Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24322.t1 | XP_013466041.1 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 3.40E-281 | 976.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24322.t1 | P0C7Q8 | 56.7 | 533 | 164 | 7 | 1 | 468 | 1 | 531 | 5.9e-165 | 582.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24322.t1 | A0A072VE38 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 2.5e-281 | 976.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene24322.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24322.t1 | MTR_1g021835 | 99.360 | 469 | 3 | 0 | 1 | 469 | 1 | 469 | 0.0 | 981 |
| MS.gene24322.t1 | MTR_1g021835 | 99.454 | 366 | 2 | 0 | 1 | 366 | 1 | 366 | 0.0 | 772 |
| MS.gene24322.t1 | MTR_1g021835 | 99.674 | 307 | 1 | 0 | 1 | 307 | 1 | 307 | 0.0 | 649 |
| MS.gene24322.t1 | MTR_5g018900 | 59.351 | 524 | 157 | 6 | 1 | 468 | 1 | 524 | 0.0 | 618 |
| MS.gene24322.t1 | MTR_8g078410 | 58.192 | 531 | 159 | 9 | 1 | 468 | 1 | 531 | 0.0 | 577 |
| MS.gene24322.t1 | MTR_5g081160 | 52.301 | 478 | 212 | 7 | 1 | 468 | 32 | 503 | 1.46e-172 | 494 |
| MS.gene24322.t1 | MTR_3g069410 | 51.313 | 495 | 201 | 12 | 1 | 468 | 31 | 512 | 1.74e-161 | 466 |
| MS.gene24322.t1 | MTR_5g018910 | 56.818 | 88 | 38 | 0 | 106 | 193 | 493 | 580 | 1.43e-31 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24322.t1 | AT1G19270 | 60.600 | 533 | 143 | 9 | 1 | 468 | 1 | 531 | 0.0 | 617 |
| MS.gene24322.t1 | AT1G19270 | 60.600 | 533 | 143 | 9 | 1 | 468 | 1 | 531 | 0.0 | 617 |
| MS.gene24322.t1 | AT4G36860 | 63.908 | 435 | 142 | 6 | 43 | 468 | 149 | 577 | 0.0 | 561 |
| MS.gene24322.t1 | AT4G36860 | 63.908 | 435 | 142 | 6 | 43 | 468 | 125 | 553 | 0.0 | 561 |
| MS.gene24322.t1 | AT2G39830 | 52.965 | 489 | 199 | 9 | 1 | 468 | 49 | 527 | 6.19e-172 | 494 |
| MS.gene24322.t1 | AT2G39830 | 53.125 | 480 | 203 | 7 | 1 | 468 | 49 | 518 | 3.08e-171 | 492 |
| MS.gene24322.t1 | AT2G39830 | 52.642 | 492 | 199 | 10 | 1 | 468 | 49 | 530 | 1.19e-169 | 488 |
| MS.gene24322.t1 | AT4G36860 | 64.329 | 328 | 108 | 4 | 43 | 365 | 125 | 448 | 1.06e-154 | 447 |
| MS.gene24322.t1 | AT2G39830 | 51.444 | 381 | 159 | 8 | 1 | 365 | 49 | 419 | 3.34e-130 | 384 |
| MS.gene24322.t1 | AT5G66610 | 46.556 | 421 | 202 | 8 | 54 | 462 | 15 | 424 | 3.50e-115 | 345 |
| MS.gene24322.t1 | AT5G66610 | 45.824 | 443 | 218 | 9 | 35 | 462 | 116 | 551 | 6.20e-115 | 349 |
| MS.gene24322.t1 | AT5G66620 | 45.755 | 424 | 200 | 9 | 54 | 461 | 231 | 640 | 7.01e-115 | 352 |
| MS.gene24322.t1 | AT5G66620 | 45.755 | 424 | 200 | 9 | 54 | 461 | 222 | 631 | 7.82e-115 | 351 |
| MS.gene24322.t1 | AT5G66620 | 45.755 | 424 | 200 | 9 | 54 | 461 | 222 | 631 | 7.82e-115 | 351 |
| MS.gene24322.t1 | AT5G66610 | 43.404 | 470 | 217 | 10 | 35 | 462 | 116 | 578 | 1.22e-109 | 337 |
| MS.gene24322.t1 | AT5G66630 | 46.995 | 366 | 167 | 10 | 110 | 461 | 346 | 698 | 2.45e-98 | 310 |
| MS.gene24322.t1 | AT5G17890 | 47.439 | 371 | 180 | 8 | 111 | 468 | 1240 | 1608 | 4.19e-95 | 315 |
| MS.gene24322.t1 | AT5G66640 | 39.286 | 448 | 229 | 12 | 39 | 461 | 9 | 438 | 2.60e-94 | 293 |
| MS.gene24322.t1 | AT5G66640 | 39.286 | 448 | 229 | 12 | 39 | 461 | 9 | 438 | 2.60e-94 | 293 |
| MS.gene24322.t1 | AT5G66640 | 39.286 | 448 | 230 | 12 | 39 | 461 | 40 | 470 | 6.35e-94 | 293 |
| MS.gene24322.t1 | AT5G66640 | 39.286 | 448 | 229 | 12 | 39 | 461 | 40 | 469 | 7.91e-94 | 292 |
| MS.gene24322.t1 | AT5G66640 | 45.820 | 323 | 155 | 6 | 158 | 461 | 10 | 331 | 3.33e-90 | 278 |
| MS.gene24322.t1 | AT5G66640 | 35.714 | 448 | 242 | 13 | 39 | 461 | 40 | 466 | 1.09e-77 | 250 |
| MS.gene24322.t1 | AT5G66640 | 35.714 | 448 | 241 | 13 | 39 | 461 | 40 | 465 | 2.06e-77 | 249 |
| MS.gene24322.t1 | AT5G66620 | 42.491 | 273 | 136 | 7 | 54 | 319 | 222 | 480 | 1.62e-66 | 222 |
Find 122 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCTTATAGCATGCTTTA+TGG | 0.147926 | 1.1:+2602520 | None:intergenic |
| GGAGATATCTATACTTAATA+TGG | 0.171031 | 1.1:+2599631 | None:intergenic |
| TCAGACATTTCCCCTGTTTA+TGG | 0.175438 | 1.1:-2599739 | MS.gene24322:CDS |
| AGAGCTTCCTTCCATCCTTA+TGG | 0.265230 | 1.1:+2601692 | None:intergenic |
| CATGTTATCATTTCCATGTT+TGG | 0.271952 | 1.1:+2604541 | None:intergenic |
| TATTACTTGCCATCAACTTC+AGG | 0.279065 | 1.1:-2605485 | MS.gene24322:CDS |
| AGAAGGTATTTGTCAGGTTT+TGG | 0.289094 | 1.1:-2599911 | MS.gene24322:CDS |
| AATATAGGGCACACCCATTC+TGG | 0.293148 | 1.1:-2601923 | MS.gene24322:CDS |
| ATGTTATCATTTCCATGTTT+GGG | 0.306036 | 1.1:+2604542 | None:intergenic |
| AATAGAAGAAAGTCTAAATT+TGG | 0.307251 | 1.1:-2604573 | MS.gene24322:CDS |
| TAAATTGCTTGGGTGCATTC+TGG | 0.307599 | 1.1:-2602739 | MS.gene24322:CDS |
| TCAGCAAGTTCCTCTACTTT+TGG | 0.312173 | 1.1:-2601569 | MS.gene24322:CDS |
| CTGCTGGTCTTATTGAATAT+AGG | 0.329484 | 1.1:-2601938 | MS.gene24322:CDS |
| TGCTGGTCTTATTGAATATA+GGG | 0.342259 | 1.1:-2601937 | MS.gene24322:CDS |
| CTAAACCCATCTCCATAAAC+AGG | 0.350411 | 1.1:+2599727 | None:intergenic |
| GCACGGCAACGGAAGCATTC+AGG | 0.350540 | 1.1:+2602713 | None:intergenic |
| CATGCATGGCTGCGGCTAAC+AGG | 0.360998 | 1.1:-2600155 | MS.gene24322:intron |
| CTTCTTCTAATTGTGATTTG+TGG | 0.366104 | 1.1:+2604615 | None:intergenic |
| TTCGCAAGTATGGCCTAAAA+AGG | 0.367908 | 1.1:-2599687 | MS.gene24322:CDS |
| TTTCCATAAAGCATGCTATA+AGG | 0.370626 | 1.1:-2602523 | MS.gene24322:CDS |
| TTCTTTCACAGATTACTTAC+CGG | 0.370788 | 1.1:-2600203 | MS.gene24322:intron |
| GAGCTTCCTTCCATCCTTAT+GGG | 0.381406 | 1.1:+2601693 | None:intergenic |
| AACTACCCGTCACCTTGATA+TGG | 0.383599 | 1.1:+2599656 | None:intergenic |
| CTCTGAGAGGCAGAGTCCTC+TGG | 0.389800 | 1.1:+2601111 | None:intergenic |
| ACTGCAATTCTCATTCTATA+CGG | 0.407169 | 1.1:-2600756 | MS.gene24322:CDS |
| CTATTTCCTGTGCCGAGTCT+AGG | 0.412169 | 1.1:+2600825 | None:intergenic |
| TGGCCGCTATCTAAATTGCT+TGG | 0.419143 | 1.1:-2602750 | MS.gene24322:CDS |
| TAGACTTTCTTCTATTGCTC+TGG | 0.423924 | 1.1:+2604580 | None:intergenic |
| ATTTCCCCTGTTTATGGAGA+TGG | 0.425346 | 1.1:-2599733 | MS.gene24322:CDS |
| TCGTGCTATTGCGTTGTCTT+TGG | 0.426970 | 1.1:-2605309 | MS.gene24322:CDS |
| TGCACCTCATAATCAGAGAT+TGG | 0.431937 | 1.1:+2602680 | None:intergenic |
| ATAAGACCAGCAGGGTTTGT+TGG | 0.433014 | 1.1:+2601948 | None:intergenic |
| GGCCGCTATCTAAATTGCTT+GGG | 0.433359 | 1.1:-2602749 | MS.gene24322:CDS |
| TGCTTGCAGACATCACATTT+CGG | 0.436101 | 1.1:+2602489 | None:intergenic |
| ACAAGTACCCCTGAAGTTGA+TGG | 0.439731 | 1.1:+2605476 | None:intergenic |
| CAGCGCGCAGTCAGTTTGTA+TGG | 0.443392 | 1.1:+2600786 | None:intergenic |
| TTTCCCCTGTTTATGGAGAT+GGG | 0.444481 | 1.1:-2599732 | MS.gene24322:CDS |
| TCCCCAAGCTTCTTCTCAAA+AGG | 0.447372 | 1.1:+2599784 | None:intergenic |
| CCTACCAATCTCTGATTATG+AGG | 0.447976 | 1.1:-2602684 | MS.gene24322:intron |
| AGGCAGAGTCCTCTGGTCTC+AGG | 0.449022 | 1.1:+2601118 | None:intergenic |
| TGTTGAAGAAGGTATTTGTC+AGG | 0.458972 | 1.1:-2599917 | MS.gene24322:CDS |
| CCCATCGGGAAATACTGAAT+TGG | 0.458973 | 1.1:+2604512 | None:intergenic |
| TGCAATACTGAGATTGGTTA+TGG | 0.459883 | 1.1:-2602770 | MS.gene24322:CDS |
| CACTGAATGAAGCGAGGGAG+GGG | 0.460388 | 1.1:-2601534 | MS.gene24322:CDS |
| ATTACTTGCCATCAACTTCA+GGG | 0.464482 | 1.1:-2605484 | MS.gene24322:CDS |
| GTGTCTCGATTCTGCTATCA+TGG | 0.464850 | 1.1:-2601662 | MS.gene24322:CDS |
| TATAGCATGCTTTATGGAAA+GGG | 0.466425 | 1.1:+2602526 | None:intergenic |
| AGTATTTCCCGATGGGGTAC+AGG | 0.482157 | 1.1:-2604505 | MS.gene24322:intron |
| AATAATGCTGGTTCCAGAAT+GGG | 0.483891 | 1.1:+2601910 | None:intergenic |
| CAATAATGCTGGTTCCAGAA+TGG | 0.490304 | 1.1:+2601909 | None:intergenic |
| TTATAGCATGCTTTATGGAA+AGG | 0.491264 | 1.1:+2602525 | None:intergenic |
| GACGGGATATATTGCCCATA+AGG | 0.491327 | 1.1:-2601707 | MS.gene24322:CDS |
| ACTCATACCTGTACCCCATC+GGG | 0.492801 | 1.1:+2604498 | None:intergenic |
| GGGAAATGTCTGATTCAATC+TGG | 0.498038 | 1.1:+2599749 | None:intergenic |
| GAGATATCTATACTTAATAT+GGG | 0.506138 | 1.1:+2599632 | None:intergenic |
| CTATATTCAATAAGACCAGC+AGG | 0.514177 | 1.1:+2601939 | None:intergenic |
| TCTGAGCTTTCTTCTGCACC+AGG | 0.519475 | 1.1:-2599871 | MS.gene24322:CDS |
| TTACATAATAGGATATGTGC+TGG | 0.519801 | 1.1:-2602794 | MS.gene24322:intron |
| AACTCATACCTGTACCCCAT+CGG | 0.520543 | 1.1:+2604497 | None:intergenic |
| CCAATTCAGTATTTCCCGAT+GGG | 0.521103 | 1.1:-2604512 | MS.gene24322:CDS |
| CTTCAGTATATCAGCATGAA+GGG | 0.521307 | 1.1:+2601621 | None:intergenic |
| GGATATATTGCCCATAAGGA+TGG | 0.523228 | 1.1:-2601703 | MS.gene24322:CDS |
| TGGTCTCAGGCATATGATAG+TGG | 0.523864 | 1.1:+2601131 | None:intergenic |
| CTCATGAGCTAGAATCGATC+CGG | 0.532124 | 1.1:+2600184 | None:intergenic |
| GCACTGAATGAAGCGAGGGA+GGG | 0.533144 | 1.1:-2601535 | MS.gene24322:CDS |
| ACTTCAGTATATCAGCATGA+AGG | 0.540309 | 1.1:+2601620 | None:intergenic |
| CTAAGTCAAGATGTTGAAGA+AGG | 0.540521 | 1.1:-2599928 | MS.gene24322:CDS |
| CCTCATAATCAGAGATTGGT+AGG | 0.540834 | 1.1:+2602684 | None:intergenic |
| GCTGGCTGCAATACTGAGAT+TGG | 0.548263 | 1.1:-2602776 | MS.gene24322:CDS |
| TACATGCAGCCACAAGGGAC+GGG | 0.551584 | 1.1:-2601724 | MS.gene24322:intron |
| TATGGAGATGGGTTTAGAGC+CGG | 0.552548 | 1.1:-2599721 | MS.gene24322:CDS |
| AAGGACCCTTCACCATATCA+AGG | 0.556806 | 1.1:-2599668 | MS.gene24322:CDS |
| ACCAATTCAGTATTTCCCGA+TGG | 0.560239 | 1.1:-2604513 | MS.gene24322:CDS |
| CTCATGAGATGATGCATGCA+TGG | 0.562277 | 1.1:-2600169 | MS.gene24322:CDS |
| GCTGATGAAAAGTTGCTGCC+TGG | 0.562692 | 1.1:+2599853 | None:intergenic |
| CAGATTCCAACAAACCCTGC+TGG | 0.563194 | 1.1:-2601954 | MS.gene24322:CDS |
| GCAATATATCCCGTCCCTTG+TGG | 0.568174 | 1.1:+2601715 | None:intergenic |
| CATGTGAAGGGCAATAATGC+TGG | 0.569427 | 1.1:+2601898 | None:intergenic |
| GTAGGTTGCAAGCACGGCAA+CGG | 0.571499 | 1.1:+2602702 | None:intergenic |
| GTGTTATCATGTTCATGTGA+AGG | 0.573567 | 1.1:+2601885 | None:intergenic |
| TCATTCTATACGGTCTTCCA+AGG | 0.573571 | 1.1:-2600746 | MS.gene24322:intron |
| TTACATGCAGCCACAAGGGA+CGG | 0.574092 | 1.1:-2601725 | MS.gene24322:intron |
| GCATCATATACATCTAAGAC+AGG | 0.574513 | 1.1:-2599817 | MS.gene24322:CDS |
| TCGCTCACAGCTACAACAGC+GGG | 0.574792 | 1.1:+2601860 | None:intergenic |
| TCTGATCATAAGGTTTCTGA+AGG | 0.579206 | 1.1:-2605533 | MS.gene24322:CDS |
| CCGTCACCTTGATATGGTGA+AGG | 0.582188 | 1.1:+2599662 | None:intergenic |
| TTGGAGTCACCTCCCAAACA+TGG | 0.583689 | 1.1:-2604554 | MS.gene24322:CDS |
| CTGTTGTAGCTGTGAGCGAA+TGG | 0.584516 | 1.1:-2601856 | MS.gene24322:CDS |
| TGCAGACATCACATTTCGGA+TGG | 0.584761 | 1.1:+2602493 | None:intergenic |
| TTCGCTCACAGCTACAACAG+CGG | 0.587961 | 1.1:+2601859 | None:intergenic |
| TGTCTTTCAACCAAAAGTAG+AGG | 0.588772 | 1.1:+2601559 | None:intergenic |
| ACTGAATGAAGCGAGGGAGG+GGG | 0.590431 | 1.1:-2601533 | MS.gene24322:CDS |
| TCTCTTTACATGCAGCCACA+AGG | 0.590442 | 1.1:-2601730 | MS.gene24322:intron |
| AGCACTGAATGAAGCGAGGG+AGG | 0.591672 | 1.1:-2601536 | MS.gene24322:CDS |
| TGTTATCATGTTCATGTGAA+GGG | 0.592374 | 1.1:+2601886 | None:intergenic |
| TTATCATTTCCATGTTTGGG+AGG | 0.593608 | 1.1:+2604545 | None:intergenic |
| CTTCACCATATCAAGGTGAC+GGG | 0.594001 | 1.1:-2599661 | MS.gene24322:CDS |
| ATATTGCCCATAAGGATGGA+AGG | 0.594506 | 1.1:-2601699 | MS.gene24322:CDS |
| CGTCACCTTGATATGGTGAA+GGG | 0.595573 | 1.1:+2599663 | None:intergenic |
| CCAAGCTTCTTCTCAAAAGG+AGG | 0.596754 | 1.1:+2599787 | None:intergenic |
| AGATGATGCATGCATGGCTG+CGG | 0.598462 | 1.1:-2600163 | MS.gene24322:CDS |
| TTACTTGCCATCAACTTCAG+GGG | 0.600696 | 1.1:-2605483 | MS.gene24322:intron |
| CCTTCACCATATCAAGGTGA+CGG | 0.608624 | 1.1:-2599662 | MS.gene24322:CDS |
| AGATTGGTAGGTTGCAAGCA+CGG | 0.611730 | 1.1:+2602696 | None:intergenic |
| CTCTTTACATGCAGCCACAA+GGG | 0.615445 | 1.1:-2601729 | MS.gene24322:intron |
| CACCCAAGCAATTTAGATAG+CGG | 0.630015 | 1.1:+2602747 | None:intergenic |
| AGAAGACCTAGACTCGGCAC+AGG | 0.630642 | 1.1:-2600831 | MS.gene24322:CDS |
| ATATGATGCAGATGAGGATG+AGG | 0.632065 | 1.1:+2599831 | None:intergenic |
| GACAAGCACTGAATGAAGCG+AGG | 0.639156 | 1.1:-2601540 | MS.gene24322:CDS |
| ACAAGCACTGAATGAAGCGA+GGG | 0.649587 | 1.1:-2601539 | MS.gene24322:CDS |
| TAAACCCATCTCCATAAACA+GGG | 0.651389 | 1.1:+2599728 | None:intergenic |
| TTCAGTATATCAGCATGAAG+GGG | 0.658616 | 1.1:+2601622 | None:intergenic |
| AGATGTATATGATGCAGATG+AGG | 0.664075 | 1.1:+2599825 | None:intergenic |
| CAATTCAGTATTTCCCGATG+GGG | 0.664407 | 1.1:-2604511 | MS.gene24322:CDS |
| TTGTAGCTGTGAGCGAATGG+AGG | 0.666039 | 1.1:-2601853 | MS.gene24322:intron |
| CAGAGGACTCTGCCTCTCAG+AGG | 0.667518 | 1.1:-2601110 | MS.gene24322:CDS |
| GAAAGGGTAATTTCCAGACG+TGG | 0.673323 | 1.1:+2602542 | None:intergenic |
| CAGTGCTGAGTTCCTCTGAG+AGG | 0.678909 | 1.1:+2601098 | None:intergenic |
| TATCATATGCCTGAGACCAG+AGG | 0.682286 | 1.1:-2601127 | MS.gene24322:CDS |
| TATATTCAATAAGACCAGCA+GGG | 0.688376 | 1.1:+2601940 | None:intergenic |
| CTGATCATAAGGTTTCTGAA+GGG | 0.689401 | 1.1:-2605532 | MS.gene24322:CDS |
| AAACCCATCTCCATAAACAG+GGG | 0.693477 | 1.1:+2599729 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAATTATTTACATAAT+AGG | - | chr1.1:2602403-2602422 | MS.gene24322:intron | 10.0% |
| !! | AATTAATAATTTGATTGTAA+CGG | - | chr1.1:2603746-2603765 | MS.gene24322:intron | 10.0% |
| !! | TAATATAAAAATATTTAAGC+TGG | + | chr1.1:2603386-2603405 | None:intergenic | 10.0% |
| !! | TATATATTACCAAAAATTAA+CGG | + | chr1.1:2603225-2603244 | None:intergenic | 10.0% |
| !! | TATATTTATATATGTATGTT+AGG | + | chr1.1:2604162-2604181 | None:intergenic | 10.0% |
| !!! | AAAAAACAAAAAAATGATTT+TGG | + | chr1.1:2601861-2601880 | None:intergenic | 10.0% |
| !!! | AAAAAACAAAAAATTGATTT+TGG | - | chr1.1:2601123-2601142 | MS.gene24322:CDS | 10.0% |
| !!! | TTTTGTTTTTTTTTTACTAT+GGG | - | chr1.1:2600457-2600476 | MS.gene24322:intron | 10.0% |
| !!! | TTTTTGTTTTTTTTTTACTA+TGG | - | chr1.1:2600456-2600475 | MS.gene24322:intron | 10.0% |
| !! | AAAATAAACAGAAAATTGAT+GGG | + | chr1.1:2602292-2602311 | None:intergenic | 15.0% |
| !! | CATTTATTTGATAAATTATG+TGG | + | chr1.1:2603860-2603879 | None:intergenic | 15.0% |
| !! | CTATTAAAATGAATAAATGA+TGG | + | chr1.1:2605168-2605187 | None:intergenic | 15.0% |
| !! | GTTGAACAAAAAATAAAAAA+AGG | - | chr1.1:2604761-2604780 | MS.gene24322:intron | 15.0% |
| !!! | ATTAATTTTAGGGTTTATAT+TGG | + | chr1.1:2600433-2600452 | None:intergenic | 15.0% |
| !!! | TACTTTTTGATATGTAAAAA+TGG | - | chr1.1:2602816-2602835 | MS.gene24322:intron | 15.0% |
| !!! | TGATTTTGGAAATTAAAAAA+GGG | - | chr1.1:2601137-2601156 | MS.gene24322:intron | 15.0% |
| !!! | TTGATTTTGGAAATTAAAAA+AGG | - | chr1.1:2601136-2601155 | MS.gene24322:CDS | 15.0% |
| !!! | TTTTACATATCAAAAAGTAA+AGG | + | chr1.1:2602815-2602834 | None:intergenic | 15.0% |
| !! | AAAAATTACATTTACACACA+TGG | + | chr1.1:2601103-2601122 | None:intergenic | 20.0% |
| !! | AAAACATCAAATTATTACCT+TGG | + | chr1.1:2604482-2604501 | None:intergenic | 20.0% |
| !! | AAATCTAACACTAACAAAAA+TGG | + | chr1.1:2603808-2603827 | None:intergenic | 20.0% |
| !! | AACCTTCATATATACAAAAT+TGG | + | chr1.1:2605252-2605271 | None:intergenic | 20.0% |
| !! | AAGAATGTAAAAAGTTGTTA+AGG | + | chr1.1:2602761-2602780 | None:intergenic | 20.0% |
| !! | AATAAACATCATGAATGAAA+TGG | + | chr1.1:2603122-2603141 | None:intergenic | 20.0% |
| !! | AATAGAAGAAAGTCTAAATT+TGG | - | chr1.1:2600635-2600654 | MS.gene24322:intron | 20.0% |
| !! | AATTTATGAACAAATAACCA+TGG | - | chr1.1:2602171-2602190 | MS.gene24322:intron | 20.0% |
| !! | ACAAACGTAAAATATTATCT+GGG | + | chr1.1:2604564-2604583 | None:intergenic | 20.0% |
| !! | AGAATGTAAAAAGTTGTTAA+GGG | + | chr1.1:2602760-2602779 | None:intergenic | 20.0% |
| !! | ATATAAATATATAAGCGACA+TGG | - | chr1.1:2604171-2604190 | MS.gene24322:intron | 20.0% |
| !! | ATTAAAATGAGAAATTTGAC+TGG | + | chr1.1:2602568-2602587 | None:intergenic | 20.0% |
| !! | ATTATTCTATTATTTCAGCT+TGG | - | chr1.1:2602326-2602345 | MS.gene24322:intron | 20.0% |
| !! | ATTTATGAACAAATAACCAT+GGG | - | chr1.1:2602172-2602191 | MS.gene24322:intron | 20.0% |
| !! | GAAAATAAACAGAAAATTGA+TGG | + | chr1.1:2602293-2602312 | None:intergenic | 20.0% |
| !! | TATTACTTATTACAAGCATT+AGG | + | chr1.1:2603953-2603972 | None:intergenic | 20.0% |
| !! | TCCATGTTACAATTAAATTA+AGG | - | chr1.1:2603147-2603166 | MS.gene24322:intron | 20.0% |
| !! | TTTCTAAATGATTTCAAACA+TGG | + | chr1.1:2600399-2600418 | None:intergenic | 20.0% |
| !! | TTTGATATGTAAAAATGGAT+GGG | - | chr1.1:2602821-2602840 | MS.gene24322:intron | 20.0% |
| !!! | ATTTTGGAAATTAAGAGAAA+AGG | + | chr1.1:2601845-2601864 | None:intergenic | 20.0% |
| !!! | CATTTTAATGTTTTTGTAAC+TGG | - | chr1.1:2602579-2602598 | MS.gene24322:intron | 20.0% |
| !!! | GTTTGAAATCATTTAGAAAT+TGG | - | chr1.1:2600400-2600419 | MS.gene24322:intron | 20.0% |
| !!! | TTTGTATATATGAAGGTTTT+CGG | - | chr1.1:2605254-2605273 | MS.gene24322:intron | 20.0% |
| !!! | TTTTGATATGTAAAAATGGA+TGG | - | chr1.1:2602820-2602839 | MS.gene24322:intron | 20.0% |
| ! | AAATCGCTCAATTAAAAACA+TGG | + | chr1.1:2600983-2601002 | None:intergenic | 25.0% |
| ! | AATCACAATTCGATGATAAA+AGG | + | chr1.1:2600149-2600168 | None:intergenic | 25.0% |
| ! | AATCGCTCAATTAAAAACAT+GGG | + | chr1.1:2600982-2601001 | None:intergenic | 25.0% |
| ! | ACATAGCTGAATAAAAAAAG+AGG | - | chr1.1:2604642-2604661 | MS.gene24322:intron | 25.0% |
| ! | ATCTTATTCTTTATCTTCAC+AGG | - | chr1.1:2604053-2604072 | MS.gene24322:intron | 25.0% |
| ! | ATGTTATCATTTCCATGTTT+GGG | + | chr1.1:2600669-2600688 | None:intergenic | 25.0% |
| ! | ATTAATCATATGCTTGCTTA+GGG | - | chr1.1:2603402-2603421 | MS.gene24322:intron | 25.0% |
| ! | ATTCAATGCTCATAAACAAA+GGG | - | chr1.1:2602254-2602273 | MS.gene24322:intron | 25.0% |
| ! | ATTTCATGCTTGAATGTAAT+AGG | - | chr1.1:2600239-2600258 | MS.gene24322:intron | 25.0% |
| ! | CAGAAAGTGAAAAATGTAAA+AGG | - | chr1.1:2599933-2599952 | MS.gene24322:CDS | 25.0% |
| ! | CTAGATGAATACCAATAAAA+AGG | + | chr1.1:2605097-2605116 | None:intergenic | 25.0% |
| ! | CTAGTATCTAAATTAGCATT+TGG | + | chr1.1:2602911-2602930 | None:intergenic | 25.0% |
| ! | CTTAACTAGTTCACAATTAA+AGG | - | chr1.1:2604013-2604032 | MS.gene24322:intron | 25.0% |
| ! | CTTGTTAATGCAATTTGTAA+TGG | - | chr1.1:2599750-2599769 | MS.gene24322:CDS | 25.0% |
| ! | GAATGTAAAAAGTTGTTAAG+GGG | + | chr1.1:2602759-2602778 | None:intergenic | 25.0% |
| ! | GACAAACGTAAAATATTATC+TGG | + | chr1.1:2604565-2604584 | None:intergenic | 25.0% |
| ! | GATATTGTAGCTATCATATA+CGG | + | chr1.1:2600341-2600360 | None:intergenic | 25.0% |
| ! | GCCTTAATTTAATTGTAACA+TGG | + | chr1.1:2603151-2603170 | None:intergenic | 25.0% |
| ! | TATTAATCATATGCTTGCTT+AGG | - | chr1.1:2603401-2603420 | MS.gene24322:intron | 25.0% |
| ! | TCATTTATGATAAGATCCAA+TGG | - | chr1.1:2604217-2604236 | MS.gene24322:intron | 25.0% |
| ! | TCTTATTCTTTATCTTCACA+GGG | - | chr1.1:2604054-2604073 | MS.gene24322:intron | 25.0% |
| ! | TGAAAACTGATCAAGTTTAA+AGG | + | chr1.1:2604357-2604376 | None:intergenic | 25.0% |
| ! | TTATATATGTATGTTAGGAC+AGG | + | chr1.1:2604157-2604176 | None:intergenic | 25.0% |
| ! | TTGATATGTAAAAATGGATG+GGG | - | chr1.1:2602822-2602841 | MS.gene24322:intron | 25.0% |
| ! | TTTATCATCGAATTGTGATT+AGG | - | chr1.1:2600149-2600168 | MS.gene24322:intron | 25.0% |
| ! | TTTATGAACAAATAACCATG+GGG | - | chr1.1:2602173-2602192 | MS.gene24322:intron | 25.0% |
| !! | ATGAATCATCAAGGATATTT+TGG | - | chr1.1:2600810-2600829 | MS.gene24322:CDS | 25.0% |
| !! | GGCTTAGTAGAATTTTTAAA+GGG | - | chr1.1:2599652-2599671 | MS.gene24322:CDS | 25.0% |
| !! | GTAAGTTGAATGAAAATGTA+TGG | - | chr1.1:2603424-2603443 | MS.gene24322:intron | 25.0% |
| !! | TGCCAATTTTGTATATATGA+AGG | - | chr1.1:2605247-2605266 | MS.gene24322:intron | 25.0% |
| !! | TGGCTTAGTAGAATTTTTAA+AGG | - | chr1.1:2599651-2599670 | MS.gene24322:CDS | 25.0% |
| !!! | AATCCCATTTTATTTCATTG+CGG | - | chr1.1:2605210-2605229 | MS.gene24322:intron | 25.0% |
| !!! | ATGGTTTAGAATTTTTTGTC+TGG | - | chr1.1:2599769-2599788 | MS.gene24322:CDS | 25.0% |
| !!! | CTTGATATTTTAGAGCATTT+TGG | + | chr1.1:2603985-2604004 | None:intergenic | 25.0% |
| !!! | GAATGTAGCTTTAAAAAAAC+TGG | - | chr1.1:2600866-2600885 | MS.gene24322:intron | 25.0% |
| !!! | TTCTGTTTATTTTCAGTTGA+TGG | - | chr1.1:2602299-2602318 | MS.gene24322:intron | 25.0% |
| AAAGGAGAAATGGAAAAAAC+AGG | + | chr1.1:2600131-2600150 | None:intergenic | 30.0% | |
| ACATCATCACTAAAACACAT+GGG | - | chr1.1:2601940-2601959 | MS.gene24322:CDS | 30.0% | |
| ACATCATCACTAAAACACAT+GGG | + | chr1.1:2601959-2601940 | None:intergenic | 30.0% | |
| ACCTCACAAAATATCTACAA+CGG | + | chr1.1:2604900-2604919 | None:intergenic | 30.0% | |
| ACTGCAATTCTCATTCTATA+CGG | - | chr1.1:2604452-2604471 | MS.gene24322:intron | 30.0% | |
| AGATAAAGAATAAGATACGC+AGG | + | chr1.1:2604049-2604068 | None:intergenic | 30.0% | |
| ATCGCTCAATTAAAAACATG+GGG | + | chr1.1:2600981-2601000 | None:intergenic | 30.0% | |
| ATCTAAATTAGCATTTGGCA+TGG | + | chr1.1:2602906-2602925 | None:intergenic | 30.0% | |
| CATGTTATCATTTCCATGTT+TGG | + | chr1.1:2600670-2600689 | None:intergenic | 30.0% | |
| CATTCAATGCTCATAAACAA+AGG | - | chr1.1:2602253-2602272 | MS.gene24322:intron | 30.0% | |
| CTGAGATTGAAGTTAAGTTA+TGG | - | chr1.1:2600037-2600056 | MS.gene24322:intron | 30.0% | |
| CTTCTTCTAATTGTGATTTG+TGG | + | chr1.1:2600596-2600615 | None:intergenic | 30.0% | |
| GAAATTCAATAGTAAGCAAC+TGG | + | chr1.1:2600224-2600243 | None:intergenic | 30.0% | |
| GATGATCTTATGAATCATCA+AGG | - | chr1.1:2600801-2600820 | MS.gene24322:CDS | 30.0% | |
| GATTATTGCATCTTCTTGAA+AGG | - | chr1.1:2599976-2599995 | MS.gene24322:intron | 30.0% | |
| GATTTGAAAATGCTATTCTC+TGG | - | chr1.1:2603823-2603842 | MS.gene24322:intron | 30.0% | |
| GGAATTTCTGCTTATATTGA+TGG | - | chr1.1:2600478-2600497 | MS.gene24322:intron | 30.0% | |
| TATAGCATGCTTTATGGAAA+GGG | + | chr1.1:2602685-2602704 | None:intergenic | 30.0% | |
| TATATTCAATAAGACCAGCA+GGG | + | chr1.1:2603271-2603290 | None:intergenic | 30.0% | |
| TCTCAACAATAAGTGAAGAT+TGG | - | chr1.1:2601684-2601703 | MS.gene24322:CDS | 30.0% | |
| TGTTATCATGTTCATGTGAA+GGG | + | chr1.1:2603325-2603344 | None:intergenic | 30.0% | |
| TTACATAATAGGATATGTGC+TGG | - | chr1.1:2602414-2602433 | MS.gene24322:intron | 30.0% | |
| TTATAGCATGCTTTATGGAA+AGG | + | chr1.1:2602686-2602705 | None:intergenic | 30.0% | |
| TTCGATGATAAAAGGAGAAA+TGG | + | chr1.1:2600141-2600160 | None:intergenic | 30.0% | |
| TTCTTTCACAGATTACTTAC+CGG | - | chr1.1:2605005-2605024 | MS.gene24322:intron | 30.0% | |
| TTTCCATAAAGCATGCTATA+AGG | - | chr1.1:2602685-2602704 | MS.gene24322:CDS | 30.0% | |
| TTTCCTTATAGCATGCTTTA+TGG | + | chr1.1:2602691-2602710 | None:intergenic | 30.0% | |
| ! | ATACACTGTTCGTTCTTTTT+AGG | - | chr1.1:2600906-2600925 | MS.gene24322:intron | 30.0% |
| ! | CTTTCTCGATTCCTTTTTAT+TGG | - | chr1.1:2605083-2605102 | MS.gene24322:intron | 30.0% |
| ! | TCTGTACTCAAGGTTTTTAT+TGG | - | chr1.1:2602609-2602628 | MS.gene24322:intron | 30.0% |
| ! | TGGTTTTTATTCTGTACTCA+AGG | - | chr1.1:2602599-2602618 | MS.gene24322:intron | 30.0% |
| !! | TGCTGGTCTTATTGAATATA+GGG | - | chr1.1:2603271-2603290 | MS.gene24322:intron | 30.0% |
| !! | TTTTAAAGGGTCTGATCATA+AGG | - | chr1.1:2599665-2599684 | MS.gene24322:CDS | 30.0% |
| !!! | ATATTTTAGAGCATTTTGGC+AGG | + | chr1.1:2603981-2604000 | None:intergenic | 30.0% |
| !!! | ATCATCAAGGATATTTTGGT+AGG | - | chr1.1:2600814-2600833 | MS.gene24322:CDS | 30.0% |
| !!! | TAGAATTTTTTGTCTGGTGT+TGG | - | chr1.1:2599775-2599794 | MS.gene24322:CDS | 30.0% |
| !!! | TATTTTAGAGCATTTTGGCA+GGG | + | chr1.1:2603980-2603999 | None:intergenic | 30.0% |
| !!! | TTCTGAGGAACTATTTTTTG+TGG | - | chr1.1:2603779-2603798 | MS.gene24322:intron | 30.0% |
| !!! | TTTGATTGGGTTTTGAATGT+AGG | - | chr1.1:2599842-2599861 | MS.gene24322:CDS | 30.0% |
| ACAATTGACAAAAGATAGGG+GGG | + | chr1.1:2600947-2600966 | None:intergenic | 35.0% | |
| ACAGCCGCAATGAAATAAAA+TGG | + | chr1.1:2605217-2605236 | None:intergenic | 35.0% | |
| ACTTCAGTATATCAGCATGA+AGG | + | chr1.1:2603591-2603610 | None:intergenic | 35.0% | |
| AGATGTATATGATGCAGATG+AGG | + | chr1.1:2605386-2605405 | None:intergenic | 35.0% | |
| ATCATCACTAAAACACATGG+GGG | - | chr1.1:2601942-2601961 | MS.gene24322:CDS | 35.0% | |
| ATCATCACTAAAACACATGG+GGG | + | chr1.1:2601961-2601942 | None:intergenic | 35.0% | |
| ATTACTTGCCATCAACTTCA+GGG | - | chr1.1:2599724-2599743 | MS.gene24322:CDS | 35.0% | |
| CACAATTGACAAAAGATAGG+GGG | + | chr1.1:2600948-2600967 | None:intergenic | 35.0% | |
| CACATCATCACTAAAACACA+TGG | - | chr1.1:2601939-2601958 | MS.gene24322:CDS | 35.0% | |
| CACATCATCACTAAAACACA+TGG | + | chr1.1:2601958-2601939 | None:intergenic | 35.0% | |
| CAGCCGCAATGAAATAAAAT+GGG | + | chr1.1:2605216-2605235 | None:intergenic | 35.0% | |
| CATCATCACTAAAACACATG+GGG | - | chr1.1:2601941-2601960 | MS.gene24322:CDS | 35.0% | |
| CATCATCACTAAAACACATG+GGG | + | chr1.1:2601960-2601941 | None:intergenic | 35.0% | |
| CGCACAATTGACAAAAGATA+GGG | + | chr1.1:2600950-2600969 | None:intergenic | 35.0% | |
| CTAAGTCAAGATGTTGAAGA+AGG | - | chr1.1:2605280-2605299 | MS.gene24322:CDS | 35.0% | |
| CTATATTCAATAAGACCAGC+AGG | + | chr1.1:2603272-2603291 | None:intergenic | 35.0% | |
| CTGATCATAAGGTTTCTGAA+GGG | - | chr1.1:2599676-2599695 | MS.gene24322:CDS | 35.0% | |
| CTTCAGTATATCAGCATGAA+GGG | + | chr1.1:2603590-2603609 | None:intergenic | 35.0% | |
| GAAGAGTTAATCTTGACCAT+TGG | + | chr1.1:2604236-2604255 | None:intergenic | 35.0% | |
| GCACAATTGACAAAAGATAG+GGG | + | chr1.1:2600949-2600968 | None:intergenic | 35.0% | |
| GCATTTCTTATACCTGCAAT+TGG | - | chr1.1:2603071-2603090 | MS.gene24322:intron | 35.0% | |
| GGAAAACGTTATCCAGATTA+CGG | - | chr1.1:2602850-2602869 | MS.gene24322:intron | 35.0% | |
| GTGGTATAGTTTGAAGGAAT+TGG | - | chr1.1:2601553-2601572 | MS.gene24322:CDS | 35.0% | |
| GTGTTATCATGTTCATGTGA+AGG | + | chr1.1:2603326-2603345 | None:intergenic | 35.0% | |
| TAAACCCATCTCCATAAACA+GGG | + | chr1.1:2605483-2605502 | None:intergenic | 35.0% | |
| TAAGTTCCGTATCCAAAGAA+GGG | - | chr1.1:2602206-2602225 | MS.gene24322:intron | 35.0% | |
| TACAAAAGCTATCCCTTCTT+TGG | + | chr1.1:2602221-2602240 | None:intergenic | 35.0% | |
| TACCAAAAATTAACGGCAAC+AGG | + | chr1.1:2603218-2603237 | None:intergenic | 35.0% | |
| TAGACTTTCTTCTATTGCTC+TGG | + | chr1.1:2600631-2600650 | None:intergenic | 35.0% | |
| TATTACTTGCCATCAACTTC+AGG | - | chr1.1:2599723-2599742 | MS.gene24322:CDS | 35.0% | |
| TCGCACAATTGACAAAAGAT+AGG | + | chr1.1:2600951-2600970 | None:intergenic | 35.0% | |
| TCTGATCATAAGGTTTCTGA+AGG | - | chr1.1:2599675-2599694 | MS.gene24322:CDS | 35.0% | |
| TGCATCTTCTTGAAAGGATA+TGG | - | chr1.1:2599982-2600001 | MS.gene24322:intron | 35.0% | |
| TGTCTTTCAACCAAAAGTAG+AGG | + | chr1.1:2603652-2603671 | None:intergenic | 35.0% | |
| TTATCATTTCCATGTTTGGG+AGG | + | chr1.1:2600666-2600685 | None:intergenic | 35.0% | |
| TTATCCAGATTACGGTCTTA+TGG | - | chr1.1:2602858-2602877 | MS.gene24322:intron | 35.0% | |
| TTCAGTATATCAGCATGAAG+GGG | + | chr1.1:2603589-2603608 | None:intergenic | 35.0% | |
| TTCTTATACCTGCAATTGGA+GGG | - | chr1.1:2603075-2603094 | MS.gene24322:intron | 35.0% | |
| TTGGCATGGTTATACTCATA+AGG | + | chr1.1:2602892-2602911 | None:intergenic | 35.0% | |
| TTTCTTATACCTGCAATTGG+AGG | - | chr1.1:2603074-2603093 | MS.gene24322:intron | 35.0% | |
| TTTGTGCAGCAGTCTATATT+CGG | + | chr1.1:2602030-2602049 | None:intergenic | 35.0% | |
| ! | ATAGTAAGCAACTGGTTTCT+TGG | + | chr1.1:2600216-2600235 | None:intergenic | 35.0% |
| ! | CTGAACAAGCTTTTATCTCT+GGG | - | chr1.1:2603005-2603024 | MS.gene24322:intron | 35.0% |
| ! | GCATCATATACATCTAAGAC+AGG | - | chr1.1:2605391-2605410 | MS.gene24322:intron | 35.0% |
| ! | GTAGAATTTGAAACCTGCAA+TGG | + | chr1.1:2601228-2601247 | None:intergenic | 35.0% |
| ! | TATCCAGATTACGGTCTTAT+GGG | - | chr1.1:2602859-2602878 | MS.gene24322:intron | 35.0% |
| ! | TCCGTTGTAGATATTTTGTG+AGG | - | chr1.1:2604896-2604915 | MS.gene24322:intron | 35.0% |
| ! | TCTGAACAAGCTTTTATCTC+TGG | - | chr1.1:2603004-2603023 | MS.gene24322:intron | 35.0% |
| ! | TCTTGAAAGGATATGGATTG+CGG | - | chr1.1:2599989-2600008 | MS.gene24322:intron | 35.0% |
| ! | TGAGAAATTTGACTGGTCAA+AGG | + | chr1.1:2602561-2602580 | None:intergenic | 35.0% |
| ! | TGCAATACTGAGATTGGTTA+TGG | - | chr1.1:2602438-2602457 | MS.gene24322:intron | 35.0% |
| !! | AACGGCATTAATTTGTTCTG+AGG | - | chr1.1:2603764-2603783 | MS.gene24322:intron | 35.0% |
| !! | AATAATGCTGGTTCCAGAAT+GGG | + | chr1.1:2603301-2603320 | None:intergenic | 35.0% |
| !! | CTGCTGGTCTTATTGAATAT+AGG | - | chr1.1:2603270-2603289 | MS.gene24322:intron | 35.0% |
| !! | TGTTGAAGAAGGTATTTGTC+AGG | - | chr1.1:2605291-2605310 | MS.gene24322:CDS | 35.0% |
| !! | TTTTCAAGAAGACCTAGACT+CGG | - | chr1.1:2604371-2604390 | MS.gene24322:intron | 35.0% |
| !!! | AAGGATATTTTGGTAGGAAG+GGG | - | chr1.1:2600820-2600839 | MS.gene24322:CDS | 35.0% |
| !!! | AGAAGGTATTTGTCAGGTTT+TGG | - | chr1.1:2605297-2605316 | MS.gene24322:CDS | 35.0% |
| !!! | ATTTTAGAGCATTTTGGCAG+GGG | + | chr1.1:2603979-2603998 | None:intergenic | 35.0% |
| !!! | CAAGGATATTTTGGTAGGAA+GGG | - | chr1.1:2600819-2600838 | MS.gene24322:CDS | 35.0% |
| !!! | GGTTTTGAATGTAGGATGAT+TGG | - | chr1.1:2599850-2599869 | MS.gene24322:CDS | 35.0% |
| !!! | TCAAGGATATTTTGGTAGGA+AGG | - | chr1.1:2600818-2600837 | MS.gene24322:CDS | 35.0% |
| AAACCCATCTCCATAAACAG+GGG | + | chr1.1:2605482-2605501 | None:intergenic | 40.0% | |
| AAAGATGCTGATGCGATAAG+AGG | + | chr1.1:2604936-2604955 | None:intergenic | 40.0% | |
| AAGATGCTGATGCGATAAGA+GGG | + | chr1.1:2604935-2604954 | None:intergenic | 40.0% | |
| ACCAATTCAGTATTTCCCGA+TGG | - | chr1.1:2600695-2600714 | MS.gene24322:intron | 40.0% | |
| ACGGGTAGTTTCCCATATTA+AGG | - | chr1.1:2605565-2605584 | MS.gene24322:CDS | 40.0% | |
| ACTTAGTTCATAGTACCCCA+TGG | + | chr1.1:2602191-2602210 | None:intergenic | 40.0% | |
| AGAACGCAAAGGTTCTATCA+TGG | + | chr1.1:2604722-2604741 | None:intergenic | 40.0% | |
| AGCTATCCCTTCTTTGGATA+CGG | + | chr1.1:2602215-2602234 | None:intergenic | 40.0% | |
| ATATGATGCAGATGAGGATG+AGG | + | chr1.1:2605380-2605399 | None:intergenic | 40.0% | |
| ATATTGCCCATAAGGATGGA+AGG | - | chr1.1:2603509-2603528 | MS.gene24322:intron | 40.0% | |
| ATCAAGATCGAACACGTTGA+CGG | - | chr1.1:2601425-2601444 | MS.gene24322:intron | 40.0% | |
| ATGATAGGAGAAGGAGGATA+TGG | - | chr1.1:2601608-2601627 | MS.gene24322:CDS | 40.0% | |
| ATGTAATGCAGACTCAGTTG+TGG | - | chr1.1:2602374-2602393 | MS.gene24322:intron | 40.0% | |
| ATTTCCCCTGTTTATGGAGA+TGG | - | chr1.1:2605475-2605494 | MS.gene24322:intron | 40.0% | |
| ATTTGCCAAGTCAGAAAGTG+TGG | - | chr1.1:2602107-2602126 | MS.gene24322:intron | 40.0% | |
| CAAAAAGCAGTTCGCAAGTA+TGG | - | chr1.1:2605511-2605530 | MS.gene24322:CDS | 40.0% | |
| CAATTCAGTATTTCCCGATG+GGG | - | chr1.1:2600697-2600716 | MS.gene24322:intron | 40.0% | |
| CACAATTCCACTCGTTTCTA+AGG | - | chr1.1:2601388-2601407 | MS.gene24322:intron | 40.0% | |
| CACCCAAGCAATTTAGATAG+CGG | + | chr1.1:2602464-2602483 | None:intergenic | 40.0% | |
| CACGCACACGTATAAATAAC+AGG | + | chr1.1:2602065-2602084 | None:intergenic | 40.0% | |
| CCAATTCAGTATTTCCCGAT+GGG | - | chr1.1:2600696-2600715 | MS.gene24322:intron | 40.0% | |
| CCTACCAATCTCTGATTATG+AGG | - | chr1.1:2602524-2602543 | MS.gene24322:CDS | 40.0% | |
| CCTCATAATCAGAGATTGGT+AGG | + | chr1.1:2602527-2602546 | None:intergenic | 40.0% | |
| CGTGGAAAACTACAAAAGCA+AGG | + | chr1.1:2602651-2602670 | None:intergenic | 40.0% | |
| CTAAACCCATCTCCATAAAC+AGG | + | chr1.1:2605484-2605503 | None:intergenic | 40.0% | |
| CTAACTGCAAAAGAACGCAA+AGG | + | chr1.1:2604733-2604752 | None:intergenic | 40.0% | |
| CTAAGTTCCGTATCCAAAGA+AGG | - | chr1.1:2602205-2602224 | MS.gene24322:intron | 40.0% | |
| CTGGTTTCTTGGTTGATCAA+AGG | + | chr1.1:2600205-2600224 | None:intergenic | 40.0% | |
| GAATTGGAGAATGTGACAGA+TGG | - | chr1.1:2601569-2601588 | MS.gene24322:CDS | 40.0% | |
| GACTGCAGACATATATCTCA+TGG | - | chr1.1:2603192-2603211 | MS.gene24322:intron | 40.0% | |
| GAGATATATGTCTGCAGTCA+AGG | + | chr1.1:2603191-2603210 | None:intergenic | 40.0% | |
| GGATATATTGCCCATAAGGA+TGG | - | chr1.1:2603505-2603524 | MS.gene24322:intron | 40.0% | |
| GGATATGGAATTGTATGCAG+AGG | - | chr1.1:2601623-2601642 | MS.gene24322:CDS | 40.0% | |
| GGCAAACGAAAGTCTATGAT+AGG | + | chr1.1:2602794-2602813 | None:intergenic | 40.0% | |
| GGGAAATGTCTGATTCAATC+TGG | + | chr1.1:2605462-2605481 | None:intergenic | 40.0% | |
| GTAAAAATGGATGGGGAGAA+TGG | - | chr1.1:2602829-2602848 | MS.gene24322:intron | 40.0% | |
| GTAACCAAGAAAATGTACGC+TGG | + | chr1.1:2605135-2605154 | None:intergenic | 40.0% | |
| TAAATTGCTTGGGTGCATTC+TGG | - | chr1.1:2602469-2602488 | MS.gene24322:intron | 40.0% | |
| TCAGACATTTCCCCTGTTTA+TGG | - | chr1.1:2605469-2605488 | MS.gene24322:intron | 40.0% | |
| TCATTCTATACGGTCTTCCA+AGG | - | chr1.1:2604462-2604481 | MS.gene24322:intron | 40.0% | |
| TGCACCTCATAATCAGAGAT+TGG | + | chr1.1:2602531-2602550 | None:intergenic | 40.0% | |
| TGCAGAGGAATTCTTCAAGA+TGG | - | chr1.1:2601638-2601657 | MS.gene24322:CDS | 40.0% | |
| TGCTTGCAGACATCACATTT+CGG | + | chr1.1:2602722-2602741 | None:intergenic | 40.0% | |
| TTACTTGCCATCAACTTCAG+GGG | - | chr1.1:2599725-2599744 | MS.gene24322:CDS | 40.0% | |
| TTAGGACAGGAGAACATAAC+AGG | + | chr1.1:2604144-2604163 | None:intergenic | 40.0% | |
| TTCACAAAAGCTAAACCCCA+TGG | + | chr1.1:2604694-2604713 | None:intergenic | 40.0% | |
| TTCGCAAGTATGGCCTAAAA+AGG | - | chr1.1:2605521-2605540 | MS.gene24322:CDS | 40.0% | |
| TTCGGCTAGTGTTTAGTACA+AGG | + | chr1.1:2602012-2602031 | None:intergenic | 40.0% | |
| TTTCCCCTGTTTATGGAGAT+GGG | - | chr1.1:2605476-2605495 | MS.gene24322:intron | 40.0% | |
| ! | AAATTGATTCTCCCAAGGGA+TGG | + | chr1.1:2604967-2604986 | None:intergenic | 40.0% |
| ! | ACGCATTTTGCTCTTCTTTG+AGG | + | chr1.1:2601348-2601367 | None:intergenic | 40.0% |
| ! | AGTTCCAGCGTACATTTTCT+TGG | - | chr1.1:2605128-2605147 | MS.gene24322:intron | 40.0% |
| ! | CGTTCTTTTGCAGTTAGGAA+AGG | - | chr1.1:2604736-2604755 | MS.gene24322:intron | 40.0% |
| ! | CTTTGCGTTCTTTTGCAGTT+AGG | - | chr1.1:2604731-2604750 | MS.gene24322:intron | 40.0% |
| ! | CTTTTGTAGTTTTCCACGTC+TGG | - | chr1.1:2602653-2602672 | MS.gene24322:intron | 40.0% |
| ! | GAATGTGACAGATGGATTTG+CGG | - | chr1.1:2601577-2601596 | MS.gene24322:CDS | 40.0% |
| ! | GAATTTGAAACCTGCAATGG+AGG | + | chr1.1:2601225-2601244 | None:intergenic | 40.0% |
| ! | GCACAAATTGATTCTCCCAA+GGG | + | chr1.1:2604971-2604990 | None:intergenic | 40.0% |
| ! | GTAGATTGTTTTCCTGTTCC+TGG | - | chr1.1:2602942-2602961 | MS.gene24322:intron | 40.0% |
| ! | GTGATTTGTGGTCTGTAAGA+TGG | + | chr1.1:2600584-2600603 | None:intergenic | 40.0% |
| ! | TATGGTGAAGGGTCCTTTTT+AGG | + | chr1.1:2605537-2605556 | None:intergenic | 40.0% |
| ! | TCAGCAAGTTCCTCTACTTT+TGG | - | chr1.1:2603639-2603658 | MS.gene24322:intron | 40.0% |
| ! | TGCACAAATTGATTCTCCCA+AGG | + | chr1.1:2604972-2604991 | None:intergenic | 40.0% |
| ! | TTTGCCAAGTCAGAAAGTGT+GGG | - | chr1.1:2602108-2602127 | MS.gene24322:intron | 40.0% |
| !! | CAATAATGCTGGTTCCAGAA+TGG | + | chr1.1:2603302-2603321 | None:intergenic | 40.0% |
| !! | CTCCTTTTGAGAAGAAGCTT+GGG | - | chr1.1:2605422-2605441 | MS.gene24322:intron | 40.0% |
| !! | TCCTTTTGAGAAGAAGCTTG+GGG | - | chr1.1:2605423-2605442 | MS.gene24322:intron | 40.0% |
| !! | TCTTCTTTGAGGTTCTGTTC+CGG | + | chr1.1:2601337-2601356 | None:intergenic | 40.0% |
| !!! | ATTGTGTCGCGTGTTTTGAT+TGG | - | chr1.1:2599828-2599847 | MS.gene24322:CDS | 40.0% |
| !!! | CAGAAGCACTGTGTTTTACA+TGG | - | chr1.1:2604584-2604603 | MS.gene24322:CDS | 40.0% |
| !!! | TTGTGTCGCGTGTTTTGATT+GGG | - | chr1.1:2599829-2599848 | MS.gene24322:CDS | 40.0% |
| AAAGGGAGCTAGCACAGTAA+TGG | - | chr1.1:2601154-2601173 | MS.gene24322:intron | 45.0% | |
| AACTACCCGTCACCTTGATA+TGG | + | chr1.1:2605555-2605574 | None:intergenic | 45.0% | |
| AACTCATACCTGTACCCCAT+CGG | + | chr1.1:2600714-2600733 | None:intergenic | 45.0% | |
| AAGGACCCTTCACCATATCA+AGG | - | chr1.1:2605540-2605559 | MS.gene24322:CDS | 45.0% | |
| AATATAGGGCACACCCATTC+TGG | - | chr1.1:2603285-2603304 | MS.gene24322:intron | 45.0% | |
| AATTATTCCGGACCAGGAAC+AGG | + | chr1.1:2602957-2602976 | None:intergenic | 45.0% | |
| ACAAGACCAGCACGAATAAG+TGG | + | chr1.1:2600764-2600783 | None:intergenic | 45.0% | |
| ACAAGTACCCCTGAAGTTGA+TGG | + | chr1.1:2599735-2599754 | None:intergenic | 45.0% | |
| ACCAGAAAGGGGGAAAAAGA+TGG | - | chr1.1:2601972-2601991 | MS.gene24322:intron | 45.0% | |
| ACCAGAAAGGGGGAAAAAGA+TGG | + | chr1.1:2601991-2601972 | None:intergenic | 45.0% | |
| ACGATCTCCTTAGAAACGAG+TGG | + | chr1.1:2601398-2601417 | None:intergenic | 45.0% | |
| ACTCCCATAAGACCGTAATC+TGG | + | chr1.1:2602865-2602884 | None:intergenic | 45.0% | |
| AGAAACGAGTGGAATTGTGC+TGG | + | chr1.1:2601387-2601406 | None:intergenic | 45.0% | |
| AGAGCTTCCTTCCATCCTTA+TGG | + | chr1.1:2603519-2603538 | None:intergenic | 45.0% | |
| AGATTGGTAGGTTGCAAGCA+CGG | + | chr1.1:2602515-2602534 | None:intergenic | 45.0% | |
| ATAAGACCAGCAGGGTTTGT+TGG | + | chr1.1:2603263-2603282 | None:intergenic | 45.0% | |
| CAAGACCAGCACGAATAAGT+GGG | + | chr1.1:2600763-2600782 | None:intergenic | 45.0% | |
| CAATTCCCACTTATTCGTGC+TGG | - | chr1.1:2600755-2600774 | MS.gene24322:CDS | 45.0% | |
| CACTTGATTCTTCATCCTCG+AGG | + | chr1.1:2601459-2601478 | None:intergenic | 45.0% | |
| CAGAAAGGGGGAAAAAGATG+GGG | - | chr1.1:2601974-2601993 | MS.gene24322:intron | 45.0% | |
| CAGAAAGGGGGAAAAAGATG+GGG | + | chr1.1:2601993-2601974 | None:intergenic | 45.0% | |
| CATGTGAAGGGCAATAATGC+TGG | + | chr1.1:2603313-2603332 | None:intergenic | 45.0% | |
| CCAAGCTTCTTCTCAAAAGG+AGG | + | chr1.1:2605424-2605443 | None:intergenic | 45.0% | |
| CCAGAAAGGGGGAAAAAGAT+GGG | - | chr1.1:2601973-2601992 | MS.gene24322:intron | 45.0% | |
| CCAGAAAGGGGGAAAAAGAT+GGG | + | chr1.1:2601992-2601973 | None:intergenic | 45.0% | |
| CCCATCGGGAAATACTGAAT+TGG | + | chr1.1:2600699-2600718 | None:intergenic | 45.0% | |
| CCTTCACCATATCAAGGTGA+CGG | - | chr1.1:2605546-2605565 | MS.gene24322:CDS | 45.0% | |
| CGAAGAGAGTAGTAGTGTGT+CGG | - | chr1.1:2601490-2601509 | MS.gene24322:intron | 45.0% | |
| CGTCACCTTGATATGGTGAA+GGG | + | chr1.1:2605548-2605567 | None:intergenic | 45.0% | |
| CTAAACCCCATGGATATCAC+GGG | + | chr1.1:2604684-2604703 | None:intergenic | 45.0% | |
| CTACGATTGCGAGGAAAATG+AGG | + | chr1.1:2601259-2601278 | None:intergenic | 45.0% | |
| CTATTGCCAAGCATGTGTTG+CGG | - | chr1.1:2604788-2604807 | MS.gene24322:intron | 45.0% | |
| CTCATGAGATGATGCATGCA+TGG | - | chr1.1:2605039-2605058 | MS.gene24322:intron | 45.0% | |
| CTCATGAGCTAGAATCGATC+CGG | + | chr1.1:2605027-2605046 | None:intergenic | 45.0% | |
| CTCGAGGATGAAGAATCAAG+TGG | - | chr1.1:2601457-2601476 | MS.gene24322:intron | 45.0% | |
| CTCTTTACATGCAGCCACAA+GGG | - | chr1.1:2603479-2603498 | MS.gene24322:intron | 45.0% | |
| CTTCACCATATCAAGGTGAC+GGG | - | chr1.1:2605547-2605566 | MS.gene24322:CDS | 45.0% | |
| GAAAGGGTAATTTCCAGACG+TGG | + | chr1.1:2602669-2602688 | None:intergenic | 45.0% | |
| GAAGGGAACATGATAGGAGA+AGG | - | chr1.1:2601599-2601618 | MS.gene24322:CDS | 45.0% | |
| GACGGGATATATTGCCCATA+AGG | - | chr1.1:2603501-2603520 | MS.gene24322:intron | 45.0% | |
| GAGCTTCCTTCCATCCTTAT+GGG | + | chr1.1:2603518-2603537 | None:intergenic | 45.0% | |
| GCTAAACCCCATGGATATCA+CGG | + | chr1.1:2604685-2604704 | None:intergenic | 45.0% | |
| GGCCGCTATCTAAATTGCTT+GGG | - | chr1.1:2602459-2602478 | MS.gene24322:intron | 45.0% | |
| GTGTCTCGATTCTGCTATCA+TGG | - | chr1.1:2603546-2603565 | MS.gene24322:intron | 45.0% | |
| TAAACCCCATGGATATCACG+GGG | + | chr1.1:2604683-2604702 | None:intergenic | 45.0% | |
| TAACCCCACACTTTCTGACT+TGG | + | chr1.1:2602115-2602134 | None:intergenic | 45.0% | |
| TATCATATGCCTGAGACCAG+AGG | - | chr1.1:2604081-2604100 | MS.gene24322:intron | 45.0% | |
| TCAAAACCGCAACACATGCT+TGG | + | chr1.1:2604797-2604816 | None:intergenic | 45.0% | |
| TCCCCAAGCTTCTTCTCAAA+AGG | + | chr1.1:2605427-2605446 | None:intergenic | 45.0% | |
| TCTAACAGTCTGCAACTAGG+AGG | + | chr1.1:2604541-2604560 | None:intergenic | 45.0% | |
| TCTCTTTACATGCAGCCACA+AGG | - | chr1.1:2603478-2603497 | MS.gene24322:intron | 45.0% | |
| TGACAAAAGATAGGGGGGAA+AGG | + | chr1.1:2600942-2600961 | None:intergenic | 45.0% | |
| TGATTGTGACTACGATTGCG+AGG | + | chr1.1:2601268-2601287 | None:intergenic | 45.0% | |
| TGCAGACATCACATTTCGGA+TGG | + | chr1.1:2602718-2602737 | None:intergenic | 45.0% | |
| TGGCCGCTATCTAAATTGCT+TGG | - | chr1.1:2602458-2602477 | MS.gene24322:intron | 45.0% | |
| TGGTCTCAGGCATATGATAG+TGG | + | chr1.1:2604080-2604099 | None:intergenic | 45.0% | |
| TGTTCCTGGTCCGGAATAAT+TGG | - | chr1.1:2602956-2602975 | MS.gene24322:intron | 45.0% | |
| TTTGCGGAAGGGAACATGAT+AGG | - | chr1.1:2601593-2601612 | MS.gene24322:CDS | 45.0% | |
| TTTGTTTCCGTCCATCCCTT+GGG | - | chr1.1:2604953-2604972 | MS.gene24322:intron | 45.0% | |
| ! | ACTCGTTTCTAAGGAGATCG+TGG | - | chr1.1:2601397-2601416 | MS.gene24322:intron | 45.0% |
| ! | CTGGTGTTGGAAAATGTTGC+AGG | - | chr1.1:2599788-2599807 | MS.gene24322:CDS | 45.0% |
| ! | GGCCTGTTGCCGTTAATTTT+TGG | - | chr1.1:2603213-2603232 | MS.gene24322:intron | 45.0% |
| ! | TATGGAGATGGGTTTAGAGC+CGG | - | chr1.1:2605487-2605506 | MS.gene24322:CDS | 45.0% |
| ! | TCGTGCTATTGCGTTGTCTT+TGG | - | chr1.1:2599899-2599918 | MS.gene24322:CDS | 45.0% |
| ! | TGACAGATGGATTTGCGGAA+GGG | - | chr1.1:2601582-2601601 | MS.gene24322:CDS | 45.0% |
| ! | TTGCCAAGTCAGAAAGTGTG+GGG | - | chr1.1:2602109-2602128 | MS.gene24322:intron | 45.0% |
| ! | TTGTTTTCCTGTTCCTGGTC+CGG | - | chr1.1:2602947-2602966 | MS.gene24322:intron | 45.0% |
| ! | TTTGAAACCTGCAATGGAGG+TGG | + | chr1.1:2601222-2601241 | None:intergenic | 45.0% |
| !! | ACAAGCACTGAATGAAGCGA+GGG | - | chr1.1:2603669-2603688 | MS.gene24322:intron | 45.0% |
| !! | CCTCCTTTTGAGAAGAAGCT+TGG | - | chr1.1:2605421-2605440 | MS.gene24322:intron | 45.0% |
| !! | TTTCCCCCTTTCTGGTTTGA+AGG | - | chr1.1:2601016-2601035 | MS.gene24322:intron | 45.0% |
| !!! | CTTGCGAACTGCTTTTTGAC+CGG | + | chr1.1:2605509-2605528 | None:intergenic | 45.0% |
| !!! | AACAAAAATATATTAATTTT+AGG | + | chr1.1:2600444-2600463 | None:intergenic | 5.0% |
| !!! | ACAAAAATATATTAATTTTA+GGG | + | chr1.1:2600443-2600462 | None:intergenic | 5.0% |
| AAACCCCATGGATATCACGG+GGG | + | chr1.1:2604682-2604701 | None:intergenic | 50.0% | |
| ACCTGCAATTGGAGGGAGAA+TGG | - | chr1.1:2603082-2603101 | MS.gene24322:intron | 50.0% | |
| ACTCATACCTGTACCCCATC+GGG | + | chr1.1:2600713-2600732 | None:intergenic | 50.0% | |
| AGAGAGTAGTAGTGTGTCGG+TGG | - | chr1.1:2601493-2601512 | MS.gene24322:intron | 50.0% | |
| AGATGATGCATGCATGGCTG+CGG | - | chr1.1:2605045-2605064 | MS.gene24322:intron | 50.0% | |
| AGTATTTCCCGATGGGGTAC+AGG | - | chr1.1:2600703-2600722 | MS.gene24322:intron | 50.0% | |
| CACACCAATTATTCCGGACC+AGG | + | chr1.1:2602963-2602982 | None:intergenic | 50.0% | |
| CACCCGCACACCAATTATTC+CGG | + | chr1.1:2602969-2602988 | None:intergenic | 50.0% | |
| CAGATTCCAACAAACCCTGC+TGG | - | chr1.1:2603254-2603273 | MS.gene24322:intron | 50.0% | |
| CCGTCACCTTGATATGGTGA+AGG | + | chr1.1:2605549-2605568 | None:intergenic | 50.0% | |
| CCTGCAATTGGAGGGAGAAT+GGG | - | chr1.1:2603083-2603102 | MS.gene24322:intron | 50.0% | |
| CTATTTCCTGTGCCGAGTCT+AGG | + | chr1.1:2604386-2604405 | None:intergenic | 50.0% | |
| CTGTTGTAGCTGTGAGCGAA+TGG | - | chr1.1:2603352-2603371 | MS.gene24322:intron | 50.0% | |
| GCAATATATCCCGTCCCTTG+TGG | + | chr1.1:2603496-2603515 | None:intergenic | 50.0% | |
| GCAATGGAGGTGGTTAGCAA+CGG | + | chr1.1:2601212-2601231 | None:intergenic | 50.0% | |
| GCTGATGAAAAGTTGCTGCC+TGG | + | chr1.1:2605358-2605377 | None:intergenic | 50.0% | |
| GCTGGCTGCAATACTGAGAT+TGG | - | chr1.1:2602432-2602451 | MS.gene24322:intron | 50.0% | |
| GGGAACATGATAGGAGAAGG+AGG | - | chr1.1:2601602-2601621 | MS.gene24322:CDS | 50.0% | |
| GGGGGTCTTCAAACCAGAAA+GGG | - | chr1.1:2601960-2601979 | MS.gene24322:intron | 50.0% | |
| GGGGTACAGGTATGAGTTAG+AGG | - | chr1.1:2600716-2600735 | MS.gene24322:intron | 50.0% | |
| GGGGTCTTCAAACCAGAAAG+GGG | - | chr1.1:2601961-2601980 | MS.gene24322:intron | 50.0% | |
| GGGTCGGTGGTATAGTTTGA+AGG | - | chr1.1:2601547-2601566 | MS.gene24322:CDS | 50.0% | |
| GGGTCTAACAGTCTGCAACT+AGG | + | chr1.1:2604544-2604563 | None:intergenic | 50.0% | |
| GGGTCTTCAAACCAGAAAGG+GGG | - | chr1.1:2601962-2601981 | MS.gene24322:intron | 50.0% | |
| GGTCCGGAATAATTGGTGTG+CGG | - | chr1.1:2602963-2602982 | MS.gene24322:intron | 50.0% | |
| GTCCGGAATAATTGGTGTGC+GGG | - | chr1.1:2602964-2602983 | MS.gene24322:intron | 50.0% | |
| GTTCCGGTGAATGCAGAGAA+CGG | + | chr1.1:2601321-2601340 | None:intergenic | 50.0% | |
| TCACCGTTCTCTGCATTCAC+CGG | - | chr1.1:2601315-2601334 | MS.gene24322:intron | 50.0% | |
| TCCTGTCCTTTGCATCATGG+CGG | - | chr1.1:2601800-2601819 | MS.gene24322:intron | 50.0% | |
| TCTGAGCTTTCTTCTGCACC+AGG | - | chr1.1:2605337-2605356 | MS.gene24322:CDS | 50.0% | |
| TGATGCAAAGGACAGGACCA+AGG | + | chr1.1:2601797-2601816 | None:intergenic | 50.0% | |
| TGATTCTCCCAAGGGATGGA+CGG | + | chr1.1:2604963-2604982 | None:intergenic | 50.0% | |
| TGGGGGTCTTCAAACCAGAA+AGG | - | chr1.1:2601959-2601978 | MS.gene24322:intron | 50.0% | |
| TGGTCCTGTCCTTTGCATCA+TGG | - | chr1.1:2601797-2601816 | MS.gene24322:intron | 50.0% | |
| TTACATGCAGCCACAAGGGA+CGG | - | chr1.1:2603483-2603502 | MS.gene24322:intron | 50.0% | |
| TTCGCTCACAGCTACAACAG+CGG | + | chr1.1:2603352-2603371 | None:intergenic | 50.0% | |
| TTGACGGTGATGAATCCTCG+AGG | - | chr1.1:2601441-2601460 | MS.gene24322:intron | 50.0% | |
| TTGCTAACCACCTCCATTGC+AGG | - | chr1.1:2601212-2601231 | MS.gene24322:intron | 50.0% | |
| TTGGAGTCACCTCCCAAACA+TGG | - | chr1.1:2600654-2600673 | MS.gene24322:intron | 50.0% | |
| TTGTAGCTGTGAGCGAATGG+AGG | - | chr1.1:2603355-2603374 | MS.gene24322:intron | 50.0% | |
| ! | CCCATCTTTTTCCCCCTTTC+TGG | - | chr1.1:2601008-2601027 | MS.gene24322:intron | 50.0% |
| ! | CCCATCTTTTTCCCCCTTTC+TGG | + | chr1.1:2601027-2601008 | None:intergenic | 50.0% |
| ! | CGTTTCTAAGGAGATCGTGG+AGG | - | chr1.1:2601400-2601419 | MS.gene24322:intron | 50.0% |
| ! | CTTTGTTTCCGTCCATCCCT+TGG | - | chr1.1:2604952-2604971 | MS.gene24322:intron | 50.0% |
| ! | GTGACAGATGGATTTGCGGA+AGG | - | chr1.1:2601581-2601600 | MS.gene24322:CDS | 50.0% |
| !! | GACAAGCACTGAATGAAGCG+AGG | - | chr1.1:2603668-2603687 | MS.gene24322:intron | 50.0% |
| !!! | GGTTTTGGCTCACATGTGGT+TGG | - | chr1.1:2605312-2605331 | MS.gene24322:CDS | 50.0% |
| !!! | GTCAGGTTTTGGCTCACATG+TGG | - | chr1.1:2605308-2605327 | MS.gene24322:CDS | 50.0% |
| ACAGCTCCGCCATGATGCAA+AGG | + | chr1.1:2601809-2601828 | None:intergenic | 55.0% | |
| ACCAAGGAAGCTGCAGAGAG+GGG | + | chr1.1:2601781-2601800 | None:intergenic | 55.0% | |
| ACTGAATGAAGCGAGGGAGG+GGG | - | chr1.1:2603675-2603694 | MS.gene24322:intron | 55.0% | |
| AGAAGACCTAGACTCGGCAC+AGG | - | chr1.1:2604377-2604396 | MS.gene24322:intron | 55.0% | |
| CACTGAATGAAGCGAGGGAG+GGG | - | chr1.1:2603674-2603693 | MS.gene24322:intron | 55.0% | |
| CAGCGCGCAGTCAGTTTGTA+TGG | + | chr1.1:2604425-2604444 | None:intergenic | 55.0% | |
| CCCATTCTCCCTCCAATTGC+AGG | + | chr1.1:2603086-2603105 | None:intergenic | 55.0% | |
| CTTCCCCCGTGATATCCATG+GGG | - | chr1.1:2604676-2604695 | MS.gene24322:intron | 55.0% | |
| GACCAAGGAAGCTGCAGAGA+GGG | + | chr1.1:2601782-2601801 | None:intergenic | 55.0% | |
| GCACTGAATGAAGCGAGGGA+GGG | - | chr1.1:2603673-2603692 | MS.gene24322:intron | 55.0% | |
| GCTTCCCCCGTGATATCCAT+GGG | - | chr1.1:2604675-2604694 | MS.gene24322:intron | 55.0% | |
| GGGCCTTCAAACCAGAAAGG+GGG | + | chr1.1:2601022-2601041 | None:intergenic | 55.0% | |
| GGGGCCTTCAAACCAGAAAG+GGG | + | chr1.1:2601023-2601042 | None:intergenic | 55.0% | |
| GGGGCTGATGTGATGTACAC+TGG | - | chr1.1:2600839-2600858 | MS.gene24322:CDS | 55.0% | |
| GGGGGCCTTCAAACCAGAAA+GGG | + | chr1.1:2601024-2601043 | None:intergenic | 55.0% | |
| GTAGGTTGCAAGCACGGCAA+CGG | + | chr1.1:2602509-2602528 | None:intergenic | 55.0% | |
| TACATGCAGCCACAAGGGAC+GGG | - | chr1.1:2603484-2603503 | MS.gene24322:intron | 55.0% | |
| TCCGCCATGATGCAAAGGAC+AGG | + | chr1.1:2601804-2601823 | None:intergenic | 55.0% | |
| TCGCTCACAGCTACAACAGC+GGG | + | chr1.1:2603351-2603370 | None:intergenic | 55.0% | |
| TGCTTCCCCCGTGATATCCA+TGG | - | chr1.1:2604674-2604693 | MS.gene24322:intron | 55.0% | |
| TGGGGGCCTTCAAACCAGAA+AGG | + | chr1.1:2601025-2601044 | None:intergenic | 55.0% | |
| ! | AGCACTGAATGAAGCGAGGG+AGG | - | chr1.1:2603672-2603691 | MS.gene24322:intron | 55.0% |
| ! | CAGTGCTGAGTTCCTCTGAG+AGG | + | chr1.1:2604113-2604132 | None:intergenic | 55.0% |
| AACACCGCCGGAGGAATTGG+CGG | + | chr1.1:2601186-2601205 | None:intergenic | 60.0% | |
| AGGCAGAGTCCTCTGGTCTC+AGG | + | chr1.1:2604093-2604112 | None:intergenic | 60.0% | |
| CACAACACCGCCGGAGGAAT+TGG | + | chr1.1:2601189-2601208 | None:intergenic | 60.0% | |
| CAGAGGACTCTGCCTCTCAG+AGG | - | chr1.1:2604098-2604117 | MS.gene24322:intron | 60.0% | |
| CATGCATGGCTGCGGCTAAC+AGG | - | chr1.1:2605053-2605072 | MS.gene24322:intron | 60.0% | |
| GCACCTTCCGCCAATTCCTC+CGG | - | chr1.1:2601176-2601195 | MS.gene24322:intron | 60.0% | |
| GGACCAAGGAAGCTGCAGAG+AGG | + | chr1.1:2601783-2601802 | None:intergenic | 60.0% | |
| TACGTGTGCGTGCGTGTGTG+TGG | - | chr1.1:2602073-2602092 | MS.gene24322:intron | 60.0% | |
| TAGCAACGGCACAACACCGC+CGG | + | chr1.1:2601198-2601217 | None:intergenic | 60.0% | |
| TCCCCTCTCTGCAGCTTCCT+TGG | - | chr1.1:2601777-2601796 | MS.gene24322:intron | 60.0% | |
| ! | CTCTGAGAGGCAGAGTCCTC+TGG | + | chr1.1:2604100-2604119 | None:intergenic | 60.0% |
| !! | GCACGGCAACGGAAGCATTC+AGG | + | chr1.1:2602498-2602517 | None:intergenic | 60.0% |
| CACCCTATGTTCGCCGACGG+CGG | + | chr1.1:2601527-2601546 | None:intergenic | 65.0% | |
| CCCCACCCTATGTTCGCCGA+CGG | + | chr1.1:2601530-2601549 | None:intergenic | 65.0% | |
| CCGTCGGCGAACATAGGGTG+GGG | - | chr1.1:2601527-2601546 | MS.gene24322:CDS | 65.0% | |
| CCTTCCGCCAATTCCTCCGG+CGG | - | chr1.1:2601179-2601198 | MS.gene24322:intron | 65.0% | |
| CGAACATAGGGTGGGGTCGG+TGG | - | chr1.1:2601534-2601553 | MS.gene24322:CDS | 65.0% | |
| CGGCGAACATAGGGTGGGGT+CGG | - | chr1.1:2601531-2601550 | MS.gene24322:CDS | 65.0% | |
| GCCGTCGGCGAACATAGGGT+GGG | - | chr1.1:2601526-2601545 | MS.gene24322:CDS | 65.0% | |
| CAACGGCACAACACCGCCGG+AGG | + | chr1.1:2601195-2601214 | None:intergenic | 70.0% | |
| CCGCCGGAGGAATTGGCGGA+AGG | + | chr1.1:2601182-2601201 | None:intergenic | 70.0% | |
| CCTATGTTCGCCGACGGCGG+CGG | + | chr1.1:2601524-2601543 | None:intergenic | 70.0% | |
| CGCCGCCGTCGGCGAACATA+GGG | - | chr1.1:2601522-2601541 | MS.gene24322:intron | 70.0% | |
| CGCCGTCGGCGAACATAGGG+TGG | - | chr1.1:2601525-2601544 | MS.gene24322:CDS | 70.0% | |
| CCGCCGCCGTCGGCGAACAT+AGG | - | chr1.1:2601521-2601540 | MS.gene24322:intron | 75.0% | |
| GGTGGAGTCACCGCCGCCGT+CGG | - | chr1.1:2601511-2601530 | MS.gene24322:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 2599645 | 2605585 | 2599645 | ID=MS.gene24322 |
| chr1.1 | mRNA | 2599645 | 2605585 | 2599645 | ID=MS.gene24322.t1;Parent=MS.gene24322 |
| chr1.1 | exon | 2605484 | 2605585 | 2605484 | ID=MS.gene24322.t1.exon1;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2605484 | 2605585 | 2605484 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2605276 | 2605366 | 2605276 | ID=MS.gene24322.t1.exon2;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2605276 | 2605366 | 2605276 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2604506 | 2604638 | 2604506 | ID=MS.gene24322.t1.exon3;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2604506 | 2604638 | 2604506 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2602685 | 2602805 | 2602685 | ID=MS.gene24322.t1.exon4;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2602685 | 2602805 | 2602685 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2602485 | 2602568 | 2602485 | ID=MS.gene24322.t1.exon5;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2602485 | 2602568 | 2602485 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2601854 | 2601973 | 2601854 | ID=MS.gene24322.t1.exon6;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2601854 | 2601973 | 2601854 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2601525 | 2601737 | 2601525 | ID=MS.gene24322.t1.exon7;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2601525 | 2601737 | 2601525 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2601099 | 2601155 | 2601099 | ID=MS.gene24322.t1.exon8;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2601099 | 2601155 | 2601099 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2600747 | 2600859 | 2600747 | ID=MS.gene24322.t1.exon9;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2600747 | 2600859 | 2600747 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2600156 | 2600214 | 2600156 | ID=MS.gene24322.t1.exon10;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2600156 | 2600214 | 2600156 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| chr1.1 | exon | 2599645 | 2599961 | 2599645 | ID=MS.gene24322.t1.exon11;Parent=MS.gene24322.t1 |
| chr1.1 | CDS | 2599645 | 2599961 | 2599645 | ID=cds.MS.gene24322.t1;Parent=MS.gene24322.t1 |
| Gene Sequence |
| Protein sequence |
