AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23615

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23615.t1 MTR_8g033220 98.333 60 1 0 1 60 1 60 2.23e-37 124
MS.gene23615.t1 MTR_8g033220 98.333 60 1 0 1 60 1 60 2.49e-37 124
MS.gene23615.t1 MTR_7g075870 95.000 60 3 0 1 60 1 60 5.51e-37 122
MS.gene23615.t1 MTR_7g075870 95.000 60 3 0 1 60 1 60 5.66e-37 122
MS.gene23615.t1 MTR_4g102530 88.333 60 7 0 1 60 1 60 8.14e-33 112
MS.gene23615.t1 MTR_3g005530 78.333 60 13 0 1 60 1 60 8.52e-29 102
MS.gene23615.t1 MTR_3g452380 78.333 60 13 0 1 60 16 75 1.09e-28 102
MS.gene23615.t1 MTR_2g017865 81.034 58 11 0 3 60 18 75 1.54e-28 102
MS.gene23615.t1 MTR_8g087860 81.034 58 11 0 3 60 19 76 1.96e-28 101
MS.gene23615.t1 MTR_7g016600 69.231 65 20 0 1 65 1 65 3.88e-28 100
MS.gene23615.t1 MTR_8g097090 70.769 65 19 0 1 65 1 65 4.48e-28 100
MS.gene23615.t1 MTR_6g015975 70.769 65 19 0 1 65 1 65 4.91e-28 100
MS.gene23615.t1 MTR_5g046870 74.576 59 15 0 1 59 1 59 5.73e-28 97.1
MS.gene23615.t1 MTR_8g033270 77.966 59 13 0 1 59 1 59 1.75e-27 99.4
MS.gene23615.t1 MTR_7g075850 76.667 60 14 0 1 60 1 60 3.83e-27 98.6
MS.gene23615.t1 MTR_2g461710 71.667 60 17 0 1 60 1 60 5.22e-27 92.8
MS.gene23615.t1 MTR_5g066960 68.852 61 19 0 1 61 1 61 6.20e-27 92.8
MS.gene23615.t1 MTR_4g109810 67.692 65 21 0 1 65 1 65 1.59e-26 96.7
MS.gene23615.t1 MTR_3g084980 70.769 65 19 0 1 65 1 65 2.33e-26 96.3
MS.gene23615.t1 MTR_0003s0590 73.333 60 16 0 1 60 1 60 3.80e-25 93.6
MS.gene23615.t1 MTR_1g053070 71.667 60 17 0 1 60 1 60 8.18e-25 92.4
MS.gene23615.t1 MTR_4g109830 70.000 60 18 0 1 60 1 60 1.14e-24 91.7
MS.gene23615.t1 MTR_4g036050 63.636 66 23 1 1 66 1 65 2.78e-24 89.4
MS.gene23615.t1 MTR_4g036050 63.636 66 23 1 1 66 1 65 2.97e-24 89.7
MS.gene23615.t1 MTR_4g036050 63.636 66 23 1 1 66 1 65 2.97e-24 89.7
MS.gene23615.t1 MTR_1g101970 68.333 60 19 0 1 60 1 60 8.22e-24 88.6
MS.gene23615.t1 MTR_4g093030 68.852 61 19 0 1 61 1 61 9.56e-24 87.4
MS.gene23615.t1 MTR_5g066180 66.667 60 20 0 1 60 1 60 1.02e-23 89.0
MS.gene23615.t1 MTR_5g032150 67.797 59 19 0 1 59 1 59 1.64e-23 88.6
MS.gene23615.t1 MTR_5g032520 67.797 59 19 0 1 59 1 59 1.88e-23 88.6
MS.gene23615.t1 MTR_8g066260 72.881 59 16 0 1 59 1 59 2.01e-23 88.6
MS.gene23615.t1 MTR_7g016630 65.079 63 22 0 1 63 1 63 2.50e-23 88.6
MS.gene23615.t1 MTR_2g009890 71.667 60 17 0 1 60 1 60 5.17e-23 88.2
MS.gene23615.t1 MTR_4g036050 63.636 66 23 1 1 66 1 65 1.07e-22 85.9
MS.gene23615.t1 MTR_3g088615 61.017 59 23 0 1 59 1 59 1.77e-22 84.7
MS.gene23615.t1 MTR_6g464720 68.333 60 19 0 1 60 1 60 2.51e-22 85.9
MS.gene23615.t1 MTR_5g031000 63.333 60 22 0 1 60 1 60 2.80e-22 85.5
MS.gene23615.t1 MTR_5g031000 63.333 60 22 0 1 60 1 60 3.05e-22 85.5
MS.gene23615.t1 MTR_3g102570 65.079 63 22 0 1 63 1 63 4.82e-22 86.3
MS.gene23615.t1 MTR_4g084740 62.295 61 23 0 1 61 1 61 7.72e-22 85.9
MS.gene23615.t1 MTR_4g093970 65.000 60 21 0 1 60 27 86 8.27e-22 84.3
MS.gene23615.t1 MTR_3g113030 67.797 59 19 0 1 59 1 59 1.15e-21 84.0
MS.gene23615.t1 MTR_1g029670 55.932 59 26 0 1 59 1 59 2.74e-21 81.6
MS.gene23615.t1 MTR_5g046790 66.102 59 20 0 1 59 1 59 1.08e-20 80.9
MS.gene23615.t1 MTR_1g041615 69.811 53 16 0 13 65 17 69 3.25e-20 77.8
MS.gene23615.t1 MTR_5g021270 61.017 59 23 0 1 59 1 59 1.49e-19 78.2
MS.gene23615.t1 MTR_5g021270 61.017 59 23 0 1 59 1 59 1.68e-19 78.2
MS.gene23615.t1 MTR_1g038300 61.017 59 23 0 1 59 1 59 3.01e-19 77.4
MS.gene23615.t1 MTR_2g030740 58.929 56 23 0 3 58 10 65 3.82e-17 72.0
MS.gene23615.t1 MTR_8g079502 56.897 58 25 0 1 58 1 58 4.54e-17 70.9
MS.gene23615.t1 MTR_1g108580 57.143 56 24 0 3 58 10 65 5.01e-17 71.6
MS.gene23615.t1 MTR_1g108510 55.357 56 25 0 3 58 10 65 8.40e-17 71.2
MS.gene23615.t1 MTR_3g030770 55.357 56 25 0 3 58 10 65 8.95e-17 70.9
MS.gene23615.t1 MTR_1g047550 57.895 57 24 0 1 57 1 57 1.06e-16 70.1
MS.gene23615.t1 MTR_1g054265 55.172 58 26 0 1 58 1 58 1.26e-16 69.3
MS.gene23615.t1 MTR_8g086290 56.364 55 24 0 3 57 13 67 3.02e-16 68.6
MS.gene23615.t1 MTR_1g063160 54.386 57 26 0 1 57 1 57 3.72e-16 68.6
MS.gene23615.t1 MTR_5g053390 57.143 56 24 0 3 58 10 65 8.24e-16 68.6
MS.gene23615.t1 MTR_3g052920 57.143 56 24 0 3 58 10 65 1.37e-15 68.2
MS.gene23615.t1 MTR_1g077360 55.357 56 25 0 3 58 10 65 1.61e-15 67.8
MS.gene23615.t1 MTR_7g028448 68.182 44 14 0 14 57 24 67 1.62e-15 66.6
MS.gene23615.t1 MTR_4g036915 68.182 44 14 0 14 57 24 67 1.62e-15 66.6
MS.gene23615.t1 MTR_1g075600 55.357 56 25 0 3 58 10 65 1.63e-15 67.8
MS.gene23615.t1 MTR_1g105920 55.357 56 25 0 3 58 10 65 2.39e-15 67.4
MS.gene23615.t1 MTR_4g131030 53.448 58 27 0 1 58 1 58 2.40e-15 67.0
MS.gene23615.t1 MTR_5g041650 52.830 53 25 0 1 53 38 90 2.48e-15 68.6
MS.gene23615.t1 MTR_2g105290 54.386 57 26 0 1 57 11 67 2.57e-15 66.2
MS.gene23615.t1 MTR_2g093190 53.571 56 26 0 3 58 10 65 2.63e-15 67.0
MS.gene23615.t1 MTR_3g052870 55.357 56 25 0 3 58 10 65 2.67e-15 67.0
MS.gene23615.t1 MTR_5g045560 55.357 56 25 0 3 58 10 65 3.71e-15 67.0
MS.gene23615.t1 MTR_0121s0100 51.786 56 27 0 3 58 10 65 3.73e-15 64.7
MS.gene23615.t1 MTR_8g051580 54.386 57 26 0 1 57 1 57 4.45e-15 65.9
MS.gene23615.t1 MTR_8g043650 55.357 56 25 0 3 58 10 65 5.18e-15 66.6
MS.gene23615.t1 MTR_2g085250 53.571 56 26 0 3 58 10 65 5.69e-15 66.2
MS.gene23615.t1 MTR_2g085280 53.571 56 26 0 3 58 10 65 6.05e-15 66.2
MS.gene23615.t1 MTR_1g012570 55.357 56 25 0 3 58 10 65 7.61e-15 66.2
MS.gene23615.t1 MTR_1g105910 55.357 56 25 0 3 58 10 65 8.45e-15 65.9
MS.gene23615.t1 MTR_4g094638 49.153 59 30 0 1 59 1 59 1.01e-14 64.7
MS.gene23615.t1 MTR_5g055100 53.571 56 26 0 3 58 10 65 1.77e-14 65.1
MS.gene23615.t1 MTR_1g106070 51.786 56 27 0 3 58 10 65 2.42e-14 63.9
MS.gene23615.t1 MTR_4g094632 47.458 59 31 0 1 59 1 59 2.48e-14 63.2
MS.gene23615.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 3.45e-14 65.1
MS.gene23615.t1 MTR_0121s0080 50.000 54 27 0 5 58 12 65 4.32e-13 61.2
MS.gene23615.t1 MTR_3g030780 48.214 56 29 0 3 58 10 65 1.04e-12 58.5
MS.gene23615.t1 MTR_8g046350 47.368 57 30 0 1 57 1 57 1.33e-12 58.9
MS.gene23615.t1 MTR_3g067875 53.191 47 22 0 11 57 1 47 3.45e-12 55.8
MS.gene23615.t1 MTR_6g018920 48.000 50 26 0 1 50 1 50 3.80e-12 59.3
MS.gene23615.t1 MTR_4g127140 60.465 43 17 0 15 57 25 67 4.73e-12 57.8
MS.gene23615.t1 MTR_3g080940 48.214 56 29 0 3 58 10 65 5.51e-12 58.2
MS.gene23615.t1 MTR_6g005440 48.000 50 26 0 1 50 1 50 9.42e-12 58.2
MS.gene23615.t1 MTR_1g105905 54.167 48 22 0 11 58 1 48 9.61e-12 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23615.t1 AT2G45660 93.333 60 4 0 1 60 1 60 5.23e-37 121
MS.gene23615.t1 AT4G11880 88.889 63 7 0 1 63 1 63 1.53e-36 120
MS.gene23615.t1 AT4G11880 88.889 63 7 0 1 63 1 63 1.53e-36 120
MS.gene23615.t1 AT2G45660 93.333 60 4 0 1 60 1 60 2.94e-36 120
MS.gene23615.t1 AT4G11880 88.889 63 7 0 1 63 1 63 5.25e-36 120
MS.gene23615.t1 AT4G11880 88.889 63 7 0 1 63 1 63 5.25e-36 120
MS.gene23615.t1 AT4G22950 90.000 60 6 0 1 60 1 60 1.46e-35 117
MS.gene23615.t1 AT4G22950 90.000 60 6 0 1 60 1 60 1.10e-34 117
MS.gene23615.t1 AT4G22950 90.000 60 6 0 1 60 1 60 1.10e-34 117
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 5.39e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 5.39e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 5.39e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 5.39e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 5.39e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 6.64e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 6.64e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 6.64e-33 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 7.64e-33 108
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.73e-32 110
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 3.73e-32 110
MS.gene23615.t1 AT4G09960 80.000 60 12 0 1 60 1 60 8.23e-30 104
MS.gene23615.t1 AT4G09960 80.000 60 12 0 1 60 2 61 9.98e-30 104
MS.gene23615.t1 AT4G09960 80.000 60 12 0 1 60 1 60 1.01e-29 104
MS.gene23615.t1 AT4G09960 80.000 60 12 0 1 60 11 70 1.43e-29 104
MS.gene23615.t1 AT4G09960 80.000 60 12 0 1 60 27 86 2.89e-29 104
MS.gene23615.t1 AT3G58780 77.966 59 13 0 3 61 18 76 9.59e-29 102
MS.gene23615.t1 AT1G24260 72.308 65 18 0 1 65 1 65 1.47e-28 102
MS.gene23615.t1 AT2G42830 75.000 64 14 1 3 64 18 81 1.86e-28 102
MS.gene23615.t1 AT2G42830 75.000 64 14 1 3 64 18 81 1.88e-28 101
MS.gene23615.t1 AT1G24260 72.308 65 18 0 1 65 1 65 2.11e-28 101
MS.gene23615.t1 AT1G24260 72.308 65 18 0 1 65 1 65 2.25e-28 101
MS.gene23615.t1 AT3G58780 75.000 64 14 1 3 64 18 81 2.35e-28 101
MS.gene23615.t1 AT3G58780 75.000 64 14 1 3 64 24 87 3.09e-28 101
MS.gene23615.t1 AT2G03710 75.000 60 15 0 1 60 1 60 3.86e-28 99.4
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 4.15e-28 100
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 4.15e-28 100
MS.gene23615.t1 AT5G62165 83.333 60 10 0 1 60 1 60 4.15e-28 100
MS.gene23615.t1 AT3G58780 76.562 64 13 1 3 64 18 81 4.92e-28 101
MS.gene23615.t1 AT4G18960 79.310 58 12 0 3 60 19 76 6.08e-28 100
MS.gene23615.t1 AT2G45650 79.661 59 12 0 1 59 1 59 6.28e-28 100
MS.gene23615.t1 AT3G02310 69.231 65 20 0 1 65 1 65 9.08e-28 99.0
MS.gene23615.t1 AT5G51860 76.667 60 14 0 1 60 1 60 9.52e-28 99.0
MS.gene23615.t1 AT5G51860 76.667 60 14 0 1 60 1 60 1.17e-27 99.0
MS.gene23615.t1 AT2G03710 75.000 60 15 0 1 60 1 60 2.09e-27 99.4
MS.gene23615.t1 AT2G03710 75.000 60 15 0 1 60 1 60 2.25e-27 99.4
MS.gene23615.t1 AT5G51870 73.770 61 16 0 1 61 1 61 4.52e-27 96.3
MS.gene23615.t1 AT5G15800 70.769 65 19 0 1 65 1 65 7.45e-27 97.8
MS.gene23615.t1 AT3G02310 69.231 65 20 0 1 65 1 65 8.39e-27 97.8
MS.gene23615.t1 AT5G15800 70.769 65 19 0 1 65 1 65 9.20e-27 97.8
MS.gene23615.t1 AT5G51870 73.770 61 16 0 1 61 24 84 1.12e-26 95.9
MS.gene23615.t1 AT5G51870 73.770 61 16 0 1 61 1 61 1.24e-26 96.3
MS.gene23615.t1 AT3G57230 73.333 60 16 0 1 60 1 60 2.17e-26 94.0
MS.gene23615.t1 AT5G51870 73.770 61 16 0 1 61 1 61 3.08e-26 95.5
MS.gene23615.t1 AT5G51870 73.770 61 16 0 1 61 11 71 3.94e-26 95.5
MS.gene23615.t1 AT3G58780 77.586 58 13 0 3 60 18 75 1.94e-25 94.7
MS.gene23615.t1 AT5G13790 75.000 60 15 0 1 60 1 60 3.55e-25 94.0
MS.gene23615.t1 AT5G13790 75.000 60 15 0 1 60 1 60 3.94e-25 93.6
MS.gene23615.t1 AT4G09960 80.000 60 12 0 1 60 96 155 5.66e-25 94.4
MS.gene23615.t1 AT5G60910 66.154 65 22 0 1 65 1 65 6.89e-25 92.4
MS.gene23615.t1 AT3G61120 71.186 59 17 0 1 59 1 59 9.05e-25 92.4
MS.gene23615.t1 AT3G57390 69.492 59 18 0 1 59 1 59 1.25e-24 91.7
MS.gene23615.t1 AT3G57390 69.492 59 18 0 1 59 1 59 2.09e-24 91.7
MS.gene23615.t1 AT3G30260 64.615 65 23 0 1 65 1 65 2.62e-24 91.3
MS.gene23615.t1 AT2G14210 65.079 63 22 0 1 63 1 63 6.97e-24 89.7
MS.gene23615.t1 AT3G57230 73.333 60 16 0 1 60 1 60 7.25e-24 89.7
MS.gene23615.t1 AT3G57230 73.333 60 16 0 1 60 1 60 7.25e-24 89.7
MS.gene23615.t1 AT2G22540 70.000 60 18 0 1 60 1 60 8.59e-24 89.7
MS.gene23615.t1 AT2G22540 70.000 60 18 0 1 60 1 60 8.59e-24 89.7
MS.gene23615.t1 AT1G71692 63.636 66 23 1 1 66 1 65 9.41e-24 89.0
MS.gene23615.t1 AT4G37940 68.333 60 19 0 1 60 1 60 9.93e-24 87.8
MS.gene23615.t1 AT5G10140 63.077 65 24 0 1 65 1 65 2.32e-23 86.7
MS.gene23615.t1 AT5G10140 63.077 65 24 0 1 65 1 65 3.26e-23 86.7
MS.gene23615.t1 AT4G24540 67.213 61 20 0 1 61 1 61 3.45e-23 87.8
MS.gene23615.t1 AT5G10140 63.077 65 24 0 1 65 1 65 4.35e-23 86.7
MS.gene23615.t1 AT5G10140 63.077 65 24 0 1 65 1 65 4.53e-23 86.7
MS.gene23615.t1 AT1G69120 69.492 59 18 0 1 59 1 59 3.13e-22 85.9
MS.gene23615.t1 AT1G69120 69.492 59 18 0 1 59 1 59 4.10e-22 85.1
MS.gene23615.t1 AT2G22630 65.000 60 21 0 1 60 1 60 5.19e-22 84.7
MS.gene23615.t1 AT2G22630 65.000 60 21 0 1 60 1 60 5.19e-22 84.7
MS.gene23615.t1 AT1G26310 69.492 59 18 0 1 59 1 59 8.69e-22 84.7
MS.gene23615.t1 AT2G14210 65.079 63 22 0 1 63 1 63 1.29e-21 84.0
MS.gene23615.t1 AT3G54340 66.102 59 20 0 1 59 1 59 1.36e-21 83.6
MS.gene23615.t1 AT5G23260 63.934 61 22 0 1 61 1 61 1.77e-21 83.6
MS.gene23615.t1 AT2G22540 66.667 57 19 0 1 57 1 57 1.93e-21 83.6
MS.gene23615.t1 AT5G20240 62.069 58 22 0 1 58 1 58 2.32e-21 81.3
MS.gene23615.t1 AT4G37940 68.333 60 19 0 1 60 1 60 2.87e-21 82.4
MS.gene23615.t1 AT1G22130 67.241 58 19 0 1 58 1 58 3.02e-21 84.3
MS.gene23615.t1 AT5G23260 63.934 61 22 0 1 61 1 61 3.80e-21 82.8
MS.gene23615.t1 AT4G37940 68.333 60 19 0 1 60 1 60 4.26e-21 82.4
MS.gene23615.t1 AT1G77980 65.517 58 20 0 1 58 1 58 4.86e-21 84.0
MS.gene23615.t1 AT5G65070 62.712 59 22 0 1 59 1 59 8.27e-21 79.7
MS.gene23615.t1 AT5G23260 63.934 61 22 0 1 61 17 77 1.02e-20 82.0
MS.gene23615.t1 AT5G23260 63.934 61 22 0 1 61 17 77 1.05e-20 82.0
MS.gene23615.t1 AT5G65070 62.712 59 22 0 1 59 1 59 2.82e-20 79.7
MS.gene23615.t1 AT5G65070 62.712 59 22 0 1 59 1 59 5.24e-20 79.3
MS.gene23615.t1 AT5G65070 60.938 64 24 1 1 63 1 64 5.61e-20 79.7
MS.gene23615.t1 AT5G65070 62.712 59 22 0 1 59 1 59 6.20e-20 79.3
MS.gene23615.t1 AT5G65050 59.322 59 24 0 1 59 1 59 3.32e-19 76.3
MS.gene23615.t1 AT5G20240 63.158 57 21 0 1 57 1 57 4.90e-19 76.6
MS.gene23615.t1 AT5G65050 59.322 59 24 0 1 59 1 59 6.44e-19 75.9
MS.gene23615.t1 AT5G65050 59.322 59 24 0 1 59 1 59 7.06e-19 75.9
MS.gene23615.t1 AT5G65050 59.322 59 24 0 1 59 1 59 8.12e-19 75.9
MS.gene23615.t1 AT5G65060 55.932 59 26 0 1 59 1 59 1.93e-17 72.0
MS.gene23615.t1 AT5G65060 55.932 59 26 0 1 59 1 59 2.18e-17 72.0
MS.gene23615.t1 AT5G65060 55.932 59 26 0 1 59 1 59 2.61e-17 72.0
MS.gene23615.t1 AT1G77950 58.621 58 24 0 1 58 1 58 5.24e-17 72.0
MS.gene23615.t1 AT1G77950 58.621 58 24 0 1 58 1 58 5.24e-17 72.0
MS.gene23615.t1 AT1G77950 58.621 58 24 0 1 58 1 58 5.24e-17 72.0
MS.gene23615.t1 AT1G77950 58.621 58 24 0 1 58 1 58 5.24e-17 72.0
MS.gene23615.t1 AT1G18750 50.000 64 32 0 1 64 1 64 6.55e-17 72.8
MS.gene23615.t1 AT1G18750 50.000 64 32 0 1 64 1 64 6.73e-17 72.8
MS.gene23615.t1 AT1G18750 50.000 64 32 0 1 64 1 64 7.09e-17 72.8
MS.gene23615.t1 AT4G37435 57.895 57 24 0 1 57 1 57 8.36e-17 70.5
MS.gene23615.t1 AT5G65080 55.932 59 26 0 1 59 8 66 2.22e-16 69.3
MS.gene23615.t1 AT1G31140 55.000 60 27 0 1 60 1 60 2.60e-16 69.7
MS.gene23615.t1 AT5G65080 55.932 59 26 0 1 59 8 66 2.98e-16 69.3
MS.gene23615.t1 AT1G31140 55.000 60 27 0 1 60 1 60 3.05e-16 69.3
MS.gene23615.t1 AT3G66656 51.724 58 28 0 1 58 1 58 7.04e-16 67.8
MS.gene23615.t1 AT2G03060 54.717 53 24 0 1 53 1 53 1.98e-15 68.9
MS.gene23615.t1 AT2G03060 54.717 53 24 0 1 53 1 53 1.98e-15 68.9
MS.gene23615.t1 AT2G03060 54.717 53 24 0 1 53 1 53 1.98e-15 68.9
MS.gene23615.t1 AT1G01530 55.357 56 25 0 3 58 8 63 2.02e-15 67.8
MS.gene23615.t1 AT2G34440 50.000 58 29 0 1 58 1 58 2.45e-15 66.2
MS.gene23615.t1 AT2G03060 54.717 53 24 0 1 53 1 53 3.27e-15 68.2
MS.gene23615.t1 AT4G36590 57.143 56 24 0 3 58 8 63 4.83e-15 66.6
MS.gene23615.t1 AT5G60440 53.571 56 26 0 3 58 8 63 5.55e-15 67.0
MS.gene23615.t1 AT1G72350 54.839 62 28 0 3 64 44 105 7.95e-15 65.9
MS.gene23615.t1 AT1G77080 59.322 59 24 0 1 59 1 59 1.69e-14 64.3
MS.gene23615.t1 AT1G77080 59.322 59 24 0 1 59 1 59 1.88e-14 63.9
MS.gene23615.t1 AT1G77080 59.322 59 24 0 1 59 1 59 2.56e-14 63.2
MS.gene23615.t1 AT1G69540 50.943 53 26 0 1 53 1 53 2.78e-14 65.5
MS.gene23615.t1 AT1G77080 59.322 59 24 0 1 59 1 59 3.69e-14 63.5
MS.gene23615.t1 AT1G69540 50.943 53 26 0 1 53 1 53 4.11e-14 65.1
MS.gene23615.t1 AT1G77080 59.322 59 24 0 1 59 1 59 5.96e-14 63.2
MS.gene23615.t1 AT1G77080 59.322 59 24 0 1 59 1 59 8.35e-14 63.2
MS.gene23615.t1 AT1G65360 48.214 56 29 0 3 58 8 63 2.03e-13 62.0
MS.gene23615.t1 AT2G24840 53.571 56 26 0 3 58 64 119 4.93e-13 61.6
MS.gene23615.t1 AT3G04100 46.429 56 30 0 3 58 15 70 1.61e-12 59.7
MS.gene23615.t1 AT1G47760 46.552 58 31 0 1 58 1 58 4.16e-12 58.2
MS.gene23615.t1 AT2G26320 52.000 50 24 0 1 50 17 66 2.21e-11 54.7
MS.gene23615.t1 AT1G17310 58.000 50 21 0 15 64 61 110 3.35e-11 56.2
MS.gene23615.t1 AT1G28460 49.123 57 29 0 3 59 9 65 3.74e-11 55.5
MS.gene23615.t1 AT1G17310 58.000 50 21 0 15 64 72 121 4.23e-11 55.8
MS.gene23615.t1 AT1G29962 47.368 57 30 0 3 59 9 65 9.19e-11 54.7

Find 8 sgRNAs with CRISPR-Local

Find 17 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCTCAAAGAGGAGAAA+TGG 0.421788 8.1:-67934870 MS.gene23615:CDS
TTTATGAATTTGCTAGCTCT+AGG 0.521973 8.1:-67934767 MS.gene23615:intron
TATTTAAGAGGGCTAATAAG+AGG 0.535086 8.1:-67934566 MS.gene23615:intron
AATTCATAAAGCCTCCCTCT+TGG 0.547865 8.1:+67934780 None:intergenic
ATCAGTGTTGTGTGATGCTG+AGG 0.567431 8.1:-67934823 MS.gene23615:CDS
GGCAAGTAACATTCTCAAAG+AGG 0.594159 8.1:-67934878 MS.gene23615:CDS
ACACAACACTGATAACTCAA+AGG 0.620897 8.1:+67934833 None:intergenic
GTATAGAGAACGCAACAAGT+AGG 0.642404 8.1:-67934899 MS.gene23615:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATTTTATACATCA+AGG - chr8.1:67934801-67934820 MS.gene23615:CDS 10.0%
!!! ATAATAATTTTATACATCAA+GGG - chr8.1:67934802-67934821 MS.gene23615:CDS 10.0%
!! ATTAATTAAGTCGAAAAAAA+AGG + chr8.1:67934750-67934769 None:intergenic 15.0%
!! GTTAGATTAAATATTTAAGA+GGG - chr8.1:67934909-67934928 MS.gene23615:CDS 15.0%
!! TGTTAGATTAAATATTTAAG+AGG - chr8.1:67934908-67934927 MS.gene23615:CDS 15.0%
TATTTAAGAGGGCTAATAAG+AGG - chr8.1:67934920-67934939 MS.gene23615:CDS 30.0%
! TTATTGTTTTCTCACCAAGA+GGG - chr8.1:67934692-67934711 MS.gene23615:intron 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG - chr8.1:67934719-67934738 MS.gene23615:intron 30.0%
ACACAACACTGATAACTCAA+AGG + chr8.1:67934656-67934675 None:intergenic 35.0%
ACATTCTCAAAGAGGAGAAA+TGG - chr8.1:67934616-67934635 MS.gene23615:intron 35.0%
AGATGCAATCACACAATTTG+AGG + chr8.1:67934781-67934800 None:intergenic 35.0%
! CTTATTGTTTTCTCACCAAG+AGG - chr8.1:67934691-67934710 MS.gene23615:intron 35.0%
AATTCATAAAGCCTCCCTCT+TGG + chr8.1:67934709-67934728 None:intergenic 40.0%
GGCAAGTAACATTCTCAAAG+AGG - chr8.1:67934608-67934627 MS.gene23615:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG - chr8.1:67934587-67934606 MS.gene23615:intron 40.0%
ATCAGTGTTGTGTGATGCTG+AGG - chr8.1:67934663-67934682 MS.gene23615:intron 45.0%
! TTGTTTTCTCACCAAGAGGG+AGG - chr8.1:67934695-67934714 MS.gene23615:intron 45.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 67934559 67934949 67934559 ID=MS.gene23615
chr8.1 mRNA 67934559 67934949 67934559 ID=MS.gene23615.t1;Parent=MS.gene23615
chr8.1 exon 67934768 67934949 67934768 ID=MS.gene23615.t1.exon1;Parent=MS.gene23615.t1
chr8.1 CDS 67934768 67934949 67934768 ID=cds.MS.gene23615.t1;Parent=MS.gene23615.t1
chr8.1 exon 67934559 67934580 67934559 ID=MS.gene23615.t1.exon2;Parent=MS.gene23615.t1
chr8.1 CDS 67934559 67934580 67934559 ID=cds.MS.gene23615.t1;Parent=MS.gene23615.t1
Gene Sequence

>MS.gene23615

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGGAGAAATGGTTTGTTGAAGAAAGCCTTTGAGTTATCAGTGTTGTGTGATGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGAGGCTTTATGAATTTGCTAGCTCTAGGTAAGTCCTTTTTTTTCGACTTAATTAATTTTTTTATCCTCAAATTGTGTGATTGCATCTAATAATAATTTTATACATCAAGGGTTTCTTTAATTTTGATTGAGCTAGTAATTTTTTGCAATCATTTTTGTTTTTGTGTGTATATATATCTATTTTTAAAACTAAATTGTTAGATTAAATATTTAAGAGGGCTAATAAGAGGAGCCTGA
Protein sequence

>MS.gene23615.t1

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASSRGLIRGA