Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23829.t1 | AET03563.1 | 82.2 | 242 | 40 | 2 | 1 | 239 | 1 | 242 | 2.80E-106 | 394.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23829.t1 | Q8S9H7 | 41.7 | 60 | 35 | 0 | 85 | 144 | 119 | 178 | 5.2e-08 | 59.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23829.t1 | G7L8M9 | 82.2 | 242 | 40 | 2 | 1 | 239 | 1 | 242 | 2.0e-106 | 394.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene23829.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23829.t1 | MTR_8g072990 | 89.256 | 242 | 23 | 2 | 1 | 239 | 1 | 242 | 4.14e-145 | 405 |
| MS.gene23829.t1 | MTR_6g043490 | 65.726 | 248 | 56 | 5 | 1 | 238 | 1 | 229 | 1.97e-96 | 281 |
| MS.gene23829.t1 | MTR_6g043480 | 64.516 | 248 | 59 | 6 | 1 | 238 | 1 | 229 | 8.87e-92 | 270 |
| MS.gene23829.t1 | MTR_8g073050 | 52.245 | 245 | 88 | 8 | 1 | 238 | 1 | 223 | 1.36e-54 | 175 |
| MS.gene23829.t1 | MTR_5g027570 | 41.791 | 67 | 39 | 0 | 93 | 159 | 87 | 153 | 8.21e-14 | 68.9 |
| MS.gene23829.t1 | MTR_8g063870 | 31.343 | 134 | 85 | 3 | 92 | 223 | 89 | 217 | 3.03e-12 | 65.1 |
| MS.gene23829.t1 | MTR_5g027550 | 42.593 | 54 | 31 | 0 | 93 | 146 | 72 | 125 | 3.02e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23829.t1 | AT5G08520 | 43.396 | 53 | 30 | 0 | 95 | 147 | 115 | 167 | 2.12e-11 | 62.8 |
Find 75 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTTGTTCCAACATATTA+TGG | 0.256138 | 8.4:+31307459 | MS.gene23829:CDS |
| CCATAATATGTTGGAACAAC+TGG | 0.277085 | 8.4:-31307459 | None:intergenic |
| AGTTGATTTGGAGCTTCGTT+TGG | 0.335545 | 8.4:+31307569 | MS.gene23829:CDS |
| TATTTGTGATGGGGATGATT+AGG | 0.340678 | 8.4:+31307202 | MS.gene23829:CDS |
| AGAGTGAGAGTTTCCTTTGC+AGG | 0.342620 | 8.4:-31307432 | None:intergenic |
| GTTGATTTGGAGCTTCGTTT+GGG | 0.348489 | 8.4:+31307570 | MS.gene23829:CDS |
| TGGTGTTGGTGGTGAAGATT+AGG | 0.365491 | 8.4:-31306326 | None:intergenic |
| GATGAAGATATGGGTATTGA+TGG | 0.385170 | 8.4:-31306266 | None:intergenic |
| TGGTGCAACAGATGAAGATA+TGG | 0.391943 | 8.4:-31306276 | None:intergenic |
| TGTATTAGTTTATTTGTGAT+GGG | 0.392456 | 8.4:+31307192 | MS.gene23829:intron |
| GCTATGCTGCTAGTTTCTTC+AGG | 0.401725 | 8.4:+31307295 | MS.gene23829:CDS |
| TTGTATTAGTTTATTTGTGA+TGG | 0.403857 | 8.4:+31307191 | MS.gene23829:intron |
| GAGCTGATGGTAAGGTAGTT+TGG | 0.407255 | 8.4:-31306346 | None:intergenic |
| ACTACCAACTGTCCTCAATC+TGG | 0.424823 | 8.4:+31306401 | MS.gene23829:CDS |
| GTCGGAGAACCCTAGCAATT+AGG | 0.429758 | 8.4:-31306439 | None:intergenic |
| GAATCAAAATTATGTATCAT+TGG | 0.435669 | 8.4:-31306296 | None:intergenic |
| AAACCATGCACATATTCATC+TGG | 0.459888 | 8.4:-31307324 | None:intergenic |
| AGTTGGTAGTGATCATTTGA+TGG | 0.459982 | 8.4:-31306388 | None:intergenic |
| GTAAGGTAGTTTGGTGTTGG+TGG | 0.469673 | 8.4:-31306337 | None:intergenic |
| AAAGAAAATATGATTCCAAC+GGG | 0.472141 | 8.4:+31307352 | MS.gene23829:CDS |
| ATGGTAAGGTAGTTTGGTGT+TGG | 0.479447 | 8.4:-31306340 | None:intergenic |
| TGCCATTCCCAAGTGGATCT+AGG | 0.486137 | 8.4:+31306483 | MS.gene23829:CDS |
| TGGTGATGGAGAAGTTGATT+TGG | 0.487057 | 8.4:+31307557 | MS.gene23829:CDS |
| TTAGGTATGGACAAGGGAGA+TGG | 0.490096 | 8.4:+31307220 | MS.gene23829:CDS |
| ATGGTGGTAGCCTAATTGCT+AGG | 0.506606 | 8.4:+31306429 | MS.gene23829:CDS |
| GAAGATATGGGTATTGATGG+AGG | 0.506856 | 8.4:-31306263 | None:intergenic |
| GATCTAGGCACATGGTGTCT+TGG | 0.508481 | 8.4:+31306498 | MS.gene23829:CDS |
| AATGGCATGGTGTTTGATCC+TGG | 0.510899 | 8.4:-31306467 | None:intergenic |
| CCTAGTGGTTCAGCTGGTGA+TGG | 0.511802 | 8.4:+31307543 | MS.gene23829:CDS |
| AGATATGGGTATTGATGGAG+GGG | 0.512610 | 8.4:-31306261 | None:intergenic |
| GCATAGCTTTGAACTTGTTG+TGG | 0.515534 | 8.4:-31307279 | None:intergenic |
| AGGGTTCTCCGACCGTTACC+AGG | 0.518804 | 8.4:+31306449 | MS.gene23829:CDS |
| TAGTGATCATTTGATGGGAC+TGG | 0.528979 | 8.4:-31306382 | None:intergenic |
| TGGTCGTGTCCTTGAGCTGA+TGG | 0.529573 | 8.4:-31306359 | None:intergenic |
| AAGATATGGGTATTGATGGA+GGG | 0.533718 | 8.4:-31306262 | None:intergenic |
| TGTCCTCAATCTGGAACTCA+TGG | 0.540531 | 8.4:+31306410 | MS.gene23829:CDS |
| ACTCCGCCTAGTGGTTCAGC+TGG | 0.543679 | 8.4:+31307537 | MS.gene23829:CDS |
| AAGGAAGTATGTAAGATCAA+TGG | 0.547109 | 8.4:-31306234 | None:intergenic |
| TGCCTAGATCCACTTGGGAA+TGG | 0.547210 | 8.4:-31306485 | None:intergenic |
| TGGTGGTAGCCTAATTGCTA+GGG | 0.547474 | 8.4:+31306430 | MS.gene23829:CDS |
| GTATTGATGGAGGGGAGTCA+AGG | 0.547727 | 8.4:-31306253 | None:intergenic |
| CATAATATGTTGGAACAACT+GGG | 0.548941 | 8.4:-31307458 | None:intergenic |
| GTGTCCTTGAGCTGATGGTA+AGG | 0.551347 | 8.4:-31306354 | None:intergenic |
| GCTTCTCCTCCATAATATGT+TGG | 0.555055 | 8.4:-31307468 | None:intergenic |
| AAAAGAAAATATGATTCCAA+CGG | 0.555446 | 8.4:+31307351 | MS.gene23829:CDS |
| AGTTCCAGATTGAGGACAGT+TGG | 0.555757 | 8.4:-31306405 | None:intergenic |
| GTTGGTAGTGATCATTTGAT+GGG | 0.561211 | 8.4:-31306387 | None:intergenic |
| GTATTAGTTTATTTGTGATG+GGG | 0.567565 | 8.4:+31307193 | MS.gene23829:intron |
| CCATCACCAGCTGAACCACT+AGG | 0.572498 | 8.4:-31307543 | None:intergenic |
| GGTGCAACAGATGAAGATAT+GGG | 0.573397 | 8.4:-31306275 | None:intergenic |
| CCACCATGAGTTCCAGATTG+AGG | 0.577061 | 8.4:-31306413 | None:intergenic |
| TGATGATGAGTTTATCCCGT+TGG | 0.580417 | 8.4:-31307367 | None:intergenic |
| GTGATGGGGATGATTAGGTA+TGG | 0.581299 | 8.4:+31307207 | MS.gene23829:CDS |
| TGCTAACAATGATCCTGCAA+AGG | 0.585046 | 8.4:+31307419 | MS.gene23829:CDS |
| GTAAGATCAATGGTCTCCAT+AGG | 0.586191 | 8.4:-31306224 | None:intergenic |
| TTGGTGGTGAAGATTAGGAT+TGG | 0.600454 | 8.4:-31306321 | None:intergenic |
| TGAACCACTAGGCGGAGTCA+TGG | 0.600756 | 8.4:-31307532 | None:intergenic |
| CCCAAGTGGATCTAGGCACA+TGG | 0.602457 | 8.4:+31306490 | MS.gene23829:CDS |
| GTTGTTCCAACATATTATGG+AGG | 0.614847 | 8.4:+31307462 | MS.gene23829:CDS |
| ACCATGTGCCTAGATCCACT+TGG | 0.620902 | 8.4:-31306491 | None:intergenic |
| CATGCACATATTCATCTGGT+AGG | 0.621703 | 8.4:-31307320 | None:intergenic |
| TTGATTTGGAGCTTCGTTTG+GGG | 0.630279 | 8.4:+31307571 | MS.gene23829:CDS |
| AGATCCACTTGGGAATGGCA+TGG | 0.630755 | 8.4:-31306480 | None:intergenic |
| CCATGTGCCTAGATCCACTT+GGG | 0.631806 | 8.4:-31306490 | None:intergenic |
| CTACCAGATGAATATGTGCA+TGG | 0.642317 | 8.4:+31307321 | MS.gene23829:CDS |
| ATGGTGTTTGATCCTGGTAA+CGG | 0.649197 | 8.4:-31306461 | None:intergenic |
| ACTACCTTACCATCAGCTCA+AGG | 0.650911 | 8.4:+31306350 | MS.gene23829:CDS |
| TGTTTGATCCTGGTAACGGT+CGG | 0.653269 | 8.4:-31306457 | None:intergenic |
| TGATCATTTGATGGGACTGG+TGG | 0.653895 | 8.4:-31306379 | None:intergenic |
| AACACCATGCCATTCCCAAG+TGG | 0.655209 | 8.4:+31306476 | MS.gene23829:CDS |
| GGGATGATTAGGTATGGACA+AGG | 0.664435 | 8.4:+31307213 | MS.gene23829:CDS |
| CCTCAATCTGGAACTCATGG+TGG | 0.673597 | 8.4:+31306413 | MS.gene23829:CDS |
| ACTTCCATGACTCCGCCTAG+TGG | 0.676435 | 8.4:+31307528 | MS.gene23829:CDS |
| GGATGATTAGGTATGGACAA+GGG | 0.676501 | 8.4:+31307214 | MS.gene23829:CDS |
| TCACCAGCTGAACCACTAGG+CGG | 0.766297 | 8.4:-31307540 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAATTTTTACCAAAAA+AGG | + | chr8.4:31307031-31307050 | MS.gene23829:intron | 10.0% |
| !! | TAAAATAATGACAAATATCA+GGG | - | chr8.4:31306694-31306713 | None:intergenic | 15.0% |
| !! | TTAAAATAATGACAAATATC+AGG | - | chr8.4:31306695-31306714 | None:intergenic | 15.0% |
| !! | TTATATTGACAAATTTATAG+AGG | - | chr8.4:31306880-31306899 | None:intergenic | 15.0% |
| !!! | CATTATTTAATAACCTTTTT+TGG | - | chr8.4:31307047-31307066 | None:intergenic | 15.0% |
| !! | AAAAGAAAATATGATTCCAA+CGG | + | chr8.4:31307351-31307370 | MS.gene23829:CDS | 20.0% |
| !! | GAATCAAAATTATGTATCAT+TGG | - | chr8.4:31306299-31306318 | None:intergenic | 20.0% |
| !! | TACAAAAGTAAAATAAGAAC+AGG | - | chr8.4:31307176-31307195 | None:intergenic | 20.0% |
| !! | TATTATTCAATAACCTATGA+AGG | - | chr8.4:31307016-31307035 | None:intergenic | 20.0% |
| !!! | TGTATTAGTTTATTTGTGAT+GGG | + | chr8.4:31307192-31307211 | MS.gene23829:intron | 20.0% |
| !!! | TTGTATTAGTTTATTTGTGA+TGG | + | chr8.4:31307191-31307210 | MS.gene23829:intron | 20.0% |
| ! | AAAGAAAATATGATTCCAAC+GGG | + | chr8.4:31307352-31307371 | MS.gene23829:CDS | 25.0% |
| ! | ATAACCTATGAAGGTTTAAT+TGG | - | chr8.4:31307007-31307026 | None:intergenic | 25.0% |
| ! | ATCAGGGAAAGAAAAAAATT+GGG | - | chr8.4:31306678-31306697 | None:intergenic | 25.0% |
| ! | TATCAGGGAAAGAAAAAAAT+TGG | - | chr8.4:31306679-31306698 | None:intergenic | 25.0% |
| ! | TGCCAGAAAAGTTAAAATAA+TGG | - | chr8.4:31306767-31306786 | None:intergenic | 25.0% |
| ! | TTAAAATAATGGCCAATAAG+TGG | - | chr8.4:31306756-31306775 | None:intergenic | 25.0% |
| !! | GTATTAGTTTATTTGTGATG+GGG | + | chr8.4:31307193-31307212 | MS.gene23829:intron | 25.0% |
| ATCTCCAATTAAACCTTCAT+AGG | + | chr8.4:31307000-31307019 | MS.gene23829:intron | 30.0% | |
| CATAATATGTTGGAACAACT+GGG | - | chr8.4:31307461-31307480 | None:intergenic | 30.0% | |
| TCAGGGAAAGAAAAAAATTG+GGG | - | chr8.4:31306677-31306696 | None:intergenic | 30.0% | |
| TTCTGGCAATGATATTCTTA+CGG | + | chr8.4:31306779-31306798 | MS.gene23829:intron | 30.0% | |
| ! | AAGGAAGTATGTAAGATCAA+TGG | - | chr8.4:31306237-31306256 | None:intergenic | 30.0% |
| !!! | GGCCATTATTTTAACTTTTC+TGG | + | chr8.4:31306762-31306781 | MS.gene23829:intron | 30.0% |
| AAACCATGCACATATTCATC+TGG | - | chr8.4:31307327-31307346 | None:intergenic | 35.0% | |
| CCAGTTGTTCCAACATATTA+TGG | + | chr8.4:31307459-31307478 | MS.gene23829:CDS | 35.0% | |
| CCATAATATGTTGGAACAAC+TGG | - | chr8.4:31307462-31307481 | None:intergenic | 35.0% | |
| CTCATTTCTACTCCACTTAT+TGG | + | chr8.4:31306741-31306760 | MS.gene23829:intron | 35.0% | |
| GTTGTTCCAACATATTATGG+AGG | + | chr8.4:31307462-31307481 | MS.gene23829:CDS | 35.0% | |
| ! | TATTTGTGATGGGGATGATT+AGG | + | chr8.4:31307202-31307221 | MS.gene23829:CDS | 35.0% |
| !! | AAGATATGGGTATTGATGGA+GGG | - | chr8.4:31306265-31306284 | None:intergenic | 35.0% |
| !! | AGTTGGTAGTGATCATTTGA+TGG | - | chr8.4:31306391-31306410 | None:intergenic | 35.0% |
| !! | GATGAAGATATGGGTATTGA+TGG | - | chr8.4:31306269-31306288 | None:intergenic | 35.0% |
| !! | GTTGGTAGTGATCATTTGAT+GGG | - | chr8.4:31306390-31306409 | None:intergenic | 35.0% |
| ATGGTGTTTGATCCTGGTAA+CGG | - | chr8.4:31306464-31306483 | None:intergenic | 40.0% | |
| CATGCACATATTCATCTGGT+AGG | - | chr8.4:31307323-31307342 | None:intergenic | 40.0% | |
| CTACCAGATGAATATGTGCA+TGG | + | chr8.4:31307321-31307340 | MS.gene23829:CDS | 40.0% | |
| GCTTCTCCTCCATAATATGT+TGG | - | chr8.4:31307471-31307490 | None:intergenic | 40.0% | |
| GGATGATTAGGTATGGACAA+GGG | + | chr8.4:31307214-31307233 | MS.gene23829:CDS | 40.0% | |
| GGTGCAACAGATGAAGATAT+GGG | - | chr8.4:31306278-31306297 | None:intergenic | 40.0% | |
| GTAAGATCAATGGTCTCCAT+AGG | - | chr8.4:31306227-31306246 | None:intergenic | 40.0% | |
| TAGTGATCATTTGATGGGAC+TGG | - | chr8.4:31306385-31306404 | None:intergenic | 40.0% | |
| TGCTAACAATGATCCTGCAA+AGG | + | chr8.4:31307419-31307438 | MS.gene23829:CDS | 40.0% | |
| TGGTGCAACAGATGAAGATA+TGG | - | chr8.4:31306279-31306298 | None:intergenic | 40.0% | |
| ! | TGATGATGAGTTTATCCCGT+TGG | - | chr8.4:31307370-31307389 | None:intergenic | 40.0% |
| !! | AGATATGGGTATTGATGGAG+GGG | - | chr8.4:31306264-31306283 | None:intergenic | 40.0% |
| !! | AGTTGATTTGGAGCTTCGTT+TGG | + | chr8.4:31307569-31307588 | MS.gene23829:CDS | 40.0% |
| !! | ATGGTAAGGTAGTTTGGTGT+TGG | - | chr8.4:31306343-31306362 | None:intergenic | 40.0% |
| !! | GAAGATATGGGTATTGATGG+AGG | - | chr8.4:31306266-31306285 | None:intergenic | 40.0% |
| !! | GCATAGCTTTGAACTTGTTG+TGG | - | chr8.4:31307282-31307301 | None:intergenic | 40.0% |
| !! | GTTGATTTGGAGCTTCGTTT+GGG | + | chr8.4:31307570-31307589 | MS.gene23829:CDS | 40.0% |
| !! | TGGTGATGGAGAAGTTGATT+TGG | + | chr8.4:31307557-31307576 | MS.gene23829:CDS | 40.0% |
| !! | TTGATTTGGAGCTTCGTTTG+GGG | + | chr8.4:31307571-31307590 | MS.gene23829:CDS | 40.0% |
| !! | TTGGTGGTGAAGATTAGGAT+TGG | - | chr8.4:31306324-31306343 | None:intergenic | 40.0% |
| AATGGCATGGTGTTTGATCC+TGG | - | chr8.4:31306470-31306489 | None:intergenic | 45.0% | |
| ACTACCAACTGTCCTCAATC+TGG | + | chr8.4:31306401-31306420 | MS.gene23829:CDS | 45.0% | |
| ACTACCTTACCATCAGCTCA+AGG | + | chr8.4:31306350-31306369 | MS.gene23829:CDS | 45.0% | |
| AGAGTGAGAGTTTCCTTTGC+AGG | - | chr8.4:31307435-31307454 | None:intergenic | 45.0% | |
| AGTTCCAGATTGAGGACAGT+TGG | - | chr8.4:31306408-31306427 | None:intergenic | 45.0% | |
| ATGGTGGTAGCCTAATTGCT+AGG | + | chr8.4:31306429-31306448 | MS.gene23829:CDS | 45.0% | |
| GAGCTGATGGTAAGGTAGTT+TGG | - | chr8.4:31306349-31306368 | None:intergenic | 45.0% | |
| GGGATGATTAGGTATGGACA+AGG | + | chr8.4:31307213-31307232 | MS.gene23829:CDS | 45.0% | |
| TGATCATTTGATGGGACTGG+TGG | - | chr8.4:31306382-31306401 | None:intergenic | 45.0% | |
| TGGTGGTAGCCTAATTGCTA+GGG | + | chr8.4:31306430-31306449 | MS.gene23829:CDS | 45.0% | |
| TTAGGTATGGACAAGGGAGA+TGG | + | chr8.4:31307220-31307239 | MS.gene23829:CDS | 45.0% | |
| ! | GCTATGCTGCTAGTTTCTTC+AGG | + | chr8.4:31307295-31307314 | MS.gene23829:CDS | 45.0% |
| ! | GTGATGGGGATGATTAGGTA+TGG | + | chr8.4:31307207-31307226 | MS.gene23829:CDS | 45.0% |
| ! | TGTCCTCAATCTGGAACTCA+TGG | + | chr8.4:31306410-31306429 | MS.gene23829:CDS | 45.0% |
| !! | GTAAGGTAGTTTGGTGTTGG+TGG | - | chr8.4:31306340-31306359 | None:intergenic | 45.0% |
| !! | TGGTGTTGGTGGTGAAGATT+AGG | - | chr8.4:31306329-31306348 | None:intergenic | 45.0% |
| !! | TGTTTGATCCTGGTAACGGT+CGG | - | chr8.4:31306460-31306479 | None:intergenic | 45.0% |
| !! | AAAAATAATAATTAGATTTA+AGG | - | chr8.4:31306558-31306577 | None:intergenic | 5.0% |
| !!! | AATTTAAATATCAAATTTTA+AGG | - | chr8.4:31307095-31307114 | None:intergenic | 5.0% |
| AACACCATGCCATTCCCAAG+TGG | + | chr8.4:31306476-31306495 | MS.gene23829:CDS | 50.0% | |
| ACCATGTGCCTAGATCCACT+TGG | - | chr8.4:31306494-31306513 | None:intergenic | 50.0% | |
| AGATCCACTTGGGAATGGCA+TGG | - | chr8.4:31306483-31306502 | None:intergenic | 50.0% | |
| CCACCATGAGTTCCAGATTG+AGG | - | chr8.4:31306416-31306435 | None:intergenic | 50.0% | |
| CCATGTGCCTAGATCCACTT+GGG | - | chr8.4:31306493-31306512 | None:intergenic | 50.0% | |
| GATCTAGGCACATGGTGTCT+TGG | + | chr8.4:31306498-31306517 | MS.gene23829:CDS | 50.0% | |
| GTCGGAGAACCCTAGCAATT+AGG | - | chr8.4:31306442-31306461 | None:intergenic | 50.0% | |
| GTGTCCTTGAGCTGATGGTA+AGG | - | chr8.4:31306357-31306376 | None:intergenic | 50.0% | |
| TGCCATTCCCAAGTGGATCT+AGG | + | chr8.4:31306483-31306502 | MS.gene23829:CDS | 50.0% | |
| TGCCTAGATCCACTTGGGAA+TGG | - | chr8.4:31306488-31306507 | None:intergenic | 50.0% | |
| ! | CCTCAATCTGGAACTCATGG+TGG | + | chr8.4:31306413-31306432 | MS.gene23829:CDS | 50.0% |
| ! | GTATTGATGGAGGGGAGTCA+AGG | - | chr8.4:31306256-31306275 | None:intergenic | 50.0% |
| ACTTCCATGACTCCGCCTAG+TGG | + | chr8.4:31307528-31307547 | MS.gene23829:CDS | 55.0% | |
| CCATCACCAGCTGAACCACT+AGG | - | chr8.4:31307546-31307565 | None:intergenic | 55.0% | |
| CCCAAGTGGATCTAGGCACA+TGG | + | chr8.4:31306490-31306509 | MS.gene23829:CDS | 55.0% | |
| CCTAGTGGTTCAGCTGGTGA+TGG | + | chr8.4:31307543-31307562 | MS.gene23829:CDS | 55.0% | |
| TCACCAGCTGAACCACTAGG+CGG | - | chr8.4:31307543-31307562 | None:intergenic | 55.0% | |
| TGAACCACTAGGCGGAGTCA+TGG | - | chr8.4:31307535-31307554 | None:intergenic | 55.0% | |
| TGGTCGTGTCCTTGAGCTGA+TGG | - | chr8.4:31306362-31306381 | None:intergenic | 55.0% | |
| ACTCCGCCTAGTGGTTCAGC+TGG | + | chr8.4:31307537-31307556 | MS.gene23829:CDS | 60.0% | |
| AGGGTTCTCCGACCGTTACC+AGG | + | chr8.4:31306449-31306468 | MS.gene23829:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 31306221 | 31307602 | 31306221 | ID=MS.gene23829 |
| chr8.4 | mRNA | 31306221 | 31307602 | 31306221 | ID=MS.gene23829.t1;Parent=MS.gene23829 |
| chr8.4 | exon | 31306221 | 31306537 | 31306221 | ID=MS.gene23829.t1.exon1;Parent=MS.gene23829.t1 |
| chr8.4 | CDS | 31306221 | 31306537 | 31306221 | ID=cds.MS.gene23829.t1;Parent=MS.gene23829.t1 |
| chr8.4 | exon | 31307200 | 31307602 | 31307200 | ID=MS.gene23829.t1.exon2;Parent=MS.gene23829.t1 |
| chr8.4 | CDS | 31307200 | 31307602 | 31307200 | ID=cds.MS.gene23829.t1;Parent=MS.gene23829.t1 |
| Gene Sequence |
| Protein sequence |
