Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25003.t1 | XP_013444514.1 | 81.8 | 400 | 36 | 3 | 1 | 363 | 1 | 400 | 6.90E-181 | 643.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25003.t1 | F4JN35 | 56.6 | 159 | 60 | 4 | 4 | 156 | 8 | 163 | 2.3e-44 | 181.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25003.t1 | G7ZZI3 | 81.8 | 400 | 36 | 3 | 1 | 363 | 1 | 400 | 5.0e-181 | 643.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene25003.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25003.t1 | MTR_8g023840 | 81.750 | 400 | 36 | 3 | 1 | 363 | 1 | 400 | 0.0 | 635 |
MS.gene25003.t1 | MTR_8g023860 | 62.836 | 409 | 97 | 6 | 6 | 361 | 13 | 419 | 7.33e-168 | 475 |
MS.gene25003.t1 | MTR_8g023930 | 66.917 | 266 | 78 | 2 | 5 | 260 | 24 | 289 | 3.77e-121 | 358 |
MS.gene25003.t1 | MTR_8g023900 | 61.672 | 287 | 94 | 3 | 1 | 271 | 184 | 470 | 2.04e-118 | 351 |
MS.gene25003.t1 | MTR_8g023900 | 66.486 | 185 | 53 | 3 | 1 | 176 | 1 | 185 | 3.64e-80 | 253 |
MS.gene25003.t1 | MTR_8g023880 | 42.049 | 283 | 127 | 10 | 2 | 266 | 4 | 267 | 1.15e-55 | 183 |
MS.gene25003.t1 | MTR_3g093040 | 52.326 | 172 | 69 | 6 | 4 | 169 | 107 | 271 | 9.21e-51 | 172 |
MS.gene25003.t1 | MTR_3g093050 | 53.704 | 162 | 66 | 5 | 3 | 158 | 20 | 178 | 6.10e-49 | 174 |
MS.gene25003.t1 | MTR_5g069030 | 54.717 | 159 | 63 | 4 | 3 | 155 | 23 | 178 | 6.58e-49 | 174 |
MS.gene25003.t1 | MTR_3g093050 | 53.704 | 162 | 66 | 5 | 3 | 158 | 20 | 178 | 1.74e-48 | 173 |
MS.gene25003.t1 | MTR_2g086880 | 46.927 | 179 | 87 | 6 | 5 | 182 | 19 | 190 | 1.90e-43 | 157 |
MS.gene25003.t1 | MTR_2g086880 | 47.429 | 175 | 84 | 6 | 5 | 178 | 19 | 186 | 1.94e-43 | 159 |
MS.gene25003.t1 | MTR_6g477900 | 51.613 | 155 | 66 | 5 | 4 | 152 | 5 | 156 | 2.11e-43 | 150 |
MS.gene25003.t1 | MTR_2g064090 | 49.045 | 157 | 70 | 4 | 4 | 153 | 5 | 158 | 1.99e-42 | 151 |
MS.gene25003.t1 | MTR_3g064580 | 46.448 | 183 | 88 | 5 | 4 | 179 | 5 | 184 | 4.17e-42 | 156 |
MS.gene25003.t1 | MTR_5g076850 | 51.282 | 156 | 67 | 4 | 4 | 153 | 5 | 157 | 6.29e-42 | 155 |
MS.gene25003.t1 | MTR_5g014300 | 42.105 | 209 | 104 | 7 | 4 | 199 | 5 | 209 | 1.41e-40 | 146 |
MS.gene25003.t1 | MTR_1g090723 | 50.331 | 151 | 68 | 3 | 8 | 153 | 11 | 159 | 4.27e-40 | 149 |
MS.gene25003.t1 | MTR_1g090723 | 50.331 | 151 | 68 | 3 | 8 | 153 | 11 | 159 | 7.26e-40 | 149 |
MS.gene25003.t1 | MTR_2g080010 | 42.703 | 185 | 79 | 5 | 5 | 165 | 15 | 196 | 2.70e-39 | 143 |
MS.gene25003.t1 | MTR_1g090723 | 49.351 | 154 | 66 | 4 | 8 | 153 | 11 | 160 | 4.79e-39 | 147 |
MS.gene25003.t1 | MTR_7g085220 | 38.158 | 228 | 106 | 9 | 5 | 209 | 8 | 223 | 6.49e-39 | 142 |
MS.gene25003.t1 | MTR_4g098630 | 44.444 | 189 | 93 | 6 | 4 | 184 | 5 | 189 | 2.23e-38 | 139 |
MS.gene25003.t1 | MTR_3g109340 | 48.052 | 154 | 73 | 5 | 4 | 153 | 21 | 171 | 2.55e-37 | 138 |
MS.gene25003.t1 | MTR_3g096140 | 45.695 | 151 | 73 | 5 | 8 | 152 | 10 | 157 | 4.18e-37 | 135 |
MS.gene25003.t1 | MTR_3g096920 | 48.125 | 160 | 68 | 6 | 5 | 155 | 7 | 160 | 2.85e-36 | 133 |
MS.gene25003.t1 | MTR_3g096140 | 45.695 | 151 | 73 | 5 | 8 | 152 | 10 | 157 | 3.02e-36 | 135 |
MS.gene25003.t1 | MTR_7g005280 | 43.636 | 165 | 83 | 4 | 5 | 165 | 15 | 173 | 3.23e-36 | 132 |
MS.gene25003.t1 | MTR_3g109340 | 48.387 | 155 | 72 | 6 | 4 | 153 | 21 | 172 | 3.37e-36 | 135 |
MS.gene25003.t1 | MTR_4g089135 | 47.518 | 141 | 70 | 3 | 5 | 144 | 15 | 152 | 4.28e-36 | 134 |
MS.gene25003.t1 | MTR_0036s0150 | 49.007 | 151 | 70 | 3 | 8 | 153 | 8 | 156 | 5.25e-36 | 137 |
MS.gene25003.t1 | MTR_2157s0010 | 46.061 | 165 | 70 | 6 | 5 | 153 | 8 | 169 | 5.97e-36 | 132 |
MS.gene25003.t1 | MTR_3g070030 | 46.111 | 180 | 80 | 8 | 5 | 172 | 19 | 193 | 6.44e-36 | 134 |
MS.gene25003.t1 | MTR_8g099750 | 44.231 | 156 | 71 | 4 | 5 | 149 | 14 | 164 | 1.20e-35 | 130 |
MS.gene25003.t1 | MTR_6g084430 | 44.848 | 165 | 80 | 6 | 1 | 159 | 1 | 160 | 1.32e-35 | 132 |
MS.gene25003.t1 | MTR_7g100990 | 35.784 | 204 | 115 | 7 | 5 | 196 | 11 | 210 | 1.45e-35 | 132 |
MS.gene25003.t1 | MTR_8g094580 | 44.242 | 165 | 68 | 6 | 5 | 155 | 7 | 161 | 1.85e-35 | 131 |
MS.gene25003.t1 | MTR_3g088110 | 45.860 | 157 | 70 | 5 | 5 | 152 | 7 | 157 | 2.42e-35 | 130 |
MS.gene25003.t1 | MTR_2g093810 | 40.659 | 182 | 91 | 6 | 4 | 181 | 13 | 181 | 4.21e-35 | 131 |
MS.gene25003.t1 | MTR_2g079990 | 36.364 | 242 | 127 | 8 | 4 | 231 | 15 | 243 | 4.51e-35 | 132 |
MS.gene25003.t1 | MTR_1g090720 | 47.205 | 161 | 70 | 4 | 4 | 152 | 41 | 198 | 1.00e-34 | 133 |
MS.gene25003.t1 | MTR_5g012080 | 45.098 | 153 | 76 | 5 | 6 | 152 | 8 | 158 | 1.53e-34 | 130 |
MS.gene25003.t1 | MTR_4g036030 | 46.405 | 153 | 72 | 6 | 6 | 152 | 8 | 156 | 2.20e-34 | 129 |
MS.gene25003.t1 | MTR_4g081870 | 44.848 | 165 | 68 | 6 | 2 | 152 | 6 | 161 | 2.52e-34 | 127 |
MS.gene25003.t1 | MTR_1g008740 | 43.871 | 155 | 80 | 3 | 4 | 153 | 26 | 178 | 2.56e-34 | 130 |
MS.gene25003.t1 | MTR_1g008740 | 43.871 | 155 | 80 | 3 | 4 | 153 | 12 | 164 | 2.62e-34 | 129 |
MS.gene25003.t1 | MTR_8g063550 | 41.722 | 151 | 79 | 4 | 8 | 152 | 9 | 156 | 3.02e-34 | 129 |
MS.gene25003.t1 | MTR_2g078700 | 51.938 | 129 | 58 | 3 | 5 | 132 | 23 | 148 | 3.16e-34 | 130 |
MS.gene25003.t1 | MTR_8g063550 | 41.722 | 151 | 79 | 4 | 8 | 152 | 9 | 156 | 7.19e-34 | 130 |
MS.gene25003.t1 | MTR_3g096920 | 51.111 | 135 | 59 | 4 | 5 | 138 | 7 | 135 | 1.09e-33 | 127 |
MS.gene25003.t1 | MTR_1g069805 | 43.791 | 153 | 81 | 4 | 4 | 154 | 9 | 158 | 1.62e-33 | 125 |
MS.gene25003.t1 | MTR_4g035590 | 46.358 | 151 | 74 | 5 | 6 | 152 | 9 | 156 | 2.18e-33 | 127 |
MS.gene25003.t1 | MTR_8g063550 | 41.722 | 151 | 79 | 4 | 8 | 152 | 9 | 156 | 4.24e-33 | 128 |
MS.gene25003.t1 | MTR_8g467490 | 39.759 | 166 | 82 | 4 | 8 | 158 | 17 | 179 | 5.38e-33 | 127 |
MS.gene25003.t1 | MTR_8g059170 | 44.048 | 168 | 73 | 6 | 4 | 159 | 13 | 171 | 5.61e-33 | 125 |
MS.gene25003.t1 | MTR_3g435150 | 45.860 | 157 | 72 | 6 | 5 | 153 | 16 | 167 | 6.84e-33 | 124 |
MS.gene25003.t1 | MTR_3g116070 | 47.794 | 136 | 66 | 3 | 5 | 137 | 23 | 156 | 7.93e-33 | 125 |
MS.gene25003.t1 | MTR_8g076110 | 41.401 | 157 | 84 | 5 | 1 | 152 | 2 | 155 | 8.01e-33 | 124 |
MS.gene25003.t1 | MTR_7g097090 | 43.919 | 148 | 78 | 4 | 4 | 149 | 9 | 153 | 1.03e-32 | 124 |
MS.gene25003.t1 | MTR_5g021710 | 43.038 | 158 | 80 | 6 | 1 | 152 | 4 | 157 | 1.33e-32 | 125 |
MS.gene25003.t1 | MTR_4g101680 | 44.079 | 152 | 77 | 5 | 6 | 152 | 8 | 156 | 1.33e-32 | 125 |
MS.gene25003.t1 | MTR_2g062730 | 38.119 | 202 | 107 | 8 | 4 | 190 | 9 | 207 | 2.01e-32 | 124 |
MS.gene25003.t1 | MTR_2g064470 | 40.341 | 176 | 90 | 6 | 5 | 172 | 11 | 179 | 3.80e-32 | 122 |
MS.gene25003.t1 | MTR_4g052620 | 42.857 | 161 | 78 | 5 | 1 | 149 | 1 | 159 | 5.13e-32 | 121 |
MS.gene25003.t1 | MTR_7g011130 | 52.713 | 129 | 55 | 5 | 5 | 132 | 19 | 142 | 5.17e-32 | 123 |
MS.gene25003.t1 | MTR_4g108760 | 44.720 | 161 | 68 | 7 | 5 | 153 | 17 | 168 | 6.42e-32 | 123 |
MS.gene25003.t1 | MTR_5g041940 | 42.442 | 172 | 76 | 7 | 5 | 162 | 3 | 165 | 7.20e-32 | 120 |
MS.gene25003.t1 | MTR_2g079990 | 50.000 | 130 | 59 | 4 | 4 | 132 | 15 | 139 | 8.04e-32 | 123 |
MS.gene25003.t1 | MTR_1g097300 | 39.819 | 221 | 100 | 10 | 1 | 198 | 16 | 226 | 9.60e-32 | 125 |
MS.gene25003.t1 | MTR_1g096430 | 41.401 | 157 | 84 | 5 | 1 | 152 | 3 | 156 | 1.45e-31 | 122 |
MS.gene25003.t1 | MTR_8g093580 | 40.397 | 151 | 81 | 4 | 8 | 152 | 9 | 156 | 4.45e-31 | 123 |
MS.gene25003.t1 | MTR_7g011120 | 51.938 | 129 | 56 | 5 | 5 | 132 | 8 | 131 | 6.68e-31 | 119 |
MS.gene25003.t1 | MTR_4g134460 | 43.421 | 152 | 74 | 6 | 8 | 153 | 57 | 202 | 9.25e-31 | 121 |
MS.gene25003.t1 | MTR_8g024480 | 39.216 | 204 | 101 | 8 | 5 | 192 | 15 | 211 | 1.31e-30 | 121 |
MS.gene25003.t1 | MTR_6g012670 | 45.098 | 153 | 72 | 5 | 5 | 156 | 20 | 161 | 1.68e-30 | 119 |
MS.gene25003.t1 | MTR_5g040420 | 34.197 | 193 | 110 | 4 | 8 | 186 | 17 | 206 | 1.89e-30 | 120 |
MS.gene25003.t1 | MTR_6g011860 | 40.994 | 161 | 76 | 5 | 8 | 153 | 18 | 174 | 2.17e-30 | 120 |
MS.gene25003.t1 | MTR_7g085260 | 47.015 | 134 | 65 | 4 | 2 | 132 | 14 | 144 | 2.48e-30 | 119 |
MS.gene25003.t1 | MTR_4g075980 | 40.476 | 168 | 87 | 6 | 8 | 165 | 18 | 182 | 4.76e-30 | 117 |
MS.gene25003.t1 | MTR_6g032770 | 44.961 | 129 | 67 | 3 | 5 | 132 | 18 | 143 | 1.42e-29 | 117 |
MS.gene25003.t1 | MTR_3g096140 | 42.754 | 138 | 70 | 5 | 21 | 152 | 2 | 136 | 4.94e-29 | 115 |
MS.gene25003.t1 | MTR_2g086690 | 41.667 | 156 | 78 | 5 | 6 | 149 | 5 | 159 | 1.06e-28 | 112 |
MS.gene25003.t1 | MTR_3g098810 | 38.095 | 168 | 85 | 5 | 5 | 158 | 14 | 176 | 1.11e-28 | 112 |
MS.gene25003.t1 | MTR_2g068880 | 30.657 | 274 | 155 | 9 | 8 | 253 | 25 | 291 | 2.55e-28 | 112 |
MS.gene25003.t1 | MTR_2g068920 | 31.698 | 265 | 146 | 8 | 8 | 248 | 24 | 277 | 2.56e-28 | 112 |
MS.gene25003.t1 | MTR_3g098810 | 41.727 | 139 | 73 | 4 | 2 | 137 | 11 | 144 | 2.92e-28 | 108 |
MS.gene25003.t1 | MTR_3g070040 | 43.094 | 181 | 82 | 9 | 5 | 172 | 8 | 180 | 4.33e-27 | 109 |
MS.gene25003.t1 | MTR_5g090970 | 44.882 | 127 | 65 | 4 | 8 | 132 | 21 | 144 | 4.99e-25 | 103 |
MS.gene25003.t1 | MTR_5g090970 | 32.444 | 225 | 119 | 8 | 8 | 206 | 21 | 238 | 1.34e-24 | 102 |
MS.gene25003.t1 | MTR_7g105170 | 35.329 | 167 | 91 | 6 | 3 | 154 | 2 | 166 | 1.15e-22 | 95.9 |
MS.gene25003.t1 | MTR_8g094580 | 43.925 | 107 | 39 | 4 | 63 | 155 | 8 | 107 | 7.50e-20 | 87.8 |
MS.gene25003.t1 | MTR_8g093790 | 34.615 | 156 | 81 | 6 | 5 | 159 | 10 | 145 | 1.47e-18 | 82.8 |
MS.gene25003.t1 | MTR_4g094302 | 27.684 | 177 | 99 | 6 | 5 | 166 | 11 | 173 | 4.00e-16 | 76.3 |
MS.gene25003.t1 | MTR_4g094302 | 32.576 | 132 | 71 | 5 | 5 | 132 | 11 | 128 | 1.42e-15 | 73.9 |
MS.gene25003.t1 | MTR_3g096400 | 33.537 | 164 | 84 | 6 | 2 | 149 | 4 | 158 | 4.38e-15 | 73.6 |
MS.gene25003.t1 | MTR_7g083330 | 29.762 | 168 | 107 | 6 | 5 | 167 | 18 | 179 | 7.59e-15 | 72.8 |
MS.gene25003.t1 | MTR_7g070140 | 40.476 | 84 | 48 | 2 | 51 | 132 | 6 | 89 | 2.10e-14 | 70.1 |
MS.gene25003.t1 | MTR_7g083360 | 31.008 | 129 | 83 | 4 | 5 | 132 | 10 | 133 | 9.58e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25003.t1 | AT4G35580 | 56.250 | 160 | 61 | 4 | 4 | 157 | 8 | 164 | 3.67e-53 | 184 |
MS.gene25003.t1 | AT4G35580 | 56.250 | 160 | 61 | 4 | 4 | 157 | 8 | 164 | 3.78e-53 | 184 |
MS.gene25003.t1 | AT4G35580 | 56.250 | 160 | 61 | 4 | 4 | 157 | 8 | 164 | 4.39e-53 | 183 |
MS.gene25003.t1 | AT3G49530 | 51.829 | 164 | 71 | 4 | 3 | 160 | 11 | 172 | 1.15e-49 | 172 |
MS.gene25003.t1 | AT3G49530 | 51.829 | 164 | 71 | 4 | 3 | 160 | 11 | 172 | 4.93e-49 | 171 |
MS.gene25003.t1 | AT4G01550 | 44.240 | 217 | 111 | 6 | 7 | 221 | 6 | 214 | 6.72e-49 | 171 |
MS.gene25003.t1 | AT1G33060 | 54.194 | 155 | 62 | 4 | 4 | 152 | 23 | 174 | 8.80e-49 | 174 |
MS.gene25003.t1 | AT1G33060 | 54.194 | 155 | 62 | 4 | 4 | 152 | 23 | 174 | 9.78e-49 | 174 |
MS.gene25003.t1 | AT5G24590 | 51.592 | 157 | 68 | 4 | 4 | 154 | 12 | 166 | 4.04e-47 | 166 |
MS.gene25003.t1 | AT5G17260 | 51.515 | 165 | 64 | 5 | 4 | 158 | 5 | 163 | 6.46e-45 | 160 |
MS.gene25003.t1 | AT3G17730 | 47.953 | 171 | 74 | 5 | 4 | 165 | 5 | 169 | 3.76e-44 | 153 |
MS.gene25003.t1 | AT3G03200 | 50.909 | 165 | 65 | 5 | 4 | 158 | 5 | 163 | 8.96e-44 | 157 |
MS.gene25003.t1 | AT4G01520 | 39.352 | 216 | 112 | 7 | 6 | 202 | 5 | 220 | 1.83e-43 | 152 |
MS.gene25003.t1 | AT4G17980 | 46.584 | 161 | 77 | 3 | 2 | 154 | 3 | 162 | 1.65e-42 | 149 |
MS.gene25003.t1 | AT4G01540 | 39.535 | 215 | 111 | 7 | 7 | 202 | 6 | 220 | 3.22e-42 | 152 |
MS.gene25003.t1 | AT4G17980 | 46.584 | 161 | 77 | 3 | 2 | 154 | 3 | 162 | 6.26e-42 | 148 |
MS.gene25003.t1 | AT4G01540 | 39.535 | 215 | 111 | 7 | 7 | 202 | 6 | 220 | 6.52e-42 | 152 |
MS.gene25003.t1 | AT4G01540 | 39.535 | 215 | 111 | 7 | 7 | 202 | 6 | 220 | 9.02e-42 | 151 |
MS.gene25003.t1 | AT4G01540 | 39.535 | 215 | 111 | 7 | 7 | 202 | 6 | 220 | 1.36e-41 | 152 |
MS.gene25003.t1 | AT1G65910 | 50.909 | 165 | 70 | 5 | 4 | 160 | 5 | 166 | 1.81e-41 | 154 |
MS.gene25003.t1 | AT3G10480 | 48.077 | 156 | 71 | 4 | 4 | 152 | 26 | 178 | 1.15e-40 | 149 |
MS.gene25003.t1 | AT3G10490 | 46.541 | 159 | 75 | 4 | 1 | 152 | 23 | 178 | 1.53e-40 | 143 |
MS.gene25003.t1 | AT3G10480 | 47.742 | 155 | 72 | 4 | 4 | 152 | 26 | 177 | 5.09e-40 | 147 |
MS.gene25003.t1 | AT3G10490 | 46.541 | 159 | 75 | 4 | 1 | 152 | 23 | 178 | 1.46e-39 | 146 |
MS.gene25003.t1 | AT5G46590 | 45.509 | 167 | 82 | 4 | 5 | 164 | 6 | 170 | 7.47e-39 | 140 |
MS.gene25003.t1 | AT1G02230 | 46.405 | 153 | 77 | 4 | 6 | 155 | 4 | 154 | 1.40e-38 | 141 |
MS.gene25003.t1 | AT1G54330 | 50.000 | 152 | 70 | 4 | 4 | 152 | 5 | 153 | 7.27e-38 | 138 |
MS.gene25003.t1 | AT5G09330 | 49.669 | 151 | 67 | 4 | 8 | 152 | 9 | 156 | 3.37e-37 | 140 |
MS.gene25003.t1 | AT5G09330 | 49.669 | 151 | 67 | 4 | 8 | 152 | 9 | 156 | 3.37e-37 | 140 |
MS.gene25003.t1 | AT5G09330 | 49.669 | 151 | 67 | 4 | 8 | 152 | 9 | 156 | 3.37e-37 | 140 |
MS.gene25003.t1 | AT5G09330 | 49.669 | 151 | 67 | 4 | 8 | 152 | 9 | 156 | 3.37e-37 | 140 |
MS.gene25003.t1 | AT5G09330 | 49.669 | 151 | 67 | 4 | 8 | 152 | 9 | 156 | 3.37e-37 | 140 |
MS.gene25003.t1 | AT3G04070 | 45.181 | 166 | 72 | 5 | 4 | 153 | 9 | 171 | 4.22e-37 | 137 |
MS.gene25003.t1 | AT1G01720 | 45.570 | 158 | 70 | 5 | 5 | 152 | 7 | 158 | 8.66e-37 | 135 |
MS.gene25003.t1 | AT3G15500 | 46.707 | 167 | 67 | 7 | 4 | 157 | 13 | 170 | 9.14e-37 | 135 |
MS.gene25003.t1 | AT5G08790 | 45.912 | 159 | 69 | 6 | 5 | 152 | 7 | 159 | 1.20e-36 | 134 |
MS.gene25003.t1 | AT1G12260 | 45.912 | 159 | 73 | 7 | 3 | 152 | 2 | 156 | 1.68e-36 | 135 |
MS.gene25003.t1 | AT5G04410 | 48.101 | 158 | 73 | 4 | 2 | 153 | 6 | 160 | 1.92e-36 | 139 |
MS.gene25003.t1 | AT3G10500 | 49.367 | 158 | 71 | 5 | 2 | 153 | 6 | 160 | 1.95e-36 | 139 |
MS.gene25003.t1 | AT2G27300 | 41.398 | 186 | 98 | 7 | 5 | 186 | 15 | 193 | 3.09e-36 | 134 |
MS.gene25003.t1 | AT1G52890 | 44.253 | 174 | 78 | 6 | 4 | 167 | 13 | 177 | 4.22e-36 | 134 |
MS.gene25003.t1 | AT1G12260 | 45.912 | 159 | 73 | 7 | 3 | 152 | 2 | 156 | 4.25e-36 | 135 |
MS.gene25003.t1 | AT5G66300 | 46.452 | 155 | 74 | 5 | 4 | 152 | 11 | 162 | 5.71e-36 | 132 |
MS.gene25003.t1 | AT5G64060 | 47.500 | 160 | 68 | 6 | 2 | 152 | 4 | 156 | 6.12e-36 | 134 |
MS.gene25003.t1 | AT5G46590 | 49.275 | 138 | 67 | 3 | 5 | 141 | 6 | 141 | 8.51e-36 | 132 |
MS.gene25003.t1 | AT3G18400 | 45.122 | 164 | 78 | 6 | 1 | 157 | 1 | 159 | 8.70e-36 | 132 |
MS.gene25003.t1 | AT2G24430 | 45.513 | 156 | 77 | 4 | 4 | 154 | 15 | 167 | 1.02e-35 | 132 |
MS.gene25003.t1 | AT2G24430 | 45.513 | 156 | 77 | 4 | 4 | 154 | 15 | 167 | 1.02e-35 | 132 |
MS.gene25003.t1 | AT3G04070 | 51.128 | 133 | 58 | 4 | 4 | 132 | 9 | 138 | 1.16e-35 | 133 |
MS.gene25003.t1 | AT3G44290 | 45.806 | 155 | 76 | 6 | 1 | 154 | 11 | 158 | 1.68e-35 | 129 |
MS.gene25003.t1 | AT3G15510 | 42.135 | 178 | 81 | 5 | 9 | 167 | 21 | 195 | 1.77e-35 | 133 |
MS.gene25003.t1 | AT5G39610 | 46.795 | 156 | 70 | 6 | 5 | 152 | 20 | 170 | 1.80e-35 | 131 |
MS.gene25003.t1 | AT4G27410 | 45.283 | 159 | 68 | 6 | 4 | 152 | 13 | 162 | 5.07e-35 | 130 |
MS.gene25003.t1 | AT1G62700 | 41.237 | 194 | 100 | 7 | 3 | 188 | 2 | 189 | 6.18e-35 | 132 |
MS.gene25003.t1 | AT1G62700 | 41.237 | 194 | 100 | 7 | 3 | 188 | 2 | 189 | 6.18e-35 | 132 |
MS.gene25003.t1 | AT1G32510 | 44.910 | 167 | 78 | 5 | 1 | 154 | 1 | 166 | 1.65e-34 | 128 |
MS.gene25003.t1 | AT1G71930 | 43.949 | 157 | 80 | 5 | 1 | 152 | 5 | 158 | 1.94e-34 | 129 |
MS.gene25003.t1 | AT1G71930 | 43.949 | 157 | 80 | 5 | 1 | 152 | 5 | 158 | 1.94e-34 | 129 |
MS.gene25003.t1 | AT3G29035 | 51.493 | 134 | 49 | 6 | 5 | 132 | 24 | 147 | 2.10e-34 | 129 |
MS.gene25003.t1 | AT1G76420 | 42.581 | 155 | 81 | 4 | 4 | 153 | 21 | 172 | 2.26e-34 | 129 |
MS.gene25003.t1 | AT3G44290 | 45.806 | 155 | 76 | 6 | 1 | 154 | 11 | 158 | 3.21e-34 | 129 |
MS.gene25003.t1 | AT1G69490 | 45.000 | 160 | 73 | 7 | 3 | 152 | 7 | 161 | 3.22e-34 | 127 |
MS.gene25003.t1 | AT5G63790 | 40.625 | 192 | 90 | 7 | 4 | 177 | 49 | 234 | 3.55e-34 | 128 |
MS.gene25003.t1 | AT5G63790 | 40.625 | 192 | 90 | 7 | 4 | 177 | 59 | 244 | 3.57e-34 | 129 |
MS.gene25003.t1 | AT5G53950 | 52.713 | 129 | 57 | 3 | 5 | 132 | 17 | 142 | 3.80e-34 | 130 |
MS.gene25003.t1 | AT1G77450 | 44.586 | 157 | 72 | 5 | 5 | 152 | 10 | 160 | 4.80e-34 | 126 |
MS.gene25003.t1 | AT3G10480 | 39.791 | 191 | 72 | 6 | 2 | 152 | 24 | 211 | 7.90e-34 | 131 |
MS.gene25003.t1 | AT1G02250 | 44.156 | 154 | 81 | 4 | 6 | 156 | 4 | 155 | 8.38e-34 | 128 |
MS.gene25003.t1 | AT1G61110 | 42.564 | 195 | 98 | 7 | 5 | 196 | 16 | 199 | 1.28e-33 | 127 |
MS.gene25003.t1 | AT5G61430 | 45.223 | 157 | 73 | 7 | 5 | 153 | 16 | 167 | 2.11e-33 | 127 |
MS.gene25003.t1 | AT2G17040 | 43.210 | 162 | 81 | 5 | 8 | 161 | 9 | 167 | 2.35e-33 | 125 |
MS.gene25003.t1 | AT3G04060 | 45.513 | 156 | 73 | 6 | 5 | 152 | 20 | 171 | 2.41e-33 | 127 |
MS.gene25003.t1 | AT5G22290 | 45.098 | 153 | 73 | 7 | 5 | 154 | 22 | 166 | 2.50e-33 | 127 |
MS.gene25003.t1 | AT5G04395 | 43.709 | 151 | 71 | 4 | 3 | 140 | 26 | 175 | 5.84e-33 | 122 |
MS.gene25003.t1 | AT5G39820 | 45.255 | 137 | 71 | 3 | 8 | 143 | 23 | 156 | 7.86e-33 | 125 |
MS.gene25003.t1 | AT5G07680 | 51.163 | 129 | 57 | 5 | 5 | 132 | 3 | 126 | 1.22e-32 | 124 |
MS.gene25003.t1 | AT5G07680 | 51.163 | 129 | 57 | 5 | 5 | 132 | 17 | 140 | 1.38e-32 | 124 |
MS.gene25003.t1 | AT3G15170 | 50.000 | 128 | 60 | 3 | 6 | 132 | 21 | 145 | 1.80e-32 | 124 |
MS.gene25003.t1 | AT1G34190 | 45.806 | 155 | 69 | 5 | 8 | 153 | 19 | 167 | 2.01e-32 | 127 |
MS.gene25003.t1 | AT1G33280 | 45.033 | 151 | 76 | 5 | 6 | 152 | 9 | 156 | 2.10e-32 | 123 |
MS.gene25003.t1 | AT2G18060 | 43.871 | 155 | 77 | 6 | 4 | 152 | 8 | 158 | 2.36e-32 | 124 |
MS.gene25003.t1 | AT2G18060 | 43.871 | 155 | 77 | 6 | 4 | 152 | 8 | 158 | 2.36e-32 | 124 |
MS.gene25003.t1 | AT4G10350 | 44.805 | 154 | 75 | 5 | 6 | 152 | 10 | 160 | 2.76e-32 | 124 |
MS.gene25003.t1 | AT5G62380 | 44.156 | 154 | 76 | 6 | 5 | 152 | 7 | 156 | 2.81e-32 | 124 |
MS.gene25003.t1 | AT5G62380 | 44.156 | 154 | 76 | 6 | 5 | 152 | 7 | 156 | 2.81e-32 | 124 |
MS.gene25003.t1 | AT4G27410 | 41.954 | 174 | 69 | 7 | 4 | 152 | 13 | 179 | 2.98e-32 | 123 |
MS.gene25003.t1 | AT4G36160 | 43.226 | 155 | 78 | 6 | 4 | 152 | 13 | 163 | 7.34e-32 | 124 |
MS.gene25003.t1 | AT4G36160 | 43.226 | 155 | 78 | 6 | 4 | 152 | 9 | 159 | 7.45e-32 | 124 |
MS.gene25003.t1 | AT4G36160 | 43.226 | 155 | 78 | 6 | 4 | 152 | 9 | 159 | 7.45e-32 | 124 |
MS.gene25003.t1 | AT1G34180 | 45.161 | 155 | 70 | 5 | 8 | 153 | 19 | 167 | 1.03e-31 | 124 |
MS.gene25003.t1 | AT2G33480 | 46.104 | 154 | 67 | 6 | 5 | 152 | 15 | 158 | 1.19e-31 | 120 |
MS.gene25003.t1 | AT2G33480 | 44.805 | 154 | 71 | 5 | 5 | 152 | 15 | 160 | 1.49e-31 | 120 |
MS.gene25003.t1 | AT2G02450 | 43.624 | 149 | 76 | 5 | 8 | 152 | 54 | 198 | 2.17e-31 | 122 |
MS.gene25003.t1 | AT1G01010 | 44.231 | 156 | 77 | 4 | 7 | 154 | 5 | 158 | 2.26e-31 | 123 |
MS.gene25003.t1 | AT1G34180 | 50.794 | 126 | 58 | 3 | 8 | 132 | 19 | 141 | 2.33e-31 | 125 |
MS.gene25003.t1 | AT1G26870 | 36.816 | 201 | 95 | 6 | 8 | 179 | 19 | 216 | 2.42e-31 | 123 |
MS.gene25003.t1 | AT5G13180 | 41.830 | 153 | 78 | 4 | 5 | 152 | 14 | 160 | 3.02e-31 | 119 |
MS.gene25003.t1 | AT2G02450 | 43.624 | 149 | 76 | 5 | 8 | 152 | 54 | 198 | 3.36e-31 | 122 |
MS.gene25003.t1 | AT1G79580 | 43.590 | 156 | 76 | 6 | 4 | 152 | 16 | 166 | 2.00e-30 | 119 |
MS.gene25003.t1 | AT1G79580 | 43.590 | 156 | 76 | 6 | 4 | 152 | 16 | 166 | 2.00e-30 | 119 |
MS.gene25003.t1 | AT1G79580 | 43.590 | 156 | 76 | 6 | 4 | 152 | 16 | 166 | 2.00e-30 | 119 |
MS.gene25003.t1 | AT1G79580 | 43.590 | 156 | 76 | 6 | 4 | 152 | 16 | 166 | 2.00e-30 | 119 |
MS.gene25003.t1 | AT1G79580 | 43.590 | 156 | 76 | 6 | 4 | 152 | 16 | 166 | 2.00e-30 | 119 |
MS.gene25003.t1 | AT1G56010 | 38.596 | 171 | 85 | 5 | 5 | 166 | 19 | 178 | 2.33e-30 | 118 |
MS.gene25003.t1 | AT5G18270 | 48.837 | 129 | 61 | 4 | 5 | 132 | 21 | 145 | 2.56e-30 | 118 |
MS.gene25003.t1 | AT5G18270 | 48.062 | 129 | 62 | 4 | 5 | 132 | 21 | 145 | 5.84e-30 | 117 |
MS.gene25003.t1 | AT2G43000 | 42.484 | 153 | 76 | 6 | 8 | 153 | 21 | 168 | 2.69e-29 | 114 |
MS.gene25003.t1 | AT3G12910 | 39.157 | 166 | 78 | 5 | 8 | 153 | 24 | 186 | 4.87e-29 | 114 |
MS.gene25003.t1 | AT3G04420 | 41.722 | 151 | 84 | 4 | 6 | 154 | 4 | 152 | 5.11e-29 | 114 |
MS.gene25003.t1 | AT3G04420 | 41.722 | 151 | 84 | 4 | 6 | 154 | 4 | 152 | 5.63e-29 | 115 |
MS.gene25003.t1 | AT1G52880 | 45.294 | 170 | 64 | 7 | 9 | 157 | 21 | 182 | 7.84e-29 | 114 |
MS.gene25003.t1 | AT3G61910 | 35.577 | 208 | 104 | 8 | 5 | 192 | 11 | 208 | 9.10e-29 | 114 |
MS.gene25003.t1 | AT2G46770 | 39.181 | 171 | 75 | 6 | 5 | 152 | 16 | 180 | 2.13e-28 | 114 |
MS.gene25003.t1 | AT1G34180 | 46.377 | 138 | 58 | 4 | 8 | 132 | 19 | 153 | 2.39e-28 | 115 |
MS.gene25003.t1 | AT3G12977 | 37.297 | 185 | 96 | 7 | 4 | 177 | 17 | 192 | 3.13e-28 | 111 |
MS.gene25003.t1 | AT1G34180 | 46.377 | 138 | 58 | 4 | 8 | 132 | 19 | 153 | 3.54e-28 | 115 |
MS.gene25003.t1 | AT1G02220 | 43.151 | 146 | 78 | 4 | 6 | 150 | 4 | 145 | 5.18e-28 | 113 |
MS.gene25003.t1 | AT4G28530 | 39.181 | 171 | 75 | 5 | 5 | 153 | 10 | 173 | 6.91e-28 | 112 |
MS.gene25003.t1 | AT1G32770 | 34.722 | 216 | 106 | 9 | 5 | 193 | 16 | 223 | 1.21e-27 | 112 |
MS.gene25003.t1 | AT5G22380 | 38.750 | 160 | 86 | 5 | 1 | 149 | 1 | 159 | 3.26e-27 | 107 |
MS.gene25003.t1 | AT1G32870 | 44.805 | 154 | 72 | 6 | 8 | 153 | 13 | 161 | 2.52e-25 | 107 |
MS.gene25003.t1 | AT1G32870 | 44.805 | 154 | 72 | 6 | 8 | 153 | 13 | 161 | 2.62e-25 | 107 |
MS.gene25003.t1 | AT1G32870 | 44.805 | 154 | 72 | 6 | 8 | 153 | 49 | 197 | 3.31e-25 | 107 |
MS.gene25003.t1 | AT3G44350 | 37.423 | 163 | 90 | 5 | 1 | 153 | 1 | 161 | 8.55e-25 | 101 |
MS.gene25003.t1 | AT3G44350 | 40.288 | 139 | 77 | 4 | 1 | 135 | 1 | 137 | 4.91e-24 | 97.1 |
MS.gene25003.t1 | AT3G04430 | 41.176 | 136 | 64 | 5 | 11 | 134 | 6 | 137 | 4.83e-21 | 90.1 |
MS.gene25003.t1 | AT4G28530 | 43.119 | 109 | 45 | 2 | 5 | 98 | 10 | 116 | 7.58e-19 | 86.7 |
MS.gene25003.t1 | AT3G12977 | 38.710 | 124 | 63 | 4 | 63 | 177 | 20 | 139 | 9.48e-18 | 81.6 |
MS.gene25003.t1 | AT4G10350 | 41.905 | 105 | 53 | 3 | 54 | 152 | 11 | 113 | 2.23e-17 | 82.0 |
MS.gene25003.t1 | AT5G61430 | 42.453 | 106 | 51 | 5 | 56 | 153 | 1 | 104 | 4.42e-17 | 80.9 |
MS.gene25003.t1 | AT1G56010 | 38.938 | 113 | 51 | 4 | 63 | 166 | 8 | 111 | 9.60e-17 | 79.7 |
MS.gene25003.t1 | AT5G64530 | 34.351 | 131 | 66 | 5 | 5 | 132 | 3 | 116 | 7.21e-16 | 74.7 |
MS.gene25003.t1 | AT5G64530 | 34.091 | 132 | 67 | 5 | 4 | 132 | 2 | 116 | 1.59e-15 | 74.7 |
MS.gene25003.t1 | AT2G33480 | 42.857 | 98 | 48 | 3 | 61 | 152 | 8 | 103 | 1.94e-15 | 74.7 |
MS.gene25003.t1 | AT3G56530 | 35.526 | 152 | 88 | 7 | 4 | 149 | 51 | 198 | 2.82e-14 | 73.2 |
MS.gene25003.t1 | AT5G14490 | 28.497 | 193 | 112 | 7 | 5 | 177 | 55 | 241 | 1.65e-12 | 68.2 |
MS.gene25003.t1 | AT5G14490 | 28.723 | 188 | 108 | 7 | 5 | 172 | 58 | 239 | 1.77e-12 | 68.2 |
MS.gene25003.t1 | AT5G14490 | 28.497 | 193 | 112 | 7 | 5 | 177 | 55 | 241 | 2.91e-12 | 67.0 |
MS.gene25003.t1 | AT5G14490 | 28.723 | 188 | 108 | 7 | 5 | 172 | 58 | 239 | 3.53e-12 | 67.4 |
Find 61 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTTCGAGATGATTTC+GGG | 0.227385 | 7.3:+65066644 | MS.gene25003:CDS |
GAATATGGAACCAATGTTTC+AGG | 0.255948 | 7.3:+65066119 | MS.gene25003:intron |
TACTGTAATGGTTGTGTTCC+TGG | 0.263116 | 7.3:+65065717 | MS.gene25003:CDS |
ACAAATACGCAAATAGTAAA+AGG | 0.269504 | 7.3:+65065589 | MS.gene25003:CDS |
GCATCATTTCGAGATGATTT+CGG | 0.275502 | 7.3:+65066643 | MS.gene25003:CDS |
TTTACAGTGTGGCAATGTTC+TGG | 0.292487 | 7.3:+65066573 | MS.gene25003:intron |
AGAGGTACAGACAATGTTAT+TGG | 0.332752 | 7.3:+65065675 | MS.gene25003:CDS |
TGGTCATGACCGTAAGATTA+AGG | 0.341101 | 7.3:+65065650 | MS.gene25003:CDS |
TTTCTTGAACATCCTAGTTC+AGG | 0.346685 | 7.3:+65066610 | MS.gene25003:CDS |
GTTCGAACCTTGGGACTTAC+CGG | 0.351183 | 7.3:+65065433 | MS.gene25003:CDS |
GACATGAAGGTGGCTGGTCT+TGG | 0.374690 | 7.3:-65066781 | None:intergenic |
CATATCGATGTGTCCACTTT+CGG | 0.387067 | 7.3:-65066244 | None:intergenic |
TTCCTGGTGTTAAAAGCAAC+TGG | 0.389751 | 7.3:+65065733 | MS.gene25003:CDS |
TGGCTGGTCTTGGATGATAC+TGG | 0.427061 | 7.3:-65066771 | None:intergenic |
GAAGGACACAGTGTGGATAC+TGG | 0.428296 | 7.3:+65065619 | MS.gene25003:CDS |
TGTTTGCAAGTTCGAACCTT+GGG | 0.438935 | 7.3:+65065424 | MS.gene25003:CDS |
TGATGAGGTTCCTGAAACAT+TGG | 0.440724 | 7.3:-65066129 | None:intergenic |
CAAGCTCTTCATCTGTTGGT+TGG | 0.449162 | 7.3:-65065331 | None:intergenic |
AATGTTTCAGGAACCTCATC+AGG | 0.458637 | 7.3:+65066131 | MS.gene25003:CDS |
TCGGAACTCATGTGTTTACT+TGG | 0.464802 | 7.3:-65065974 | None:intergenic |
TTTACAAGCTCTTCATCTGT+TGG | 0.472698 | 7.3:-65065335 | None:intergenic |
TCCTCGTCAATAGTTTCAAA+CGG | 0.474217 | 7.3:-65066273 | None:intergenic |
GACCGTAAGATTAAGGTTAG+AGG | 0.484303 | 7.3:+65065657 | MS.gene25003:CDS |
GAAAATCAAGAAGCAGTTGA+AGG | 0.489171 | 7.3:+65066001 | MS.gene25003:CDS |
TACCTCTAACCTTAATCTTA+CGG | 0.491526 | 7.3:-65065659 | None:intergenic |
GGTTGGAATCTGAATCCAAC+AGG | 0.493475 | 7.3:-65065314 | None:intergenic |
TTCAATCTCTGAAAATGAGA+TGG | 0.499943 | 7.3:+65066188 | MS.gene25003:CDS |
ATGACAAACTCATTTCCTGT+TGG | 0.502565 | 7.3:+65065299 | MS.gene25003:CDS |
GCATAGTATTCTCCTGAACT+AGG | 0.503449 | 7.3:-65066622 | None:intergenic |
GAAGACTGGTATGTTGAGAA+AGG | 0.511939 | 7.3:-65066168 | None:intergenic |
AGCTATAAAATTGTTGACAA+TGG | 0.512549 | 7.3:-65065393 | None:intergenic |
TTGTTTCTTCGTAGAGTGGA+AGG | 0.518122 | 7.3:-65066745 | None:intergenic |
AAAACACTTGTGTACTGTAA+TGG | 0.519556 | 7.3:+65065705 | MS.gene25003:CDS |
GATAGAATGATATGTGATGA+AGG | 0.532647 | 7.3:+65065947 | MS.gene25003:CDS |
GAAGTATCTTTATCGAACTC+AGG | 0.533769 | 7.3:+65066210 | MS.gene25003:CDS |
TAGAATGATATGTGATGAAG+GGG | 0.540119 | 7.3:+65065949 | MS.gene25003:CDS |
TTCGAACCTTGGGACTTACC+GGG | 0.549304 | 7.3:+65065434 | MS.gene25003:CDS |
ATAGAATGATATGTGATGAA+GGG | 0.555622 | 7.3:+65065948 | MS.gene25003:CDS |
CTCAACGACTCGGACTGGAC+AGG | 0.561123 | 7.3:-65066376 | None:intergenic |
ACAAACCTGGTTATCATCAA+AGG | 0.564326 | 7.3:-65065781 | None:intergenic |
CTCGACTGCAGATAAACCTC+GGG | 0.565331 | 7.3:+65066690 | MS.gene25003:CDS |
TACCACCTTTGATGATAACC+AGG | 0.567592 | 7.3:+65065776 | MS.gene25003:CDS |
ATCAATTCGATGTTAAATGA+CGG | 0.567730 | 7.3:+65066306 | MS.gene25003:CDS |
ATGTTTGCAAGTTCGAACCT+TGG | 0.568862 | 7.3:+65065423 | MS.gene25003:CDS |
ATAGTAAAAGGTTTAACAGA+AGG | 0.579914 | 7.3:+65065601 | MS.gene25003:CDS |
CAATGTTCTGGATACTTCAA+CGG | 0.597908 | 7.3:+65066585 | MS.gene25003:CDS |
ATCTGCAGTCGAGTCACAAG+AGG | 0.603959 | 7.3:-65066680 | None:intergenic |
TGTGGATACTGGAAAGCCAC+TGG | 0.617140 | 7.3:+65065630 | MS.gene25003:CDS |
AATCTTACGGTCATGACCAG+TGG | 0.621150 | 7.3:-65065646 | None:intergenic |
ACTCGACTGCAGATAAACCT+CGG | 0.628338 | 7.3:+65066689 | MS.gene25003:CDS |
TCCGTTTGAAACTATTGACG+AGG | 0.648885 | 7.3:+65066272 | MS.gene25003:CDS |
TAAAATCCGATGATCCCGAA+TGG | 0.649145 | 7.3:+65065544 | MS.gene25003:CDS |
ATCATTTCGAGATGATTTCG+GGG | 0.650121 | 7.3:+65066645 | MS.gene25003:CDS |
AACCTGGTTATCATCAAAGG+TGG | 0.663139 | 7.3:-65065778 | None:intergenic |
GAATGATATGTGATGAAGGG+GGG | 0.665909 | 7.3:+65065951 | MS.gene25003:CDS |
TCCTGGTGTTAAAAGCAACT+GGG | 0.666261 | 7.3:+65065734 | MS.gene25003:CDS |
TCATTTCGAGATGATTTCGG+GGG | 0.671935 | 7.3:+65066646 | MS.gene25003:CDS |
TTTGCGTATTTGTAATCACG+AGG | 0.676971 | 7.3:-65065579 | None:intergenic |
ACACAATTGATCATCTCCCG+AGG | 0.677154 | 7.3:-65066706 | None:intergenic |
TTTAACAGAAGGACACAGTG+TGG | 0.694289 | 7.3:+65065612 | MS.gene25003:CDS |
AGAATGATATGTGATGAAGG+GGG | 0.758539 | 7.3:+65065950 | MS.gene25003:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTATCAAAGAAAATATTTA+CGG | - | chr7.3:65066451-65066470 | None:intergenic | 15.0% |
!!! | TTTTATGAGAAAATAATGAT+GGG | - | chr7.3:65065477-65065496 | None:intergenic | 15.0% |
!!! | TTTTTATGAGAAAATAATGA+TGG | - | chr7.3:65065478-65065497 | None:intergenic | 15.0% |
!! | GTATCAAAGAAAATATTTAC+GGG | - | chr7.3:65066450-65066469 | None:intergenic | 20.0% |
!! | TATCTCAAAAACAAGTTATT+TGG | + | chr7.3:65065362-65065381 | MS.gene25003:CDS | 20.0% |
!! | TTTATGAGAAAATAATGATG+GGG | - | chr7.3:65065476-65065495 | None:intergenic | 20.0% |
!!! | ATGTTTTAACTTTATGAGTA+TGG | + | chr7.3:65065816-65065835 | MS.gene25003:intron | 20.0% |
! | ACAAATACGCAAATAGTAAA+AGG | + | chr7.3:65065589-65065608 | MS.gene25003:CDS | 25.0% |
! | AGCTATAAAATTGTTGACAA+TGG | - | chr7.3:65065396-65065415 | None:intergenic | 25.0% |
! | ATAGAATGATATGTGATGAA+GGG | + | chr7.3:65065948-65065967 | MS.gene25003:CDS | 25.0% |
! | ATAGTAAAAGGTTTAACAGA+AGG | + | chr7.3:65065601-65065620 | MS.gene25003:CDS | 25.0% |
! | ATCAATTCGATGTTAAATGA+CGG | + | chr7.3:65066306-65066325 | MS.gene25003:CDS | 25.0% |
!! | AAATAATGATGGGGTTTATT+TGG | - | chr7.3:65065467-65065486 | None:intergenic | 25.0% |
!!! | AGGATAATCAACATTTTTTC+CGG | - | chr7.3:65065853-65065872 | None:intergenic | 25.0% |
!!! | ATAACTTGTTTTTGAGATAG+TGG | - | chr7.3:65065361-65065380 | None:intergenic | 25.0% |
!!! | TCTTCTAAAATTTTACAGTG+TGG | + | chr7.3:65066562-65066581 | MS.gene25003:intron | 25.0% |
AAAACACTTGTGTACTGTAA+TGG | + | chr7.3:65065705-65065724 | MS.gene25003:CDS | 30.0% | |
AAGCATGTTTCATGTAAGAA+AGG | - | chr7.3:65066098-65066117 | None:intergenic | 30.0% | |
AGGACTAAAGAAAAACCATT+CGG | - | chr7.3:65065562-65065581 | None:intergenic | 30.0% | |
CATGAAACATGCTTAGAATA+TGG | + | chr7.3:65066104-65066123 | MS.gene25003:intron | 30.0% | |
CATTCTAGTAGCATTTCAAA+AGG | - | chr7.3:65066522-65066541 | None:intergenic | 30.0% | |
GATAGAATGATATGTGATGA+AGG | + | chr7.3:65065947-65065966 | MS.gene25003:CDS | 30.0% | |
TACCTCTAACCTTAATCTTA+CGG | - | chr7.3:65065662-65065681 | None:intergenic | 30.0% | |
TAGAATGATATGTGATGAAG+GGG | + | chr7.3:65065949-65065968 | MS.gene25003:CDS | 30.0% | |
TTGAAGGAATTCTTGATGTA+AGG | + | chr7.3:65066017-65066036 | MS.gene25003:intron | 30.0% | |
TTGTTGTAACAAAACAAACC+TGG | - | chr7.3:65065797-65065816 | None:intergenic | 30.0% | |
! | AAAAGAAGACACACTTTTGT+CGG | + | chr7.3:65066348-65066367 | MS.gene25003:CDS | 30.0% |
! | AAAAGTCCTCTACGAAATTT+TGG | - | chr7.3:65065876-65065895 | None:intergenic | 30.0% |
! | TTCAATCTCTGAAAATGAGA+TGG | + | chr7.3:65066188-65066207 | MS.gene25003:CDS | 30.0% |
!! | GTTTTATTCATACTGTGATG+TGG | + | chr7.3:65066483-65066502 | MS.gene25003:intron | 30.0% |
!!! | CTTTTGAAATGCTACTAGAA+TGG | + | chr7.3:65066520-65066539 | MS.gene25003:intron | 30.0% |
!!! | GGTTTATTTGGTTTTTTACC+CGG | - | chr7.3:65065455-65065474 | None:intergenic | 30.0% |
!!! | TGAGAAAGGAAAGTACTTTT+CGG | - | chr7.3:65066157-65066176 | None:intergenic | 30.0% |
ACAAACCTGGTTATCATCAA+AGG | - | chr7.3:65065784-65065803 | None:intergenic | 35.0% | |
AGAATGATATGTGATGAAGG+GGG | + | chr7.3:65065950-65065969 | MS.gene25003:CDS | 35.0% | |
ATCATTTCGAGATGATTTCG+GGG | + | chr7.3:65066645-65066664 | MS.gene25003:CDS | 35.0% | |
ATGACAAACTCATTTCCTGT+TGG | + | chr7.3:65065299-65065318 | MS.gene25003:CDS | 35.0% | |
CATCATTTCGAGATGATTTC+GGG | + | chr7.3:65066644-65066663 | MS.gene25003:CDS | 35.0% | |
GAAAATCAAGAAGCAGTTGA+AGG | + | chr7.3:65066001-65066020 | MS.gene25003:CDS | 35.0% | |
GAATATGGAACCAATGTTTC+AGG | + | chr7.3:65066119-65066138 | MS.gene25003:intron | 35.0% | |
GCATCATTTCGAGATGATTT+CGG | + | chr7.3:65066643-65066662 | MS.gene25003:CDS | 35.0% | |
GGACTAAAGAAAAACCATTC+GGG | - | chr7.3:65065561-65065580 | None:intergenic | 35.0% | |
TATCCTCCAAAATTTCGTAG+AGG | + | chr7.3:65065867-65065886 | MS.gene25003:intron | 35.0% | |
TCCTCGTCAATAGTTTCAAA+CGG | - | chr7.3:65066276-65066295 | None:intergenic | 35.0% | |
TCGTTGAGAATGATCTACTA+TGG | + | chr7.3:65066391-65066410 | MS.gene25003:intron | 35.0% | |
TTTACAAGCTCTTCATCTGT+TGG | - | chr7.3:65065338-65065357 | None:intergenic | 35.0% | |
TTTCTTGAACATCCTAGTTC+AGG | + | chr7.3:65066610-65066629 | MS.gene25003:CDS | 35.0% | |
TTTGCGTATTTGTAATCACG+AGG | - | chr7.3:65065582-65065601 | None:intergenic | 35.0% | |
! | AGAGGTACAGACAATGTTAT+TGG | + | chr7.3:65065675-65065694 | MS.gene25003:CDS | 35.0% |
! | CAATGTTCTGGATACTTCAA+CGG | + | chr7.3:65066585-65066604 | MS.gene25003:CDS | 35.0% |
! | CATTTTCAGAGATTGAAGAC+TGG | - | chr7.3:65066185-65066204 | None:intergenic | 35.0% |
! | GAAGTATCTTTATCGAACTC+AGG | + | chr7.3:65066210-65066229 | MS.gene25003:CDS | 35.0% |
! | GAGTATGGTATGAGTTTTTC+CGG | + | chr7.3:65065831-65065850 | MS.gene25003:intron | 35.0% |
! | GGATTTTATGATTCCGAAAG+TGG | + | chr7.3:65066231-65066250 | MS.gene25003:CDS | 35.0% |
!! | GTTTTTGTTTCTTCGTAGAG+TGG | - | chr7.3:65066752-65066771 | None:intergenic | 35.0% |
!!! | TTCCTCTTCAGCTTTTTTCT+CGG | - | chr7.3:65065924-65065943 | None:intergenic | 35.0% |
AACCTGGTTATCATCAAAGG+TGG | - | chr7.3:65065781-65065800 | None:intergenic | 40.0% | |
AATGTTTCAGGAACCTCATC+AGG | + | chr7.3:65066131-65066150 | MS.gene25003:CDS | 40.0% | |
ATGTTTGCAAGTTCGAACCT+TGG | + | chr7.3:65065423-65065442 | MS.gene25003:CDS | 40.0% | |
CATATCGATGTGTCCACTTT+CGG | - | chr7.3:65066247-65066266 | None:intergenic | 40.0% | |
GAAAAACCATTCGGGATCAT+CGG | - | chr7.3:65065553-65065572 | None:intergenic | 40.0% | |
GAAGACTGGTATGTTGAGAA+AGG | - | chr7.3:65066171-65066190 | None:intergenic | 40.0% | |
GAATGATATGTGATGAAGGG+GGG | + | chr7.3:65065951-65065970 | MS.gene25003:CDS | 40.0% | |
GACCGTAAGATTAAGGTTAG+AGG | + | chr7.3:65065657-65065676 | MS.gene25003:CDS | 40.0% | |
GCATAGTATTCTCCTGAACT+AGG | - | chr7.3:65066625-65066644 | None:intergenic | 40.0% | |
GTAGATCATTCTCAACGACT+CGG | - | chr7.3:65066389-65066408 | None:intergenic | 40.0% | |
TAAAATCCGATGATCCCGAA+TGG | + | chr7.3:65065544-65065563 | MS.gene25003:CDS | 40.0% | |
TACTGTAATGGTTGTGTTCC+TGG | + | chr7.3:65065717-65065736 | MS.gene25003:CDS | 40.0% | |
TCATTTCGAGATGATTTCGG+GGG | + | chr7.3:65066646-65066665 | MS.gene25003:CDS | 40.0% | |
TCGGAACTCATGTGTTTACT+TGG | - | chr7.3:65065977-65065996 | None:intergenic | 40.0% | |
TGATGAGGTTCCTGAAACAT+TGG | - | chr7.3:65066132-65066151 | None:intergenic | 40.0% | |
TGGTCATGACCGTAAGATTA+AGG | + | chr7.3:65065650-65065669 | MS.gene25003:CDS | 40.0% | |
TGTTTGCAAGTTCGAACCTT+GGG | + | chr7.3:65065424-65065443 | MS.gene25003:CDS | 40.0% | |
TTTAACAGAAGGACACAGTG+TGG | + | chr7.3:65065612-65065631 | MS.gene25003:CDS | 40.0% | |
TTTACAGTGTGGCAATGTTC+TGG | + | chr7.3:65066573-65066592 | MS.gene25003:intron | 40.0% | |
! | AGCAGCTCTTTTTGACATGA+AGG | - | chr7.3:65066797-65066816 | None:intergenic | 40.0% |
! | AGCTCTTTTTGACATGAAGG+TGG | - | chr7.3:65066794-65066813 | None:intergenic | 40.0% |
! | AGTCCTCTACGAAATTTTGG+AGG | - | chr7.3:65065873-65065892 | None:intergenic | 40.0% |
! | TACCACCTTTGATGATAACC+AGG | + | chr7.3:65065776-65065795 | MS.gene25003:CDS | 40.0% |
! | TCCGTTTGAAACTATTGACG+AGG | + | chr7.3:65066272-65066291 | MS.gene25003:CDS | 40.0% |
! | TCCTGGTGTTAAAAGCAACT+GGG | + | chr7.3:65065734-65065753 | MS.gene25003:CDS | 40.0% |
! | TGCTTCTTGATTTTCGCGAT+CGG | - | chr7.3:65065996-65066015 | None:intergenic | 40.0% |
! | TTCCTGGTGTTAAAAGCAAC+TGG | + | chr7.3:65065733-65065752 | MS.gene25003:CDS | 40.0% |
! | TTGTTTCTTCGTAGAGTGGA+AGG | - | chr7.3:65066748-65066767 | None:intergenic | 40.0% |
AATCTTACGGTCATGACCAG+TGG | - | chr7.3:65065649-65065668 | None:intergenic | 45.0% | |
ACACAATTGATCATCTCCCG+AGG | - | chr7.3:65066709-65066728 | None:intergenic | 45.0% | |
ACTCGACTGCAGATAAACCT+CGG | + | chr7.3:65066689-65066708 | MS.gene25003:CDS | 45.0% | |
AGATGATTTCGGGGGATTTG+AGG | + | chr7.3:65066654-65066673 | MS.gene25003:CDS | 45.0% | |
AGCCGAGAAAAAAGCTGAAG+AGG | + | chr7.3:65065919-65065938 | MS.gene25003:CDS | 45.0% | |
CAAGCTCTTCATCTGTTGGT+TGG | - | chr7.3:65065334-65065353 | None:intergenic | 45.0% | |
GGTTGGAATCTGAATCCAAC+AGG | - | chr7.3:65065317-65065336 | None:intergenic | 45.0% | |
! | AAGTACTTTTCGGCCTGATG+AGG | - | chr7.3:65066147-65066166 | None:intergenic | 45.0% |
! | CTTTTTGACATGAAGGTGGC+TGG | - | chr7.3:65066790-65066809 | None:intergenic | 45.0% |
! | TTTTTACCCGGTAAGTCCCA+AGG | - | chr7.3:65065443-65065462 | None:intergenic | 45.0% |
!!! | ACCCAGTTGCTTTTAACACC+AGG | - | chr7.3:65065738-65065757 | None:intergenic | 45.0% |
ATCTGCAGTCGAGTCACAAG+AGG | - | chr7.3:65066683-65066702 | None:intergenic | 50.0% | |
CTCGACTGCAGATAAACCTC+GGG | + | chr7.3:65066690-65066709 | MS.gene25003:CDS | 50.0% | |
GAAGGACACAGTGTGGATAC+TGG | + | chr7.3:65065619-65065638 | MS.gene25003:CDS | 50.0% | |
GTTCGAACCTTGGGACTTAC+CGG | + | chr7.3:65065433-65065452 | MS.gene25003:CDS | 50.0% | |
TGTGGATACTGGAAAGCCAC+TGG | + | chr7.3:65065630-65065649 | MS.gene25003:CDS | 50.0% | |
TTCGAACCTTGGGACTTACC+GGG | + | chr7.3:65065434-65065453 | MS.gene25003:CDS | 50.0% | |
! | TCATTCTCAACGACTCGGAC+TGG | - | chr7.3:65066384-65066403 | None:intergenic | 50.0% |
!! | TGGCTGGTCTTGGATGATAC+TGG | - | chr7.3:65066774-65066793 | None:intergenic | 50.0% |
!! | GACATGAAGGTGGCTGGTCT+TGG | - | chr7.3:65066784-65066803 | None:intergenic | 55.0% |
! | CTCAACGACTCGGACTGGAC+AGG | - | chr7.3:65066379-65066398 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 65065299 | 65066837 | 65065299 | ID=MS.gene25003 |
chr7.3 | mRNA | 65065299 | 65066837 | 65065299 | ID=MS.gene25003.t1;Parent=MS.gene25003 |
chr7.3 | exon | 65065299 | 65065455 | 65065299 | ID=MS.gene25003.t1.exon1;Parent=MS.gene25003.t1 |
chr7.3 | CDS | 65065299 | 65065455 | 65065299 | ID=cds.MS.gene25003.t1;Parent=MS.gene25003.t1 |
chr7.3 | exon | 65065532 | 65065797 | 65065532 | ID=MS.gene25003.t1.exon2;Parent=MS.gene25003.t1 |
chr7.3 | CDS | 65065532 | 65065797 | 65065532 | ID=cds.MS.gene25003.t1;Parent=MS.gene25003.t1 |
chr7.3 | exon | 65065887 | 65066033 | 65065887 | ID=MS.gene25003.t1.exon3;Parent=MS.gene25003.t1 |
chr7.3 | CDS | 65065887 | 65066033 | 65065887 | ID=cds.MS.gene25003.t1;Parent=MS.gene25003.t1 |
chr7.3 | exon | 65066120 | 65066383 | 65066120 | ID=MS.gene25003.t1.exon4;Parent=MS.gene25003.t1 |
chr7.3 | CDS | 65066120 | 65066383 | 65066120 | ID=cds.MS.gene25003.t1;Parent=MS.gene25003.t1 |
chr7.3 | exon | 65066580 | 65066837 | 65066580 | ID=MS.gene25003.t1.exon5;Parent=MS.gene25003.t1 |
chr7.3 | CDS | 65066580 | 65066837 | 65066580 | ID=cds.MS.gene25003.t1;Parent=MS.gene25003.t1 |
Gene Sequence |
Protein sequence |