4:60754990-60755009 None:intergenic 40.0%
AGAGATCCCAAATAAGACCA+TGG - chr8.4:60755203-60755222 None:intergenic 40.0%
ATACATTTGAGGGCTCATTG+AGG - chr8.4:60755078-60755097 None:intergenic 40.0%
ATGAACGAAAGAGACTAACG+AGG - chr8.4:60754761-60754780 None:intergenic 40.0%
CAAGCCTCTTTCCTAAATTC+AGG - chr8.4:60754487-60754506 None:intergenic 40.0%
CACACGATGAAAAGGAATTG+AGG + chr8.4:60754629-60754648 MS.gene23593:CDS 40.0%
CTCATGGAATATTCGAGTGT+TGG + chr8.4:60754533-60754552 MS.gene23593:CDS 40.0%
GAAAAAACAGAAGCCATTGC+TGG - chr8.4:60754894-60754913 None:intergenic 40.0%
GAGATCCCAAATAAGACCAT+GGG - chr8.4:60755202-60755221 None:intergenic 40.0%
TCCAATCATGAGATTGTGCA+CGG - chr8.4:60754384-60754403 None:intergenic 40.0%
TCTTTCCTAAATTCAGGGCA+AGG - chr8.4:60754481-60754500 None:intergenic 40.0%
TGAACGAAAGAGACTAACGA+GGG - chr8.4:60754760-60754779 None:intergenic 40.0%
TTGCCCTGAATTTAGGAAAG+AGG + chr8.4:60754480-60754499 MS.gene23593:CDS 40.0%
! AACTGCAGAGTGTTAGTTCT+AGG + chr8.4:60755129-60755148 MS.gene23593:CDS 40.0%
! AATGAGATGCCATTTCCAGA+AGG - chr8.4:60754816-60754835 None:intergenic 40.0%
! ATAGCAGCTGATTTACGTGA+AGG - chr8.4:60754918-60754937 None:intergenic 40.0%
! ATGAGATGCCATTTCCAGAA+GGG - chr8.4:60754815-60754834 None:intergenic 40.0%
! CAATTCCTTTTCATCGTGTG+CGG - chr8.4:60754629-60754648 None:intergenic 40.0%
! GCTGCAATGAATCTTTTGGT+CGG + chr8.4:60754730-60754749 MS.gene23593:CDS 40.0%
! TAGCAGCTGATTTACGTGAA+GGG - chr8.4:60754917-60754936 None:intergenic 40.0%
! TTTTTCCGCACACGATGAAA+AGG + chr8.4:60754621-60754640 MS.gene23593:CDS 40.0%
!! ACTGCAGAGTGTTAGTTCTA+GGG + chr8.4:60755130-60755149 MS.gene23593:CDS 40.0%
!! AGTGTTAGTTCTAGGGAACT+TGG + chr8.4:60755137-60755156 MS.gene23593:CDS 40.0%
!! GGGGACTAGTTGTGATAAAA+AGG + chr8.4:60754594-60754613 MS.gene23593:CDS 40.0%
AAAATCCCTTGCTCGGTTGT+TGG + chr8.4:60755164-60755183 MS.gene23593:CDS 45.0%
AAAATGGCATCTCATCTCCC+AGG + chr8.4:60754859-60754878 MS.gene23593:intron 45.0%
AAATAAGACCATGGGTTCGC+AGG - chr8.4:60755194-60755213 None:intergenic 45.0%
AATAAGACCATGGGTTCGCA+GGG - chr8.4:60755193-60755212 None:intergenic 45.0%
AGCTGTAAGAGAACCTCCTA+AGG - chr8.4:60754453-60754472 None:intergenic 45.0%
AGTCGTGTTCGATACTGATG+TGG - chr8.4:60754565-60754584 None:intergenic 45.0%
ATTGCTGGGTCAGAATACCT+GGG - chr8.4:60754879-60754898 None:intergenic 45.0%
CCAATCATGAGATTGTGCAC+GGG - chr8.4:60754383-60754402 None:intergenic 45.0%
CGAACACGACTCTGTAAAGA+GGG + chr8.4:60754574-60754593 MS.gene23593:CDS 45.0%
CTGCCTTCGTTAACTAGATC+TGG + chr8.4:60754655-60754674 MS.gene23593:CDS 45.0%
GAACACGACTCTGTAAAGAG+GGG + chr8.4:60754575-60754594 MS.gene23593:CDS 45.0%
GATCTAGTTAACGAAGGCAG+TGG - chr8.4:60754655-60754674 None:intergenic 45.0%
GCAGCTTGGTCACATCAAAA+TGG + chr8.4:60754843-60754862 MS.gene23593:intron 45.0%
GTCCATCGCATTAAAAGCAG+AGG - chr8.4:60754704-60754723 None:intergenic 45.0%
GTCGTGTTCGATACTGATGT+GGG - chr8.4:60754564-60754583 None:intergenic 45.0%
TCGAACACGACTCTGTAAAG+AGG + chr8.4:60754573-60754592 MS.gene23593:CDS 45.0%
TCTCATTCTCAAGTGCAGCT+TGG + chr8.4:60754829-60754848 MS.gene23593:intron 45.0%
TGGTTCCAAAATCCCTTGCT+CGG + chr8.4:60755157-60755176 MS.gene23593:CDS 45.0%
! AACAACCGAGCAAGGGATTT+TGG - chr8.4:60755165-60755184 None:intergenic 45.0%
! AGCAGCTGATTTACGTGAAG+GGG - chr8.4:60754916-60754935 None:intergenic 45.0%
! TGAGATGCCATTTCCAGAAG+GGG - chr8.4:60754814-60754833 None:intergenic 45.0%
!! GCGAACCCATGGTCTTATTT+GGG + chr8.4:60755194-60755213 MS.gene23593:CDS 45.0%
!! TCATTTGGTGTCCCTTCATG+CGG + chr8.4:60755020-60755039 MS.gene23593:CDS 45.0%
!! TGCCTCTGCTTTTAATGCGA+TGG + chr8.4:60754699-60754718 MS.gene23593:CDS 45.0%
!! TGCGAACCCATGGTCTTATT+TGG + chr8.4:60755193-60755212 MS.gene23593:CDS 45.0%
AGGAAAGAGGCTTGTAGGCA+TGG + chr8.4:60754493-60754512 MS.gene23593:CDS 50.0%
AGTTGGGCCCATGATAGATC+AGG - chr8.4:60755289-60755308 None:intergenic 50.0%
ATAAGACCATGGGTTCGCAG+GGG - chr8.4:60755192-60755211 None:intergenic 50.0%
ATTGTGCACGGGAACAACGA+AGG - chr8.4:60754372-60754391 None:intergenic 50.0%
CAGGTATTCTGACCCAGCAA+TGG + chr8.4:60754878-60754897 MS.gene23593:intron 50.0%
CATTGCTGGGTCAGAATACC+TGG - chr8.4:60754880-60754899 None:intergenic 50.0%
CCCGTGCACAATCTCATGAT+TGG + chr8.4:60754380-60754399 MS.gene23593:CDS 50.0%
CGTCTGTCACAGGCTTCATT+TGG + chr8.4:60755005-60755024 MS.gene23593:CDS 50.0%
GAGGCAGATGAACGTAGTGA+AGG - chr8.4:60754685-60754704 None:intergenic 50.0%
TGAGGGCTCATTGAGGAGAT+TGG - chr8.4:60755071-60755090 None:intergenic 50.0%
TTCTCTCCTGGGTGCACATA+TGG - chr8.4:60754415-60754434 None:intergenic 50.0%
! GAGATGCCATTTCCAGAAGG+GGG - chr8.4:60754813-60754832 None:intergenic 50.0%
! TGCTTCTGTTTCTCGCGATG+AGG - chr8.4:60755107-60755126 None:intergenic 50.0%
! TGTTGAGCATCGTCTGTCAC+AGG + chr8.4:60754995-60755014 MS.gene23593:CDS 50.0%
AGGAGAGAATGCTCGGAGGA+GGG + chr8.4:60754426-60754445 MS.gene23593:CDS 55.0%
GAGTGTCCATATGTGCACCC+AGG + chr8.4:60754406-60754425 MS.gene23593:CDS 55.0%
GCGTGCCTTGCCCTGAATTT+AGG + chr8.4:60754473-60754492 MS.gene23593:CDS 55.0%
GGGATCCAACAACCGAGCAA+GGG - chr8.4:60755172-60755191 None:intergenic 55.0%
GTGGCATGCTACCGCATGAA+GGG - chr8.4:60755034-60755053 None:intergenic 55.0%
TCCTCCGAGCATTCTCTCCT+GGG - chr8.4:60754426-60754445 None:intergenic 55.0%
TGCACCCAGGAGAGAATGCT+CGG + chr8.4:60754419-60754438 MS.gene23593:CDS 55.0%
! CCATTTCCAGAAGGGGGCAT+AGG - chr8.4:60754807-60754826 None:intergenic 55.0%
! CCTATGCCCCCTTCTGGAAA+TGG + chr8.4:60754804-60754823 MS.gene23593:intron 55.0%
ACCCAGGAGAGAATGCTCGG+AGG + chr8.4:60754422-60754441 MS.gene23593:CDS 60.0%
ATGCTCGGAGGAGGGACCTT+AGG + chr8.4:60754434-60754453 MS.gene23593:CDS 60.0%
CAGGAGAGAATGCTCGGAGG+AGG + chr8.4:60754425-60754444 MS.gene23593:CDS 60.0%
CTCCTCCGAGCATTCTCTCC+TGG - chr8.4:60754427-60754446 None:intergenic 60.0%
GGGGATCCAACAACCGAGCA+AGG - chr8.4:60755173-60755192 None:intergenic 60.0%
GGTGGCATGCTACCGCATGA+AGG - chr8.4:60755035-60755054 None:intergenic 60.0%
TTGGATCCCCTGCGAACCCA+TGG + chr8.4:60755183-60755202 MS.gene23593:CDS 60.0%
! TTCCAGAAGGGGGCATAGGC+CGG - chr8.4:60754803-60754822 None:intergenic 60.0%
CTCGGAGGAGGGACCTTAGG+AGG + chr8.4:60754437-60754456 MS.gene23593:CDS 65.0%
! TCCAGAAGGGGGCATAGGCC+GGG - chr8.4:60754802-60754821 None:intergenic 65.0%
TCCCGGCCTATGCCCCCTTC+TGG + chr8.4:60754798-60754817 MS.gene23593:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 60754328 60755316 60754328 ID=MS.gene23593
chr8.4 mRNA 60754328 60755316 60754328 ID=MS.gene23593.t1;Parent=MS.gene23593
chr8.4 exon 60754328 60754761 60754328 ID=MS.gene23593.t1.exon1;Parent=MS.gene23593.t1
chr8.4 CDS 60754328 60754761 60754328 ID=cds.MS.gene23593.t1;Parent=MS.gene23593.t1
chr8.4 exon 60754881 60755316 60754881 ID=MS.gene23593.t1.exon2;Parent=MS.gene23593.t1
chr8.4 CDS 60754881 60755316 60754881 ID=cds.MS.gene23593.t1;Parent=MS.gene23593.t1
Gene Sequence

>MS.gene23593

ATGTATGCAAGTGATGAATTTCGGATGTTTTCTTTCAAGGTCCTTCGTTGTTCCCGTGCACAATCTCATGATTGGACTGAGTGTCCATATGTGCACCCAGGAGAGAATGCTCGGAGGAGGGACCTTAGGAGGTTCTCTTACAGCTGCGTGCCTTGCCCTGAATTTAGGAAAGAGGCTTGTAGGCATGGAGATAAGTGTGAATATGCTCATGGAATATTCGAGTGTTGGCTACACCCACATCAGTATCGAACACGACTCTGTAAAGAGGGGACTAGTTGTGATAAAAAGGTGTGTTTTTCCGCACACGATGAAAAGGAATTGAGGCCACTGCCTTCGTTAACTAGATCTGGTGTTCCTTCACTACGTTCATCTGCCTCTGCTTTTAATGCGATGGACATTGTTGCTGCAATGAATCTTTTGGTCGGTTCACCCTCGTTAGTCTCTTTCGTTCATCCATCTAATTTAATTTTTCCCGGCCTATGCCCCCTTCTGGAAATGGCATCTCATTCTCAAGTGCAGCTTGGTCACATCAAAATGGCATCTCATCTCCCAGGTATTCTGACCCAGCAATGGCTTCTGTTTTTTCCCCTTCACGTAAATCAGCTGCTATGAATGAGCTTCAAAACATGTTATCGCCTTCAAATACTAATATGCTCTCTCCAAAGAATGTTGAGCATCGTCTGTCACAGGCTTCATTTGGTGTCCCTTCATGCGGTAGCATGCCACCTAGAAGTATTGAACCAATCTCCTCAATGAGCCCTCAAATGTATGCATTTCCTCATCGCGAGAAACAGAAGCAACAACTGCAGAGTGTTAGTTCTAGGGAACTTGGTTCCAAAATCCCTTGCTCGGTTGTTGGATCCCCTGCGAACCCATGGTCTTATTTGGGATCTCTTACTGAGATGTCTTATCGCACAATACATCCTCATTTAAACATAAAATCAGCAGGGAAGAAGATCCTGATCTATCATGGGCCCAACTCCTACTGA
Protein sequence

>MS.gene23593.t1

MYASDEFRMFSFKVLRCSRAQSHDWTECPYVHPGENARRRDLRRFSYSCVPCPEFRKEACRHGDKCEYAHGIFECWLHPHQYRTRLCKEGTSCDKKVCFSAHDEKELRPLPSLTRSGVPSLRSSASAFNAMDIVAAMNLLVGSPSYSDPAMASVFSPSRKSAAMNELQNMLSPSNTNMLSPKNVEHRLSQASFGVPSCGSMPPRSIEPISSMSPQMYAFPHREKQKQQLQSVSSRELGSKIPCSVVGSPANPWSYLGSLTEMSYRTIHPHLNIKSAGKKILIYHGPNSY