AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24194

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24194.t1 MTR_1g023690 97.477 555 12 1 1 553 1 555 0.0 1105
MS.gene24194.t1 MTR_4g072090 49.174 484 180 18 42 504 41 479 1.62e-110 339
MS.gene24194.t1 MTR_4g072090 48.889 450 162 19 42 469 41 444 4.88e-97 302
MS.gene24194.t1 MTR_6g034945 47.964 221 94 8 301 513 74 281 4.28e-44 159
MS.gene24194.t1 MTR_2g099050 60.000 140 53 2 340 477 175 313 3.57e-41 154
MS.gene24194.t1 MTR_3g094020 54.777 157 67 2 368 521 91 246 2.98e-40 148
MS.gene24194.t1 MTR_5g075390 56.944 144 52 2 340 483 124 257 2.99e-39 147
MS.gene24194.t1 MTR_3g467120 52.486 181 78 4 340 518 138 312 5.03e-39 147
MS.gene24194.t1 MTR_2g090900 51.020 98 44 2 384 479 190 285 2.84e-18 86.7
MS.gene24194.t1 MTR_4g079500 50.000 98 45 2 384 479 193 288 3.23e-18 86.3
MS.gene24194.t1 MTR_2g090900 51.020 98 44 2 384 479 190 285 3.34e-18 86.7
MS.gene24194.t1 MTR_0405s0060 65.517 58 20 0 359 416 98 155 8.98e-16 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24194.t1 AT4G38900 45.028 533 199 25 19 505 27 511 3.14e-101 317
MS.gene24194.t1 AT4G38900 45.028 533 199 25 19 505 27 511 3.14e-101 317
MS.gene24194.t1 AT4G38900 44.527 539 199 26 19 505 27 517 2.38e-98 309
MS.gene24194.t1 AT2G21230 41.649 461 207 15 79 510 74 501 3.67e-81 263
MS.gene24194.t1 AT2G21230 41.649 461 207 15 79 510 74 501 3.67e-81 263
MS.gene24194.t1 AT2G21230 40.899 467 208 16 79 510 74 507 6.02e-78 255
MS.gene24194.t1 AT2G21230 42.195 410 181 14 79 465 74 450 2.04e-73 241
MS.gene24194.t1 AT1G43700 47.549 204 87 6 300 483 89 292 2.76e-42 155
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 6.92e-41 152
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.75e-40 151
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.75e-40 151
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.75e-40 151
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.75e-40 151
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.75e-40 151
MS.gene24194.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.75e-40 151
MS.gene24194.t1 AT2G40620 49.505 202 77 4 337 525 112 301 1.99e-40 150
MS.gene24194.t1 AT1G06070 56.494 154 56 3 334 477 150 302 7.26e-40 150
MS.gene24194.t1 AT1G06850 51.634 153 72 1 356 506 117 269 4.46e-38 143
MS.gene24194.t1 AT2G13150 36.788 193 111 5 298 488 71 254 9.82e-29 115
MS.gene24194.t1 AT2G12940 35.676 185 110 4 296 480 68 243 5.05e-28 114
MS.gene24194.t1 AT2G12900 38.760 129 71 1 357 477 80 208 4.12e-23 99.4
MS.gene24194.t1 AT1G06850 60.241 83 31 1 356 436 117 199 1.57e-21 94.0
MS.gene24194.t1 AT3G58120 51.546 97 43 2 385 479 202 296 7.81e-19 88.2
MS.gene24194.t1 AT2G42380 50.515 97 44 2 385 479 186 280 3.59e-18 86.3
MS.gene24194.t1 AT2G42380 51.190 84 37 2 385 466 186 267 9.96e-16 78.2
MS.gene24194.t1 AT3G58120 52.439 82 35 2 385 464 202 281 2.27e-15 77.4
MS.gene24194.t1 AT2G21235 32.995 197 90 5 382 542 356 546 4.97e-15 78.6
MS.gene24194.t1 AT2G42380 46.392 97 37 3 385 479 186 269 1.56e-12 68.9
MS.gene24194.t1 AT1G58110 43.158 95 49 1 383 477 232 321 7.52e-11 64.7
MS.gene24194.t1 AT1G58110 43.158 95 49 1 383 477 232 321 7.52e-11 64.7

Find 157 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAACTCCATGCTGATTTC+TGG 0.095023 1.2:+1409294 None:intergenic
TGAATTCTCTTCTAGGATTT+TGG 0.159961 1.2:-1409084 MS.gene24194:intron
TTAGGTGATAAACTGGTATT+AGG 0.185148 1.2:+1410185 None:intergenic
ATTTGATTAATTTGATTAAT+AGG 0.196865 1.2:+1410266 None:intergenic
GTTTAGTGCTTACATGAATT+TGG 0.199161 1.2:-1409646 MS.gene24194:CDS
GATCGTCGGAATTTGGTTTC+TGG 0.214069 1.2:-1409795 MS.gene24194:CDS
ATGGAGGATGGCTTGGGTTT+TGG 0.216775 1.2:-1409984 MS.gene24194:CDS
GAGATTGTGGAGGCATAAAT+TGG 0.250520 1.2:+1410144 None:intergenic
TCTAGCAGTGATTCACCTTT+AGG 0.253275 1.2:-1409879 MS.gene24194:CDS
GGCATAGGATTCAATTGAAT+TGG 0.265815 1.2:+1410287 None:intergenic
GATGATACGCACCTGTAATT+TGG 0.269495 1.2:+1408947 None:intergenic
CCTGAAAATCACAAAAGTTC+TGG 0.271067 1.2:-1410236 MS.gene24194:CDS
GTCTGCCCTCTCAGGTCTTA+TGG 0.290824 1.2:-1407677 MS.gene24194:CDS
AATCACAAAAGTTCTGGTTT+TGG 0.303027 1.2:-1410230 MS.gene24194:CDS
TGTCAGTGATCGTCGGAATT+TGG 0.310184 1.2:-1409802 MS.gene24194:CDS
TTGGCTGCTGATGCTGCGCC+TGG 0.311111 1.2:+1407623 None:intergenic
GATGAAATACATTTCTGAAT+TGG 0.329479 1.2:-1409024 MS.gene24194:CDS
GACTGTGTTGATGGGTTTAG+AGG 0.332730 1.2:-1409720 MS.gene24194:CDS
TACTCAGTTTACCAAATTAC+AGG 0.335238 1.2:-1408958 MS.gene24194:intron
CTAGCAGTGATTCACCTTTA+GGG 0.343365 1.2:-1409878 MS.gene24194:CDS
GATAAACTGGTATTAGGGTT+AGG 0.348576 1.2:+1410191 None:intergenic
TATTAATCAAATTAATCAAA+TGG 0.352253 1.2:-1410264 MS.gene24194:CDS
CCAGAAATCAGCATGGAGTT+TGG 0.352422 1.2:-1409294 MS.gene24194:CDS
CAAATTGAGGCTTCAATCCT+TGG 0.361103 1.2:-1408770 MS.gene24194:CDS
TTCGAACCCGATTCCGAAAA+GGG 0.372318 1.2:+1410017 None:intergenic
GCATAGGATTCAATTGAATT+GGG 0.375101 1.2:+1410288 None:intergenic
TAGTTTCTGTCTGAAGAGTT+TGG 0.377481 1.2:+1408991 None:intergenic
GGGTTCGAAAGATGTTTCTA+TGG 0.378171 1.2:-1410003 MS.gene24194:CDS
GTTTCTATGGAGGATGGCTT+GGG 0.385643 1.2:-1409990 MS.gene24194:CDS
TGATGGTTTAGGTGATAAAC+TGG 0.388036 1.2:+1410178 None:intergenic
CACAATCTCAAACTCATTCC+AGG 0.390554 1.2:-1410130 MS.gene24194:CDS
AAGGATAGGGACTGTGTTGA+TGG 0.391348 1.2:-1409729 MS.gene24194:CDS
TGGAAATTTCTAAGCTGGTT+TGG 0.392467 1.2:+1407604 None:intergenic
GGATAAGGAGATGATGGTTT+AGG 0.394908 1.2:+1410167 None:intergenic
TGATTCACCTTTAGGGATAT+CGG 0.396807 1.2:-1409871 MS.gene24194:CDS
GCCGATTCAGTTGGTGTTGA+AGG 0.397394 1.2:-1409748 MS.gene24194:CDS
GGGTTTGAACTTACATGATA+AGG 0.398012 1.2:+1410038 None:intergenic
CGTGTAAATGTGAAAGGAAT+AGG 0.399807 1.2:-1409531 MS.gene24194:CDS
TTCTTACCTCTTTGCACGCT+TGG 0.401343 1.2:+1409194 None:intergenic
ACAGGAGATGAAGAAAATAA+TGG 0.405735 1.2:-1409253 MS.gene24194:CDS
TCTTACCTCTTTGCACGCTT+GGG 0.408680 1.2:+1409195 None:intergenic
GGTTTGAACTTACATGATAA+GGG 0.413641 1.2:+1410039 None:intergenic
AGATTGTGGAGGCATAAATT+GGG 0.419988 1.2:+1410145 None:intergenic
TATTAACCAACAAATGTTCC+AGG 0.420194 1.2:-1407641 MS.gene24194:CDS
AGAGAATGATGGAGCTGAAA+TGG 0.422683 1.2:-1409676 MS.gene24194:CDS
ATTAATCAAATTAATCAAAT+GGG 0.434941 1.2:-1410263 MS.gene24194:CDS
TTTCGAACCCGATTCCGAAA+AGG 0.436816 1.2:+1410016 None:intergenic
ATTGTCTTCCGCCTCGTAAA+GGG 0.438192 1.2:-1409911 MS.gene24194:CDS
CATAAGCTTCCTCCTTTACA+AGG 0.439342 1.2:-1409366 MS.gene24194:CDS
TGCCATTCTGATGCTTCGAT+TGG 0.443341 1.2:+1407509 None:intergenic
TTTAGAGGAGAGAGTTTCGA+TGG 0.447218 1.2:-1409705 MS.gene24194:CDS
GCTGCGCCTGGAACATTTGT+TGG 0.447847 1.2:+1407635 None:intergenic
GAGGAGAGAGTTTCGATGGG+AGG 0.451918 1.2:-1409701 MS.gene24194:CDS
TGTTTCTATGGAGGATGGCT+TGG 0.451973 1.2:-1409991 MS.gene24194:CDS
AGAGGAGGGAAGGGGTCAAG+AGG 0.455292 1.2:-1409476 MS.gene24194:CDS
GGCGGAGAGTCTGCCCTCTC+AGG 0.456637 1.2:-1407685 MS.gene24194:CDS
GCCGCAAAACAGCGTCTCTC+AGG 0.456659 1.2:-1407581 MS.gene24194:CDS
TAGGTGATAAACTGGTATTA+GGG 0.460276 1.2:+1410186 None:intergenic
GGAGGCATAAATTGGGGATA+AGG 0.460553 1.2:+1410152 None:intergenic
TTCAACCGTCTTCGAACCAC+TGG 0.466140 1.2:+1409578 None:intergenic
TCCTTCAACACCAACTGAAT+CGG 0.468786 1.2:+1409747 None:intergenic
TCAGCTGGTGACGCCTCAGC+TGG 0.470371 1.2:-1409829 MS.gene24194:CDS
GCGGCTGGAAATTTCTAAGC+TGG 0.471848 1.2:+1407599 None:intergenic
CAGTTGGGACTGTTGTTCCA+AGG 0.474662 1.2:+1408753 None:intergenic
CATTGTCTTCCGCCTCGTAA+AGG 0.477811 1.2:-1409912 MS.gene24194:CDS
CTACCATCCATTGAATTGCT+AGG 0.480737 1.2:+1409324 None:intergenic
AATTGGGGATAAGGAGATGA+TGG 0.483937 1.2:+1410161 None:intergenic
ATAAACTGGTATTAGGGTTA+GGG 0.484174 1.2:+1410192 None:intergenic
TGTTAACTCTGTGCCTCAGC+TGG 0.484237 1.2:-1409844 MS.gene24194:CDS
ATCAGCATGGAGTTTGGAAA+TGG 0.484264 1.2:-1409288 MS.gene24194:CDS
TTGCTAGGCGAGTGTTGACC+AGG 0.493979 1.2:+1409339 None:intergenic
GTTCAGATGAGAGGAGGGAA+GGG 0.496537 1.2:-1409485 MS.gene24194:CDS
GGGGTCAAGAGGAGTTCTAA+TGG 0.499431 1.2:-1409465 MS.gene24194:CDS
AGACTTTGAATGGCGAAGTC+CGG 0.501336 1.2:-1407735 MS.gene24194:CDS
GAAGGGGAGGGACTCAATGG+TGG 0.501514 1.2:+1410062 None:intergenic
TTCAGTTGGTGTTGAAGGAT+AGG 0.505836 1.2:-1409743 MS.gene24194:CDS
GGGGAAGGGGAGGGACTCAA+TGG 0.509840 1.2:+1410059 None:intergenic
ATGCATACCATCTTTCAGTT+GGG 0.510205 1.2:+1408738 None:intergenic
ACATAGGAGAAGTTACTCAT+TGG 0.510819 1.2:-1409421 MS.gene24194:CDS
TTAGAGGAGAGAGTTTCGAT+GGG 0.511374 1.2:-1409704 MS.gene24194:CDS
CTGGAATGAGTTTGAGATTG+TGG 0.518906 1.2:+1410131 None:intergenic
TGTGAAAGGAATAGGTGCTA+AGG 0.524307 1.2:-1409523 MS.gene24194:CDS
CATTTCTGAATTGGAGCAGA+AGG 0.526293 1.2:-1409015 MS.gene24194:CDS
AGACACACTGTAGCAGAACT+AGG 0.526862 1.2:-1407706 MS.gene24194:CDS
GGTTAGGCGAAGGTGCATGA+TGG 0.530722 1.2:+1409958 None:intergenic
CATGCATACCATCTTTCAGT+TGG 0.532496 1.2:+1408737 None:intergenic
TCAGTTGGTGTTGAAGGATA+GGG 0.533089 1.2:-1409742 MS.gene24194:CDS
CATAGGATTCAATTGAATTG+GGG 0.534542 1.2:+1410289 None:intergenic
GTATTAGGGTTAGGGTATGA+AGG 0.535303 1.2:+1410200 None:intergenic
GTTAGGCGAAGGTGCATGAT+GGG 0.538166 1.2:+1409959 None:intergenic
AACTTACATGATAAGGGGAA+GGG 0.538780 1.2:+1410045 None:intergenic
AAAGATGTTTCTATGGAGGA+TGG 0.538942 1.2:-1409996 MS.gene24194:CDS
ACAAATTCCGATATCCCTAA+AGG 0.542260 1.2:+1409864 None:intergenic
ACACTCGCCTAGCAATTCAA+TGG 0.545737 1.2:-1409331 MS.gene24194:CDS
CGTCGGAATTTGGTTTCTGG+AGG 0.548514 1.2:-1409792 MS.gene24194:CDS
TGTTCAGATGAGAGGAGGGA+AGG 0.549074 1.2:-1409486 MS.gene24194:CDS
TGAATTAATGCATGAACGAA+TGG 0.549104 1.2:-1410357 None:intergenic
TTAATTTGATTAATAGGCAT+AGG 0.556871 1.2:+1410272 None:intergenic
AGCTGAGGCGTCACCAGCTG+AGG 0.557169 1.2:+1409831 None:intergenic
CCTCCTTTACAAGGTCGACC+TGG 0.557576 1.2:-1409357 MS.gene24194:CDS
CAACAGTCCCAACTGAAAGA+TGG 0.557734 1.2:-1408745 MS.gene24194:intron
TCAATCAGCTGCTCGCTCAA+AGG 0.558910 1.2:-1409054 MS.gene24194:CDS
CGCGGTCATGCTGTTCAGCA+TGG 0.560357 1.2:-1409936 MS.gene24194:CDS
GAACTTACATGATAAGGGGA+AGG 0.561647 1.2:+1410044 None:intergenic
AGGATAGGGACTGTGTTGAT+GGG 0.565060 1.2:-1409728 MS.gene24194:CDS
GCTCTGAATGAGACTTTGAA+TGG 0.567061 1.2:-1407745 MS.gene24194:CDS
CTACAGTGTGTCTTAAGCGC+CGG 0.567559 1.2:+1407716 None:intergenic
TTCCAATCGAAGCATCAGAA+TGG 0.567958 1.2:-1407511 MS.gene24194:CDS
GATTGTGGAGGCATAAATTG+GGG 0.570685 1.2:+1410146 None:intergenic
TTCAGATGAGAGGAGGGAAG+GGG 0.573694 1.2:-1409484 MS.gene24194:CDS
GAGAGTCGTGTAAATGTGAA+AGG 0.575120 1.2:-1409537 MS.gene24194:CDS
AGAATAAAGAGTACAAATTG+AGG 0.575659 1.2:-1408783 MS.gene24194:CDS
GTTTCTGGAGGAGAGAAACC+TGG 0.577894 1.2:-1409780 MS.gene24194:CDS
GCATGACCGCGGTTAGGCGA+AGG 0.578882 1.2:+1409948 None:intergenic
TGAACAGCATGACCGCGGTT+AGG 0.581630 1.2:+1409942 None:intergenic
TGACCAGGTCGACCTTGTAA+AGG 0.581765 1.2:+1409354 None:intergenic
GATGGGAGGAAAGAGAATGA+TGG 0.583007 1.2:-1409687 MS.gene24194:CDS
TTAGGGTTAGGGTATGAAGG+TGG 0.584414 1.2:+1410203 None:intergenic
TACATGATAAGGGGAAGGGG+AGG 0.586718 1.2:+1410049 None:intergenic
TTCCGCCTCGTAAAGGGCAT+AGG 0.587282 1.2:-1409905 MS.gene24194:CDS
CTTCTCCTATGTCGACCACT+AGG 0.587615 1.2:+1409432 None:intergenic
GTGAAAGGAATAGGTGCTAA+GGG 0.589966 1.2:-1409522 MS.gene24194:CDS
TTGCTCCTAGTGGTCGACAT+AGG 0.594057 1.2:-1409437 MS.gene24194:CDS
CAAGCTGTTCAGATGAGAGG+AGG 0.595367 1.2:-1409491 MS.gene24194:CDS
CGCCTCGTAAAGGGCATAGG+CGG 0.597353 1.2:-1409902 MS.gene24194:CDS
ACATGATAAGGGGAAGGGGA+GGG 0.597516 1.2:+1410050 None:intergenic
AGTAGGTTGTGACAAAGACC+TGG 0.598554 1.2:+1410112 None:intergenic
AAGCTGTTCAGATGAGAGGA+GGG 0.600858 1.2:-1409490 MS.gene24194:CDS
TCGCCTAGCAATTCAATGGA+TGG 0.602631 1.2:-1409327 MS.gene24194:CDS
AAATGGTGAATTCAGCTCAC+AGG 0.605226 1.2:-1409271 MS.gene24194:CDS
ACTTACATGATAAGGGGAAG+GGG 0.606066 1.2:+1410046 None:intergenic
TCGAACCCGATTCCGAAAAG+GGG 0.606202 1.2:+1410018 None:intergenic
TTATGAGAAGCCGATTCAGT+TGG 0.606692 1.2:-1409757 MS.gene24194:CDS
TTCGAAAGATGTTTCTATGG+AGG 0.608243 1.2:-1410000 MS.gene24194:CDS
TGAATCGGCTTCTCATAACC+AGG 0.610622 1.2:+1409762 None:intergenic
GTTTGAACTTACATGATAAG+GGG 0.611900 1.2:+1410040 None:intergenic
CAGCTGCTCGCTCAAAGGAG+CGG 0.613324 1.2:-1409049 MS.gene24194:CDS
GTTCAAGCTGTTCAGATGAG+AGG 0.616595 1.2:-1409494 MS.gene24194:CDS
TCGAGCCATAAGACCTGAGA+GGG 0.619641 1.2:+1407672 None:intergenic
CCAGGTCGACCTTGTAAAGG+AGG 0.621909 1.2:+1409357 None:intergenic
TGGTGAGTGTCAGTGATCGT+CGG 0.625242 1.2:-1409809 MS.gene24194:CDS
CAGAACCAGTGGTTCGAAGA+CGG 0.626425 1.2:-1409583 MS.gene24194:CDS
ATAGGATTCAATTGAATTGG+GGG 0.630004 1.2:+1410290 None:intergenic
TTACTGCAAACATTATGCAG+TGG 0.632905 1.2:+1407483 None:intergenic
TCACTGACACTCACCAGCTG+AGG 0.634783 1.2:+1409816 None:intergenic
TAAAACACCAGAAATCAGCA+TGG 0.660292 1.2:-1409301 MS.gene24194:CDS
CGCCTATGCCCTTTACGAGG+CGG 0.666230 1.2:+1409903 None:intergenic
ATGGAAGATAGCAGAACCAG+TGG 0.676860 1.2:-1409594 MS.gene24194:CDS
GACCGCCTATGCCCTTTACG+AGG 0.680484 1.2:+1409900 None:intergenic
AATGGAGATATTGCTCCTAG+TGG 0.680673 1.2:-1409447 MS.gene24194:CDS
CTGATCCCAAGCGTGCAAAG+AGG 0.685194 1.2:-1409200 MS.gene24194:intron
CATGCACCTTCGCCTAACCG+CGG 0.696591 1.2:-1409954 MS.gene24194:CDS
TAAACTTGCTGAAATTGCTG+CGG 0.696854 1.2:-1409223 MS.gene24194:CDS
GAATGAGTTTGAGATTGTGG+AGG 0.705083 1.2:+1410134 None:intergenic
GTCGAGCCATAAGACCTGAG+AGG 0.706228 1.2:+1407671 None:intergenic
CATGCTGAACAGCATGACCG+CGG 0.723874 1.2:+1409937 None:intergenic
CACACTGTAGCAGAACTAGG+CGG 0.776415 1.2:-1407703 MS.gene24194:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCAAATTAATCAAAT+GGG - chr1.2:1407582-1407601 MS.gene24194:CDS 10.0%
!! TATTAATCAAATTAATCAAA+TGG - chr1.2:1407581-1407600 MS.gene24194:CDS 10.0%
!!! ATTTGATTAATTTGATTAAT+AGG + chr1.2:1407582-1407601 None:intergenic 10.0%
!!! TTCAATATTAAAATTTTCAA+TGG + chr1.2:1408456-1408475 None:intergenic 10.0%
!!! GAATATAGTAATTCAAATTT+TGG - chr1.2:1409339-1409358 MS.gene24194:CDS 15.0%
!! AATTCACAAACTTAAGAAAA+AGG + chr1.2:1408941-1408960 None:intergenic 20.0%
!! CAAACTGTTTAAATGTAATA+TGG - chr1.2:1409511-1409530 MS.gene24194:CDS 20.0%
!! CTTAATACATGATACTAAAA+TGG + chr1.2:1409628-1409647 None:intergenic 20.0%
!! GAATCAATAGATAAAAAAGT+AGG + chr1.2:1407753-1407772 None:intergenic 20.0%
!! TAACTAGAACATAAAGTAAA+AGG + chr1.2:1409142-1409161 None:intergenic 20.0%
!! TGAATACATAGCTAAATATT+TGG + chr1.2:1410060-1410079 None:intergenic 20.0%
!!! ATATACTGTATGACAAATTT+TGG - chr1.2:1409311-1409330 MS.gene24194:CDS 20.0%
!!! ATATTTAGATGGATTTTATG+CGG - chr1.2:1409272-1409291 MS.gene24194:CDS 20.0%
!!! TGTGATTTTCTATATTTAGA+TGG - chr1.2:1409261-1409280 MS.gene24194:CDS 20.0%
!!! TTAATTTGATTAATAGGCAT+AGG + chr1.2:1407576-1407595 None:intergenic 20.0%
! AAGATCAAAAAATATGTTGC+TGG + chr1.2:1409947-1409966 None:intergenic 25.0%
! GATGAAATACATTTCTGAAT+TGG - chr1.2:1408821-1408840 MS.gene24194:intron 25.0%
! TAAATGTTGAATTCTCTTCT+AGG - chr1.2:1408754-1408773 MS.gene24194:CDS 25.0%
!! AGAATAAAGAGTACAAATTG+AGG - chr1.2:1409062-1409081 MS.gene24194:CDS 25.0%
!! TATGCACAATATGAGTTTTT+CGG - chr1.2:1408226-1408245 MS.gene24194:intron 25.0%
!! TTCCAAAAAAATAGTTTGCA+AGG + chr1.2:1409177-1409196 None:intergenic 25.0%
!!! AAAAACCAAAAGTACTATGT+AGG + chr1.2:1409423-1409442 None:intergenic 25.0%
!!! CTTTACTTTTTTATTGCACT+TGG - chr1.2:1409008-1409027 MS.gene24194:CDS 25.0%
!!! TACATAGTACTTTTGGTTTT+TGG - chr1.2:1409422-1409441 MS.gene24194:CDS 25.0%
!!! TTCCTTGCAAACTATTTTTT+TGG - chr1.2:1409172-1409191 MS.gene24194:intron 25.0%
!!! TTGTATATGCAGTTTTAAAG+AGG + chr1.2:1409494-1409513 None:intergenic 25.0%
!!! TTTTTTCCAAAAGAAAGACA+CGG + chr1.2:1408700-1408719 None:intergenic 25.0%
AAAAGAAAGACACGGAAATA+TGG + chr1.2:1408692-1408711 None:intergenic 30.0%
AAAGAAAGACACGGAAATAT+GGG + chr1.2:1408691-1408710 None:intergenic 30.0%
ACAGGAGATGAAGAAAATAA+TGG - chr1.2:1408592-1408611 MS.gene24194:intron 30.0%
ATAAACTGGTATTAGGGTTA+GGG + chr1.2:1407656-1407675 None:intergenic 30.0%
ATAGCAGCATACATGATATA+TGG + chr1.2:1408975-1408994 None:intergenic 30.0%
ATAGGATTCAATTGAATTGG+GGG + chr1.2:1407558-1407577 None:intergenic 30.0%
ATGCTGATAAAGAGATTCAT+AGG + chr1.2:1409862-1409881 None:intergenic 30.0%
CAGAAAAAAGTTCATGCATT+TGG - chr1.2:1407522-1407541 MS.gene24194:CDS 30.0%
CATAGGATTCAATTGAATTG+GGG + chr1.2:1407559-1407578 None:intergenic 30.0%
GCATAGGATTCAATTGAATT+GGG + chr1.2:1407560-1407579 None:intergenic 30.0%
GGTTTGAACTTACATGATAA+GGG + chr1.2:1407809-1407828 None:intergenic 30.0%
GTTTAGTGCTTACATGAATT+TGG - chr1.2:1408199-1408218 MS.gene24194:intron 30.0%
GTTTGAACTTACATGATAAG+GGG + chr1.2:1407808-1407827 None:intergenic 30.0%
TACTCAGTTTACCAAATTAC+AGG - chr1.2:1408887-1408906 MS.gene24194:intron 30.0%
TAGGTGATAAACTGGTATTA+GGG + chr1.2:1407662-1407681 None:intergenic 30.0%
TATTAACCAACAAATGTTCC+AGG - chr1.2:1410204-1410223 MS.gene24194:CDS 30.0%
TTAGGTGATAAACTGGTATT+AGG + chr1.2:1407663-1407682 None:intergenic 30.0%
! ATATTTCCGTGTCTTTCTTT+TGG - chr1.2:1408691-1408710 MS.gene24194:intron 30.0%
! ATGCACAATATGAGTTTTTC+GGG - chr1.2:1408227-1408246 MS.gene24194:intron 30.0%
! TCTATAAAGTTGATCCCATA+AGG + chr1.2:1409585-1409604 None:intergenic 30.0%
!!! AATCACAAAAGTTCTGGTTT+TGG - chr1.2:1407615-1407634 MS.gene24194:CDS 30.0%
!!! TGAATTCTCTTCTAGGATTT+TGG - chr1.2:1408761-1408780 MS.gene24194:CDS 30.0%
AACTTACATGATAAGGGGAA+GGG + chr1.2:1407803-1407822 None:intergenic 35.0%
ACAAATTCCGATATCCCTAA+AGG + chr1.2:1407984-1408003 None:intergenic 35.0%
ACATAGGAGAAGTTACTCAT+TGG - chr1.2:1408424-1408443 MS.gene24194:intron 35.0%
ATGCATACCATCTTTCAGTT+GGG + chr1.2:1409110-1409129 None:intergenic 35.0%
ATTCAGTACAATACGGTACT+TGG + chr1.2:1409451-1409470 None:intergenic 35.0%
ATTCTGCTATGCTATAGTGT+CGG - chr1.2:1409817-1409836 MS.gene24194:CDS 35.0%
CAGAGATCATTGAACAAGAT+TGG + chr1.2:1409373-1409392 None:intergenic 35.0%
CCAAGAGATTCAGTACAATA+CGG + chr1.2:1409458-1409477 None:intergenic 35.0%
CCTGAAAATCACAAAAGTTC+TGG - chr1.2:1407609-1407628 MS.gene24194:CDS 35.0%
CGTGTAAATGTGAAAGGAAT+AGG - chr1.2:1408314-1408333 MS.gene24194:intron 35.0%
GATAAACTGGTATTAGGGTT+AGG + chr1.2:1407657-1407676 None:intergenic 35.0%
GGCATAGGATTCAATTGAAT+TGG + chr1.2:1407561-1407580 None:intergenic 35.0%
GGGTTTGAACTTACATGATA+AGG + chr1.2:1407810-1407829 None:intergenic 35.0%
TAAAACACCAGAAATCAGCA+TGG - chr1.2:1408544-1408563 MS.gene24194:intron 35.0%
TAGTTTCTGTCTGAAGAGTT+TGG + chr1.2:1408857-1408876 None:intergenic 35.0%
TCAATTGCAGCACAAAATCA+AGG + chr1.2:1410023-1410042 None:intergenic 35.0%
TGATGGTTTAGGTGATAAAC+TGG + chr1.2:1407670-1407689 None:intergenic 35.0%
TGGAAATTTCTAAGCTGGTT+TGG + chr1.2:1410244-1410263 None:intergenic 35.0%
TTCAGTACAATACGGTACTT+GGG + chr1.2:1409450-1409469 None:intergenic 35.0%
! AAAGATGTTTCTATGGAGGA+TGG - chr1.2:1407849-1407868 MS.gene24194:intron 35.0%
! AATTACAGTGCTTCTGAAGA+AGG + chr1.2:1410000-1410019 None:intergenic 35.0%
! AGATTGTGGAGGCATAAATT+GGG + chr1.2:1407703-1407722 None:intergenic 35.0%
! ATTACAGTGCTTCTGAAGAA+GGG + chr1.2:1409999-1410018 None:intergenic 35.0%
! CCAGAACTTTTGTGATTTTC+AGG + chr1.2:1407612-1407631 None:intergenic 35.0%
! TGATTCACCTTTAGGGATAT+CGG - chr1.2:1407974-1407993 MS.gene24194:intron 35.0%
! TGTAAGTTCAAACCCCTTTT+CGG - chr1.2:1407815-1407834 MS.gene24194:intron 35.0%
! TGTAGGCAGGAAGATTTTAA+AGG + chr1.2:1409406-1409425 None:intergenic 35.0%
! TTCAATTGAATTGGGGGTTT+TGG + chr1.2:1407552-1407571 None:intergenic 35.0%
! TTCGAAAGATGTTTCTATGG+AGG - chr1.2:1407845-1407864 MS.gene24194:intron 35.0%
!! TAAACTTGCTGAAATTGCTG+CGG - chr1.2:1408622-1408641 MS.gene24194:intron 35.0%
!!! CAATATGAGTTTTTCGGGTA+TGG - chr1.2:1408232-1408251 MS.gene24194:intron 35.0%
AAATGGTGAATTCAGCTCAC+AGG - chr1.2:1408574-1408593 MS.gene24194:intron 40.0%
AATGGAGATATTGCTCCTAG+TGG - chr1.2:1408398-1408417 MS.gene24194:intron 40.0%
AATTGGGGATAAGGAGATGA+TGG + chr1.2:1407687-1407706 None:intergenic 40.0%
ACTATAGCCGCTATTTGACA+GGG - chr1.2:1409738-1409757 MS.gene24194:CDS 40.0%
ACTTACATGATAAGGGGAAG+GGG + chr1.2:1407802-1407821 None:intergenic 40.0%
ATATTGCCCCTGTCAAATAG+CGG + chr1.2:1409748-1409767 None:intergenic 40.0%
ATCAGCATGGAGTTTGGAAA+TGG - chr1.2:1408557-1408576 MS.gene24194:intron 40.0%
CAAATTGAGGCTTCAATCCT+TGG - chr1.2:1409075-1409094 MS.gene24194:intron 40.0%
CAAGCCTTAGTCTACCTTAT+GGG - chr1.2:1409568-1409587 MS.gene24194:CDS 40.0%
CACAATCTCAAACTCATTCC+AGG - chr1.2:1407715-1407734 MS.gene24194:CDS 40.0%
CATAAGCTTCCTCCTTTACA+AGG - chr1.2:1408479-1408498 MS.gene24194:intron 40.0%
CATGCATACCATCTTTCAGT+TGG + chr1.2:1409111-1409130 None:intergenic 40.0%
CATTTCTGAATTGGAGCAGA+AGG - chr1.2:1408830-1408849 MS.gene24194:intron 40.0%
CCGTATTGTACTGAATCTCT+TGG - chr1.2:1409455-1409474 MS.gene24194:CDS 40.0%
CTACCATCCATTGAATTGCT+AGG + chr1.2:1408524-1408543 None:intergenic 40.0%
CTAGCAGTGATTCACCTTTA+GGG - chr1.2:1407967-1407986 MS.gene24194:intron 40.0%
GAACTTACATGATAAGGGGA+AGG + chr1.2:1407804-1407823 None:intergenic 40.0%
GAGAGTCGTGTAAATGTGAA+AGG - chr1.2:1408308-1408327 MS.gene24194:intron 40.0%
GATGATACGCACCTGTAATT+TGG + chr1.2:1408901-1408920 None:intergenic 40.0%
GTATTAGGGTTAGGGTATGA+AGG + chr1.2:1407648-1407667 None:intergenic 40.0%
GTGAAAGGAATAGGTGCTAA+GGG - chr1.2:1408323-1408342 MS.gene24194:intron 40.0%
TACTATAGCCGCTATTTGAC+AGG - chr1.2:1409737-1409756 MS.gene24194:CDS 40.0%
TCCTTCAACACCAACTGAAT+CGG + chr1.2:1408101-1408120 None:intergenic 40.0%
TCTAGCAGTGATTCACCTTT+AGG - chr1.2:1407966-1407985 MS.gene24194:intron 40.0%
TGATCCCATAAGGTAGACTA+AGG + chr1.2:1409575-1409594 None:intergenic 40.0%
TGTGAAAGGAATAGGTGCTA+AGG - chr1.2:1408322-1408341 MS.gene24194:intron 40.0%
TTAGAGGAGAGAGTTTCGAT+GGG - chr1.2:1408141-1408160 MS.gene24194:intron 40.0%
TTATTGCACTTGGCTACAGA+TGG - chr1.2:1409018-1409037 MS.gene24194:CDS 40.0%
TTCAGTGTTGTCAATCACAG+CGG - chr1.2:1409667-1409686 MS.gene24194:CDS 40.0%
TTTAGAGGAGAGAGTTTCGA+TGG - chr1.2:1408140-1408159 MS.gene24194:intron 40.0%
! AGAGAATGATGGAGCTGAAA+TGG - chr1.2:1408169-1408188 MS.gene24194:intron 40.0%
! CTGGAATGAGTTTGAGATTG+TGG + chr1.2:1407717-1407736 None:intergenic 40.0%
! GAATGAGTTTGAGATTGTGG+AGG + chr1.2:1407714-1407733 None:intergenic 40.0%
! GAGATTGTGGAGGCATAAAT+TGG + chr1.2:1407704-1407723 None:intergenic 40.0%
! GATTGTGGAGGCATAAATTG+GGG + chr1.2:1407702-1407721 None:intergenic 40.0%
! GCTCTGAATGAGACTTTGAA+TGG - chr1.2:1410100-1410119 MS.gene24194:CDS 40.0%
! GGATAAGGAGATGATGGTTT+AGG + chr1.2:1407681-1407700 None:intergenic 40.0%
! GGGTTCGAAAGATGTTTCTA+TGG - chr1.2:1407842-1407861 MS.gene24194:intron 40.0%
! TCCTGCCTACATAGTACTTT+TGG - chr1.2:1409415-1409434 MS.gene24194:CDS 40.0%
! TTATGAGAAGCCGATTCAGT+TGG - chr1.2:1408088-1408107 MS.gene24194:intron 40.0%
! TTCAAACCCCTTTTCGGAAT+CGG - chr1.2:1407821-1407840 MS.gene24194:intron 40.0%
! TTCCAATCGAAGCATCAGAA+TGG - chr1.2:1410334-1410353 MS.gene24194:CDS 40.0%
!! ACCAAAAGTACTATGTAGGC+AGG + chr1.2:1409419-1409438 None:intergenic 40.0%
!! TCAGTTGGTGTTGAAGGATA+GGG - chr1.2:1408103-1408122 MS.gene24194:intron 40.0%
!! TTCAGTTGGTGTTGAAGGAT+AGG - chr1.2:1408102-1408121 MS.gene24194:intron 40.0%
AAGCTGTTCAGATGAGAGGA+GGG - chr1.2:1408355-1408374 MS.gene24194:intron 45.0%
AAGGATAGGGACTGTGTTGA+TGG - chr1.2:1408116-1408135 MS.gene24194:intron 45.0%
ACACTCGCCTAGCAATTCAA+TGG - chr1.2:1408514-1408533 MS.gene24194:intron 45.0%
AGACACACTGTAGCAGAACT+AGG - chr1.2:1410139-1410158 MS.gene24194:CDS 45.0%
AGACTTTGAATGGCGAAGTC+CGG - chr1.2:1410110-1410129 MS.gene24194:CDS 45.0%
AGTAGGTTGTGACAAAGACC+TGG + chr1.2:1407736-1407755 None:intergenic 45.0%
ATGGAAGATAGCAGAACCAG+TGG - chr1.2:1408251-1408270 MS.gene24194:intron 45.0%
ATTGTCTTCCGCCTCGTAAA+GGG - chr1.2:1407934-1407953 MS.gene24194:intron 45.0%
CAACAGTCCCAACTGAAAGA+TGG - chr1.2:1409100-1409119 MS.gene24194:intron 45.0%
CAATCACAGCGGAAAGTAGT+GGG - chr1.2:1409678-1409697 MS.gene24194:CDS 45.0%
CCAAGCCTTAGTCTACCTTA+TGG - chr1.2:1409567-1409586 MS.gene24194:CDS 45.0%
CCAGAAATCAGCATGGAGTT+TGG - chr1.2:1408551-1408570 MS.gene24194:intron 45.0%
CCATAAGGTAGACTAAGGCT+TGG + chr1.2:1409570-1409589 None:intergenic 45.0%
CCTATAGCACTGTAGCATAG+CGG + chr1.2:1409715-1409734 None:intergenic 45.0%
CGCTATGCTACAGTGCTATA+GGG - chr1.2:1409713-1409732 MS.gene24194:CDS 45.0%
CTATAGCCGCTATTTGACAG+GGG - chr1.2:1409739-1409758 MS.gene24194:CDS 45.0%
GATGGGAGGAAAGAGAATGA+TGG - chr1.2:1408158-1408177 MS.gene24194:intron 45.0%
GCTGTGATTGACAACACTGA+AGG + chr1.2:1409668-1409687 None:intergenic 45.0%
GTTCAAGCTGTTCAGATGAG+AGG - chr1.2:1408351-1408370 MS.gene24194:intron 45.0%
GTTTCTATGGAGGATGGCTT+GGG - chr1.2:1407855-1407874 MS.gene24194:intron 45.0%
TCAATCACAGCGGAAAGTAG+TGG - chr1.2:1409677-1409696 MS.gene24194:CDS 45.0%
TCGCCTAGCAATTCAATGGA+TGG - chr1.2:1408518-1408537 MS.gene24194:intron 45.0%
TCTTACCTCTTTGCACGCTT+GGG + chr1.2:1408653-1408672 None:intergenic 45.0%
TGCCATTCTGATGCTTCGAT+TGG + chr1.2:1410339-1410358 None:intergenic 45.0%
TGTCAGTGATCGTCGGAATT+TGG - chr1.2:1408043-1408062 MS.gene24194:intron 45.0%
TTAGGGTTAGGGTATGAAGG+TGG + chr1.2:1407645-1407664 None:intergenic 45.0%
TTCGAACCCGATTCCGAAAA+GGG + chr1.2:1407831-1407850 None:intergenic 45.0%
TTCTTACCTCTTTGCACGCT+TGG + chr1.2:1408654-1408673 None:intergenic 45.0%
TTTCGAACCCGATTCCGAAA+AGG + chr1.2:1407832-1407851 None:intergenic 45.0%
! AGGATAGGGACTGTGTTGAT+GGG - chr1.2:1408117-1408136 MS.gene24194:intron 45.0%
! GATCGTCGGAATTTGGTTTC+TGG - chr1.2:1408050-1408069 MS.gene24194:intron 45.0%
! GGAGGCATAAATTGGGGATA+AGG + chr1.2:1407696-1407715 None:intergenic 45.0%
! TCAAACCCCTTTTCGGAATC+GGG - chr1.2:1407822-1407841 MS.gene24194:intron 45.0%
! TGAATCGGCTTCTCATAACC+AGG + chr1.2:1408086-1408105 None:intergenic 45.0%
! TGTTTCTATGGAGGATGGCT+TGG - chr1.2:1407854-1407873 MS.gene24194:intron 45.0%
!! CCAAACTCCATGCTGATTTC+TGG + chr1.2:1408554-1408573 None:intergenic 45.0%
!! GACTGTGTTGATGGGTTTAG+AGG - chr1.2:1408125-1408144 MS.gene24194:intron 45.0%
ACATGATAAGGGGAAGGGGA+GGG + chr1.2:1407798-1407817 None:intergenic 50.0%
CAAGCTGTTCAGATGAGAGG+AGG - chr1.2:1408354-1408373 MS.gene24194:intron 50.0%
CACACTGTAGCAGAACTAGG+CGG - chr1.2:1410142-1410161 MS.gene24194:CDS 50.0%
CAGAACCAGTGGTTCGAAGA+CGG - chr1.2:1408262-1408281 MS.gene24194:intron 50.0%
CAGTTGGGACTGTTGTTCCA+AGG + chr1.2:1409095-1409114 None:intergenic 50.0%
CATTGTCTTCCGCCTCGTAA+AGG - chr1.2:1407933-1407952 MS.gene24194:intron 50.0%
CCGCTATGCTACAGTGCTAT+AGG - chr1.2:1409712-1409731 MS.gene24194:CDS 50.0%
CTACAGTGTGTCTTAAGCGC+CGG + chr1.2:1410132-1410151 None:intergenic 50.0%
CTTCTCCTATGTCGACCACT+AGG + chr1.2:1408416-1408435 None:intergenic 50.0%
GCGGCTGGAAATTTCTAAGC+TGG + chr1.2:1410249-1410268 None:intergenic 50.0%
GTTCAGATGAGAGGAGGGAA+GGG - chr1.2:1408360-1408379 MS.gene24194:intron 50.0%
TACATGATAAGGGGAAGGGG+AGG + chr1.2:1407799-1407818 None:intergenic 50.0%
TCAATCAGCTGCTCGCTCAA+AGG - chr1.2:1408791-1408810 MS.gene24194:CDS 50.0%
TCGAACCCGATTCCGAAAAG+GGG + chr1.2:1407830-1407849 None:intergenic 50.0%
TCGAGCCATAAGACCTGAGA+GGG + chr1.2:1410176-1410195 None:intergenic 50.0%
TGACCAGGTCGACCTTGTAA+AGG + chr1.2:1408494-1408513 None:intergenic 50.0%
TGGTGAGTGTCAGTGATCGT+CGG - chr1.2:1408036-1408055 MS.gene24194:intron 50.0%
TGTTAACTCTGTGCCTCAGC+TGG - chr1.2:1408001-1408020 MS.gene24194:intron 50.0%
TGTTCAGATGAGAGGAGGGA+AGG - chr1.2:1408359-1408378 MS.gene24194:intron 50.0%
TTCAACCGTCTTCGAACCAC+TGG + chr1.2:1408270-1408289 None:intergenic 50.0%
TTCAGATGAGAGGAGGGAAG+GGG - chr1.2:1408361-1408380 MS.gene24194:intron 50.0%
TTGCTCCTAGTGGTCGACAT+AGG - chr1.2:1408408-1408427 MS.gene24194:intron 50.0%
! CAGTGCTTCTGAAGAAGGGA+TGG + chr1.2:1409995-1410014 None:intergenic 50.0%
! CGTCGGAATTTGGTTTCTGG+AGG - chr1.2:1408053-1408072 MS.gene24194:intron 50.0%
! GCACTGTAGCATAGCGGAAT+TGG + chr1.2:1409709-1409728 None:intergenic 50.0%
! GGGGTCAAGAGGAGTTCTAA+TGG - chr1.2:1408380-1408399 MS.gene24194:intron 50.0%
! GTTAGGCGAAGGTGCATGAT+GGG + chr1.2:1407889-1407908 None:intergenic 50.0%
! GTTTCTGGAGGAGAGAAACC+TGG - chr1.2:1408065-1408084 MS.gene24194:intron 50.0%
! TGCTTCTGAAGAAGGGATGG+TGG + chr1.2:1409992-1410011 None:intergenic 50.0%
! TTCTGAAGAAGGGATGGTGG+TGG + chr1.2:1409989-1410008 None:intergenic 50.0%
!! ATGGAGGATGGCTTGGGTTT+TGG - chr1.2:1407861-1407880 MS.gene24194:intron 50.0%
!! GCCGATTCAGTTGGTGTTGA+AGG - chr1.2:1408097-1408116 MS.gene24194:intron 50.0%
!! TCCTGAGAGACGCTGTTTTG+CGG + chr1.2:1410268-1410287 None:intergenic 50.0%
CATGCTGAACAGCATGACCG+CGG + chr1.2:1407911-1407930 None:intergenic 55.0%
CCAGGTCGACCTTGTAAAGG+AGG + chr1.2:1408491-1408510 None:intergenic 55.0%
CCTCCTTTACAAGGTCGACC+TGG - chr1.2:1408488-1408507 MS.gene24194:intron 55.0%
CTGATCCCAAGCGTGCAAAG+AGG - chr1.2:1408645-1408664 MS.gene24194:intron 55.0%
GAGGAGAGAGTTTCGATGGG+AGG - chr1.2:1408144-1408163 MS.gene24194:intron 55.0%
GCTGCGCCTGGAACATTTGT+TGG + chr1.2:1410213-1410232 None:intergenic 55.0%
GTCGAGCCATAAGACCTGAG+AGG + chr1.2:1410177-1410196 None:intergenic 55.0%
GTCTGCCCTCTCAGGTCTTA+TGG - chr1.2:1410168-1410187 MS.gene24194:CDS 55.0%
TCACTGACACTCACCAGCTG+AGG + chr1.2:1408032-1408051 None:intergenic 55.0%
TGAACAGCATGACCGCGGTT+AGG + chr1.2:1407906-1407925 None:intergenic 55.0%
! GGTTAGGCGAAGGTGCATGA+TGG + chr1.2:1407890-1407909 None:intergenic 55.0%
! TTCCGCCTCGTAAAGGGCAT+AGG - chr1.2:1407940-1407959 MS.gene24194:intron 55.0%
!! TTGCTAGGCGAGTGTTGACC+AGG + chr1.2:1408509-1408528 None:intergenic 55.0%
AGAGGAGGGAAGGGGTCAAG+AGG - chr1.2:1408369-1408388 MS.gene24194:intron 60.0%
CAGCTGCTCGCTCAAAGGAG+CGG - chr1.2:1408796-1408815 MS.gene24194:CDS 60.0%
CATGCACCTTCGCCTAACCG+CGG - chr1.2:1407891-1407910 MS.gene24194:intron 60.0%
CGCCTATGCCCTTTACGAGG+CGG + chr1.2:1407945-1407964 None:intergenic 60.0%
CGCGGTCATGCTGTTCAGCA+TGG - chr1.2:1407909-1407928 MS.gene24194:intron 60.0%
GAAGGGGAGGGACTCAATGG+TGG + chr1.2:1407786-1407805 None:intergenic 60.0%
GACCGCCTATGCCCTTTACG+AGG + chr1.2:1407948-1407967 None:intergenic 60.0%
GCCGCAAAACAGCGTCTCTC+AGG - chr1.2:1410264-1410283 MS.gene24194:CDS 60.0%
! CGCCTCGTAAAGGGCATAGG+CGG - chr1.2:1407943-1407962 MS.gene24194:intron 60.0%
!! GAGAGACGCTGTTTTGCGGC+TGG + chr1.2:1410264-1410283 None:intergenic 60.0%
GCATGACCGCGGTTAGGCGA+AGG + chr1.2:1407900-1407919 None:intergenic 65.0%
GGGGAAGGGGAGGGACTCAA+TGG + chr1.2:1407789-1407808 None:intergenic 65.0%
TTGGCTGCTGATGCTGCGCC+TGG + chr1.2:1410225-1410244 None:intergenic 65.0%
! AGCTGAGGCGTCACCAGCTG+AGG + chr1.2:1408017-1408036 None:intergenic 65.0%
! TCAGCTGGTGACGCCTCAGC+TGG - chr1.2:1408016-1408035 MS.gene24194:intron 65.0%
GGCGGAGAGTCTGCCCTCTC+AGG - chr1.2:1410160-1410179 MS.gene24194:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 1407495 1410372 1407495 ID=MS.gene24194
chr1.2 mRNA 1407495 1410372 1407495 ID=MS.gene24194.t1;Parent=MS.gene24194
chr1.2 exon 1409201 1410372 1409201 ID=MS.gene24194.t1.exon1;Parent=MS.gene24194.t1
chr1.2 CDS 1409201 1410372 1409201 ID=cds.MS.gene24194.t1;Parent=MS.gene24194.t1
chr1.2 exon 1408959 1409091 1408959 ID=MS.gene24194.t1.exon2;Parent=MS.gene24194.t1
chr1.2 CDS 1408959 1409091 1408959 ID=cds.MS.gene24194.t1;Parent=MS.gene24194.t1
chr1.2 exon 1408746 1408830 1408746 ID=MS.gene24194.t1.exon3;Parent=MS.gene24194.t1
chr1.2 CDS 1408746 1408830 1408746 ID=cds.MS.gene24194.t1;Parent=MS.gene24194.t1
chr1.2 exon 1407495 1407766 1407495 ID=MS.gene24194.t1.exon4;Parent=MS.gene24194.t1
chr1.2 CDS 1407495 1407766 1407495 ID=cds.MS.gene24194.t1;Parent=MS.gene24194.t1
Gene Sequence

>MS.gene24194

ATGCATGAACGAATGGAGCGTTTTGATCAGAAAAAAGTTCATGCATTTGGTTCTCCAAAACCCCCAATTCAATTGAATCCTATGCCTATTAATCAAATTAATCAAATGGGTTTTCCTGAAAATCACAAAAGTTCTGGTTTTGGTATTCCACCTTCATACCCTAACCCTAATACCAGTTTATCACCTAAACCATCATCTCCTTATCCCCAATTTATGCCTCCACAATCTCAAACTCATTCCAGGTCTTTGTCACAACCTACTTTTTTATCTATTGATTCATTTTCTTTGCCACCATTGAGTCCCTCCCCTTCCCCTTATCATGTAAGTTCAAACCCCTTTTCGGAATCGGGTTCGAAAGATGTTTCTATGGAGGATGGCTTGGGTTTTGGTGCCCATCATGCACCTTCGCCTAACCGCGGTCATGCTGTTCAGCATGGTCATTGTCTTCCGCCTCGTAAAGGGCATAGGCGGTCTAGCAGTGATTCACCTTTAGGGATATCGGAATTTGTTAACTCTGTGCCTCAGCTGGTGACGCCTCAGCTGGTGAGTGTCAGTGATCGTCGGAATTTGGTTTCTGGAGGAGAGAAACCTGGTTATGAGAAGCCGATTCAGTTGGTGTTGAAGGATAGGGACTGTGTTGATGGGTTTAGAGGAGAGAGTTTCGATGGGAGGAAAGAGAATGATGGAGCTGAAATGGATGATTTGTTTAGTGCTTACATGAATTTGGAGAATATGCACAATATGAGTTTTTCGGGTATGGAAGATAGCAGAACCAGTGGTTCGAAGACGGTTGAAAGCAGCGATAATGAAGCTGAGAGTCGTGTAAATGTGAAAGGAATAGGTGCTAAGGGTGCGAGTTCAAGCTGTTCAGATGAGAGGAGGGAAGGGGTCAAGAGGAGTTCTAATGGAGATATTGCTCCTAGTGGTCGACATAGGAGAAGTTACTCATTGGATAGTTCCATTGAAAATTTTAATATTGAAGATCATAAGCTTCCTCCTTTACAAGGTCGACCTGGTCAACACTCGCCTAGCAATTCAATGGATGGTAGTAAAACACCAGAAATCAGCATGGAGTTTGGAAATGGTGAATTCAGCTCACAGGAGATGAAGAAAATAATGGAAAATGATAAACTTGCTGAAATTGCTGCGGCTGATCCCAAGCGTGCAAAGAGGTAAGAATTGTCTGTTCATTTCCCATATTTCCGTGTCTTTCTTTTGGAAAAAACATGAAAAAGTAAAACTTTAATAATGACTTATCATAAATGTTGAATTCTCTTCTAGGATTTTGGCTAATCGTCAATCAGCTGCTCGCTCAAAGGAGCGGAAGATGAAATACATTTCTGAATTGGAGCAGAAGGTCCAAACTCTTCAGACAGAAACTACTACTTTGTCTACTCAGTTTACCAAATTACAGGTGCGTATCATCTTAGTTGAAATGATGTTCCTTTTTCTTAAGTTTGTGAATTATATTTGATTTCCATATATCATGTATGCTGCTATTAATTCATTCATTCTTTACTTTTTTATTGCACTTGGCTACAGATGGATCATCAAGAGCTTAAAAGTGAGAATAAAGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAGTCCCAACTGAAAGATGGTATGCATGTGCTTATTCCTTTTACTTTATGTTCTAGTTAGCTGATATTTTTCCTTGCAAACTATTTTTTTGGAATTGATAATTGTGTTTTTTTTTTTTGCATAGAAATAACTTGCATATATGATCGTGCTCAAAGATATGTGATTTTCTATATTTAGATGGATTTTATGCGGAATAACACTATTTAGCATATACTGTATGACAAATTTTGGTGTTTGAATATAGTAATTCAAATTTTGGTTTTTGATCCAATCTTGTTCAATGATCTCTGCGCAACTGCACCTTTAAAATCTTCCTGCCTACATAGTACTTTTGGTTTTTGGAACCCAAGTACCGTATTGTACTGAATCTCTTGGTTGCATGTTATAACCTCTTTAAAACTGCATATACAAACTGTTTAAATGTAATATGGTTTTAGACTTCTGTTGAATAGCAACAACAATAACCAAGCCTTAGTCTACCTTATGGGATCAACTTTATAGATCAAATGACGTCATAGTTCTCCATTTTAGTATCATGTATTAAGTTCAGTGATAAACTTTACCTTCAGTGTTGTCAATCACAGCGGAAAGTAGTGGGTTGTTCCAATTCCGCTATGCTACAGTGCTATAGGGCTACTATAGCCGCTATTTGACAGGGGCAATATGCTAAATAGCGTATGACAGAACAATAACAAACAAAAACTATTTATTTAAATTCTGCTATGCTATAGTGTCGGTATTTGACAACATTGTTTACCTATGAATCTCTTTATCAGCATTTTTCAGCACTAGATTTCATTATCAATGCATTATACACTTTAAGTAGCATCATTCTAAGACACCAGCAACATATTTTTTGATCTTGTTTCTACATATCTTCATGCCACCACCATCCCTTCTTCAGAAGCACTGTAATTCCTTGATTTTGTGCTGCAATTGATTATCTTCACTGAACCAAATATTTAGCTATGTATTCATTTGTGTTCTTATTTTCGCAGCTCTGAATGAGACTTTGAATGGCGAAGTCCGGCGCTTAAGACACACTGTAGCAGAACTAGGCGGAGAGTCTGCCCTCTCAGGTCTTATGGCTCGACAGCTTGCTATTAACCAACAAATGTTCCAGGCGCAGCATCAGCAGCCAAACCAGCTTAGAAATTTCCAGCCGCAAAACAGCGTCTCTCAGGAAGAAACACAGACTCAGTCGCAGCAGCATATTCAACGCAATCATGAATTCCAATCGAAGCATCAGAATGGCAAAACCACTGCATAA
Protein sequence

>MS.gene24194.t1

MHERMERFDQKKVHAFGSPKPPIQLNPMPINQINQMGFPENHKSSGFGIPPSYPNPNTSLSPKPSSPYPQFMPPQSQTHSRSLSQPTFLSIDSFSLPPLSPSPSPYHVSSNPFSESGSKDVSMEDGLGFGAHHAPSPNRGHAVQHGHCLPPRKGHRRSSSDSPLGISEFVNSVPQLVTPQLVSVSDRRNLVSGGEKPGYEKPIQLVLKDRDCVDGFRGESFDGRKENDGAEMDDLFSAYMNLENMHNMSFSGMEDSRTSGSKTVESSDNEAESRVNVKGIGAKGASSSCSDERREGVKRSSNGDIAPSGRHRRSYSLDSSIENFNIEDHKLPPLQGRPGQHSPSNSMDGSKTPEISMEFGNGEFSSQEMKKIMENDKLAEIAAADPKRAKRILANRQSAARSKERKMKYISELEQKVQTLQTETTTLSTQFTKLQMDHQELKSENKEYKLRLQSLEQQSQLKDALNETLNGEVRRLRHTVAELGGESALSGLMARQLAINQQMFQAQHQQPNQLRNFQPQNSVSQEETQTQSQQHIQRNHEFQSKHQNGKTTA