Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24209.t1 | GAU33477.1 | 49.9 | 579 | 192 | 11 | 121 | 682 | 68 | 565 | 5.40E-134 | 488.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24209.t1 | Q9SZL8 | 32.8 | 186 | 114 | 6 | 105 | 283 | 77 | 258 | 2.1e-14 | 82.4 |
| MS.gene24209.t1 | Q9SZL8 | 32.7 | 110 | 72 | 1 | 283 | 392 | 531 | 638 | 3.5e-09 | 65.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24209.t1 | A0A2Z6NTS8 | 49.9 | 579 | 192 | 11 | 121 | 682 | 68 | 565 | 3.9e-134 | 488.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene24209.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24209.t1 | MTR_3g080590 | 85.161 | 155 | 19 | 1 | 1 | 151 | 1 | 155 | 4.03e-78 | 246 |
| MS.gene24209.t1 | MTR_7g446520 | 43.915 | 189 | 91 | 1 | 94 | 282 | 81 | 254 | 2.94e-44 | 162 |
| MS.gene24209.t1 | MTR_7g446480 | 51.852 | 108 | 52 | 0 | 175 | 282 | 140 | 247 | 6.05e-31 | 124 |
| MS.gene24209.t1 | MTR_7g028855 | 43.709 | 151 | 82 | 1 | 94 | 241 | 113 | 263 | 6.73e-31 | 127 |
| MS.gene24209.t1 | MTR_7g446510 | 50.926 | 108 | 53 | 0 | 175 | 282 | 155 | 262 | 3.79e-28 | 116 |
| MS.gene24209.t1 | MTR_1g070355 | 31.818 | 176 | 117 | 1 | 101 | 273 | 74 | 249 | 9.03e-22 | 100 |
| MS.gene24209.t1 | MTR_5g076070 | 29.518 | 166 | 114 | 2 | 98 | 260 | 50 | 215 | 5.92e-21 | 94.0 |
| MS.gene24209.t1 | MTR_6g022080 | 26.471 | 170 | 122 | 1 | 94 | 260 | 78 | 247 | 1.51e-18 | 86.3 |
| MS.gene24209.t1 | MTR_8g035530 | 45.455 | 77 | 40 | 1 | 88 | 164 | 1 | 75 | 2.70e-16 | 74.3 |
| MS.gene24209.t1 | MTR_0402s0040 | 29.885 | 174 | 117 | 5 | 104 | 274 | 29 | 200 | 1.58e-13 | 73.9 |
| MS.gene24209.t1 | MTR_4g035820 | 28.877 | 187 | 124 | 4 | 107 | 286 | 81 | 265 | 2.01e-13 | 73.9 |
| MS.gene24209.t1 | MTR_3g450850 | 29.651 | 172 | 109 | 4 | 107 | 266 | 53 | 224 | 2.73e-13 | 72.4 |
| MS.gene24209.t1 | MTR_6g051425 | 28.804 | 184 | 120 | 6 | 108 | 283 | 24 | 204 | 4.49e-12 | 68.6 |
| MS.gene24209.t1 | MTR_1g008290 | 31.579 | 114 | 73 | 2 | 169 | 282 | 21 | 129 | 1.80e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24209.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 2.31e-19 | 92.8 |
| MS.gene24209.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 2.44e-19 | 92.8 |
| MS.gene24209.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 2.60e-19 | 93.2 |
| MS.gene24209.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 2.60e-19 | 93.2 |
| MS.gene24209.t1 | AT5G28530 | 33.898 | 177 | 111 | 4 | 107 | 278 | 61 | 236 | 2.60e-19 | 93.2 |
| MS.gene24209.t1 | AT4G38180 | 31.227 | 269 | 163 | 10 | 23 | 283 | 4 | 258 | 2.84e-15 | 80.1 |
| MS.gene24209.t1 | AT4G38180 | 32.727 | 110 | 72 | 1 | 283 | 392 | 531 | 638 | 1.59e-11 | 68.2 |
| MS.gene24209.t1 | AT1G10240 | 30.508 | 177 | 108 | 6 | 107 | 272 | 54 | 226 | 5.82e-13 | 72.8 |
| MS.gene24209.t1 | AT1G10240 | 30.508 | 177 | 108 | 6 | 107 | 272 | 54 | 226 | 5.82e-13 | 72.8 |
Find 129 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACTTGCAACAAATTTAT+TGG | 0.144674 | 1.2:-1568072 | None:intergenic |
| TCAATGTTGATTGTGATATT+TGG | 0.171428 | 1.2:-1568609 | None:intergenic |
| AAAATTGATCCACCATTATT+TGG | 0.177287 | 1.2:-1568846 | None:intergenic |
| CTCTTGCAAATCAGACTTTC+AGG | 0.192125 | 1.2:-1567819 | None:intergenic |
| CCCATAGTTTCTCAATGTTT+TGG | 0.242135 | 1.2:-1569103 | None:intergenic |
| AAATGATGATATAAGGGATA+TGG | 0.309095 | 1.2:+1566183 | MS.gene24209:CDS |
| TAACACCATACCCAACATTA+TGG | 0.313783 | 1.2:-1568797 | None:intergenic |
| AGGACTTGGGTTTATCAAAA+AGG | 0.326599 | 1.2:+1566636 | MS.gene24209:CDS |
| TGATAAACCCAAGTCCTTCA+TGG | 0.346028 | 1.2:-1566630 | None:intergenic |
| ATGTGACAAATGATGATATA+AGG | 0.351919 | 1.2:+1566176 | MS.gene24209:CDS |
| ACGACTTTGTTCGTACGATT+TGG | 0.356788 | 1.2:+1566431 | MS.gene24209:CDS |
| ACACCAATTCCAGCAAGTTC+TGG | 0.360337 | 1.2:-1568227 | None:intergenic |
| TAAGAGCGCAAGTGATTATA+AGG | 0.371814 | 1.2:+1567971 | MS.gene24209:CDS |
| TGTAAGAACATGTCATATCT+TGG | 0.387474 | 1.2:+1566582 | MS.gene24209:CDS |
| CACTATGGGGTGCCAAATAA+TGG | 0.393131 | 1.2:+1568834 | MS.gene24209:CDS |
| ATCCATGTTGTCATACTTCA+TGG | 0.394339 | 1.2:-1567790 | None:intergenic |
| TAAATTTGTTGCAAGTGATA+AGG | 0.398861 | 1.2:+1568076 | MS.gene24209:CDS |
| ATCATTCGCAACAAATTTGT+TGG | 0.403036 | 1.2:-1568099 | None:intergenic |
| TCTAACACTGCTCTGCATAC+TGG | 0.407068 | 1.2:+1568906 | MS.gene24209:CDS |
| ATATAATTTCACGGATCATC+AGG | 0.409639 | 1.2:+1566663 | MS.gene24209:CDS |
| GATTATAAGGAGGCTCTAGA+AGG | 0.413898 | 1.2:+1567984 | MS.gene24209:CDS |
| GATTCATTATCAGACTCAAT+AGG | 0.414121 | 1.2:-1568282 | None:intergenic |
| GCACTGGTATTACACGTAAG+AGG | 0.418801 | 1.2:+1568490 | MS.gene24209:CDS |
| AACAAATACAAGCACTAGAA+AGG | 0.422563 | 1.2:+1568569 | MS.gene24209:CDS |
| TGTCCAGAACTTGCTGGAAT+TGG | 0.422787 | 1.2:+1568224 | MS.gene24209:CDS |
| AAAGTTTAAAGATGTCAAAA+AGG | 0.436388 | 1.2:+1567569 | MS.gene24209:CDS |
| CGCAGAACAATTAGTTCGAA+TGG | 0.445789 | 1.2:-1566392 | None:intergenic |
| TATCAACTTCACTCAATTTG+CGG | 0.446828 | 1.2:-1566528 | None:intergenic |
| AAGGGTGGCCATGAAGGACT+TGG | 0.449428 | 1.2:+1566622 | MS.gene24209:CDS |
| GTAAGAACATGTCATATCTT+GGG | 0.464989 | 1.2:+1566583 | MS.gene24209:CDS |
| GCGTCAATTAGTATGCAATA+AGG | 0.467578 | 1.2:+1566318 | MS.gene24209:CDS |
| AACGCAAAGGAGCTAATTCA+TGG | 0.469712 | 1.2:-1566483 | None:intergenic |
| TTCGAATGGTTAGCGTAGAT+CGG | 0.476853 | 1.2:-1566378 | None:intergenic |
| AATAGCCGTCATGAGGGAAA+TGG | 0.477370 | 1.2:+1568032 | MS.gene24209:CDS |
| CAAGGGAAAGAGAACTTTGA+TGG | 0.478759 | 1.2:+1566136 | MS.gene24209:CDS |
| TCACTCAATTTGCGGTAAGT+AGG | 0.481609 | 1.2:-1566520 | None:intergenic |
| CGGACGTGTCCAGAACTTGC+TGG | 0.483560 | 1.2:+1568218 | MS.gene24209:CDS |
| TGCGGTAAGTAGGCATCAAA+TGG | 0.489623 | 1.2:-1566510 | None:intergenic |
| ATGTGAAACGTGATTCTAAT+GGG | 0.492055 | 1.2:+1566284 | MS.gene24209:CDS |
| AAAGGACTTATATAATTTCA+CGG | 0.493961 | 1.2:+1566654 | MS.gene24209:CDS |
| CACTCTGTAGCAGTGTCAAA+TGG | 0.499398 | 1.2:+1568447 | MS.gene24209:CDS |
| GAAATCCAGGGCACACAATA+CGG | 0.501184 | 1.2:+1568198 | MS.gene24209:intron |
| AGTGTTAGAATGTGATGAGA+GGG | 0.502952 | 1.2:-1568892 | None:intergenic |
| AATGGTGTGACCCGTGACTT+TGG | 0.505092 | 1.2:+1568726 | MS.gene24209:CDS |
| GCAAGGGTTAAAATACAAGA+TGG | 0.508614 | 1.2:+1566685 | MS.gene24209:CDS |
| GTATCACTATATACATCAAA+AGG | 0.509968 | 1.2:-1565917 | None:intergenic |
| GGTCAAAAGGGTGGCCATGA+AGG | 0.510809 | 1.2:+1566616 | MS.gene24209:CDS |
| CCACGGGTTTGAAGTAAGAA+AGG | 0.512169 | 1.2:+1566258 | MS.gene24209:CDS |
| TGTGATGAGAGGGTAGTTGT+CGG | 0.513549 | 1.2:-1568882 | None:intergenic |
| GATGTGAAACGTGATTCTAA+TGG | 0.514927 | 1.2:+1566283 | MS.gene24209:CDS |
| ATTTAGTCTGCAACTTGTCA+AGG | 0.524883 | 1.2:-1567707 | None:intergenic |
| AAATGGACATGACAAGGATA+AGG | 0.524930 | 1.2:+1568049 | MS.gene24209:CDS |
| CAAGGGTTAAAATACAAGAT+GGG | 0.527779 | 1.2:+1566686 | MS.gene24209:CDS |
| AACAACGATGTTCGTACTGA+TGG | 0.529175 | 1.2:+1566064 | MS.gene24209:CDS |
| AAAGTCTGATTTGCAAGAGA+TGG | 0.531904 | 1.2:+1567823 | MS.gene24209:CDS |
| ACAAATACAAGCACTAGAAA+GGG | 0.535750 | 1.2:+1568570 | MS.gene24209:CDS |
| GTAGTTGTCGGAGGGAATTG+TGG | 0.539742 | 1.2:-1568870 | None:intergenic |
| TGTGACAAATGATGATATAA+GGG | 0.541240 | 1.2:+1566177 | MS.gene24209:CDS |
| AATAAGGAGGGTGTTAATGA+TGG | 0.543414 | 1.2:+1566334 | MS.gene24209:CDS |
| AAGACAGCCATTGTGCAAGT+TGG | 0.545484 | 1.2:+1568772 | MS.gene24209:CDS |
| AGCTAATTCATGGTTGTGAG+AGG | 0.545517 | 1.2:-1566473 | None:intergenic |
| ACTTCATGGCACAAATAATG+TGG | 0.547507 | 1.2:-1567776 | None:intergenic |
| TCGTCATTTGCCTCCCAAGA+AGG | 0.555407 | 1.2:+1567873 | MS.gene24209:CDS |
| CACTGGTATTACACGTAAGA+GGG | 0.559146 | 1.2:+1568491 | MS.gene24209:CDS |
| GGTGTCGTGTCTGAAGATCA+AGG | 0.560464 | 1.2:+1568245 | MS.gene24209:CDS |
| CAGTGTTAGAATGTGATGAG+AGG | 0.563750 | 1.2:-1568893 | None:intergenic |
| TTCATCATTACCTTCTTGGG+AGG | 0.565482 | 1.2:-1567883 | None:intergenic |
| CGAGAAGTTGAGAAAAGCAC+TGG | 0.569609 | 1.2:+1568474 | MS.gene24209:CDS |
| AAGTGCCCCTCGACAAAACA+TGG | 0.570423 | 1.2:-1567913 | None:intergenic |
| TATTATTTGCAAAATACCAC+GGG | 0.572281 | 1.2:+1566242 | MS.gene24209:CDS |
| CCTTTGACATTCACCATCAG+TGG | 0.574175 | 1.2:-1568122 | None:intergenic |
| GTGGAATTTAACCATGGTAA+TGG | 0.576772 | 1.2:+1566100 | MS.gene24209:CDS |
| GAAGCTTCAAAGATATTCAT+CGG | 0.578019 | 1.2:+1567543 | MS.gene24209:intron |
| GCACAAATAATGTGGGAACA+TGG | 0.578248 | 1.2:-1567768 | None:intergenic |
| GACATTGATAGTGATACAGA+TGG | 0.581147 | 1.2:+1565974 | MS.gene24209:CDS |
| GTGTCGTGTCTGAAGATCAA+GGG | 0.581492 | 1.2:+1568246 | MS.gene24209:CDS |
| GCTAATTCATGGTTGTGAGA+GGG | 0.581523 | 1.2:-1566472 | None:intergenic |
| TCAATTAGTATGCAATAAGG+AGG | 0.584633 | 1.2:+1566321 | MS.gene24209:CDS |
| GTATTATTTGCAAAATACCA+CGG | 0.584890 | 1.2:+1566241 | MS.gene24209:CDS |
| GCAAGTTGGAACCATAATGT+TGG | 0.585606 | 1.2:+1568786 | MS.gene24209:CDS |
| TAAGATAAATAGCCGTCATG+AGG | 0.585792 | 1.2:+1568025 | MS.gene24209:CDS |
| AGGGTGGCCATGAAGGACTT+GGG | 0.586883 | 1.2:+1566623 | MS.gene24209:CDS |
| AAGATAAATAGCCGTCATGA+GGG | 0.587755 | 1.2:+1568026 | MS.gene24209:CDS |
| ATACTCACCGGTGTATAACT+CGG | 0.588936 | 1.2:-1568942 | None:intergenic |
| ATGAGAGGGTAGTTGTCGGA+GGG | 0.591320 | 1.2:-1568878 | None:intergenic |
| CATGTCCATTTCCCTCATGA+CGG | 0.591948 | 1.2:-1568037 | None:intergenic |
| ATTTCACGGATCATCAGGCA+AGG | 0.592596 | 1.2:+1566668 | MS.gene24209:CDS |
| TGGAACCATAATGTTGGGTA+TGG | 0.594448 | 1.2:+1568792 | MS.gene24209:CDS |
| CTTCATGGCACAAATAATGT+GGG | 0.594948 | 1.2:-1567775 | None:intergenic |
| TATGAGTGCGTTGAAGAATG+TGG | 0.597255 | 1.2:+1569045 | MS.gene24209:CDS |
| TGATAGTGATACAGATGGGG+TGG | 0.597988 | 1.2:+1565979 | MS.gene24209:CDS |
| GAACGAGATGAAGATGAGGA+TGG | 0.598765 | 1.2:+1567624 | MS.gene24209:CDS |
| CAAGTTGGAACCATAATGTT+GGG | 0.599464 | 1.2:+1568787 | MS.gene24209:CDS |
| ATATAGTGATACAGATGAGG+TGG | 0.607738 | 1.2:+1565928 | MS.gene24209:CDS |
| AAGGGTTAAAATACAAGATG+GGG | 0.610552 | 1.2:+1566687 | MS.gene24209:CDS |
| AAACATCGCAGTGACTATTG+TGG | 0.611836 | 1.2:+1569079 | MS.gene24209:CDS |
| ATTATAAGGAGGCTCTAGAA+GGG | 0.613050 | 1.2:+1567985 | MS.gene24209:CDS |
| GCTACTTTGAGTTACTTCCA+AGG | 0.617165 | 1.2:+1566718 | MS.gene24209:CDS |
| GTTGATAAACAAGTTGCTAG+TGG | 0.617676 | 1.2:+1566544 | MS.gene24209:CDS |
| GATGAGAGGGTAGTTGTCGG+AGG | 0.619255 | 1.2:-1568879 | None:intergenic |
| CATTGAACGAGATGAAGATG+AGG | 0.623154 | 1.2:+1567620 | MS.gene24209:CDS |
| TATGGTTCCAACTTGCACAA+TGG | 0.627946 | 1.2:-1568779 | None:intergenic |
| TTTCACGGATCATCAGGCAA+GGG | 0.637022 | 1.2:+1566669 | MS.gene24209:CDS |
| CCTTTCTTACTTCAAACCCG+TGG | 0.639832 | 1.2:-1566258 | None:intergenic |
| CATTGCAAACACCATTACCA+TGG | 0.642035 | 1.2:-1566111 | None:intergenic |
| TATGGGGTGCCAAATAATGG+TGG | 0.646881 | 1.2:+1568837 | MS.gene24209:CDS |
| AATGGTGTTTGCAATGAGCA+AGG | 0.648235 | 1.2:+1566118 | MS.gene24209:CDS |
| GCTAGTGGTCTACATTCGCA+AGG | 0.649023 | 1.2:+1566559 | MS.gene24209:CDS |
| ATCAAATGGACAAAACGCAA+AGG | 0.651947 | 1.2:-1566496 | None:intergenic |
| TGAGGGAAATGGACATGACA+AGG | 0.654599 | 1.2:+1568043 | MS.gene24209:CDS |
| ACATTGATAGTGATACAGAT+GGG | 0.654877 | 1.2:+1565975 | MS.gene24209:CDS |
| TGTCGTGTCTGAAGATCAAG+GGG | 0.656613 | 1.2:+1568247 | MS.gene24209:CDS |
| ATGGTGTTTGCAATGAGCAA+GGG | 0.657603 | 1.2:+1566119 | MS.gene24209:CDS |
| TCTGTAGCAGTGTCAAATGG+TGG | 0.657609 | 1.2:+1568450 | MS.gene24209:CDS |
| TGATGGAGATGCAGACGGTG+TGG | 0.660310 | 1.2:+1566081 | MS.gene24209:CDS |
| TGCCATGAAGTATGACAACA+TGG | 0.671427 | 1.2:+1567788 | MS.gene24209:CDS |
| CAATTAGTATGCAATAAGGA+GGG | 0.675920 | 1.2:+1566322 | MS.gene24209:CDS |
| CAATGTTCCGAGTTATACAC+CGG | 0.682160 | 1.2:+1568935 | MS.gene24209:CDS |
| CATTTGACACTGCTACAGAG+TGG | 0.682675 | 1.2:-1568446 | None:intergenic |
| GAGCGCAAGTGATTATAAGG+AGG | 0.683366 | 1.2:+1567974 | MS.gene24209:CDS |
| TGTTGCGAATGATCCACTGA+TGG | 0.687875 | 1.2:+1568109 | MS.gene24209:CDS |
| GACGGTGTGGAATTTAACCA+TGG | 0.688761 | 1.2:+1566094 | MS.gene24209:CDS |
| TGTATATAGTGATACAGATG+AGG | 0.703043 | 1.2:+1565925 | MS.gene24209:CDS |
| TGTAGACGCTTTGAACGCAG+AGG | 0.705116 | 1.2:+1567741 | MS.gene24209:CDS |
| CGTACTGATGGAGATGCAGA+CGG | 0.711480 | 1.2:+1566076 | MS.gene24209:CDS |
| ACATAGACTATTGAACGCAG+CGG | 0.723695 | 1.2:-1567937 | None:intergenic |
| CATTGATAGTGATACAGATG+GGG | 0.737791 | 1.2:+1565976 | MS.gene24209:CDS |
| GGATATGGAATTCAACACAG+AGG | 0.763384 | 1.2:+1566198 | MS.gene24209:CDS |
| GTCGTGTCTGAAGATCAAGG+GGG | 0.856783 | 1.2:+1568248 | MS.gene24209:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAATATGCACTA+TGG | + | chr1.2:1568819-1568838 | MS.gene24209:CDS | 15.0% |
| !!! | ATTATTTTAATATGCACTAT+GGG | + | chr1.2:1568820-1568839 | MS.gene24209:CDS | 15.0% |
| !!! | TCATAAACTGTTTTAAATAT+AGG | - | chr1.2:1569030-1569049 | None:intergenic | 15.0% |
| !!! | TGAAATTGTATATGATATTT+TGG | + | chr1.2:1568375-1568394 | MS.gene24209:intron | 15.0% |
| !! | AAAGGACTTATATAATTTCA+CGG | + | chr1.2:1566654-1566673 | MS.gene24209:CDS | 20.0% |
| !! | AAAGTTTAAAGATGTCAAAA+AGG | + | chr1.2:1567569-1567588 | MS.gene24209:CDS | 20.0% |
| !!! | ATTTTCAAGGTTAATGTATT+TGG | + | chr1.2:1567657-1567676 | MS.gene24209:CDS | 20.0% |
| !!! | TTATTTTAATATGCACTATG+GGG | + | chr1.2:1568821-1568840 | MS.gene24209:CDS | 20.0% |
| !!! | TTGTTTTAATTGTTGTAGAA+TGG | + | chr1.2:1568708-1568727 | MS.gene24209:intron | 20.0% |
| ! | AAAATTGATCCACCATTATT+TGG | - | chr1.2:1568849-1568868 | None:intergenic | 25.0% |
| ! | AAATGATGATATAAGGGATA+TGG | + | chr1.2:1566183-1566202 | MS.gene24209:CDS | 25.0% |
| ! | AATTAAAGCACAAGCAAAAA+TGG | - | chr1.2:1566950-1566969 | None:intergenic | 25.0% |
| ! | ATATCCACTAAAAATGACAA+GGG | - | chr1.2:1566908-1566927 | None:intergenic | 25.0% |
| ! | ATCACTTGCAACAAATTTAT+TGG | - | chr1.2:1568075-1568094 | None:intergenic | 25.0% |
| ! | ATGTGACAAATGATGATATA+AGG | + | chr1.2:1566176-1566195 | MS.gene24209:CDS | 25.0% |
| ! | CAGCAAATATACTATAACAA+AGG | - | chr1.2:1568645-1568664 | None:intergenic | 25.0% |
| ! | GATGGAAAAAATAAGAAGAA+TGG | + | chr1.2:1566352-1566371 | MS.gene24209:CDS | 25.0% |
| ! | GGTGGGTAAAAAAAAATTAT+CGG | + | chr1.2:1567274-1567293 | MS.gene24209:intron | 25.0% |
| ! | GTATCACTATATACATCAAA+AGG | - | chr1.2:1565920-1565939 | None:intergenic | 25.0% |
| ! | GTATTATTTGCAAAATACCA+CGG | + | chr1.2:1566241-1566260 | MS.gene24209:CDS | 25.0% |
| ! | TAAACAATCAAAATACTCAC+CGG | - | chr1.2:1568957-1568976 | None:intergenic | 25.0% |
| ! | TATATCCACTAAAAATGACA+AGG | - | chr1.2:1566909-1566928 | None:intergenic | 25.0% |
| ! | TATTATTTGCAAAATACCAC+GGG | + | chr1.2:1566242-1566261 | MS.gene24209:CDS | 25.0% |
| ! | TGTGACAAATGATGATATAA+GGG | + | chr1.2:1566177-1566196 | MS.gene24209:CDS | 25.0% |
| !! | CAAAAAAGATGTAGCTTTTT+CGG | + | chr1.2:1567680-1567699 | MS.gene24209:CDS | 25.0% |
| !! | TCAATGTTGATTGTGATATT+TGG | - | chr1.2:1568612-1568631 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTACCTTCTT+GGG | - | chr1.2:1567889-1567908 | None:intergenic | 25.0% |
| !!! | GGTTCTAAATTTGTTTTCAA+AGG | + | chr1.2:1566999-1567018 | MS.gene24209:intron | 25.0% |
| !!! | TAAATTTGTTGCAAGTGATA+AGG | + | chr1.2:1568076-1568095 | MS.gene24209:CDS | 25.0% |
| !!! | TTTTTTCATCATTACCTTCT+TGG | - | chr1.2:1567890-1567909 | None:intergenic | 25.0% |
| AAACAATAGAGACATACAAG+TGG | + | chr1.2:1566977-1566996 | MS.gene24209:intron | 30.0% | |
| AACAAATACAAGCACTAGAA+AGG | + | chr1.2:1568569-1568588 | MS.gene24209:CDS | 30.0% | |
| AACAATAGAGACATACAAGT+GGG | + | chr1.2:1566978-1566997 | MS.gene24209:intron | 30.0% | |
| AAGGGTTAAAATACAAGATG+GGG | + | chr1.2:1566687-1566706 | MS.gene24209:CDS | 30.0% | |
| AATTATGCAAGAAATCCACA+AGG | - | chr1.2:1567419-1567438 | None:intergenic | 30.0% | |
| ACAAATACAAGCACTAGAAA+GGG | + | chr1.2:1568570-1568589 | MS.gene24209:CDS | 30.0% | |
| ACCTATAGAAAGAACAAGTA+TGG | + | chr1.2:1566877-1566896 | MS.gene24209:intron | 30.0% | |
| ATACTTGTTCTTTCTATAGG+TGG | - | chr1.2:1566878-1566897 | None:intergenic | 30.0% | |
| ATATAATTTCACGGATCATC+AGG | + | chr1.2:1566663-1566682 | MS.gene24209:CDS | 30.0% | |
| ATCATTCGCAACAAATTTGT+TGG | - | chr1.2:1568102-1568121 | None:intergenic | 30.0% | |
| ATGTGAAACGTGATTCTAAT+GGG | + | chr1.2:1566284-1566303 | MS.gene24209:CDS | 30.0% | |
| CAAGGGTTAAAATACAAGAT+GGG | + | chr1.2:1566686-1566705 | MS.gene24209:CDS | 30.0% | |
| CAATTAGTATGCAATAAGGA+GGG | + | chr1.2:1566322-1566341 | MS.gene24209:CDS | 30.0% | |
| GAAGCTTCAAAGATATTCAT+CGG | + | chr1.2:1567543-1567562 | MS.gene24209:intron | 30.0% | |
| GAGTTTACATTTACAGATGA+TGG | + | chr1.2:1566772-1566791 | MS.gene24209:intron | 30.0% | |
| GATTCATTATCAGACTCAAT+AGG | - | chr1.2:1568285-1568304 | None:intergenic | 30.0% | |
| GTAAGAACATGTCATATCTT+GGG | + | chr1.2:1566583-1566602 | MS.gene24209:CDS | 30.0% | |
| GTTCTAATTGTAGAAATCCA+GGG | + | chr1.2:1568186-1568205 | MS.gene24209:intron | 30.0% | |
| TATCAACTTCACTCAATTTG+CGG | - | chr1.2:1566531-1566550 | None:intergenic | 30.0% | |
| TATCCACTAAAAATGACAAG+GGG | - | chr1.2:1566907-1566926 | None:intergenic | 30.0% | |
| TCAATTAGTATGCAATAAGG+AGG | + | chr1.2:1566321-1566340 | MS.gene24209:CDS | 30.0% | |
| TCCATACTTGTTCTTTCTAT+AGG | - | chr1.2:1566881-1566900 | None:intergenic | 30.0% | |
| TGTAAGAACATGTCATATCT+TGG | + | chr1.2:1566582-1566601 | MS.gene24209:CDS | 30.0% | |
| TGTATATAGTGATACAGATG+AGG | + | chr1.2:1565925-1565944 | MS.gene24209:CDS | 30.0% | |
| TGTTCTAATTGTAGAAATCC+AGG | + | chr1.2:1568185-1568204 | MS.gene24209:intron | 30.0% | |
| TTCTAACACCACACAAAAAA+TGG | - | chr1.2:1567335-1567354 | None:intergenic | 30.0% | |
| ! | ATTTTTCATGTCCAAAGTCA+CGG | - | chr1.2:1568740-1568759 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTGTCATACA+TGG | - | chr1.2:1567025-1567044 | None:intergenic | 30.0% |
| !! | ACATTGATAGTGATACAGAT+GGG | + | chr1.2:1565975-1565994 | MS.gene24209:CDS | 30.0% |
| !! | ATTTTGACCTATCAAACAAC+AGG | + | chr1.2:1567253-1567272 | MS.gene24209:intron | 30.0% |
| !!! | ACGCCTAGAAAACATTTTTT+GGG | + | chr1.2:1566795-1566814 | MS.gene24209:intron | 30.0% |
| !!! | CATATCTTGGGTTTTTTGAT+GGG | + | chr1.2:1566595-1566614 | MS.gene24209:CDS | 30.0% |
| !!! | TCATATCTTGGGTTTTTTGA+TGG | + | chr1.2:1566594-1566613 | MS.gene24209:CDS | 30.0% |
| !!! | TGGAAACATTGTCATTTTCA+AGG | + | chr1.2:1567644-1567663 | MS.gene24209:CDS | 30.0% |
| AAAAGCGGTGATTACTGATA+GGG | + | chr1.2:1567041-1567060 | MS.gene24209:intron | 35.0% | |
| AAATGGACATGACAAGGATA+AGG | + | chr1.2:1568049-1568068 | MS.gene24209:CDS | 35.0% | |
| AAGATAAATAGCCGTCATGA+GGG | + | chr1.2:1568026-1568045 | MS.gene24209:CDS | 35.0% | |
| ACTTCATGGCACAAATAATG+TGG | - | chr1.2:1567779-1567798 | None:intergenic | 35.0% | |
| AGGACTTGGGTTTATCAAAA+AGG | + | chr1.2:1566636-1566655 | MS.gene24209:CDS | 35.0% | |
| AGTGTTAGAATGTGATGAGA+GGG | - | chr1.2:1568895-1568914 | None:intergenic | 35.0% | |
| ATATAGTGATACAGATGAGG+TGG | + | chr1.2:1565928-1565947 | MS.gene24209:CDS | 35.0% | |
| ATCAAATGGACAAAACGCAA+AGG | - | chr1.2:1566499-1566518 | None:intergenic | 35.0% | |
| ATCCATGTTGTCATACTTCA+TGG | - | chr1.2:1567793-1567812 | None:intergenic | 35.0% | |
| ATTTAGTCTGCAACTTGTCA+AGG | - | chr1.2:1567710-1567729 | None:intergenic | 35.0% | |
| CTGAAAAGTTTGAATCTGAG+TGG | + | chr1.2:1567214-1567233 | MS.gene24209:intron | 35.0% | |
| CTTCATGGCACAAATAATGT+GGG | - | chr1.2:1567778-1567797 | None:intergenic | 35.0% | |
| GAGTTGTGTTTCCAAATACA+AGG | + | chr1.2:1567088-1567107 | MS.gene24209:intron | 35.0% | |
| GATGTGAAACGTGATTCTAA+TGG | + | chr1.2:1566283-1566302 | MS.gene24209:CDS | 35.0% | |
| GCAAGGGTTAAAATACAAGA+TGG | + | chr1.2:1566685-1566704 | MS.gene24209:CDS | 35.0% | |
| GCGTCAATTAGTATGCAATA+AGG | + | chr1.2:1566318-1566337 | MS.gene24209:CDS | 35.0% | |
| GTATGACAAACATCCAAAAG+CGG | + | chr1.2:1567026-1567045 | MS.gene24209:intron | 35.0% | |
| GTGGAATTTAACCATGGTAA+TGG | + | chr1.2:1566100-1566119 | MS.gene24209:CDS | 35.0% | |
| TAACACCATACCCAACATTA+TGG | - | chr1.2:1568800-1568819 | None:intergenic | 35.0% | |
| TAAGATAAATAGCCGTCATG+AGG | + | chr1.2:1568025-1568044 | MS.gene24209:CDS | 35.0% | |
| TATCATTACTCATAGACAGC+TGG | - | chr1.2:1568413-1568432 | None:intergenic | 35.0% | |
| TTAGAACAACATCTTGTCCT+CGG | - | chr1.2:1568173-1568192 | None:intergenic | 35.0% | |
| ! | AAAATGACCATGTTTTGTCG+AGG | + | chr1.2:1567906-1567925 | MS.gene24209:CDS | 35.0% |
| ! | AAAGTCTGATTTGCAAGAGA+TGG | + | chr1.2:1567823-1567842 | MS.gene24209:CDS | 35.0% |
| ! | AAATGACCATGTTTTGTCGA+GGG | + | chr1.2:1567907-1567926 | MS.gene24209:CDS | 35.0% |
| ! | AGGTTTGACTATGAGTGTTT+TGG | + | chr1.2:1566832-1566851 | MS.gene24209:intron | 35.0% |
| ! | ATTATCGGTTGAAGAGAATG+TGG | + | chr1.2:1567289-1567308 | MS.gene24209:intron | 35.0% |
| ! | CAAGTTGGAACCATAATGTT+GGG | + | chr1.2:1568787-1568806 | MS.gene24209:CDS | 35.0% |
| ! | CACTCAGATTCAAACTTTTC+AGG | - | chr1.2:1567216-1567235 | None:intergenic | 35.0% |
| ! | CTGCCCAAAAAATGTTTTCT+AGG | - | chr1.2:1566801-1566820 | None:intergenic | 35.0% |
| ! | GTTGATAAACAAGTTGCTAG+TGG | + | chr1.2:1566544-1566563 | MS.gene24209:CDS | 35.0% |
| ! | TAAGAGCGCAAGTGATTATA+AGG | + | chr1.2:1567971-1567990 | MS.gene24209:CDS | 35.0% |
| ! | TTATCGGTTGAAGAGAATGT+GGG | + | chr1.2:1567290-1567309 | MS.gene24209:intron | 35.0% |
| ! | TTTAGTGGATATAACCACCA+TGG | + | chr1.2:1566916-1566935 | MS.gene24209:intron | 35.0% |
| ! | TTTGAGTTACTTCCAAGGTA+AGG | + | chr1.2:1566723-1566742 | MS.gene24209:intron | 35.0% |
| ! | TTTTTCATGTCCAAAGTCAC+GGG | - | chr1.2:1568739-1568758 | None:intergenic | 35.0% |
| !! | AATAAGGAGGGTGTTAATGA+TGG | + | chr1.2:1566334-1566353 | MS.gene24209:CDS | 35.0% |
| !! | ATTATAAGGAGGCTCTAGAA+GGG | + | chr1.2:1567985-1568004 | MS.gene24209:CDS | 35.0% |
| !! | CAAAAATGGTTGTTTCTCCA+TGG | - | chr1.2:1566936-1566955 | None:intergenic | 35.0% |
| !! | CATTGATAGTGATACAGATG+GGG | + | chr1.2:1565976-1565995 | MS.gene24209:CDS | 35.0% |
| !! | GACATTGATAGTGATACAGA+TGG | + | chr1.2:1565974-1565993 | MS.gene24209:CDS | 35.0% |
| !! | TGCTGAAAATTGTGTTGCTT+TGG | + | chr1.2:1568660-1568679 | MS.gene24209:intron | 35.0% |
| !!! | AAACCCCTTGTCATTTTTAG+TGG | + | chr1.2:1566901-1566920 | MS.gene24209:intron | 35.0% |
| !!! | GACGCCTAGAAAACATTTTT+TGG | + | chr1.2:1566794-1566813 | MS.gene24209:intron | 35.0% |
| !!! | GGTTTTTTGATGGGTCAAAA+GGG | + | chr1.2:1566604-1566623 | MS.gene24209:CDS | 35.0% |
| !!! | GTGTTGACTTTTTACTCCTA+CGG | - | chr1.2:1568151-1568170 | None:intergenic | 35.0% |
| !!! | TCAAACTTTTCAGGTGTACA+TGG | - | chr1.2:1567207-1567226 | None:intergenic | 35.0% |
| !!! | TGTTGACTTTTTACTCCTAC+GGG | - | chr1.2:1568150-1568169 | None:intergenic | 35.0% |
| AAACATCGCAGTGACTATTG+TGG | + | chr1.2:1569079-1569098 | MS.gene24209:CDS | 40.0% | |
| AACAACGATGTTCGTACTGA+TGG | + | chr1.2:1566064-1566083 | MS.gene24209:CDS | 40.0% | |
| AACGCAAAGGAGCTAATTCA+TGG | - | chr1.2:1566486-1566505 | None:intergenic | 40.0% | |
| AATGGTGTTTGCAATGAGCA+AGG | + | chr1.2:1566118-1566137 | MS.gene24209:CDS | 40.0% | |
| ACATAGACTATTGAACGCAG+CGG | - | chr1.2:1567940-1567959 | None:intergenic | 40.0% | |
| ACGACTTTGTTCGTACGATT+TGG | + | chr1.2:1566431-1566450 | MS.gene24209:CDS | 40.0% | |
| AGAACGACATCAATCTGTGA+AGG | + | chr1.2:1567351-1567370 | MS.gene24209:intron | 40.0% | |
| AGATGTCAAAAAGGCGATAG+AGG | + | chr1.2:1567578-1567597 | MS.gene24209:CDS | 40.0% | |
| AGCTAATTCATGGTTGTGAG+AGG | - | chr1.2:1566476-1566495 | None:intergenic | 40.0% | |
| AGTTTGAATCTGAGTGGAAG+AGG | + | chr1.2:1567220-1567239 | MS.gene24209:intron | 40.0% | |
| ATACTCACCGGTGTATAACT+CGG | - | chr1.2:1568945-1568964 | None:intergenic | 40.0% | |
| ATGGTGTTTGCAATGAGCAA+GGG | + | chr1.2:1566119-1566138 | MS.gene24209:CDS | 40.0% | |
| CAAAAGCGGTGATTACTGAT+AGG | + | chr1.2:1567040-1567059 | MS.gene24209:intron | 40.0% | |
| CAAGGGAAAGAGAACTTTGA+TGG | + | chr1.2:1566136-1566155 | MS.gene24209:CDS | 40.0% | |
| CAATGTTCCGAGTTATACAC+CGG | + | chr1.2:1568935-1568954 | MS.gene24209:CDS | 40.0% | |
| CACTGGTATTACACGTAAGA+GGG | + | chr1.2:1568491-1568510 | MS.gene24209:CDS | 40.0% | |
| CAGTGTTAGAATGTGATGAG+AGG | - | chr1.2:1568896-1568915 | None:intergenic | 40.0% | |
| CATTGAACGAGATGAAGATG+AGG | + | chr1.2:1567620-1567639 | MS.gene24209:CDS | 40.0% | |
| CATTGCAAACACCATTACCA+TGG | - | chr1.2:1566114-1566133 | None:intergenic | 40.0% | |
| CGCAGAACAATTAGTTCGAA+TGG | - | chr1.2:1566395-1566414 | None:intergenic | 40.0% | |
| CTCTTGCAAATCAGACTTTC+AGG | - | chr1.2:1567822-1567841 | None:intergenic | 40.0% | |
| GCACAAATAATGTGGGAACA+TGG | - | chr1.2:1567771-1567790 | None:intergenic | 40.0% | |
| GCTAATTCATGGTTGTGAGA+GGG | - | chr1.2:1566475-1566494 | None:intergenic | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | + | chr1.2:1566198-1566217 | MS.gene24209:CDS | 40.0% | |
| GTTTGAATCTGAGTGGAAGA+GGG | + | chr1.2:1567221-1567240 | MS.gene24209:intron | 40.0% | |
| TATCAGTATCAGCCTTACCT+TGG | - | chr1.2:1566738-1566757 | None:intergenic | 40.0% | |
| TATGAGTGCGTTGAAGAATG+TGG | + | chr1.2:1569045-1569064 | MS.gene24209:CDS | 40.0% | |
| TATGGTTCCAACTTGCACAA+TGG | - | chr1.2:1568782-1568801 | None:intergenic | 40.0% | |
| TCACTCAATTTGCGGTAAGT+AGG | - | chr1.2:1566523-1566542 | None:intergenic | 40.0% | |
| TGACCTATCAAACAACAGGT+GGG | + | chr1.2:1567257-1567276 | MS.gene24209:intron | 40.0% | |
| TGATAAACCCAAGTCCTTCA+TGG | - | chr1.2:1566633-1566652 | None:intergenic | 40.0% | |
| TGCCATGAAGTATGACAACA+TGG | + | chr1.2:1567788-1567807 | MS.gene24209:CDS | 40.0% | |
| TGGAACCATAATGTTGGGTA+TGG | + | chr1.2:1568792-1568811 | MS.gene24209:CDS | 40.0% | |
| TTCATCATTACCTTCTTGGG+AGG | - | chr1.2:1567886-1567905 | None:intergenic | 40.0% | |
| TTCGAATGGTTAGCGTAGAT+CGG | - | chr1.2:1566381-1566400 | None:intergenic | 40.0% | |
| TTGACCTATCAAACAACAGG+TGG | + | chr1.2:1567256-1567275 | MS.gene24209:intron | 40.0% | |
| TTTGGGCAGATTCTACTAGT+AGG | + | chr1.2:1566812-1566831 | MS.gene24209:intron | 40.0% | |
| ! | AATGACCATGTTTTGTCGAG+GGG | + | chr1.2:1567908-1567927 | MS.gene24209:CDS | 40.0% |
| ! | CTATCAGTAATCACCGCTTT+TGG | - | chr1.2:1567042-1567061 | None:intergenic | 40.0% |
| ! | GCAAGTTGGAACCATAATGT+TGG | + | chr1.2:1568786-1568805 | MS.gene24209:CDS | 40.0% |
| ! | GCTACTTTGAGTTACTTCCA+AGG | + | chr1.2:1566718-1566737 | MS.gene24209:CDS | 40.0% |
| ! | TTACCCACCTGTTGTTTGAT+AGG | - | chr1.2:1567263-1567282 | None:intergenic | 40.0% |
| !! | AAATGGTTGTTTCTCCATGG+TGG | - | chr1.2:1566933-1566952 | None:intergenic | 40.0% |
| !! | GATTATAAGGAGGCTCTAGA+AGG | + | chr1.2:1567984-1568003 | MS.gene24209:CDS | 40.0% |
| !! | TTTTTGATGGGTCAAAAGGG+TGG | + | chr1.2:1566607-1566626 | MS.gene24209:CDS | 40.0% |
| !!! | ATGCGAGACCATTTTTTGTG+TGG | + | chr1.2:1567324-1567343 | MS.gene24209:intron | 40.0% |
| !!! | CCACAAGGCTATTTTTGTGT+CGG | - | chr1.2:1567404-1567423 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTGATGGGTCAAA+AGG | + | chr1.2:1566603-1566622 | MS.gene24209:CDS | 40.0% |
| AAGACAGCCATTGTGCAAGT+TGG | + | chr1.2:1568772-1568791 | MS.gene24209:CDS | 45.0% | |
| AATAGCCGTCATGAGGGAAA+TGG | + | chr1.2:1568032-1568051 | MS.gene24209:CDS | 45.0% | |
| ACACCAATTCCAGCAAGTTC+TGG | - | chr1.2:1568230-1568249 | None:intergenic | 45.0% | |
| AGCATTTCGATGCAAATGCC+AGG | - | chr1.2:1567127-1567146 | None:intergenic | 45.0% | |
| ATTTCACGGATCATCAGGCA+AGG | + | chr1.2:1566668-1566687 | MS.gene24209:CDS | 45.0% | |
| CAAAGGCGATGCCTTGTATT+TGG | - | chr1.2:1567102-1567121 | None:intergenic | 45.0% | |
| CACTCTGTAGCAGTGTCAAA+TGG | + | chr1.2:1568447-1568466 | MS.gene24209:CDS | 45.0% | |
| CATGTCCATTTCCCTCATGA+CGG | - | chr1.2:1568040-1568059 | None:intergenic | 45.0% | |
| CATTTGACACTGCTACAGAG+TGG | - | chr1.2:1568449-1568468 | None:intergenic | 45.0% | |
| CCTTTCTTACTTCAAACCCG+TGG | - | chr1.2:1566261-1566280 | None:intergenic | 45.0% | |
| CCTTTGACATTCACCATCAG+TGG | - | chr1.2:1568125-1568144 | None:intergenic | 45.0% | |
| GAAATCCAGGGCACACAATA+CGG | + | chr1.2:1568198-1568217 | MS.gene24209:intron | 45.0% | |
| GAACGAGATGAAGATGAGGA+TGG | + | chr1.2:1567624-1567643 | MS.gene24209:CDS | 45.0% | |
| GACGGTGTGGAATTTAACCA+TGG | + | chr1.2:1566094-1566113 | MS.gene24209:CDS | 45.0% | |
| GAGCGCAAGTGATTATAAGG+AGG | + | chr1.2:1567974-1567993 | MS.gene24209:CDS | 45.0% | |
| GGAGTAAAAAGTCAACACCG+AGG | + | chr1.2:1568153-1568172 | MS.gene24209:intron | 45.0% | |
| GTCAATGCAGTTGTCAGCAT+AGG | - | chr1.2:1567510-1567529 | None:intergenic | 45.0% | |
| GTGTCGTGTCTGAAGATCAA+GGG | + | chr1.2:1568246-1568265 | MS.gene24209:CDS | 45.0% | |
| TCTAACACTGCTCTGCATAC+TGG | + | chr1.2:1568906-1568925 | MS.gene24209:CDS | 45.0% | |
| TCTGTAGCAGTGTCAAATGG+TGG | + | chr1.2:1568450-1568469 | MS.gene24209:CDS | 45.0% | |
| TGAGGGAAATGGACATGACA+AGG | + | chr1.2:1568043-1568062 | MS.gene24209:CDS | 45.0% | |
| TGCGGTAAGTAGGCATCAAA+TGG | - | chr1.2:1566513-1566532 | None:intergenic | 45.0% | |
| TGTCGTGTCTGAAGATCAAG+GGG | + | chr1.2:1568247-1568266 | MS.gene24209:CDS | 45.0% | |
| TGTGATGAGAGGGTAGTTGT+CGG | - | chr1.2:1568885-1568904 | None:intergenic | 45.0% | |
| TGTTGCGAATGATCCACTGA+TGG | + | chr1.2:1568109-1568128 | MS.gene24209:CDS | 45.0% | |
| TTTCACGGATCATCAGGCAA+GGG | + | chr1.2:1566669-1566688 | MS.gene24209:CDS | 45.0% | |
| ! | CACTATGGGGTGCCAAATAA+TGG | + | chr1.2:1568834-1568853 | MS.gene24209:CDS | 45.0% |
| ! | CCACGGGTTTGAAGTAAGAA+AGG | + | chr1.2:1566258-1566277 | MS.gene24209:CDS | 45.0% |
| ! | CCACTGATGGTGAATGTCAA+AGG | + | chr1.2:1568122-1568141 | MS.gene24209:intron | 45.0% |
| ! | CCGACACAAAAATAGCCTTG+TGG | + | chr1.2:1567401-1567420 | MS.gene24209:intron | 45.0% |
| ! | CGAGAAGTTGAGAAAAGCAC+TGG | + | chr1.2:1568474-1568493 | MS.gene24209:CDS | 45.0% |
| ! | GCACTGGTATTACACGTAAG+AGG | + | chr1.2:1568490-1568509 | MS.gene24209:CDS | 45.0% |
| ! | TATGGGGTGCCAAATAATGG+TGG | + | chr1.2:1568837-1568856 | MS.gene24209:CDS | 45.0% |
| ! | TGATAGTGATACAGATGGGG+TGG | + | chr1.2:1565979-1565998 | MS.gene24209:CDS | 45.0% |
| !! | TGTCCAGAACTTGCTGGAAT+TGG | + | chr1.2:1568224-1568243 | MS.gene24209:CDS | 45.0% |
| AAGTGCCCCTCGACAAAACA+TGG | - | chr1.2:1567916-1567935 | None:intergenic | 50.0% | |
| AATGGTGTGACCCGTGACTT+TGG | + | chr1.2:1568726-1568745 | MS.gene24209:CDS | 50.0% | |
| ATGAGAGGGTAGTTGTCGGA+GGG | - | chr1.2:1568881-1568900 | None:intergenic | 50.0% | |
| GCTAGTGGTCTACATTCGCA+AGG | + | chr1.2:1566559-1566578 | MS.gene24209:CDS | 50.0% | |
| GTAGTTGTCGGAGGGAATTG+TGG | - | chr1.2:1568873-1568892 | None:intergenic | 50.0% | |
| GTCGTGTCTGAAGATCAAGG+GGG | + | chr1.2:1568248-1568267 | MS.gene24209:CDS | 50.0% | |
| TCGTCATTTGCCTCCCAAGA+AGG | + | chr1.2:1567873-1567892 | MS.gene24209:CDS | 50.0% | |
| TCTGAAGATCAAGGGGGAGA+AGG | + | chr1.2:1568254-1568273 | MS.gene24209:CDS | 50.0% | |
| ! | CGTACTGATGGAGATGCAGA+CGG | + | chr1.2:1566076-1566095 | MS.gene24209:CDS | 50.0% |
| ! | GGTGTCGTGTCTGAAGATCA+AGG | + | chr1.2:1568245-1568264 | MS.gene24209:CDS | 50.0% |
| ! | TGTAGACGCTTTGAACGCAG+AGG | + | chr1.2:1567741-1567760 | MS.gene24209:CDS | 50.0% |
| !! | TGAATGTCAAAGGTGCCCGT+AGG | + | chr1.2:1568132-1568151 | MS.gene24209:intron | 50.0% |
| AAGGGTGGCCATGAAGGACT+TGG | + | chr1.2:1566622-1566641 | MS.gene24209:CDS | 55.0% | |
| AGGGTGGCCATGAAGGACTT+GGG | + | chr1.2:1566623-1566642 | MS.gene24209:CDS | 55.0% | |
| GATGAGAGGGTAGTTGTCGG+AGG | - | chr1.2:1568882-1568901 | None:intergenic | 55.0% | |
| GATGCAAATGCCAGGCGCAA+AGG | - | chr1.2:1567119-1567138 | None:intergenic | 55.0% | |
| GGTCAAAAGGGTGGCCATGA+AGG | + | chr1.2:1566616-1566635 | MS.gene24209:CDS | 55.0% | |
| TGATGGAGATGCAGACGGTG+TGG | + | chr1.2:1566081-1566100 | MS.gene24209:CDS | 55.0% | |
| CACGTCCGTATTGTGTGCCC+TGG | - | chr1.2:1568206-1568225 | None:intergenic | 60.0% | |
| CGGACGTGTCCAGAACTTGC+TGG | + | chr1.2:1568218-1568237 | MS.gene24209:CDS | 60.0% | |
| !! | CAAGGCATCGCCTTTGCGCC+TGG | + | chr1.2:1567106-1567125 | MS.gene24209:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 1565890 | 1569114 | 1565890 | ID=MS.gene24209 |
| chr1.2 | mRNA | 1565890 | 1569114 | 1565890 | ID=MS.gene24209.t1;Parent=MS.gene24209 |
| chr1.2 | exon | 1565890 | 1566739 | 1565890 | ID=MS.gene24209.t1.exon1;Parent=MS.gene24209.t1 |
| chr1.2 | CDS | 1565890 | 1566739 | 1565890 | ID=cds.MS.gene24209.t1;Parent=MS.gene24209.t1 |
| chr1.2 | exon | 1567547 | 1568130 | 1567547 | ID=MS.gene24209.t1.exon2;Parent=MS.gene24209.t1 |
| chr1.2 | CDS | 1567547 | 1568130 | 1567547 | ID=cds.MS.gene24209.t1;Parent=MS.gene24209.t1 |
| chr1.2 | exon | 1568207 | 1568317 | 1568207 | ID=MS.gene24209.t1.exon3;Parent=MS.gene24209.t1 |
| chr1.2 | CDS | 1568207 | 1568317 | 1568207 | ID=cds.MS.gene24209.t1;Parent=MS.gene24209.t1 |
| chr1.2 | exon | 1568414 | 1568635 | 1568414 | ID=MS.gene24209.t1.exon4;Parent=MS.gene24209.t1 |
| chr1.2 | CDS | 1568414 | 1568635 | 1568414 | ID=cds.MS.gene24209.t1;Parent=MS.gene24209.t1 |
| chr1.2 | exon | 1568726 | 1568956 | 1568726 | ID=MS.gene24209.t1.exon5;Parent=MS.gene24209.t1 |
| chr1.2 | CDS | 1568726 | 1568956 | 1568726 | ID=cds.MS.gene24209.t1;Parent=MS.gene24209.t1 |
| chr1.2 | exon | 1569043 | 1569114 | 1569043 | ID=MS.gene24209.t1.exon6;Parent=MS.gene24209.t1 |
| chr1.2 | CDS | 1569043 | 1569114 | 1569043 | ID=cds.MS.gene24209.t1;Parent=MS.gene24209.t1 |
| Gene Sequence |
| Protein sequence |
