AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23846

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23846.t1 MTR_8g072590 78.750 640 103 8 5 618 26 658 0.0 1000
MS.gene23846.t1 MTR_8g073190 49.645 705 223 21 15 608 49 732 0.0 593
MS.gene23846.t1 MTR_5g024510 35.405 740 317 22 15 608 65 789 8.81e-119 377
MS.gene23846.t1 MTR_5g024510 34.512 707 302 22 15 575 65 756 1.83e-106 341
MS.gene23846.t1 MTR_5g024510 34.222 675 287 20 79 608 5 667 1.94e-98 320
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23846.t1 AT2G17520 42.945 326 126 9 340 606 399 723 1.03e-68 241
MS.gene23846.t1 AT5G24360 41.195 318 133 7 342 606 433 749 7.73e-64 228
MS.gene23846.t1 AT5G24360 41.824 318 131 8 342 606 447 763 8.22e-64 228
MS.gene23846.t1 AT5G24360 41.195 318 133 7 342 606 453 769 8.58e-64 228
MS.gene23846.t1 AT3G11870 34.277 318 148 14 347 606 113 427 1.25e-31 130

Find 151 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACGTCGGGATCAGGATTT+TGG 0.142257 8.4:-31496400 MS.gene23846:CDS
AGCATACAAAACTCATTCTA+AGG 0.255054 8.4:-31493234 MS.gene23846:CDS
TTGTTGAAAAGGAAAATATT+AGG 0.257697 8.4:-31493430 MS.gene23846:CDS
TCAATTCCTTGATGCTGCTC+TGG 0.258221 8.4:+31494666 None:intergenic
CAATGATCATGATGGTAATA+TGG 0.262900 8.4:-31496114 MS.gene23846:CDS
TTTGTCAAGTATGGTGTAAA+AGG 0.281976 8.4:+31493281 None:intergenic
TTTCAAGTTGAAGCCAAAAC+TGG 0.285507 8.4:-31496533 MS.gene23846:CDS
TATAATGGAGAAGCTGTAAT+TGG 0.296066 8.4:-31496575 MS.gene23846:CDS
TCCTAGATGAAGCACGGATA+TGG 0.296567 8.4:+31495177 None:intergenic
TTCTGCATATCATGAGTTAA+AGG 0.297925 8.4:+31493320 None:intergenic
TGATGTTCCTTGACCACAAT+TGG 0.301365 8.4:+31493455 None:intergenic
CAATTCCTTGATGCTGCTCT+GGG 0.308125 8.4:+31494667 None:intergenic
CATTTGGAGATGATCATCTT+TGG 0.309328 8.4:-31494575 MS.gene23846:CDS
TACTTGTAACTTAAATGATT+TGG 0.312272 8.4:-31495601 MS.gene23846:CDS
CAATGATTTACCTTAGATTC+TGG 0.314537 8.4:+31494457 None:intergenic
AAACTCTCTTCTGGGAATTC+CGG 0.326031 8.4:+31493522 None:intergenic
TGTACTGATCGACCCAGTTT+TGG 0.328410 8.4:+31496520 None:intergenic
CCTATCATAATTTCATATAA+TGG 0.329824 8.4:-31496590 MS.gene23846:CDS
ACGTGTTGCGTGTCCTCAAT+TGG 0.332292 8.4:+31493386 None:intergenic
CCAACCTGTACAGTAGGATT+TGG 0.344486 8.4:+31494695 None:intergenic
CCATTATATGAAATTATGAT+AGG 0.350325 8.4:+31496590 None:intergenic
GCTGCAGACATATTCAGTTT+AGG 0.353862 8.4:-31494636 MS.gene23846:CDS
TGTTGAAAAGGAAAATATTA+GGG 0.360331 8.4:-31493429 MS.gene23846:CDS
AACTTTAATGAAGGTGTTGA+TGG 0.366845 8.4:-31495849 MS.gene23846:CDS
TCGAAAAGATCTTTCCTTAG+TGG 0.367434 8.4:-31494529 MS.gene23846:CDS
TACTGTTATCTCGTGGTAAA+GGG 0.368275 8.4:-31495921 MS.gene23846:CDS
CGCCGCTGATCAATATTTAT+AGG 0.370078 8.4:-31496451 MS.gene23846:CDS
ACCTTCCATTCTTCCTTCCC+TGG 0.372121 8.4:+31495784 None:intergenic
GTAGATGGCCACAAAATAAA+TGG 0.373510 8.4:+31497032 None:intergenic
TAAACCCTGACCAGAATCTA+AGG 0.378020 8.4:-31494467 MS.gene23846:intron
AGAAGCCGCTTGACTGCAAC+TGG 0.379342 8.4:+31495750 None:intergenic
CTTGATTATTAGAACATTTG+AGG 0.381115 8.4:+31495133 None:intergenic
ACTTCTCTATTATTATCCTT+TGG 0.382863 8.4:+31495879 None:intergenic
GGCATTAACCAACATGTTCC+TGG 0.384010 8.4:-31495077 MS.gene23846:intron
TTCCTTAGTGGAGTTCATTC+CGG 0.386781 8.4:-31494517 MS.gene23846:CDS
CATGGGACCATTCTCGTAGA+TGG 0.392921 8.4:+31497017 None:intergenic
CTAATAAGATCCTCAGCTTC+CGG 0.400149 8.4:+31494498 None:intergenic
GTCCTCAATTGGGTCATCAT+TGG 0.400160 8.4:+31493397 None:intergenic
GGAACATCAGATTGTTGAAA+AGG 0.408020 8.4:-31493441 MS.gene23846:CDS
CTCACTGAGAGTGATTTAAT+AGG 0.420528 8.4:-31496026 MS.gene23846:CDS
CTACTGTTATCTCGTGGTAA+AGG 0.421446 8.4:-31495922 MS.gene23846:CDS
ACTAAGGGAAGCCATCCATT+TGG 0.421454 8.4:-31494591 MS.gene23846:CDS
GATGGTCCCACGTCGGGATC+AGG 0.425123 8.4:-31496407 MS.gene23846:CDS
CGTTGAGGTTTCACCTGATC+AGG 0.426933 8.4:-31493366 MS.gene23846:CDS
CCATGCCATTTGACAATGTT+CGG 0.427560 8.4:+31495669 None:intergenic
ATTTACCTTAGATTCTGGTC+AGG 0.428433 8.4:+31494462 None:intergenic
GTCGGTGTCCGTGTCGTGTC+CGG 0.429465 8.4:-31495209 MS.gene23846:CDS
ATTGGCCAGGGAAGGAAGAA+TGG 0.434234 8.4:-31495789 MS.gene23846:CDS
GTCAGAAAGCTTTACACATA+AGG 0.445083 8.4:+31495103 None:intergenic
AGTTCACATGGTGCTTATCA+TGG 0.451030 8.4:-31496212 MS.gene23846:CDS
AAACTGTTTGCCGCACCTGA+TGG 0.455756 8.4:-31497057 MS.gene23846:CDS
AACTGTTTGCCGCACCTGAT+GGG 0.457845 8.4:-31497056 MS.gene23846:CDS
ACCTGCTCTTGTACCTGATC+AGG 0.458556 8.4:+31493353 None:intergenic
TTCGCCAAATCCTACTGTAC+AGG 0.462671 8.4:-31494699 MS.gene23846:CDS
GCTTGATACGAGCTGTAGAT+TGG 0.462728 8.4:+31496964 None:intergenic
CTCAAATGTTCTAATAATCA+AGG 0.464837 8.4:-31495132 MS.gene23846:CDS
TAGTATGTTCGTTATTCTGT+TGG 0.467334 8.4:-31495958 MS.gene23846:CDS
CGTGTTGCGTGTCCTCAATT+GGG 0.472776 8.4:+31493387 None:intergenic
AAAGGAAAATATTAGGGTTG+AGG 0.475152 8.4:-31493423 MS.gene23846:CDS
TGCAACACTTCAACCGCGTT+CGG 0.475607 8.4:+31493557 None:intergenic
TCCATATCCGTGCTTCATCT+AGG 0.476146 8.4:-31495178 MS.gene23846:CDS
GGTGTTGATGGAGAAATAAT+TGG 0.476448 8.4:-31495837 MS.gene23846:CDS
AAGTATGATGGTCCCACGTC+GGG 0.481203 8.4:-31496413 MS.gene23846:CDS
TTTGTGGCCATCTACGAGAA+TGG 0.482936 8.4:-31497024 MS.gene23846:CDS
GGATAAGTACTACGGCAAAC+TGG 0.485253 8.4:-31496887 MS.gene23846:intron
ACAAAATAAATGGTCCCATC+AGG 0.485253 8.4:+31497042 None:intergenic
CATCTCCAACGCTGAAATGA+AGG 0.486389 8.4:-31493205 None:intergenic
GATGTTCCTTGACCACAATT+GGG 0.486905 8.4:+31493456 None:intergenic
AAAAGATGAAAGTTCTCCCC+TGG 0.489626 8.4:-31497329 None:intergenic
ACCTGATCAGGTACAAGAGC+AGG 0.499859 8.4:-31493354 MS.gene23846:CDS
ATTTGACAATGTTCGGATGA+TGG 0.500705 8.4:+31495676 None:intergenic
AGGAAGAATGGAAGGTATGA+TGG 0.501897 8.4:-31495777 MS.gene23846:CDS
CTTCATTTCAGCGTTGGAGA+TGG 0.502144 8.4:+31493206 None:intergenic
CTTTATTTCCAGGCCGAACG+CGG 0.502632 8.4:-31493570 MS.gene23846:intron
AATTAGCTCCGTCTTGTCAA+TGG 0.505215 8.4:+31493484 None:intergenic
TTTGATGCATTTAGATTCCC+AGG 0.505866 8.4:+31496476 None:intergenic
TGCTTCTTTAGACATGGGTA+AGG 0.508181 8.4:+31496287 None:intergenic
ATGGTCCCATGAGGATATTA+TGG 0.514333 8.4:-31497005 MS.gene23846:CDS
ATCATCCGAACATTGTCAAA+TGG 0.518090 8.4:-31495674 MS.gene23846:CDS
CAAATCCTACTGTACAGGTT+GGG 0.523128 8.4:-31494694 MS.gene23846:CDS
TACAGCTCGTATCAAGCTCC+CGG 0.524482 8.4:-31496958 MS.gene23846:CDS
GGGAACCTTCATTTCAGCGT+TGG 0.528357 8.4:+31493200 None:intergenic
CCAAATCCTACTGTACAGGT+TGG 0.530465 8.4:-31494695 MS.gene23846:CDS
ATGTGTAAAGCTTTCTGACA+TGG 0.538576 8.4:-31495099 MS.gene23846:CDS
GAATGACCATAATATCCTCA+TGG 0.539079 8.4:+31496999 None:intergenic
TTCAAGTTGAAGCCAAAACT+GGG 0.539809 8.4:-31496532 MS.gene23846:CDS
CCGAACATTGTCAAATGGCA+TGG 0.540381 8.4:-31495669 MS.gene23846:CDS
TGATGACCCAATTGTGGTCA+AGG 0.540711 8.4:-31493462 MS.gene23846:CDS
GCTGATCAATATTTATAGGA+AGG 0.544626 8.4:-31496447 MS.gene23846:CDS
TTTACCTTAGATTCTGGTCA+GGG 0.545376 8.4:+31494463 None:intergenic
ATTTGAACAAGAAGAGTGGA+TGG 0.546110 8.4:-31495995 MS.gene23846:CDS
AACAGAATAACGAACATACT+AGG 0.547666 8.4:+31495960 None:intergenic
TACAACAAAATAATTACAAG+AGG 0.548877 8.4:-31496070 MS.gene23846:CDS
CACGGACACCGGACACGACA+CGG 0.549242 8.4:+31495201 None:intergenic
ATCCAATGATGACCCAATTG+AGG 0.551001 8.4:-31493399 MS.gene23846:CDS
AATTAGTTGTGTCGGCGAGT+CGG 0.551403 8.4:-31495227 MS.gene23846:intron
TGTTGTAGAAAAGGCGTAGG+AGG 0.551767 8.4:+31496086 None:intergenic
TGAATCATCATATCTGAGGC+AGG 0.554368 8.4:+31496164 None:intergenic
TGTGTAAAGCTTTCTGACAT+GGG 0.554737 8.4:-31495098 MS.gene23846:CDS
ACGGATATGGACACGGACAC+CGG 0.558040 8.4:+31495190 None:intergenic
TGGGACCATCATACTTCAGA+TGG 0.558649 8.4:+31496420 None:intergenic
TTCCGGAATGAACTCCACTA+AGG 0.560655 8.4:+31494515 None:intergenic
CAAAGATGATCATCTCCAAA+TGG 0.562429 8.4:+31494576 None:intergenic
GATTTCCATCTGAAGTATGA+TGG 0.568462 8.4:-31496425 MS.gene23846:CDS
GGATGATTGGTCATTGTACA+AGG 0.571953 8.4:-31496911 MS.gene23846:CDS
GGCTTCAACTTGAAACGAAG+TGG 0.576742 8.4:+31496541 None:intergenic
AAGTACAACGCTCCATTGCA+AGG 0.577100 8.4:+31495619 None:intergenic
TCATACTACATTTCATGTAG+AGG 0.581193 8.4:-31496327 MS.gene23846:CDS
GATGATCATCTCCAAATGGA+TGG 0.581367 8.4:+31494580 None:intergenic
TGAGGACACGCAACACGTTG+AGG 0.586843 8.4:-31493381 MS.gene23846:CDS
ACTTGACACCATTGACAAGA+CGG 0.588279 8.4:-31493492 MS.gene23846:CDS
ATATTATGGTCATTCTCCAC+AGG 0.591103 8.4:-31496991 MS.gene23846:CDS
CGAAATCAGAACACTTATGT+CGG 0.592650 8.4:-31495700 MS.gene23846:CDS
GTCAACCAGTTGCAGTCAAG+CGG 0.593335 8.4:-31495755 MS.gene23846:CDS
GCATACAAAACTCATTCTAA+GGG 0.594060 8.4:-31493233 MS.gene23846:CDS
GCCAGGGAAGGAAGAATGGA+AGG 0.594266 8.4:-31495785 MS.gene23846:CDS
GTTTATTTGAACAAGAAGAG+TGG 0.596440 8.4:-31495999 MS.gene23846:CDS
GTATCGATGAACTTTAATGA+AGG 0.598118 8.4:-31495858 MS.gene23846:CDS
GCTAATTGATGACCCAATTG+TGG 0.601747 8.4:-31493468 MS.gene23846:CDS
TACAAGGAGGATAAGTACTA+CGG 0.605030 8.4:-31496895 MS.gene23846:CDS
ATAACGAACATACTAGGTGA+TGG 0.607629 8.4:+31495966 None:intergenic
GGCTTCCCAACCTGTACAGT+AGG 0.608756 8.4:+31494689 None:intergenic
GCTGTAGATTGGCGATCCTG+TGG 0.610761 8.4:+31496975 None:intergenic
TTCACTCTACTGTTATCTCG+TGG 0.612175 8.4:-31495928 MS.gene23846:CDS
ATGTAGTATGAATCTGATGA+TGG 0.613561 8.4:+31496339 None:intergenic
AATGACCATAATATCCTCAT+GGG 0.614134 8.4:+31497000 None:intergenic
ATCATGTCTACAGATAATAG+TGG 0.614510 8.4:-31496642 MS.gene23846:intron
CTTCATCTAGGAATAATGCA+TGG 0.615574 8.4:-31495166 MS.gene23846:CDS
TAATAATACAAAATCAAACT+CGG 0.615612 8.4:+31496364 None:intergenic
CATTGTCAAATGGCATGGAG+TGG 0.616032 8.4:-31495664 MS.gene23846:CDS
AACATACTAGGTGATGGAGT+TGG 0.616054 8.4:+31495972 None:intergenic
CCAAAATCCTGATCCCGACG+TGG 0.618016 8.4:+31496400 None:intergenic
CATTATTCCTAGATGAAGCA+CGG 0.618047 8.4:+31495171 None:intergenic
TAAGTATAAGTATATACCAA+AGG 0.620241 8.4:-31495895 MS.gene23846:CDS
CTATAAATATTGATCAGCGG+CGG 0.621060 8.4:+31496452 None:intergenic
GAAGCCCCAGAGCAGCATCA+AGG 0.621107 8.4:-31494672 MS.gene23846:CDS
GGAGTTCATTCCGGAAGCTG+AGG 0.621667 8.4:-31494508 MS.gene23846:CDS
ACTGTTATCTCGTGGTAAAG+GGG 0.626737 8.4:-31495920 MS.gene23846:CDS
CAACTGAATCATCATATCTG+AGG 0.628170 8.4:+31496160 None:intergenic
ATTAAATCACTCTCAGTGAG+AGG 0.629080 8.4:+31496029 None:intergenic
AGTGCTTACCAGGAACATGT+TGG 0.639292 8.4:+31495069 None:intergenic
AATTCCTTGATGCTGCTCTG+GGG 0.641432 8.4:+31494668 None:intergenic
GAAGTATGATGGTCCCACGT+CGG 0.643813 8.4:-31496414 MS.gene23846:CDS
TTCCTATAAATATTGATCAG+CGG 0.646777 8.4:+31496449 None:intergenic
ATAAATGGTCCCATCAGGTG+CGG 0.657978 8.4:+31497047 None:intergenic
TTAATCAGTGAAAGTTCACA+TGG 0.660628 8.4:-31496224 MS.gene23846:CDS
TCATGATATGCAGAACAATG+AGG 0.672843 8.4:-31493312 MS.gene23846:CDS
ATGAAGCACGGATATGGACA+CGG 0.675951 8.4:+31495183 None:intergenic
CAAAATCCTGATCCCGACGT+GGG 0.684562 8.4:+31496401 None:intergenic
TGATTGGTCATTGTACAAGG+AGG 0.729224 8.4:-31496908 MS.gene23846:CDS
TCTACGAGAATGGTCCCATG+AGG 0.737091 8.4:-31497014 MS.gene23846:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTCATAACATTAAT+AGG + chr8.4:31496220-31496239 None:intergenic 10.0%
!! TTGAAAATAAAACAAAAATT+AGG + chr8.4:31495645-31495664 None:intergenic 10.0%
!!! CAATATAATAACTAATTTTT+GGG + chr8.4:31496667-31496686 None:intergenic 10.0%
!!! TTTATAAAAAGTTTAAAGTT+CGG - chr8.4:31496510-31496529 MS.gene23846:CDS 10.0%
!! AAAAAGAAGAGAAATAATAA+AGG + chr8.4:31496898-31496917 None:intergenic 15.0%
!! AAATTAGTTATTATATTGCA+TGG - chr8.4:31496669-31496688 MS.gene23846:intron 15.0%
!! AATTTGAAAAGAAAACAATT+AGG + chr8.4:31495704-31495723 None:intergenic 15.0%
!! AGATTAATGTTATCAAAATA+GGG + chr8.4:31496263-31496282 None:intergenic 15.0%
!! TAAACAATATAAAGAGAAAA+AGG + chr8.4:31495797-31495816 None:intergenic 15.0%
!! TAATAATACAAAATCAAACT+CGG + chr8.4:31494171-31494190 None:intergenic 15.0%
!! TAGATTAATGTTATCAAAAT+AGG + chr8.4:31496264-31496283 None:intergenic 15.0%
!!! GCAATATAATAACTAATTTT+TGG + chr8.4:31496668-31496687 None:intergenic 15.0%
!!! GTAGTTTTATTTGTTTTTAT+TGG - chr8.4:31496286-31496305 MS.gene23846:CDS 15.0%
!!! GTTATATATTATCTTTTGAA+GGG - chr8.4:31496483-31496502 MS.gene23846:CDS 15.0%
!!! TAATTATTTTGTTGTAGAAA+AGG + chr8.4:31494458-31494477 None:intergenic 15.0%
!!! TATTTTTTTTGAGGAAATTT+GGG - chr8.4:31493845-31493864 MS.gene23846:intron 15.0%
!!! TGTTATATATTATCTTTTGA+AGG - chr8.4:31496482-31496501 MS.gene23846:CDS 15.0%
!!! TTATTTTTTTTGAGGAAATT+TGG - chr8.4:31493844-31493863 MS.gene23846:intron 15.0%
!! AGACTAAGATTTATTAAGAT+AGG - chr8.4:31496339-31496358 MS.gene23846:CDS 20.0%
!! ATCTTAATAAATCTTAGTCT+TGG + chr8.4:31496339-31496358 None:intergenic 20.0%
!! CCATTATATGAAATTATGAT+AGG + chr8.4:31493945-31493964 None:intergenic 20.0%
!! CCTATCATAATTTCATATAA+TGG - chr8.4:31493942-31493961 MS.gene23846:intron 20.0%
!! CTCTTTATATTGTTTAAACA+GGG - chr8.4:31495801-31495820 MS.gene23846:CDS 20.0%
!! TAAGTATAAGTATATACCAA+AGG - chr8.4:31494637-31494656 MS.gene23846:CDS 20.0%
!! TACAACAAAATAATTACAAG+AGG - chr8.4:31494462-31494481 MS.gene23846:intron 20.0%
!! TACTTGTAACTTAAATGATT+TGG - chr8.4:31494931-31494950 MS.gene23846:intron 20.0%
!! TAGAACATTGTAATTGTAAT+TGG - chr8.4:31493675-31493694 MS.gene23846:intron 20.0%
!! TATGTTGTATCAAATGATTA+AGG - chr8.4:31496173-31496192 MS.gene23846:CDS 20.0%
!! TCTAAAAAAATTAGTTGTGT+CGG - chr8.4:31495297-31495316 MS.gene23846:intron 20.0%
!! TCTCTTTATATTGTTTAAAC+AGG - chr8.4:31495800-31495819 MS.gene23846:CDS 20.0%
!! TGTTGAAAAGGAAAATATTA+GGG - chr8.4:31497103-31497122 MS.gene23846:intron 20.0%
!! TTGTTGAAAAGGAAAATATT+AGG - chr8.4:31497102-31497121 MS.gene23846:intron 20.0%
!!! ACAAATAATAAGAATTTTGC+TGG - chr8.4:31494032-31494051 MS.gene23846:intron 20.0%
!!! TTTAGTCTTTTGTATCAAAT+TGG - chr8.4:31496829-31496848 MS.gene23846:intron 20.0%
! AAGAAAAAGAGTTGTTAGAA+CGG + chr8.4:31493299-31493318 None:intergenic 25.0%
! ACTTCTCTATTATTATCCTT+TGG + chr8.4:31494656-31494675 None:intergenic 25.0%
! CATAACATTAATAGGTATGT+TGG + chr8.4:31496212-31496231 None:intergenic 25.0%
! CTCAAATGTTCTAATAATCA+AGG - chr8.4:31495400-31495419 MS.gene23846:intron 25.0%
! CTTCTACTCCTAAATAAATA+GGG + chr8.4:31496774-31496793 None:intergenic 25.0%
! CTTGATTATTAGAACATTTG+AGG + chr8.4:31495402-31495421 None:intergenic 25.0%
! CTTGATTTCCCTATTTATTT+AGG - chr8.4:31496763-31496782 MS.gene23846:intron 25.0%
! CTTTATCGATAATATATGCT+AGG - chr8.4:31493325-31493344 MS.gene23846:CDS 25.0%
! TAAAAATGAAACTCTCTTCT+GGG + chr8.4:31497021-31497040 None:intergenic 25.0%
! TAAATCATTGTCATTCATTG+TGG - chr8.4:31496088-31496107 MS.gene23846:CDS 25.0%
! TGCTTCTGTAAATTACAATA+TGG - chr8.4:31495558-31495577 MS.gene23846:intron 25.0%
! TTCCTATAAATATTGATCAG+CGG + chr8.4:31494086-31494105 None:intergenic 25.0%
! TTCGTTTCAAAAAAAGAGAT+TGG - chr8.4:31494725-31494744 MS.gene23846:intron 25.0%
! TTGAAAAATCTATCGAAATC+AGG + chr8.4:31494401-31494420 None:intergenic 25.0%
!! AGATTATTTCCTTTATTTCC+AGG - chr8.4:31496952-31496971 MS.gene23846:CDS 25.0%
!! ATTCTATATCAATTAGCTCT+TGG - chr8.4:31495669-31495688 MS.gene23846:CDS 25.0%
!! TTCTATATCAATTAGCTCTT+GGG - chr8.4:31495670-31495689 MS.gene23846:CDS 25.0%
!!! AGATTTTATTTACCTTGCAA+TGG - chr8.4:31494901-31494920 MS.gene23846:intron 25.0%
!!! AGATTTTTCAATGATCATGA+TGG - chr8.4:31494410-31494429 MS.gene23846:intron 25.0%
!!! ATTTTTGTTTTGCAACTTAG+GGG - chr8.4:31495125-31495144 MS.gene23846:CDS 25.0%
!!! CATTTTTGTTTTGCAACTTA+GGG - chr8.4:31495124-31495143 MS.gene23846:CDS 25.0%
!!! CTTTTTTTCTGTTTGACTAA+GGG - chr8.4:31495926-31495945 MS.gene23846:CDS 25.0%
!!! TCTTTTTTTCTGTTTGACTA+AGG - chr8.4:31495925-31495944 MS.gene23846:CDS 25.0%
!!! TTTTGTTTCTTTGTCAAGTA+TGG + chr8.4:31497263-31497282 None:intergenic 25.0%
AAAGGAAAATATTAGGGTTG+AGG - chr8.4:31497109-31497128 MS.gene23846:intron 30.0%
AACAGAATAACGAACATACT+AGG + chr8.4:31494575-31494594 None:intergenic 30.0%
AACATTAGATTCGATCGATA+TGG + chr8.4:31495732-31495751 None:intergenic 30.0%
AATCTCATGCTAGACATAAT+TGG + chr8.4:31495538-31495557 None:intergenic 30.0%
AATGACCATAATATCCTCAT+GGG + chr8.4:31493535-31493554 None:intergenic 30.0%
ACACGATTATAAACTAATCC+TGG + chr8.4:31496631-31496650 None:intergenic 30.0%
ACATTCACAAGGTAAATGTT+AGG + chr8.4:31495515-31495534 None:intergenic 30.0%
AGCATACAAAACTCATTCTA+AGG - chr8.4:31497298-31497317 MS.gene23846:intron 30.0%
AGGATACTACAGAATATCTT+TGG - chr8.4:31494972-31494991 MS.gene23846:intron 30.0%
ATCATGTCTACAGATAATAG+TGG - chr8.4:31493890-31493909 MS.gene23846:intron 30.0%
ATGTAGTATGAATCTGATGA+TGG + chr8.4:31494196-31494215 None:intergenic 30.0%
ATTTATTTAGGAGTAGAAGC+AGG - chr8.4:31496775-31496794 MS.gene23846:intron 30.0%
CAATGATCATGATGGTAATA+TGG - chr8.4:31494418-31494437 MS.gene23846:intron 30.0%
CAATGATTTACCTTAGATTC+TGG + chr8.4:31496078-31496097 None:intergenic 30.0%
CACGATTATAAACTAATCCT+GGG + chr8.4:31496630-31496649 None:intergenic 30.0%
CCTAAGTTGCAAAACAAAAA+TGG + chr8.4:31495126-31495145 None:intergenic 30.0%
CGATCGAATCTAATGTTATT+CGG - chr8.4:31495735-31495754 MS.gene23846:CDS 30.0%
GAGAAAAAGGTCAATGAATT+TGG + chr8.4:31495784-31495803 None:intergenic 30.0%
GCATACAAAACTCATTCTAA+GGG - chr8.4:31497299-31497318 MS.gene23846:intron 30.0%
GCTGATCAATATTTATAGGA+AGG - chr8.4:31494085-31494104 MS.gene23846:intron 30.0%
GCTTCTACTCCTAAATAAAT+AGG + chr8.4:31496775-31496794 None:intergenic 30.0%
GTAAAAATGAAACTCTCTTC+TGG + chr8.4:31497022-31497041 None:intergenic 30.0%
GTTGTTCATTTGCATAAACT+AGG - chr8.4:31495162-31495181 MS.gene23846:CDS 30.0%
GTTTATTTGAACAAGAAGAG+TGG - chr8.4:31494533-31494552 MS.gene23846:CDS 30.0%
TAAAAATCTTAGTGCTTACC+AGG + chr8.4:31495476-31495495 None:intergenic 30.0%
TAGTATGTTCGTTATTCTGT+TGG - chr8.4:31494574-31494593 MS.gene23846:CDS 30.0%
TCATACTACATTTCATGTAG+AGG - chr8.4:31494205-31494224 MS.gene23846:intron 30.0%
TGCAGTGTAATTATATGTGT+CGG + chr8.4:31495266-31495285 None:intergenic 30.0%
TTAATCAGTGAAAGTTCACA+TGG - chr8.4:31494308-31494327 MS.gene23846:intron 30.0%
TTCTGCATATCATGAGTTAA+AGG + chr8.4:31497215-31497234 None:intergenic 30.0%
TTTAACTCTCTAGCTAATGT+AGG + chr8.4:31493735-31493754 None:intergenic 30.0%
TTTGTCAAGTATGGTGTAAA+AGG + chr8.4:31497254-31497273 None:intergenic 30.0%
! ACTTTTTGCTTCTTTAGACA+TGG + chr8.4:31494254-31494273 None:intergenic 30.0%
! CTTTTTGCTTCTTTAGACAT+GGG + chr8.4:31494253-31494272 None:intergenic 30.0%
! GTATCGATGAACTTTAATGA+AGG - chr8.4:31494674-31494693 MS.gene23846:CDS 30.0%
! TATAATGGAGAAGCTGTAAT+TGG - chr8.4:31493957-31493976 MS.gene23846:intron 30.0%
!! AACTTTAATGAAGGTGTTGA+TGG - chr8.4:31494683-31494702 MS.gene23846:CDS 30.0%
!! AGCTTTAGAGTTTAGATTGA+AGG - chr8.4:31496535-31496554 MS.gene23846:CDS 30.0%
!! CTTAAATGATTTGGTTCAAG+TGG - chr8.4:31494940-31494959 MS.gene23846:intron 30.0%
!!! CCATTTTTGTTTTGCAACTT+AGG - chr8.4:31495123-31495142 MS.gene23846:CDS 30.0%
!!! GTAGTGTTATTTTGCTTCTT+TGG - chr8.4:31496451-31496470 MS.gene23846:CDS 30.0%
!!! TTGAAACGAAGTGGTTTTTT+CGG + chr8.4:31493985-31494004 None:intergenic 30.0%
!!! TTTTTGTTTTGCAACTTAGG+GGG - chr8.4:31495126-31495145 MS.gene23846:CDS 30.0%
AAAAGAGTTGTTAGAACGGA+CGG + chr8.4:31493295-31493314 None:intergenic 35.0%
AAACTAGGAACTATGAAGCA+CGG - chr8.4:31495177-31495196 MS.gene23846:CDS 35.0%
ACAAAATAAATGGTCCCATC+AGG + chr8.4:31493493-31493512 None:intergenic 35.0%
ACTTACAATGTGCACAAGTA+AGG + chr8.4:31495066-31495085 None:intergenic 35.0%
ATAACGAACATACTAGGTGA+TGG + chr8.4:31494569-31494588 None:intergenic 35.0%
ATATTATGGTCATTCTCCAC+AGG - chr8.4:31493541-31493560 MS.gene23846:CDS 35.0%
ATCATCCGAACATTGTCAAA+TGG - chr8.4:31494858-31494877 MS.gene23846:intron 35.0%
ATGTGTAAAGCTTTCTGACA+TGG - chr8.4:31495433-31495452 MS.gene23846:intron 35.0%
ATTAAATCACTCTCAGTGAG+AGG + chr8.4:31494506-31494525 None:intergenic 35.0%
ATTTACCTTAGATTCTGGTC+AGG + chr8.4:31496073-31496092 None:intergenic 35.0%
ATTTGAACAAGAAGAGTGGA+TGG - chr8.4:31494537-31494556 MS.gene23846:CDS 35.0%
ATTTGACAATGTTCGGATGA+TGG + chr8.4:31494859-31494878 None:intergenic 35.0%
CAAAGATGATCATCTCCAAA+TGG + chr8.4:31495959-31495978 None:intergenic 35.0%
CAACTGAATCATCATATCTG+AGG + chr8.4:31494375-31494394 None:intergenic 35.0%
CATTATTCCTAGATGAAGCA+CGG + chr8.4:31495364-31495383 None:intergenic 35.0%
CATTTGGAGATGATCATCTT+TGG - chr8.4:31495957-31495976 MS.gene23846:CDS 35.0%
CGAAATCAGAACACTTATGT+CGG - chr8.4:31494832-31494851 MS.gene23846:intron 35.0%
CTATAAATATTGATCAGCGG+CGG + chr8.4:31494083-31494102 None:intergenic 35.0%
CTCACTGAGAGTGATTTAAT+AGG - chr8.4:31494506-31494525 MS.gene23846:CDS 35.0%
CTCTACTACTAAAACTGATG+AGG - chr8.4:31495018-31495037 MS.gene23846:intron 35.0%
CTTACAATGTGCACAAGTAA+GGG + chr8.4:31495065-31495084 None:intergenic 35.0%
CTTATCCTACTAAGTGAGAT+CGG + chr8.4:31496702-31496721 None:intergenic 35.0%
CTTCATCTAGGAATAATGCA+TGG - chr8.4:31495366-31495385 MS.gene23846:intron 35.0%
GAATGACCATAATATCCTCA+TGG + chr8.4:31493536-31493555 None:intergenic 35.0%
GACATAATTGGACATTCACA+AGG + chr8.4:31495526-31495545 None:intergenic 35.0%
GGAACATCAGATTGTTGAAA+AGG - chr8.4:31497091-31497110 MS.gene23846:intron 35.0%
GTAGATGGCCACAAAATAAA+TGG + chr8.4:31493503-31493522 None:intergenic 35.0%
GTCAGAAAGCTTTACACATA+AGG + chr8.4:31495432-31495451 None:intergenic 35.0%
TACAAGGAGGATAAGTACTA+CGG - chr8.4:31493637-31493656 MS.gene23846:intron 35.0%
TACTGTTATCTCGTGGTAAA+GGG - chr8.4:31494611-31494630 MS.gene23846:CDS 35.0%
TCATGATATGCAGAACAATG+AGG - chr8.4:31497220-31497239 MS.gene23846:intron 35.0%
TCGAAAAGATCTTTCCTTAG+TGG - chr8.4:31496003-31496022 MS.gene23846:CDS 35.0%
TGCTATTGCGTATTTCTTTC+TGG - chr8.4:31496407-31496426 MS.gene23846:CDS 35.0%
TGTGTAAAGCTTTCTGACAT+GGG - chr8.4:31495434-31495453 MS.gene23846:intron 35.0%
TTTACCTTAGATTCTGGTCA+GGG + chr8.4:31496072-31496091 None:intergenic 35.0%
TTTGATGCATTTAGATTCCC+AGG + chr8.4:31494059-31494078 None:intergenic 35.0%
! AAAGATCTTTTCGATCGTTC+AGG + chr8.4:31495997-31496016 None:intergenic 35.0%
! AATAAGAATTTTGCTGGTCC+TGG - chr8.4:31494038-31494057 MS.gene23846:intron 35.0%
! ATAAGAATTTTGCTGGTCCT+GGG - chr8.4:31494039-31494058 MS.gene23846:intron 35.0%
! ATTTGGGATTGATGTTCTGT+TGG - chr8.4:31493861-31493880 MS.gene23846:intron 35.0%
! GATTTCCATCTGAAGTATGA+TGG - chr8.4:31494107-31494126 MS.gene23846:intron 35.0%
! TCAAAAAAAGAGATTGGCCA+GGG - chr8.4:31494731-31494750 MS.gene23846:intron 35.0%
! TTCAAAAAAAGAGATTGGCC+AGG - chr8.4:31494730-31494749 MS.gene23846:intron 35.0%
! TTTTCGATCGTTCAGGATAT+TGG + chr8.4:31495990-31496009 None:intergenic 35.0%
!! AGTTTTAGTAGTAGAGGTGA+TGG + chr8.4:31495014-31495033 None:intergenic 35.0%
!! CTCATCAGTTTTAGTAGTAG+AGG + chr8.4:31495020-31495039 None:intergenic 35.0%
!! GGTGTTGATGGAGAAATAAT+TGG - chr8.4:31494695-31494714 MS.gene23846:CDS 35.0%
!! TTCAAGTTGAAGCCAAAACT+GGG - chr8.4:31494000-31494019 MS.gene23846:intron 35.0%
!! TTTATTGGTCTGCTGATTTC+AGG - chr8.4:31496301-31496320 MS.gene23846:CDS 35.0%
!! TTTCAAGTTGAAGCCAAAAC+TGG - chr8.4:31493999-31494018 MS.gene23846:intron 35.0%
!! TTTTGTTGTAGAAAAGGCGT+AGG + chr8.4:31494452-31494471 None:intergenic 35.0%
!!! GTCATTCATTGTGGTTTTAG+AGG - chr8.4:31496097-31496116 MS.gene23846:CDS 35.0%
!!! TGATGGGACCATTTATTTTG+TGG - chr8.4:31493492-31493511 MS.gene23846:CDS 35.0%
AATTAGCTCCGTCTTGTCAA+TGG + chr8.4:31497051-31497070 None:intergenic 40.0%
ACTGTTATCTCGTGGTAAAG+GGG - chr8.4:31494612-31494631 MS.gene23846:CDS 40.0%
ACTTGACACCATTGACAAGA+CGG - chr8.4:31497040-31497059 MS.gene23846:CDS 40.0%
AGTATCCTAGTTTATCTCCC+AGG - chr8.4:31496610-31496629 MS.gene23846:CDS 40.0%
AGTCTTGAAAAAGCGAGAAG+AGG + chr8.4:31493243-31493262 None:intergenic 40.0%
AGTTCACATGGTGCTTATCA+TGG - chr8.4:31494320-31494339 MS.gene23846:intron 40.0%
ATCCAATGATGACCCAATTG+AGG - chr8.4:31497133-31497152 MS.gene23846:intron 40.0%
ATGGTCCCATGAGGATATTA+TGG - chr8.4:31493527-31493546 MS.gene23846:CDS 40.0%
ATTTGCCGATCTCACTTAGT+AGG - chr8.4:31496694-31496713 MS.gene23846:intron 40.0%
CAAATCCTACTGTACAGGTT+GGG - chr8.4:31495838-31495857 MS.gene23846:CDS 40.0%
CGATCTCACTTAGTAGGATA+AGG - chr8.4:31496700-31496719 MS.gene23846:intron 40.0%
CGCCGCTGATCAATATTTAT+AGG - chr8.4:31494081-31494100 MS.gene23846:intron 40.0%
CTAATAAGATCCTCAGCTTC+CGG + chr8.4:31496037-31496056 None:intergenic 40.0%
CTAATCCTGGGAGATAAACT+AGG + chr8.4:31496618-31496637 None:intergenic 40.0%
CTACTGTTATCTCGTGGTAA+AGG - chr8.4:31494610-31494629 MS.gene23846:CDS 40.0%
GATGATCATCTCCAAATGGA+TGG + chr8.4:31495955-31495974 None:intergenic 40.0%
GATGTTCCTTGACCACAATT+GGG + chr8.4:31497079-31497098 None:intergenic 40.0%
GCTGCAGACATATTCAGTTT+AGG - chr8.4:31495896-31495915 MS.gene23846:CDS 40.0%
GGGAGATAAACTAGGATACT+AGG + chr8.4:31496610-31496629 None:intergenic 40.0%
TAAACCCTGACCAGAATCTA+AGG - chr8.4:31496065-31496084 MS.gene23846:CDS 40.0%
TGATGTTCCTTGACCACAAT+TGG + chr8.4:31497080-31497099 None:intergenic 40.0%
TGCTTCTTTAGACATGGGTA+AGG + chr8.4:31494248-31494267 None:intergenic 40.0%
TTCACTCTACTGTTATCTCG+TGG - chr8.4:31494604-31494623 MS.gene23846:CDS 40.0%
TTCCTTAGTGGAGTTCATTC+CGG - chr8.4:31496015-31496034 MS.gene23846:CDS 40.0%
! AAACTCTCTTCTGGGAATTC+CGG + chr8.4:31497013-31497032 None:intergenic 40.0%
! AGGAAGAATGGAAGGTATGA+TGG - chr8.4:31494755-31494774 MS.gene23846:intron 40.0%
! ATTTGGTTCAAGTGGAGTCA+GGG - chr8.4:31494948-31494967 MS.gene23846:intron 40.0%
! CCATGCCATTTGACAATGTT+CGG + chr8.4:31494866-31494885 None:intergenic 40.0%
! GCTAATTGATGACCCAATTG+TGG - chr8.4:31497064-31497083 MS.gene23846:CDS 40.0%
! GGATGATTGGTCATTGTACA+AGG - chr8.4:31493621-31493640 MS.gene23846:intron 40.0%
! TGAATCATCATATCTGAGGC+AGG + chr8.4:31494371-31494390 None:intergenic 40.0%
! TGATTGGTCATTGTACAAGG+AGG - chr8.4:31493624-31493643 MS.gene23846:intron 40.0%
! TTCTGGGAATTCCGGAAAAA+AGG + chr8.4:31497005-31497024 None:intergenic 40.0%
! TTTTGGACTGTGAGGATGAT+TGG - chr8.4:31493608-31493627 MS.gene23846:intron 40.0%
!! AACATACTAGGTGATGGAGT+TGG + chr8.4:31494563-31494582 None:intergenic 40.0%
!! TAGCGAATTTTTGGACTGTG+AGG - chr8.4:31493600-31493619 MS.gene23846:intron 40.0%
!!! TGTTGCAGCATCCTTTTTTC+CGG - chr8.4:31496991-31497010 MS.gene23846:CDS 40.0%
AAGTACAACGCTCCATTGCA+AGG + chr8.4:31494916-31494935 None:intergenic 45.0%
AATTCCTTGATGCTGCTCTG+GGG + chr8.4:31495867-31495886 None:intergenic 45.0%
ACTAAGGGAAGCCATCCATT+TGG - chr8.4:31495941-31495960 MS.gene23846:CDS 45.0%
AGGAAGAGGAACAGAAACCA+GGG + chr8.4:31493223-31493242 None:intergenic 45.0%
AGTGCTTACCAGGAACATGT+TGG + chr8.4:31495466-31495485 None:intergenic 45.0%
ATAAATGGTCCCATCAGGTG+CGG + chr8.4:31493488-31493507 None:intergenic 45.0%
ATGAAGCACGGATATGGACA+CGG + chr8.4:31495352-31495371 None:intergenic 45.0%
CAATTCCTTGATGCTGCTCT+GGG + chr8.4:31495868-31495887 None:intergenic 45.0%
CATTGTCAAATGGCATGGAG+TGG - chr8.4:31494868-31494887 MS.gene23846:intron 45.0%
CCAAATCCTACTGTACAGGT+TGG - chr8.4:31495837-31495856 MS.gene23846:CDS 45.0%
CCAACCTGTACAGTAGGATT+TGG + chr8.4:31495840-31495859 None:intergenic 45.0%
CCGAACATTGTCAAATGGCA+TGG - chr8.4:31494863-31494882 MS.gene23846:intron 45.0%
GAAAAAGCGAGAAGAGGAAG+AGG + chr8.4:31493237-31493256 None:intergenic 45.0%
GCTTGATACGAGCTGTAGAT+TGG + chr8.4:31493571-31493590 None:intergenic 45.0%
GGATAAGTACTACGGCAAAC+TGG - chr8.4:31493645-31493664 MS.gene23846:intron 45.0%
GGCATTAACCAACATGTTCC+TGG - chr8.4:31495455-31495474 MS.gene23846:intron 45.0%
GGCTTCAACTTGAAACGAAG+TGG + chr8.4:31493994-31494013 None:intergenic 45.0%
GTCCAAAAATTCGCTAGCTC+CGG + chr8.4:31493596-31493615 None:intergenic 45.0%
GTCCTCAATTGGGTCATCAT+TGG + chr8.4:31497138-31497157 None:intergenic 45.0%
TCAATTCCTTGATGCTGCTC+TGG + chr8.4:31495869-31495888 None:intergenic 45.0%
TCCAAAAATTCGCTAGCTCC+GGG + chr8.4:31493595-31493614 None:intergenic 45.0%
TCCATATCCGTGCTTCATCT+AGG - chr8.4:31495354-31495373 MS.gene23846:intron 45.0%
TCCTAGATGAAGCACGGATA+TGG + chr8.4:31495358-31495377 None:intergenic 45.0%
TGATGACCCAATTGTGGTCA+AGG - chr8.4:31497070-31497089 MS.gene23846:CDS 45.0%
TGGGACCATCATACTTCAGA+TGG + chr8.4:31494115-31494134 None:intergenic 45.0%
TTCCGGAATGAACTCCACTA+AGG + chr8.4:31496020-31496039 None:intergenic 45.0%
TTCGCCAAATCCTACTGTAC+AGG - chr8.4:31495833-31495852 MS.gene23846:CDS 45.0%
TTTGTGGCCATCTACGAGAA+TGG - chr8.4:31493508-31493527 MS.gene23846:CDS 45.0%
! AAAAAGAGATTGGCCAGGGA+AGG - chr8.4:31494735-31494754 MS.gene23846:intron 45.0%
! AATTAGTTGTGTCGGCGAGT+CGG - chr8.4:31495305-31495324 MS.gene23846:intron 45.0%
! GATTTGGTTCAAGTGGAGTC+AGG - chr8.4:31494947-31494966 MS.gene23846:intron 45.0%
! TGTTGTAGAAAAGGCGTAGG+AGG + chr8.4:31494449-31494468 None:intergenic 45.0%
!! AACTTAGGGGGTATTGTTGC+AGG - chr8.4:31495138-31495157 MS.gene23846:CDS 45.0%
!! ACTTAGGGGGTATTGTTGCA+GGG - chr8.4:31495139-31495158 MS.gene23846:CDS 45.0%
!! TATATGTGTCGGTGTCGTGT+CGG + chr8.4:31495255-31495274 None:intergenic 45.0%
!! TGTACTGATCGACCCAGTTT+TGG + chr8.4:31494015-31494034 None:intergenic 45.0%
!!! ATTTTATTTTATTTTTTTTG+AGG - chr8.4:31493836-31493855 MS.gene23846:intron 5.0%
AAACTGTTTGCCGCACCTGA+TGG - chr8.4:31493475-31493494 MS.gene23846:CDS 50.0%
AACTGTTTGCCGCACCTGAT+GGG - chr8.4:31493476-31493495 MS.gene23846:CDS 50.0%
AAGTATGATGGTCCCACGTC+GGG - chr8.4:31494119-31494138 MS.gene23846:intron 50.0%
ACCTGATCAGGTACAAGAGC+AGG - chr8.4:31497178-31497197 MS.gene23846:intron 50.0%
ACCTGCTCTTGTACCTGATC+AGG + chr8.4:31497182-31497201 None:intergenic 50.0%
ACCTTCCATTCTTCCTTCCC+TGG + chr8.4:31494751-31494770 None:intergenic 50.0%
ACGTGTTGCGTGTCCTCAAT+TGG + chr8.4:31497149-31497168 None:intergenic 50.0%
AGAGTTGTTAGAACGGACGG+AGG + chr8.4:31493292-31493311 None:intergenic 50.0%
ATTGGCCAGGGAAGGAAGAA+TGG - chr8.4:31494743-31494762 MS.gene23846:intron 50.0%
CAAAATCCTGATCCCGACGT+GGG + chr8.4:31494134-31494153 None:intergenic 50.0%
CATGGGACCATTCTCGTAGA+TGG + chr8.4:31493518-31493537 None:intergenic 50.0%
CGTGTTGCGTGTCCTCAATT+GGG + chr8.4:31497148-31497167 None:intergenic 50.0%
CGTTGAGGTTTCACCTGATC+AGG - chr8.4:31497166-31497185 MS.gene23846:intron 50.0%
GAAGTATGATGGTCCCACGT+CGG - chr8.4:31494118-31494137 MS.gene23846:intron 50.0%
GAGGAAGAGGAACAGAAACC+AGG + chr8.4:31493224-31493243 None:intergenic 50.0%
GGAAGAGGAACAGAAACCAG+GGG + chr8.4:31493222-31493241 None:intergenic 50.0%
GTCAACCAGTTGCAGTCAAG+CGG - chr8.4:31494777-31494796 MS.gene23846:intron 50.0%
TACAGCTCGTATCAAGCTCC+CGG - chr8.4:31493574-31493593 MS.gene23846:intron 50.0%
TATGAAGCACGGACACTCCT+TGG - chr8.4:31495188-31495207 MS.gene23846:CDS 50.0%
TCTACGAGAATGGTCCCATG+AGG - chr8.4:31493518-31493537 MS.gene23846:CDS 50.0%
TGCAACACTTCAACCGCGTT+CGG + chr8.4:31496978-31496997 None:intergenic 50.0%
! CTTTATTTCCAGGCCGAACG+CGG - chr8.4:31496962-31496981 MS.gene23846:CDS 50.0%
! TCCCGGAGCTAGCGAATTTT+TGG - chr8.4:31493591-31493610 MS.gene23846:intron 50.0%
!! CTTAGGGGGTATTGTTGCAG+GGG - chr8.4:31495140-31495159 MS.gene23846:CDS 50.0%
!! GGTGCGGCAAACAGTTTTGT+TGG + chr8.4:31493472-31493491 None:intergenic 50.0%
ACACGACACGTGTCTGACAC+GGG + chr8.4:31495226-31495245 None:intergenic 55.0%
ACGGATATGGACACGGACAC+CGG + chr8.4:31495345-31495364 None:intergenic 55.0%
AGAAGCCGCTTGACTGCAAC+TGG + chr8.4:31494785-31494804 None:intergenic 55.0%
CCAAAATCCTGATCCCGACG+TGG + chr8.4:31494135-31494154 None:intergenic 55.0%
CGCGTTCGGCCTGGAAATAA+AGG + chr8.4:31496964-31496983 None:intergenic 55.0%
GACACGACACGTGTCTGACA+CGG + chr8.4:31495227-31495246 None:intergenic 55.0%
GCACGGACACTCCTTGGATA+AGG - chr8.4:31495194-31495213 MS.gene23846:CDS 55.0%
GCCAGGGAAGGAAGAATGGA+AGG - chr8.4:31494747-31494766 MS.gene23846:intron 55.0%
GCTGTAGATTGGCGATCCTG+TGG + chr8.4:31493560-31493579 None:intergenic 55.0%
GGAGTTCATTCCGGAAGCTG+AGG - chr8.4:31496024-31496043 MS.gene23846:CDS 55.0%
GGCTTCCCAACCTGTACAGT+AGG + chr8.4:31495846-31495865 None:intergenic 55.0%
GGTTCAAGTGGAGTCAGGGA+AGG - chr8.4:31494952-31494971 MS.gene23846:intron 55.0%
GTTGTTAGAACGGACGGAGG+AGG + chr8.4:31493289-31493308 None:intergenic 55.0%
TGAGGACACGCAACACGTTG+AGG - chr8.4:31497151-31497170 MS.gene23846:intron 55.0%
! CCACGTCGGGATCAGGATTT+TGG - chr8.4:31494132-31494151 MS.gene23846:intron 55.0%
ACGGGGACACGCCTTATCCA+AGG + chr8.4:31495208-31495227 None:intergenic 60.0%
CACGACACGTGTCTGACACG+GGG + chr8.4:31495225-31495244 None:intergenic 60.0%
GAAGCCCCAGAGCAGCATCA+AGG - chr8.4:31495860-31495879 MS.gene23846:CDS 60.0%
GTTAGAACGGACGGAGGAGG+AGG + chr8.4:31493286-31493305 None:intergenic 60.0%
!! TGTCGGTGTCGTGTCGGTGT+CGG + chr8.4:31495249-31495268 None:intergenic 60.0%
ACGGAGGAGGAGGAGGAGCA+TGG + chr8.4:31493276-31493295 None:intergenic 65.0%
AGAACGGACGGAGGAGGAGG+AGG + chr8.4:31493283-31493302 None:intergenic 65.0%
CACGGACACCGGACACGACA+CGG + chr8.4:31495334-31495353 None:intergenic 65.0%
CACTTCAACCGCGTTCGGCC+TGG + chr8.4:31496973-31496992 None:intergenic 65.0%
GATGGTCCCACGTCGGGATC+AGG - chr8.4:31494125-31494144 MS.gene23846:intron 65.0%
! GTCGGTGTCCGTGTCGTGTC+CGG - chr8.4:31495323-31495342 MS.gene23846:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 31493208 31497346 31493208 ID=MS.gene23846
chr8.4 mRNA 31493208 31497346 31493208 ID=MS.gene23846.t1;Parent=MS.gene23846
chr8.4 exon 31497330 31497346 31497330 ID=MS.gene23846.t1.exon1;Parent=MS.gene23846.t1
chr8.4 CDS 31497330 31497346 31497330 ID=cds.MS.gene23846.t1;Parent=MS.gene23846.t1
chr8.4 exon 31496888 31497107 31496888 ID=MS.gene23846.t1.exon2;Parent=MS.gene23846.t1
chr8.4 CDS 31496888 31497107 31496888 ID=cds.MS.gene23846.t1;Parent=MS.gene23846.t1
chr8.4 exon 31495596 31496651 31495596 ID=MS.gene23846.t1.exon3;Parent=MS.gene23846.t1
chr8.4 CDS 31495596 31496651 31495596 ID=cds.MS.gene23846.t1;Parent=MS.gene23846.t1
chr8.4 exon 31495078 31495243 31495078 ID=MS.gene23846.t1.exon4;Parent=MS.gene23846.t1
chr8.4 CDS 31495078 31495243 31495078 ID=cds.MS.gene23846.t1;Parent=MS.gene23846.t1
chr8.4 exon 31494468 31494732 31494468 ID=MS.gene23846.t1.exon5;Parent=MS.gene23846.t1
chr8.4 CDS 31494468 31494732 31494468 ID=cds.MS.gene23846.t1;Parent=MS.gene23846.t1
chr8.4 exon 31493208 31493580 31493208 ID=MS.gene23846.t1.exon6;Parent=MS.gene23846.t1
chr8.4 CDS 31493208 31493580 31493208 ID=cds.MS.gene23846.t1;Parent=MS.gene23846.t1
Gene Sequence

>MS.gene23846

ATGAAAGTTCTCCCCTGGTTTCTGTTCCTCTTCCTCTTCTCGCTTTTTCAAGACTGTTGCTGCGACCATGCTCCTCCTCCTCCTCCGTCCGTTCTAACAACTCTTTTTCTTTCTTTTCTTTATCGATAATATATGCTAGGCTTGTTTGATTTGTACATGATATCTTATTATACAATTATTTTTTACTATTTTGATGTTGATATTCTCGTACTTATTTGTGCAAATGTTTTCATTGACAGTAATGAAGCAACAAAACTAATTCCAACAAAACTGTTTGCCGCACCTGATGGGACCATTTATTTTGTGGCCATCTACGAGAATGGTCCCATGAGGATATTATGGTCATTCTCCACAGGATCGCCAATCTACAGCTCGTATCAAGCTCCCGGAGCTAGCGAATTTTTGGACTGTGAGGATGATTGGTCATTGTACAAGGAGGATAAGTACTACGGCAAACTGGTATATGTTAGAACATTGTAATTGTAATTGGTATTTGAAATATGCGTTTTGCAGCATCAGCTTAACCTACATTAGCTAGAGAGTTAAATTTCACTACTGTGTCTGTAACTAACTAAATACAAAGAATATTTGAAGTAGAAAACTAATCTATTCTTACACTGTTTATTCAATTTTATTTTATTTTTTTTGAGGAAATTTGGGATTGATGTTCTGTTGGTTGTTTATCATGTCTACAGATAATAGTGGAATCTATTAGAGAACTTGCACATCGTACGCCTATCATAATTTCATATAATGGAGAAGCTGTAATTGGATCCGAAAAAACCACTTCGTTTCAAGTTGAAGCCAAAACTGGGTCGATCAGTACAAATAATAAGAATTTTGCTGGTCCTGGGAATCTAAATGCATCAAAGCCGCCGCTGATCAATATTTATAGGAAGGATTTCCATCTGAAGTATGATGGTCCCACGTCGGGATCAGGATTTTGGAATTTGACAGTAGCCGAGTTTGATTTTGTATTATTATGCCATCATCAGATTCATACTACATTTCATGTAGAGGATCTCAATTTTACAATGCCTTACCCATGTCTAAAGAAGCAAAAAGTGTTCAAACTGAATAAGAACTTTCTGTTAGAATCTTTAATCAGTGAAAGTTCACATGGTGCTTATCATGGAAATGATACACTCTCAAATTCAATGCCTGCCTCAGATATGATGATTCAGTTGCAGCCTGATTTCGATAGATTTTTCAATGATCATGATGGTAATATGGCAATGCCTCCTACGCCTTTTCTACAACAAAATAATTACAAGAGGAAAGATAAACTTCGTCAGCCTCTCACTGAGAGTGATTTAATAGGACATGTTTATTTGAACAAGAAGAGTGGATGGCCAACTCCATCACCTAGTATGTTCGTTATTCTGTTGGTCGTCGTTTCACTCTACTGTTATCTCGTGGTAAAGGGGATTAAGTATAAGTATATACCAAAGGATAATAATAGAGAAGTATCGATGAACTTTAATGAAGGTGTTGATGGAGAAATAATTGGCGAATTATTCGTTTCAAAAAAAGAGATTGGCCAGGGAAGGAAGAATGGAAGGTATGATGGTCAACCAGTTGCAGTCAAGCGGCTTCTCAAATCTCATCATAGTCTAGCTCTAAACGAAATCAGAACACTTATGTCGGACCATCATCCGAACATTGTCAAATGGCATGGAGTGGAGTACGATGAAGATTTTATTTACCTTGCAATGGAGCGTTGTACTTGTAACTTAAATGATTTGGTTCAAGTGGAGTCAGGGAAGGATACTACAGAATATCTTTGGAAAAAAAATTGACTATCCATCACCTCTACTACTAAAACTGATGAGGTTTGCATTATTTCTTCTTGAACCCTTACTTGTGCACATTGTAAGTGTAGTTTATTTTACACATTTTTAGTATAAACTAACTTCCATTTTTGTTTTGCAACTTAGGGGGTATTGTTGCAGGGGTTGTTCATTTGCATAAACTAGGAACTATGAAGCACGGACACTCCTTGGATAAGGCGTGTCCCCGTGTCAGACACGTGTCGTGTCCGACACCGACACGACACCGACACATATAATTACACTGCATTTTGTGATTTTCTAAAAAAATTAGTTGTGTCGGCGAGTCGGTGTCCGTGTCGTGTCCGGTGTCCGTGTCCATATCCGTGCTTCATCTAGGAATAATGCATGGAAATTTGAAACCTCAAATGTTCTAATAATCAAGGATAGATCCTTATGTGTAAAGCTTTCTGACATGGGCATTAACCAACATGTTCCTGGTAAGCACTAAGATTTTTAAAAAAAATTTACATTTCCTAACATTTACCTTGTGAATGTCCAATTATGTCTAGCATGAGATTTGCTTCTGTAAATTACAATATGGTGATTTGTTAGATATCTCTTAATATCTTCAAAGTACTTTAATTGTCTCATAAGAGTTGTTTCCTAATTTTTGTTTTATTTTCAAAAAAATTCTATATCAATTAGCTCTTGGGAATTGTTTCCTAATTGTTTTCTTTTCAAATTTGTTTCCATATCGATCGAATCTAATGTTATTCGGATTTGTTTCTCTTCTTTCTCTTTCCAAATTCATTGACCTTTTTCTCTTTATATTGTTTAAACAGGGAAGTCTGTTTTCGCCAAATCCTACTGTACAGGTTGGGAAGCCCCAGAGCAGCATCAAGGAATTGAAACACAAGCTGCAGACATATTCAGTTTAGGTTGTATTCTTTTTTTCTGTTTGACTAAGGGAAGCCATCCATTTGGAGATGATCATCTTTGGCGTGAGTCCAATATCCTGAACGATCGAAAAGATCTTTCCTTAGTGGAGTTCATTCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCCTGACCAGAATCTAAGGTAAATCATTGTCATTCATTGTGGTTTTAGAGGTATATCTTCTCATACTTTCACAGTGTTGCATCTGCTATGACTTGCTTAAATGTTATGTTGTATCAAATGATTAAGGCTCAAAGTTAATACCAACATACCTATTAATGTTATGAATAATAATTTAAGATGTAAGAGTGTTACCCTATTTTGATAACATTAATCTATTGTAGTTTTATTTGTTTTTATTGGTCTGCTGATTTCAGGTCTTATTTTAAGCCAAGACTAAGATTTATTAAGATAGGTTAAACTGAAATTATGCTATTTCATTATAATTTCAGTCTCTAGCTTGCTATTGCGTATTTCTTTCTGGTTTGTTATTTCAGTCTCTATTGTAGTGTTATTTTGCTTCTTTGGTTGTTACTTGTTATATATTATCTTTTGAAGGGAATATTTATAAAAAGTTTAAAGTTCGGTAAGCTTTAGAGTTTAGATTGAAGGATAATGTTAGAATATAAAAAAAAATGTTATAATATCTTCGATATTATGTCCTAGTATCCTAGTTTATCTCCCAGGATTAGTTTATAATCGTGTAGCGTCTTTTAGACCCAAAAATTAGTTATTATATTGCATGGTTATTTGCCGATCTCACTTAGTAGGATAAGGTTTGATTGTTGTATTACACAGTTATTATCATGATTTGTTTCTTGATTTCCCTATTTATTTAGGAGTAGAAGCAGGAGCTTTGTATTTATATAAATAAGAGTTTGTGTTTAGTCTTTTGTATCAAATTGGTAGAAAGTAAATCAATCATATTACGTTATTATCATATTCTAAGCCTTTATTATTTCTCTTCTTTTTTCTAAATCTCAATATAACTTCAACAATCATAAAGAGATTATTTCCTTTATTTCCAGGCCGAACGCGGTTGAAGTGTTGCAGCATCCTTTTTTCCGGAATTCCCAGAAGAGAGTTTCATTTTTACTTGACACCATTGACAAGACGGAGCTAATTGATGACCCAATTGTGGTCAAGGAACATCAGATTGTTGAAAAGGAAAATATTAGGGTTGAGGAATCCAATGATGACCCAATTGAGGACACGCAACACGTTGAGGTTTCACCTGATCAGGTACAAGAGCAGGTTCTAAACTCTCCTTTAACTCATGATATGCAGAACAATGAGGCAAAAGTGCCTTTTACACCATACTTGACAAAGAAACAAAAGAAACAACTCAAAAGAGCATACAAAACTCATTCTAAGGGTGAACCATCTCCAACGCTGAAATGA
Protein sequence

>MS.gene23846.t1

MKVLPCNEATKLIPTKLFAAPDGTIYFVAIYENGPMRILWSFSTGSPIYSSYQAPGASEFLDCEDDWSLYKEDKYYGKLIIVESIRELAHRTPIIISYNGEAVIGSEKTTSFQVEAKTGSISTNNKNFAGPGNLNASKPPLINIYRKDFHLKYDGPTSGSGFWNLTVAEFDFVLLCHHQIHTTFHVEDLNFTMPYPCLKKQKVFKLNKNFLLESLISESSHGAYHGNDTLSNSMPASDMMIQLQPDFDRFFNDHDGNMAMPPTPFLQQNNYKRKDKLRQPLTESDLIGHVYLNKKSGWPTPSPSMFVILLVVVSLYCYLVVKGIKYKYIPKDNNREVSMNFNEGVDGEIIGELFVSKKEIGQGRKNGRYDGQPVAVKRLLKSHHSLALNEIRTLMSDHHPNIVKWHGVEYDEDFIYLAMERCTCNLNDLVQLCRRVGVRVVSGVRVHIRASSRNNAWKFETSNVLIIKDRSLCVKLSDMGINQHVPGKSVFAKSYCTGWEAPEQHQGIETQAADIFSLGCILFFCLTKGSHPFGDDHLWRESNILNDRKDLSLVEFIPEAEDLISCLLNPDQNLRPNAVEVLQHPFFRNSQKRVSFLLDTIDKTELIDDPIVVKEHQIVEKENIRVEESNDDPIEDTQHVEVSPDQVQEQVLNSPLTHDMQNNEAKVPFTPYLTKKQKKQLKRAYKTHSKGEPSPTLK