AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24424

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24424.t1 MTR_1g047060 54.000 100 37 3 110 207 1 93 1.03e-26 99.8
MS.gene24424.t1 MTR_5g012080 32.704 159 82 8 4 146 7 156 2.86e-16 77.4
MS.gene24424.t1 MTR_2g080010 33.544 158 93 5 4 155 15 166 2.04e-15 75.1
MS.gene24424.t1 MTR_4g094302 29.747 158 87 6 4 147 11 158 6.47e-15 71.2
MS.gene24424.t1 MTR_4g089135 35.075 134 76 4 4 132 15 142 3.22e-14 71.6
MS.gene24424.t1 MTR_3g109340 32.484 157 87 6 2 146 20 169 3.82e-14 71.2
MS.gene24424.t1 MTR_2g093810 31.056 161 83 6 4 145 14 165 4.96e-14 70.9
MS.gene24424.t1 MTR_4g036030 32.258 155 86 7 4 146 7 154 5.12e-14 70.9
MS.gene24424.t1 MTR_4g094302 32.558 129 78 4 4 132 11 130 5.63e-14 68.2
MS.gene24424.t1 MTR_7g100990 32.500 160 82 7 4 145 11 162 8.22e-14 70.1
MS.gene24424.t1 MTR_2g064090 31.646 158 85 8 4 146 6 155 9.93e-14 70.1
MS.gene24424.t1 MTR_1g008740 32.911 158 86 7 2 146 25 175 1.00e-13 70.1
MS.gene24424.t1 MTR_1g008740 32.911 158 86 7 2 146 11 161 1.02e-13 70.1
MS.gene24424.t1 MTR_7g105170 31.138 167 89 8 1 146 1 162 3.08e-13 67.8
MS.gene24424.t1 MTR_3g109340 31.410 156 89 6 2 146 20 168 4.25e-13 68.2
MS.gene24424.t1 MTR_3g096140 27.835 194 115 7 2 179 5 189 4.46e-13 67.8
MS.gene24424.t1 MTR_3g064580 31.013 158 86 8 4 146 6 155 4.48e-13 68.9
MS.gene24424.t1 MTR_8g076110 32.258 155 86 7 4 146 6 153 4.73e-13 67.8
MS.gene24424.t1 MTR_4g035590 30.460 174 99 9 4 164 8 172 4.99e-13 68.2
MS.gene24424.t1 MTR_2g062730 28.042 189 111 7 4 178 10 187 5.14e-13 68.2
MS.gene24424.t1 MTR_7g097090 33.548 155 81 7 4 146 10 154 5.95e-13 67.4
MS.gene24424.t1 MTR_2g086880 29.452 146 89 6 6 145 20 157 7.92e-13 68.2
MS.gene24424.t1 MTR_3g093040 31.056 161 81 10 4 146 108 256 8.33e-13 67.0
MS.gene24424.t1 MTR_2g086880 28.767 146 90 6 6 145 20 157 1.11e-12 67.4
MS.gene24424.t1 MTR_3g096140 27.835 194 115 7 2 179 5 189 1.21e-12 67.0
MS.gene24424.t1 MTR_8g093790 31.293 147 79 7 4 147 10 137 1.41e-12 64.7
MS.gene24424.t1 MTR_5g040420 28.144 167 90 7 2 146 12 170 1.52e-12 67.0
MS.gene24424.t1 MTR_8g059170 31.210 157 86 6 4 146 14 162 2.20e-12 66.2
MS.gene24424.t1 MTR_8g023900 29.677 155 88 7 4 145 12 158 2.82e-12 66.2
MS.gene24424.t1 MTR_8g023900 29.545 176 99 8 7 168 196 360 6.85e-12 65.1
MS.gene24424.t1 MTR_8g467490 27.711 166 93 6 2 146 12 171 2.95e-12 65.9
MS.gene24424.t1 MTR_2g079990 30.573 157 85 7 4 146 16 162 7.09e-12 64.7
MS.gene24424.t1 MTR_1g090720 31.902 163 83 7 4 146 42 196 4.27e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24424.t1 AT2G24430 36.076 158 80 7 2 146 14 163 1.06e-16 78.2
MS.gene24424.t1 AT2G24430 36.076 158 80 7 2 146 14 163 1.06e-16 78.2
MS.gene24424.t1 AT2G27300 27.751 209 125 8 4 197 14 211 1.21e-15 75.5
MS.gene24424.t1 AT1G71930 31.646 158 89 6 4 149 9 159 5.77e-15 73.6
MS.gene24424.t1 AT1G71930 31.646 158 89 6 4 149 9 159 5.77e-15 73.6
MS.gene24424.t1 AT5G39610 32.903 155 86 6 4 146 20 168 8.04e-15 72.8
MS.gene24424.t1 AT1G76420 32.500 160 81 7 4 147 22 170 1.35e-14 72.4
MS.gene24424.t1 AT1G01720 31.056 161 84 6 4 147 7 157 1.82e-14 71.6
MS.gene24424.t1 AT1G26870 31.613 155 91 5 2 149 14 160 2.51e-14 72.4
MS.gene24424.t1 AT4G17980 31.646 158 86 6 4 145 6 157 3.53e-14 70.5
MS.gene24424.t1 AT4G17980 31.646 158 86 6 4 145 6 157 5.72e-14 70.5
MS.gene24424.t1 AT5G66300 30.323 155 90 6 4 146 12 160 1.15e-13 69.7
MS.gene24424.t1 AT3G15500 32.484 157 82 8 4 146 14 160 1.31e-13 69.7
MS.gene24424.t1 AT3G29035 30.968 155 89 5 4 146 24 172 1.53e-13 69.3
MS.gene24424.t1 AT5G22290 27.320 194 110 8 6 179 23 205 1.64e-13 69.3
MS.gene24424.t1 AT5G08790 32.099 162 82 7 4 147 7 158 2.01e-13 68.6
MS.gene24424.t1 AT4G10350 30.387 181 94 10 4 168 9 173 2.02e-13 69.3
MS.gene24424.t1 AT4G35580 30.675 163 91 8 1 149 6 160 2.07e-13 69.7
MS.gene24424.t1 AT4G35580 30.675 163 91 8 1 149 6 160 2.17e-13 69.7
MS.gene24424.t1 AT4G35580 30.675 163 91 8 1 149 6 160 2.29e-13 69.7
MS.gene24424.t1 AT5G17260 31.013 158 86 7 4 146 6 155 3.43e-13 68.9
MS.gene24424.t1 AT3G44290 26.846 149 89 6 6 145 16 153 3.63e-13 67.4
MS.gene24424.t1 AT1G52890 32.278 158 81 8 4 146 14 160 4.09e-13 68.2
MS.gene24424.t1 AT5G63790 32.515 163 80 8 4 147 50 201 5.09e-13 67.8
MS.gene24424.t1 AT5G63790 32.515 163 80 8 4 147 60 211 6.09e-13 67.8
MS.gene24424.t1 AT1G54330 31.818 154 86 7 4 146 6 151 6.80e-13 67.4
MS.gene24424.t1 AT3G44290 26.846 149 89 6 6 145 16 153 9.68e-13 67.4
MS.gene24424.t1 AT1G77450 31.875 160 83 7 4 147 10 159 1.40e-12 65.9
MS.gene24424.t1 AT2G43000 28.289 152 92 5 6 146 20 165 2.63e-12 65.5
MS.gene24424.t1 AT4G27410 30.128 156 87 6 4 146 14 160 2.76e-12 65.5
MS.gene24424.t1 AT1G32510 29.268 164 88 7 3 145 5 161 4.14e-12 65.1
MS.gene24424.t1 AT3G15510 31.579 152 92 5 10 155 23 168 6.30e-12 65.1
MS.gene24424.t1 AT5G46590 30.625 160 83 8 4 145 6 155 6.58e-12 64.3
MS.gene24424.t1 AT5G13180 28.947 152 92 5 4 146 14 158 6.79e-12 63.9
MS.gene24424.t1 AT3G03200 31.013 158 86 7 4 146 6 155 7.11e-12 65.1

Find 50 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAATTATGCTTTCAATTA+TGG 0.116873 1.1:-3882536 MS.gene24424:CDS
CAATGGTTCTGACCTGATTC+AGG 0.237830 1.1:-3883724 MS.gene24424:CDS
GGCACTGTAAGACGGGATTT+TGG 0.254019 1.1:-3883590 MS.gene24424:CDS
CCTTGGGTGACGAAAGAAAA+AGG 0.332405 1.1:+3883653 None:intergenic
TTGGATCTGGATGCTGAGTT+TGG 0.378607 1.1:-3883261 MS.gene24424:CDS
ATTGAAAGCATAATTTGCTC+AGG 0.423054 1.1:+3882541 None:intergenic
ACAGGTTCAGCTCCTGAATC+AGG 0.430846 1.1:+3883712 None:intergenic
CCTCATCTGCTCATCAACTT+TGG 0.458061 1.1:+3883611 None:intergenic
GAAGAGGCTCAGAATTTCAA+TGG 0.469135 1.1:-3883741 MS.gene24424:CDS
GCAATTCAAACGGATCATAC+TGG 0.470273 1.1:+3883688 None:intergenic
ACTCCATTCGTCTTATCAGC+AGG 0.475127 1.1:+3883201 None:intergenic
GTTGATGAAGGCGATGCTGC+TGG 0.479728 1.1:-3883231 MS.gene24424:CDS
GTGAAGCAGCAAAATTCCCT+TGG 0.487125 1.1:+3883636 None:intergenic
CTGCCCACCAGAGTTGGATC+TGG 0.490020 1.1:-3883274 MS.gene24424:CDS
TGGAGTTACTCAGAAACCTA+TGG 0.493323 1.1:-3883184 MS.gene24424:CDS
GGAGTAAAACGCAATTCAAA+CGG 0.503611 1.1:+3883678 None:intergenic
ACTAGTGCTGCTGCTGAGCA+AGG 0.517825 1.1:-3883141 MS.gene24424:CDS
CAGATGAGGCACTGTAAGAC+GGG 0.518000 1.1:-3883597 MS.gene24424:CDS
CAAACGGATCATACTGGTAC+AGG 0.523566 1.1:+3883694 None:intergenic
TTTGGAGCTATAGTTGATGA+AGG 0.531036 1.1:-3883243 MS.gene24424:CDS
AGAATGCCATCAAAACTAGC+TGG 0.534697 1.1:-3883470 MS.gene24424:CDS
GCTGTTCGAGACATTACTGT+TGG 0.540803 1.1:-3883555 MS.gene24424:CDS
CACACTTGCTAACAATCCTC+AGG 0.550460 1.1:-3883433 MS.gene24424:intron
TTGAAAGCATAATTTGCTCA+GGG 0.552658 1.1:+3882542 None:intergenic
GGAGTTACTCAGAAACCTAT+GGG 0.559803 1.1:-3883183 MS.gene24424:CDS
TGAAGCAGCAAAATTCCCTT+GGG 0.560910 1.1:+3883637 None:intergenic
CCAAAGTTGATGAGCAGATG+AGG 0.562182 1.1:-3883611 MS.gene24424:CDS
TGGCAAGGTAGTGGCTAACA+AGG 0.563537 1.1:+3883775 None:intergenic
AAAACAAATAAATTTATACA+AGG 0.565586 1.1:+3882488 None:intergenic
GCATCCAGATCCAACTCTGG+TGG 0.565861 1.1:+3883270 None:intergenic
GTTTGACTGCCCACCAGAGT+TGG 0.567918 1.1:-3883280 MS.gene24424:CDS
CTAACAAGGAGCTCATCAGA+AGG 0.575725 1.1:+3883789 None:intergenic
TGACTATGCTGTCTTGCACA+TGG 0.580894 1.1:-3882575 MS.gene24424:CDS
TAACAAGGAGCTCATCAGAA+GGG 0.587558 1.1:+3883790 None:intergenic
GACCCTGCTGATAAGACGAA+TGG 0.589128 1.1:-3883204 MS.gene24424:CDS
AGTGCTGCTGCTGAGCAAGG+CGG 0.590822 1.1:-3883138 MS.gene24424:CDS
GCAGATGAGGCACTGTAAGA+CGG 0.594345 1.1:-3883598 MS.gene24424:CDS
TCAGCATCCAGATCCAACTC+TGG 0.601777 1.1:+3883267 None:intergenic
GCAATGGAATTGCTTCCACC+TGG 0.606391 1.1:-3883825 MS.gene24424:CDS
CTCCATTCGTCTTATCAGCA+GGG 0.617597 1.1:+3883202 None:intergenic
AACAAGGAGCTCATCAGAAG+GGG 0.621007 1.1:+3883791 None:intergenic
CATCCAGATCCAACTCTGGT+GGG 0.645528 1.1:+3883271 None:intergenic
TGGAACTGATAACATGTTGG+TGG 0.647517 1.1:-3883535 MS.gene24424:CDS
TGTTGGAACTGATAACATGT+TGG 0.651961 1.1:-3883538 MS.gene24424:CDS
GAAGGGGCGAAGTCAACACC+AGG 0.655180 1.1:+3883807 None:intergenic
GGGGCGAAGTCAACACCAGG+TGG 0.667873 1.1:+3883810 None:intergenic
TGAAAGCATAATTTGCTCAG+GGG 0.670703 1.1:+3882543 None:intergenic
GGAACTGATAACATGTTGGT+GGG 0.673386 1.1:-3883534 MS.gene24424:CDS
GAGTTACTCAGAAACCTATG+GGG 0.687052 1.1:-3883182 MS.gene24424:CDS
AGTTACTCAGAAACCTATGG+GGG 0.734801 1.1:-3883181 MS.gene24424:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAAAATTATTATGC+AGG - chr1.1:3882998-3883017 MS.gene24424:intron 10.0%
!! AACGTTAACTAATAAAAAAA+AGG + chr1.1:3883510-3883529 None:intergenic 15.0%
!! AATATAAAGAGAGATCAAAA+TGG + chr1.1:3883260-3883279 None:intergenic 20.0%
!! ATAAGATCAACAACATTAAT+TGG + chr1.1:3883285-3883304 None:intergenic 20.0%
!! TCAAGGATTAATTAATGTAT+TGG - chr1.1:3882957-3882976 MS.gene24424:intron 20.0%
!!! ATTTTATAATGAAGACAAGA+AGG - chr1.1:3883658-3883677 MS.gene24424:CDS 20.0%
!!! TCTCTTTTTATGTTCTATAT+AGG - chr1.1:3882819-3882838 MS.gene24424:intron 20.0%
! AAAAAATACCATCACATGAA+TGG + chr1.1:3883351-3883370 None:intergenic 25.0%
! GCAAATTATGCTTTCAATTA+TGG - chr1.1:3883787-3883806 MS.gene24424:CDS 25.0%
!!! TGAATTGCTTTGTTTGTTTT+TGG - chr1.1:3883695-3883714 MS.gene24424:CDS 25.0%
CTCTGTTCATTATTTCATCA+AGG - chr1.1:3882940-3882959 MS.gene24424:intron 30.0%
CTTGATGAAATAATGAACAG+AGG + chr1.1:3882942-3882961 None:intergenic 30.0%
! TCAAATGTCACAGATTTTGA+AGG - chr1.1:3883212-3883231 MS.gene24424:CDS 30.0%
!! ATTGAAAGCATAATTTGCTC+AGG + chr1.1:3883785-3883804 None:intergenic 30.0%
!! TTGAAAGCATAATTTGCTCA+GGG + chr1.1:3883784-3883803 None:intergenic 30.0%
!!! GTTTGTTTTTGGTGTTTATC+AGG - chr1.1:3883706-3883725 MS.gene24424:CDS 30.0%
AACTCAATCCATTCATGTGA+TGG - chr1.1:3883340-3883359 MS.gene24424:intron 35.0%
ACATTCAGTAGCAAAGATTG+AGG + chr1.1:3883379-3883398 None:intergenic 35.0%
GGAGTAAAACGCAATTCAAA+CGG + chr1.1:3882648-3882667 None:intergenic 35.0%
TGCCAACAAAAACAATGAAG+AGG - chr1.1:3882566-3882585 MS.gene24424:CDS 35.0%
TGTTGGAACTGATAACATGT+TGG - chr1.1:3882785-3882804 MS.gene24424:intron 35.0%
!! TGAAAGCATAATTTGCTCAG+GGG + chr1.1:3883783-3883802 None:intergenic 35.0%
!! TTTGGAGCTATAGTTGATGA+AGG - chr1.1:3883080-3883099 MS.gene24424:intron 35.0%
!!! AGCCTCTTCATTGTTTTTGT+TGG + chr1.1:3882571-3882590 None:intergenic 35.0%
!!! CTTCATTGTTTTTGTTGGCA+AGG + chr1.1:3882566-3882585 None:intergenic 35.0%
AGAATGCCATCAAAACTAGC+TGG - chr1.1:3882853-3882872 MS.gene24424:intron 40.0%
AGGACGTGATTTGAAGAATC+TGG + chr1.1:3883543-3883562 None:intergenic 40.0%
AGTTACTCAGAAACCTATGG+GGG - chr1.1:3883142-3883161 MS.gene24424:CDS 40.0%
GAAGAGGCTCAGAATTTCAA+TGG - chr1.1:3882582-3882601 MS.gene24424:CDS 40.0%
GAGTTACTCAGAAACCTATG+GGG - chr1.1:3883141-3883160 MS.gene24424:CDS 40.0%
GCAATTCAAACGGATCATAC+TGG + chr1.1:3882638-3882657 None:intergenic 40.0%
GGAACTGATAACATGTTGGT+GGG - chr1.1:3882789-3882808 MS.gene24424:intron 40.0%
GGAGTTACTCAGAAACCTAT+GGG - chr1.1:3883140-3883159 MS.gene24424:CDS 40.0%
TAACAAGGAGCTCATCAGAA+GGG + chr1.1:3882536-3882555 None:intergenic 40.0%
TGAAGCAGCAAAATTCCCTT+GGG + chr1.1:3882689-3882708 None:intergenic 40.0%
TGGAACTGATAACATGTTGG+TGG - chr1.1:3882788-3882807 MS.gene24424:intron 40.0%
TGGAGTTACTCAGAAACCTA+TGG - chr1.1:3883139-3883158 MS.gene24424:CDS 40.0%
TTGCTAACAATCCTCAGGTA+TGG - chr1.1:3882895-3882914 MS.gene24424:intron 40.0%
! ACGGGATTTTGGATGCAAAA+GGG - chr1.1:3882744-3882763 MS.gene24424:intron 40.0%
! CTTTTTCTTTCGTCACCCAA+GGG - chr1.1:3882671-3882690 MS.gene24424:intron 40.0%
!! AGTTTTGATGGCATTCTGAG+CGG + chr1.1:3882850-3882869 None:intergenic 40.0%
!! TGTTTTTGTTGGCAAGGTAG+TGG + chr1.1:3882560-3882579 None:intergenic 40.0%
!!! CATAGTCCAGCTAGTTTTGA+TGG + chr1.1:3882862-3882881 None:intergenic 40.0%
AACAAGGAGCTCATCAGAAG+GGG + chr1.1:3882535-3882554 None:intergenic 45.0%
ACTCCATTCGTCTTATCAGC+AGG + chr1.1:3883125-3883144 None:intergenic 45.0%
CAAACGGATCATACTGGTAC+AGG + chr1.1:3882632-3882651 None:intergenic 45.0%
CCTCATCTGCTCATCAACTT+TGG + chr1.1:3882715-3882734 None:intergenic 45.0%
CCTTGGGTGACGAAAGAAAA+AGG + chr1.1:3882673-3882692 None:intergenic 45.0%
CTAACAAGGAGCTCATCAGA+AGG + chr1.1:3882537-3882556 None:intergenic 45.0%
CTCCATTCGTCTTATCAGCA+GGG + chr1.1:3883124-3883143 None:intergenic 45.0%
GCTGTTCGAGACATTACTGT+TGG - chr1.1:3882768-3882787 MS.gene24424:intron 45.0%
GGGTGACGAAAGAAAAAGGA+CGG + chr1.1:3882669-3882688 None:intergenic 45.0%
GTGAAGCAGCAAAATTCCCT+TGG + chr1.1:3882690-3882709 None:intergenic 45.0%
TGACTATGCTGTCTTGCACA+TGG - chr1.1:3883748-3883767 MS.gene24424:CDS 45.0%
TTGGATCTGGATGCTGAGTT+TGG - chr1.1:3883062-3883081 MS.gene24424:intron 45.0%
TTTCGCAAATGCCATACCTG+AGG + chr1.1:3882909-3882928 None:intergenic 45.0%
! CACACTTGCTAACAATCCTC+AGG - chr1.1:3882890-3882909 MS.gene24424:intron 45.0%
! CCTTTTTCTTTCGTCACCCA+AGG - chr1.1:3882670-3882689 MS.gene24424:intron 45.0%
! CGGGATTTTGGATGCAAAAG+GGG - chr1.1:3882745-3882764 MS.gene24424:intron 45.0%
! GACGGGATTTTGGATGCAAA+AGG - chr1.1:3882743-3882762 MS.gene24424:intron 45.0%
! GGGATTTTGGATGCAAAAGG+GGG - chr1.1:3882746-3882765 MS.gene24424:intron 45.0%
!! CAATGGTTCTGACCTGATTC+AGG - chr1.1:3882599-3882618 MS.gene24424:intron 45.0%
!! CCAAAGTTGATGAGCAGATG+AGG - chr1.1:3882712-3882731 MS.gene24424:intron 45.0%
!!! AGATTTTGAAGGCACTCTGC+AGG - chr1.1:3883223-3883242 MS.gene24424:CDS 45.0%
!! AAATTTAAAGAAAAATAAAA+AGG + chr1.1:3883563-3883582 None:intergenic 5.0%
ACAGGTTCAGCTCCTGAATC+AGG + chr1.1:3882614-3882633 None:intergenic 50.0%
CATCCAGATCCAACTCTGGT+GGG + chr1.1:3883055-3883074 None:intergenic 50.0%
GACCCTGCTGATAAGACGAA+TGG - chr1.1:3883119-3883138 MS.gene24424:CDS 50.0%
TCAGCATCCAGATCCAACTC+TGG + chr1.1:3883059-3883078 None:intergenic 50.0%
! GGCACTGTAAGACGGGATTT+TGG - chr1.1:3882733-3882752 MS.gene24424:intron 50.0%
! TGGCAAGGTAGTGGCTAACA+AGG + chr1.1:3882551-3882570 None:intergenic 50.0%
!! CAGATGAGGCACTGTAAGAC+GGG - chr1.1:3882726-3882745 MS.gene24424:intron 50.0%
!! GCAGATGAGGCACTGTAAGA+CGG - chr1.1:3882725-3882744 MS.gene24424:intron 50.0%
ACTCAGAAACCTATGGGGGC+TGG - chr1.1:3883146-3883165 MS.gene24424:CDS 55.0%
CTCAGAAACCTATGGGGGCT+GGG - chr1.1:3883147-3883166 MS.gene24424:CDS 55.0%
GCATCCAGATCCAACTCTGG+TGG + chr1.1:3883056-3883075 None:intergenic 55.0%
GTTTGACTGCCCACCAGAGT+TGG - chr1.1:3883043-3883062 MS.gene24424:intron 55.0%
TCAGAAACCTATGGGGGCTG+GGG - chr1.1:3883148-3883167 MS.gene24424:CDS 55.0%
! ACTAGTGCTGCTGCTGAGCA+AGG - chr1.1:3883182-3883201 MS.gene24424:CDS 55.0%
! GTTGATGAAGGCGATGCTGC+TGG - chr1.1:3883092-3883111 MS.gene24424:intron 55.0%
AAACCTATGGGGGCTGGGGA+TGG - chr1.1:3883152-3883171 MS.gene24424:CDS 60.0%
AACCTATGGGGGCTGGGGAT+GGG - chr1.1:3883153-3883172 MS.gene24424:CDS 60.0%
CTGCCCACCAGAGTTGGATC+TGG - chr1.1:3883049-3883068 MS.gene24424:intron 60.0%
GAAGGGGCGAAGTCAACACC+AGG + chr1.1:3882519-3882538 None:intergenic 60.0%
! AGTGCTGCTGCTGAGCAAGG+CGG - chr1.1:3883185-3883204 MS.gene24424:CDS 60.0%
ACCTATGGGGGCTGGGGATG+GGG - chr1.1:3883154-3883173 MS.gene24424:CDS 65.0%
GGGGCGAAGTCAACACCAGG+TGG + chr1.1:3882516-3882535 None:intergenic 65.0%
ATGGGGGCTGGGGATGGGGC+TGG - chr1.1:3883158-3883177 MS.gene24424:CDS 75.0%
GCCCCATCCCCAGCCCCCAT+AGG + chr1.1:3883158-3883177 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 3882501 3883844 3882501 ID=MS.gene24424
chr1.1 mRNA 3882501 3883844 3882501 ID=MS.gene24424.t1;Parent=MS.gene24424
chr1.1 exon 3883434 3883844 3883434 ID=MS.gene24424.t1.exon1;Parent=MS.gene24424.t1
chr1.1 CDS 3883434 3883844 3883434 ID=cds.MS.gene24424.t1;Parent=MS.gene24424.t1
chr1.1 exon 3883101 3883325 3883101 ID=MS.gene24424.t1.exon2;Parent=MS.gene24424.t1
chr1.1 CDS 3883101 3883325 3883101 ID=cds.MS.gene24424.t1;Parent=MS.gene24424.t1
chr1.1 exon 3882501 3882617 3882501 ID=MS.gene24424.t1.exon3;Parent=MS.gene24424.t1
chr1.1 CDS 3882501 3882617 3882501 ID=cds.MS.gene24424.t1;Parent=MS.gene24424.t1
Gene Sequence

>MS.gene24424

ATGGAATTGCTTCCACCTGGTGTTGACTTCGCCCCTTCTGATGAGCTCCTTGTTAGCCACTACCTTGCCAACAAAAACAATGAAGAGGCTCAGAATTTCAATGGTTCTGACCTGATTCAGGAGCTGAACCTGTACCAGTATGATCCGTTTGAATTGCGTTTTACTCCGTCCTTTTTCTTTCGTCACCCAAGGGAATTTTGCTGCTTCACTGCCAAAGTTGATGAGCAGATGAGGCACTGTAAGACGGGATTTTGGATGCAAAAGGGGGCTGTTCGAGACATTACTGTTGGAACTGATAACATGTTGGTGGGAAAGAAGTCTCTTTTTATGTTCTATATAGGAAATTCCGCTCAGAATGCCATCAAAACTAGCTGGACTATGTACGAGTACACACTTGCTAACAATCCTCAGGTATGGCATTTGCGAAAACTAACTTTTCCTCTGTTCATTATTTCATCAAGGATTAATTAATGTATTGGCAACTAGTAATTGTTTTTTATTTTTAAAATTATTATGCAGGCTCGTTTTGTTGTTTGTCGTGTGTTTGACTGCCCACCAGAGTTGGATCTGGATGCTGAGTTTGGAGCTATAGTTGATGAAGGCGATGCTGCTGGAGATGACCCTGCTGATAAGACGAATGGAGTTACTCAGAAACCTATGGGGGCTGGGGATGGGGCTGGTACTAGTGCTGCTGCTGAGCAAGGCGGTGCTTCAAATGTCACAGATTTTGAAGGCACTCTGCAGGTAAAATATATTCCATTTTGATCTCTCTTTATATTAACCAATTAATGTTGTTGATCTTATTTGCAACTGATTCTTTAAAATTTCAAAAATTTTACAACTCAATCCATTCATGTGATGGTATTTTTTGATTGCCTCAATCTTTGCTACTGAATGTAACATGTCAAAATGTCAATTGTATGTATCACTCTACACATGTATTTTTATTTTTATTTTTGTGTAGAAATTAAGTTATAATTCTCAAAACATATTCTTCAAATCACGTCCTTTTTTTTATTAGTTAACGTTACTATTCTTACCAGATTCTTCAAATCACGTCCTTTTTATTTTTCTTTAAATTTTTTGCTATGATAAATTCATTATTATTTTTTTTGTCGTTGTCGTTGTCACTTTTTGACAATGCAAGTTTTCATTTCATTTTATAATGAAGACAAGAAGGTATTGCTGAAGTATTGAATTGCTTTGTTTGTTTTTGGTGTTTATCAGGCGAGTTATGCAACATTTCTTGACTATGCTGTCTTGCACATGGAAGCTATGACCCCTGAGCAAATTATGCTTTCAATTATGGATGAAGATTTTCTTGAGATTGCTGACCTTGTATAA
Protein sequence

>MS.gene24424.t1

MELLPPGVDFAPSDELLVSHYLANKNNEEAQNFNGSDLIQELNLYQYDPFELRFTPSFFFRHPREFCCFTAKVDEQMRHCKTGFWMQKGAVRDITVGTDNMLVGKKSLFMFYIGNSAQNAIKTSWTMYEYTLANNPQARFVVCRVFDCPPELDLDAEFGAIVDEGDAAGDDPADKTNGVTQKPMGAGDGAGTSAAAEQGGASNVTDFEGTLQASYATFLDYAVLHMEAMTPEQIMLSIMDEDFLEIADLV