AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25007

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25007.t1 MTR_8g023860 88.755 249 22 1 12 254 62 310 4.51e-148 429
MS.gene25007.t1 MTR_8g023860 83.784 222 30 1 250 465 198 419 8.55e-125 369
MS.gene25007.t1 MTR_8g023840 63.636 264 75 5 10 254 59 320 5.34e-100 305
MS.gene25007.t1 MTR_8g023840 51.709 234 62 5 250 465 198 398 2.91e-60 202
MS.gene25007.t1 MTR_8g023930 67.442 215 62 2 12 218 74 288 1.24e-98 304
MS.gene25007.t1 MTR_8g023930 51.250 80 31 2 250 321 210 289 5.42e-16 80.5
MS.gene25007.t1 MTR_8g023900 64.840 219 68 3 12 221 243 461 7.52e-96 297
MS.gene25007.t1 MTR_8g023900 65.323 124 41 2 12 133 62 185 1.34e-49 176
MS.gene25007.t1 MTR_8g023900 40.000 130 61 5 202 323 341 461 3.54e-17 84.0
MS.gene25007.t1 MTR_5g069030 40.223 179 80 7 12 179 74 236 5.00e-31 126
MS.gene25007.t1 MTR_3g093040 50.000 122 49 4 12 127 157 272 4.67e-30 119
MS.gene25007.t1 MTR_3g093050 53.636 110 43 3 12 115 71 178 1.94e-29 121
MS.gene25007.t1 MTR_3g093050 53.636 110 43 3 12 115 71 178 2.25e-29 121
MS.gene25007.t1 MTR_8g023880 37.778 225 101 9 12 218 57 260 3.74e-27 110
MS.gene25007.t1 MTR_6g477900 49.038 104 45 4 12 109 55 156 4.33e-24 100
MS.gene25007.t1 MTR_5g014300 43.478 115 57 3 12 118 55 169 3.83e-23 100
MS.gene25007.t1 MTR_3g064580 39.394 132 71 3 12 136 55 184 4.24e-22 99.8
MS.gene25007.t1 MTR_4g098630 40.994 161 77 7 12 160 55 209 2.61e-21 94.7
MS.gene25007.t1 MTR_3g109340 45.545 101 51 2 14 110 71 171 3.33e-21 95.1
MS.gene25007.t1 MTR_2g064090 43.396 106 51 3 12 110 55 158 6.89e-21 94.0
MS.gene25007.t1 MTR_1g090723 36.170 188 88 9 12 188 58 224 1.29e-20 95.1
MS.gene25007.t1 MTR_5g076850 42.857 105 52 3 12 110 55 157 1.93e-20 94.7
MS.gene25007.t1 MTR_1g090723 35.829 187 89 9 12 188 58 223 3.28e-20 94.0
MS.gene25007.t1 MTR_1g090723 35.829 187 89 9 12 188 58 223 3.35e-20 94.0
MS.gene25007.t1 MTR_3g109340 45.098 102 51 3 14 110 71 172 4.06e-20 92.0
MS.gene25007.t1 MTR_8g063550 40.385 104 54 4 12 109 55 156 1.10e-19 91.7
MS.gene25007.t1 MTR_8g063550 40.385 104 54 4 12 109 55 156 1.10e-19 90.5
MS.gene25007.t1 MTR_4g036030 42.718 103 53 3 11 109 56 156 2.22e-19 89.7
MS.gene25007.t1 MTR_8g063550 40.385 104 54 4 12 109 55 156 2.51e-19 90.5
MS.gene25007.t1 MTR_7g011130 53.165 79 34 3 13 90 67 143 2.71e-19 89.4
MS.gene25007.t1 MTR_8g093580 40.385 104 54 4 12 109 55 156 3.46e-19 90.5
MS.gene25007.t1 MTR_5g012080 40.000 120 62 4 11 123 56 172 3.99e-19 89.0
MS.gene25007.t1 MTR_1g097300 39.850 133 56 5 12 124 68 196 4.63e-19 90.5
MS.gene25007.t1 MTR_4g035590 43.810 105 48 4 11 109 57 156 4.94e-19 88.6
MS.gene25007.t1 MTR_3g096140 38.462 104 56 4 12 109 56 157 4.96e-19 87.4
MS.gene25007.t1 MTR_1g069805 40.594 101 58 2 13 111 58 158 5.20e-19 87.4
MS.gene25007.t1 MTR_4g075980 44.898 98 52 2 15 110 65 162 6.32e-19 87.4
MS.gene25007.t1 MTR_2g064470 40.541 111 57 3 20 123 64 172 6.53e-19 87.4
MS.gene25007.t1 MTR_1g096430 41.748 103 54 3 11 109 56 156 6.56e-19 88.2
MS.gene25007.t1 MTR_3g096140 38.462 104 56 4 12 109 35 136 6.76e-19 88.2
MS.gene25007.t1 MTR_8g467490 37.815 119 59 3 13 116 62 180 7.32e-19 88.6
MS.gene25007.t1 MTR_3g096140 38.462 104 56 4 12 109 56 157 9.19e-19 87.8
MS.gene25007.t1 MTR_6g032770 48.718 78 39 1 14 90 67 144 9.25e-19 88.2
MS.gene25007.t1 MTR_7g085260 49.367 79 37 2 14 89 66 144 1.30e-18 87.8
MS.gene25007.t1 MTR_0036s0150 44.231 104 51 3 12 110 55 156 1.41e-18 88.6
MS.gene25007.t1 MTR_3g435150 44.762 105 48 5 14 110 65 167 1.77e-18 86.3
MS.gene25007.t1 MTR_2g086880 42.574 101 52 4 12 111 67 162 1.86e-18 88.6
MS.gene25007.t1 MTR_2g086880 36.434 129 76 4 12 139 67 190 2.26e-18 88.2
MS.gene25007.t1 MTR_3g070030 34.682 173 89 8 13 176 67 224 2.60e-18 86.7
MS.gene25007.t1 MTR_8g094580 32.500 160 77 7 20 159 8 156 3.38e-18 84.0
MS.gene25007.t1 MTR_6g084430 43.810 105 51 5 20 118 60 162 3.84e-18 85.5
MS.gene25007.t1 MTR_4g108760 42.857 105 50 5 14 110 66 168 4.24e-18 85.9
MS.gene25007.t1 MTR_4g134460 44.211 95 48 3 20 110 109 202 4.60e-18 86.7
MS.gene25007.t1 MTR_7g011120 51.899 79 35 3 13 90 56 132 5.20e-18 85.1
MS.gene25007.t1 MTR_2g062730 29.381 194 112 7 11 189 59 242 5.53e-18 85.5
MS.gene25007.t1 MTR_8g076110 39.806 103 56 3 11 109 55 155 7.05e-18 84.7
MS.gene25007.t1 MTR_5g040420 33.333 135 76 2 20 140 69 203 7.59e-18 85.5
MS.gene25007.t1 MTR_8g094580 32.500 160 77 7 20 159 62 210 9.12e-18 84.0
MS.gene25007.t1 MTR_2g080010 35.185 108 53 2 20 110 70 177 9.14e-18 84.7
MS.gene25007.t1 MTR_1g090720 39.091 110 53 3 12 109 91 198 9.68e-18 85.9
MS.gene25007.t1 MTR_4g101680 36.667 120 68 4 11 124 56 173 9.87e-18 85.1
MS.gene25007.t1 MTR_7g097090 41.237 97 55 2 13 107 58 154 1.03e-17 84.0
MS.gene25007.t1 MTR_7g085220 38.739 111 47 4 20 111 63 171 1.12e-17 84.3
MS.gene25007.t1 MTR_7g100990 41.000 100 49 3 20 109 66 165 6.10e-17 82.0
MS.gene25007.t1 MTR_2g078700 48.718 78 39 1 14 90 72 149 6.87e-17 82.4
MS.gene25007.t1 MTR_8g024480 36.364 143 60 6 11 126 64 202 7.17e-17 82.8
MS.gene25007.t1 MTR_5g021710 40.777 103 55 3 11 109 57 157 8.07e-17 82.0
MS.gene25007.t1 MTR_8g059170 34.375 160 90 7 20 168 69 224 8.78e-17 81.6
MS.gene25007.t1 MTR_2g093810 43.564 101 47 3 20 110 69 169 9.37e-17 81.6
MS.gene25007.t1 MTR_6g011860 38.938 113 53 4 13 110 63 174 1.01e-16 82.0
MS.gene25007.t1 MTR_4g089135 40.964 83 48 1 20 101 70 152 1.11e-16 81.6
MS.gene25007.t1 MTR_2g079990 34.932 146 78 6 20 156 71 208 1.26e-16 81.6
MS.gene25007.t1 MTR_4g081870 44.118 102 41 5 20 109 64 161 1.37e-16 80.1
MS.gene25007.t1 MTR_1g008740 39.216 102 57 3 14 110 77 178 2.50e-16 80.9
MS.gene25007.t1 MTR_1g008740 39.216 102 57 3 14 110 63 164 2.58e-16 80.5
MS.gene25007.t1 MTR_2157s0010 38.318 107 50 4 20 110 63 169 2.73e-16 79.3
MS.gene25007.t1 MTR_3g116070 39.604 101 51 2 13 103 72 172 5.92e-16 79.3
MS.gene25007.t1 MTR_3g096920 40.000 105 45 4 20 112 62 160 7.08e-16 78.6
MS.gene25007.t1 MTR_8g099750 39.604 101 50 2 17 106 64 164 1.31e-15 76.3
MS.gene25007.t1 MTR_6g012670 45.263 95 43 4 20 113 75 161 1.35e-15 78.2
MS.gene25007.t1 MTR_3g088110 39.394 99 48 3 20 109 62 157 1.61e-15 77.4
MS.gene25007.t1 MTR_5g041940 38.393 112 57 5 20 121 58 167 1.98e-15 76.6
MS.gene25007.t1 MTR_7g005280 37.000 100 59 2 20 115 67 166 2.52e-15 76.3
MS.gene25007.t1 MTR_3g096920 47.222 72 34 2 20 90 62 130 9.08e-15 75.5
MS.gene25007.t1 MTR_7g070140 30.282 142 79 4 7 146 5 128 9.11e-15 71.6
MS.gene25007.t1 MTR_7g105170 35.849 106 56 3 17 111 62 166 9.84e-15 74.3
MS.gene25007.t1 MTR_2g068920 35.780 109 51 3 20 109 77 185 3.24e-14 73.6
MS.gene25007.t1 MTR_3g070040 39.423 104 51 4 25 118 65 166 3.47e-14 73.9
MS.gene25007.t1 MTR_2g079990 46.479 71 35 2 20 89 71 139 4.55e-14 73.9
MS.gene25007.t1 MTR_2g068880 33.974 156 76 5 14 142 72 227 4.79e-14 73.2
MS.gene25007.t1 MTR_4g052620 35.922 103 56 3 13 106 58 159 7.08e-14 72.0
MS.gene25007.t1 MTR_2g086690 36.634 101 54 3 15 106 60 159 3.22e-13 69.7
MS.gene25007.t1 MTR_5g090970 28.505 214 119 7 20 202 72 282 4.03e-12 67.4
MS.gene25007.t1 MTR_5g090970 28.505 214 119 7 20 202 73 283 4.54e-12 67.4
MS.gene25007.t1 MTR_3g098810 34.259 108 57 3 22 115 69 176 2.69e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25007.t1 AT4G01550 50.360 139 56 4 3 135 45 176 7.05e-34 132
MS.gene25007.t1 AT4G01520 37.288 177 91 6 14 178 57 225 5.29e-28 113
MS.gene25007.t1 AT3G49530 50.926 108 42 4 12 111 62 166 1.51e-27 114
MS.gene25007.t1 AT3G49530 50.926 108 42 4 12 111 62 166 2.90e-27 114
MS.gene25007.t1 AT4G35580 49.074 108 47 3 12 113 58 163 3.98e-27 114
MS.gene25007.t1 AT4G01540 37.288 177 91 6 14 178 57 225 4.16e-27 113
MS.gene25007.t1 AT4G01540 37.288 177 91 6 14 178 57 225 4.23e-27 112
MS.gene25007.t1 AT4G35580 49.074 108 47 3 12 113 58 163 4.36e-27 114
MS.gene25007.t1 AT4G01540 37.288 177 91 6 14 178 57 225 4.93e-27 113
MS.gene25007.t1 AT4G35580 49.074 108 47 3 12 113 58 163 5.49e-27 114
MS.gene25007.t1 AT4G01540 37.288 177 91 6 14 178 57 225 6.64e-27 113
MS.gene25007.t1 AT5G24590 50.000 106 46 3 12 111 62 166 6.71e-27 113
MS.gene25007.t1 AT1G33060 51.923 104 42 3 12 109 73 174 1.63e-25 110
MS.gene25007.t1 AT1G33060 51.923 104 42 3 12 109 73 174 1.72e-25 110
MS.gene25007.t1 AT4G17980 47.222 108 49 2 12 111 55 162 1.13e-24 103
MS.gene25007.t1 AT4G17980 47.222 108 49 2 12 111 55 162 1.83e-24 103
MS.gene25007.t1 AT3G10480 43.243 111 54 3 6 109 103 211 1.10e-23 104
MS.gene25007.t1 AT3G10490 44.444 108 51 3 9 109 73 178 2.30e-23 99.0
MS.gene25007.t1 AT3G10480 43.925 107 52 3 9 109 73 177 3.62e-23 102
MS.gene25007.t1 AT3G10480 43.519 108 52 3 9 109 73 178 3.69e-23 102
MS.gene25007.t1 AT3G10490 44.444 108 51 3 9 109 73 178 4.50e-23 101
MS.gene25007.t1 AT3G17730 43.443 122 57 5 12 123 55 174 8.40e-23 97.4
MS.gene25007.t1 AT5G17260 46.667 105 47 3 12 109 55 157 4.41e-22 99.0
MS.gene25007.t1 AT5G46590 48.182 110 49 4 12 114 55 163 5.68e-22 96.3
MS.gene25007.t1 AT1G65910 46.667 105 48 3 12 110 55 157 3.44e-21 97.1
MS.gene25007.t1 AT3G03200 44.762 105 49 3 12 109 55 157 6.02e-21 95.9
MS.gene25007.t1 AT1G62700 43.689 103 52 3 11 109 56 156 7.91e-21 94.7
MS.gene25007.t1 AT1G62700 43.689 103 52 3 11 109 56 156 7.91e-21 94.7
MS.gene25007.t1 AT1G32510 42.857 119 52 4 12 116 55 171 1.09e-20 92.4
MS.gene25007.t1 AT1G12260 40.000 115 63 3 11 121 56 168 2.03e-20 93.2
MS.gene25007.t1 AT1G12260 40.000 115 63 3 11 121 56 168 2.51e-20 92.4
MS.gene25007.t1 AT5G04410 43.396 106 50 4 12 110 58 160 7.05e-20 92.8
MS.gene25007.t1 AT3G10500 44.762 105 50 4 12 110 58 160 2.60e-19 91.3
MS.gene25007.t1 AT1G33280 44.118 102 52 3 11 109 57 156 2.69e-19 88.6
MS.gene25007.t1 AT5G46590 52.500 80 36 2 12 90 55 133 4.13e-19 87.8
MS.gene25007.t1 AT4G27410 35.526 152 76 7 20 160 69 209 4.24e-19 88.2
MS.gene25007.t1 AT3G12977 39.200 125 61 5 20 134 20 139 4.63e-19 86.3
MS.gene25007.t1 AT1G76420 40.566 106 52 3 13 110 70 172 5.02e-19 88.6
MS.gene25007.t1 AT2G24430 41.748 103 55 3 14 111 65 167 5.78e-19 87.8
MS.gene25007.t1 AT2G24430 41.748 103 55 3 14 111 65 167 5.78e-19 87.8
MS.gene25007.t1 AT1G71930 41.905 105 55 3 9 109 56 158 6.06e-19 88.2
MS.gene25007.t1 AT1G71930 41.905 105 55 3 9 109 56 158 6.06e-19 88.2
MS.gene25007.t1 AT3G15510 37.097 124 59 4 20 124 72 195 6.85e-19 88.6
MS.gene25007.t1 AT5G61430 42.453 106 51 5 13 110 1 104 7.37e-19 87.0
MS.gene25007.t1 AT4G27410 35.526 152 76 7 20 160 86 226 7.62e-19 87.4
MS.gene25007.t1 AT5G62380 32.768 177 99 6 11 178 56 221 1.24e-18 87.4
MS.gene25007.t1 AT5G62380 32.768 177 99 6 11 178 56 221 1.24e-18 87.4
MS.gene25007.t1 AT3G15500 34.375 160 89 7 20 170 69 221 1.31e-18 87.0
MS.gene25007.t1 AT4G10350 37.984 129 71 4 1 122 1 127 1.38e-18 86.7
MS.gene25007.t1 AT5G39610 42.308 104 50 4 14 109 69 170 1.41e-18 86.3
MS.gene25007.t1 AT5G61430 42.453 106 51 5 13 110 64 167 1.68e-18 87.0
MS.gene25007.t1 AT3G12977 38.400 125 62 4 20 134 73 192 1.84e-18 85.9
MS.gene25007.t1 AT2G17040 40.909 110 57 3 20 121 61 170 2.55e-18 85.5
MS.gene25007.t1 AT1G79580 42.157 102 55 3 11 109 66 166 2.72e-18 86.7
MS.gene25007.t1 AT1G79580 42.157 102 55 3 11 109 66 166 2.72e-18 86.7
MS.gene25007.t1 AT1G79580 42.157 102 55 3 11 109 66 166 2.72e-18 86.7
MS.gene25007.t1 AT1G79580 42.157 102 55 3 11 109 66 166 2.72e-18 86.7
MS.gene25007.t1 AT1G79580 42.157 102 55 3 11 109 66 166 2.72e-18 86.7
MS.gene25007.t1 AT3G15170 43.810 105 51 3 14 110 69 173 2.92e-18 85.9
MS.gene25007.t1 AT1G26870 42.453 106 46 3 20 110 71 176 2.98e-18 87.0
MS.gene25007.t1 AT3G44290 42.574 101 52 4 12 111 63 158 3.35e-18 84.0
MS.gene25007.t1 AT3G04060 40.952 105 53 4 13 109 68 171 3.40e-18 85.9
MS.gene25007.t1 AT2G02450 38.095 126 63 4 20 141 106 220 4.00e-18 86.3
MS.gene25007.t1 AT2G02450 38.095 126 63 4 20 141 106 220 4.38e-18 86.7
MS.gene25007.t1 AT5G39820 50.000 78 38 1 20 96 75 152 5.22e-18 85.5
MS.gene25007.t1 AT1G34190 42.056 107 50 4 12 110 65 167 5.35e-18 87.0
MS.gene25007.t1 AT2G27300 35.294 136 79 5 12 143 63 193 5.45e-18 85.5
MS.gene25007.t1 AT5G07680 42.453 106 49 5 14 110 52 154 7.00e-18 84.7
MS.gene25007.t1 AT5G07680 42.453 106 49 5 14 110 66 168 7.54e-18 84.7
MS.gene25007.t1 AT5G22290 30.729 192 112 8 12 197 70 246 8.85e-18 84.7
MS.gene25007.t1 AT3G18400 44.118 102 48 4 20 114 60 159 9.17e-18 84.3
MS.gene25007.t1 AT1G34180 40.000 115 60 4 3 110 67 179 9.46e-18 85.9
MS.gene25007.t1 AT1G56010 41.414 99 47 3 20 109 8 104 1.03e-17 83.2
MS.gene25007.t1 AT4G28530 39.604 101 59 2 13 111 74 174 1.07e-17 84.7
MS.gene25007.t1 AT3G44290 42.574 101 52 4 12 111 63 158 1.14e-17 84.3
MS.gene25007.t1 AT1G34180 41.905 105 53 3 12 110 65 167 1.34e-17 85.5
MS.gene25007.t1 AT4G10350 39.496 119 63 4 11 122 58 174 1.40e-17 84.3
MS.gene25007.t1 AT1G69490 43.000 100 45 4 20 109 64 161 1.41e-17 83.2
MS.gene25007.t1 AT1G52890 37.931 116 60 4 20 127 69 180 1.67e-17 83.6
MS.gene25007.t1 AT5G18270 31.551 187 106 7 12 187 68 243 1.70e-17 84.0
MS.gene25007.t1 AT1G34180 40.000 115 60 4 3 110 67 179 1.80e-17 85.5
MS.gene25007.t1 AT1G56010 41.414 99 47 3 20 109 75 171 1.94e-17 83.6
MS.gene25007.t1 AT2G18060 38.596 114 64 3 11 120 58 169 1.96e-17 84.0
MS.gene25007.t1 AT2G18060 38.596 114 64 3 11 120 58 169 1.96e-17 84.0
MS.gene25007.t1 AT5G66300 39.423 104 56 3 11 109 61 162 1.99e-17 83.2
MS.gene25007.t1 AT3G29035 50.649 77 35 3 14 89 73 147 2.37e-17 83.2
MS.gene25007.t1 AT1G34180 41.905 105 53 3 12 110 65 167 2.44e-17 85.1
MS.gene25007.t1 AT5G18270 31.351 185 105 7 14 187 70 243 2.77e-17 83.2
MS.gene25007.t1 AT3G04070 41.121 107 47 3 20 110 65 171 2.98e-17 83.2
MS.gene25007.t1 AT5G08790 39.604 101 47 4 20 109 62 159 7.79e-17 81.3
MS.gene25007.t1 AT4G36160 39.423 104 57 3 10 109 58 159 9.53e-17 82.0
MS.gene25007.t1 AT4G36160 39.423 104 57 3 10 109 58 159 9.53e-17 82.0
MS.gene25007.t1 AT4G36160 39.423 104 57 3 10 109 62 163 1.05e-16 82.0
MS.gene25007.t1 AT1G54330 44.554 101 51 3 12 109 55 153 1.91e-16 80.1
MS.gene25007.t1 AT1G77450 34.074 135 69 4 20 137 65 196 2.11e-16 79.3
MS.gene25007.t1 AT5G09330 39.423 104 55 3 12 109 55 156 4.19e-16 80.9
MS.gene25007.t1 AT5G09330 39.423 104 55 3 12 109 55 156 4.19e-16 80.9
MS.gene25007.t1 AT5G09330 39.423 104 55 3 12 109 55 156 4.19e-16 80.9
MS.gene25007.t1 AT5G09330 39.423 104 55 3 12 109 55 156 4.19e-16 80.9
MS.gene25007.t1 AT5G09330 39.423 104 55 3 12 109 55 156 4.19e-16 80.9
MS.gene25007.t1 AT5G53950 49.351 77 38 1 14 89 66 142 4.34e-16 80.1
MS.gene25007.t1 AT1G01720 40.000 100 47 4 20 109 62 158 4.42e-16 79.0
MS.gene25007.t1 AT3G61910 31.875 160 75 6 11 148 60 207 6.49e-16 79.3
MS.gene25007.t1 AT5G64060 37.383 107 53 4 12 109 55 156 6.59e-16 79.3
MS.gene25007.t1 AT3G10490 46.250 80 34 3 37 109 1 78 7.39e-16 79.3
MS.gene25007.t1 AT3G10490 46.250 80 34 3 37 109 1 78 7.39e-16 79.3
MS.gene25007.t1 AT5G63790 36.290 124 54 5 20 121 115 235 1.64e-15 77.8
MS.gene25007.t1 AT5G63790 36.290 124 54 5 20 121 105 225 1.68e-15 77.8
MS.gene25007.t1 AT2G46770 36.441 118 54 4 11 109 65 180 1.76e-15 78.2
MS.gene25007.t1 AT3G04070 48.649 74 34 2 20 89 65 138 1.84e-15 78.2
MS.gene25007.t1 AT5G22380 38.000 100 53 3 15 106 61 159 2.35e-15 75.9
MS.gene25007.t1 AT1G61110 37.963 108 48 4 20 109 71 177 8.82e-15 75.5
MS.gene25007.t1 AT5G04395 43.750 80 43 2 13 90 89 168 9.68e-15 72.8
MS.gene25007.t1 AT1G02230 37.864 103 60 3 12 112 54 154 1.39e-14 75.5
MS.gene25007.t1 AT1G32770 37.607 117 51 5 11 109 65 177 2.63e-14 74.7
MS.gene25007.t1 AT5G13180 36.842 95 55 2 20 109 66 160 5.07e-14 72.4
MS.gene25007.t1 AT1G32870 40.187 107 52 5 12 110 59 161 2.75e-13 72.4
MS.gene25007.t1 AT1G32870 40.187 107 52 5 12 110 59 161 2.89e-13 72.4
MS.gene25007.t1 AT2G43000 31.429 140 80 5 20 145 73 210 2.93e-13 70.5
MS.gene25007.t1 AT2G33480 36.735 98 54 3 18 109 8 103 3.37e-13 68.9
MS.gene25007.t1 AT2G33480 38.298 94 52 3 20 109 67 158 3.64e-13 70.1
MS.gene25007.t1 AT3G44350 33.981 103 60 3 15 110 60 161 3.73e-13 69.7
MS.gene25007.t1 AT1G52880 31.646 158 86 5 20 161 72 223 4.06e-13 70.5
MS.gene25007.t1 AT1G32870 40.187 107 52 5 12 110 95 197 4.44e-13 71.6
MS.gene25007.t1 AT3G12910 30.986 142 79 3 15 137 72 213 5.25e-13 70.1
MS.gene25007.t1 AT2G33480 37.500 96 52 3 20 109 67 160 6.47e-13 69.3
MS.gene25007.t1 AT3G04420 37.624 101 60 3 12 111 54 152 1.60e-12 68.6
MS.gene25007.t1 AT3G04420 37.624 101 60 3 12 111 54 152 1.91e-12 68.9
MS.gene25007.t1 AT1G02220 38.542 96 55 3 12 107 54 145 2.47e-12 68.9
MS.gene25007.t1 AT3G44350 39.474 76 44 2 15 89 60 134 2.56e-12 65.1
MS.gene25007.t1 AT1G01010 38.318 107 57 3 12 111 54 158 5.10e-12 68.2
MS.gene25007.t1 AT1G02250 26.482 253 153 6 12 255 54 282 5.77e-11 64.3

Find 75 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATTCCATATTTATTTC+TGG 0.145339 8.1:+76980717 None:intergenic
ATTGATTCCATATTTATTTC+TGG 0.145339 8.1:+76981174 None:intergenic
AGTACCTTTCGAGATGATTT+TGG 0.182200 8.1:-76979962 MS.gene25007:CDS
AGGGGTAGCAATAATATTAT+TGG 0.231520 8.1:-76982134 MS.gene25007:CDS
GCATCGTGAATTGGCGAGTT+TGG 0.245634 8.1:+76980630 None:intergenic
AAATATGGAATCAATATTTC+AGG 0.281347 8.1:-76980709 MS.gene25007:CDS
AAATATGGAATCAATATTTC+AGG 0.281347 8.1:-76981166 MS.gene25007:CDS
AATGATTATTGACAGGGATT+TGG 0.289338 8.1:-76980989 MS.gene25007:CDS
GCATCGTGAAGTGGCGAGTT+TGG 0.289715 8.1:+76981087 None:intergenic
AATGATTATTGACGGGGATT+TGG 0.293193 8.1:-76980532 MS.gene25007:CDS
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8.1:+76980608 None:intergenic
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8.1:+76981065 None:intergenic
TACTATAGTGGTCGTGTTCC+TGG 0.304206 8.1:-76982092 MS.gene25007:CDS
TTTAAAAGGACAACTAATAA+TGG 0.327657 8.1:-76982197 MS.gene25007:CDS
GGGGTAGCAATAATATTATT+GGG 0.331309 8.1:-76982133 MS.gene25007:CDS
TTCAACTGCAGATATATCTT+TGG 0.332842 8.1:-76979915 MS.gene25007:CDS
TGGAAAGGATCGAAAGATTA+AGG 0.337849 8.1:-76982159 MS.gene25007:CDS
CTAAAATAGGCATCGTGAAT+TGG 0.340882 8.1:+76980621 None:intergenic
CAAAGAGTAAGAGGTTTAAA+AGG 0.342416 8.1:-76982211 MS.gene25007:CDS
CATCGTGAATTGGCGAGTTT+GGG 0.364030 8.1:+76980631 None:intergenic
TCAACGCATGGTAATGTTCC+TGG 0.366029 8.1:-76980037 MS.gene25007:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8.1:-76980724 MS.gene25007:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8.1:-76981181 MS.gene25007:CDS
CATCGTGAAGTGGCGAGTTT+GGG 0.375477 8.1:+76981088 None:intergenic
TCCTCTTCAATGGTTTCAAA+TGG 0.379573 8.1:+76980573 None:intergenic
TCCTCTTCAATGGTTTCAAA+TGG 0.379573 8.1:+76981030 None:intergenic
GAACTTATCTTCCTCTTCAA+TGG 0.381281 8.1:+76981020 None:intergenic
GGATCGAAAGATTAAGGTTA+GGG 0.381317 8.1:-76982153 MS.gene25007:CDS
GATAGAAAACAGGTGCTTCC+AGG 0.383330 8.1:+76980019 None:intergenic
ATAAGTATGCAAAGAGTAAG+AGG 0.388091 8.1:-76982220 MS.gene25007:CDS
TTTGCATACTTATAATCAAT+AGG 0.393689 8.1:+76982230 None:intergenic
TTTCTTGAACATCCTAGTTC+AGG 0.400954 8.1:-76980088 MS.gene25007:CDS
GAACTTATCTTCCTCTTCAA+TGG 0.404183 8.1:+76980563 None:intergenic
TACTTGCATACATCAACTTC+AGG 0.414938 8.1:+76982402 None:intergenic
AAGACTCTTGTTTACTATAG+TGG 0.415807 8.1:-76982104 MS.gene25007:CDS
CCAGTTCGAGTCGTTGAAAA+TGG 0.419694 8.1:-76980953 MS.gene25007:CDS
CCAGTCCGAGTCGTTGAAAA+TGG 0.421990 8.1:-76980496 MS.gene25007:CDS
TGGCTGGTCTTGGATGATAC+TGG 0.429418 8.1:+76979834 None:intergenic
TTCCTGGTGTTAAAAGCAGC+TGG 0.431255 8.1:-76982076 MS.gene25007:CDS
GACATGAAGATGGCTGGTCT+TGG 0.436307 8.1:+76979824 None:intergenic
AGGATCGAAAGATTAAGGTT+AGG 0.440394 8.1:-76982154 MS.gene25007:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.447180 8.1:-76980943 MS.gene25007:CDS
TCAGTTCAATGATTATTGAC+AGG 0.447967 8.1:-76980996 MS.gene25007:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.448952 8.1:-76980486 MS.gene25007:CDS
ATTCTTTAAAGATAGAAAAC+AGG 0.461828 8.1:+76980009 None:intergenic
GTCAGTTCAATGATTATTGA+CGG 0.463736 8.1:-76980540 MS.gene25007:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8.1:-76980664 MS.gene25007:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8.1:-76981121 MS.gene25007:CDS
TCAGTTCAATGATTATTGAC+GGG 0.480425 8.1:-76980539 MS.gene25007:CDS
GATACAGATATATGTGATGA+AGG 0.481936 8.1:-76981389 MS.gene25007:CDS
TCGAAAAGAGCTGCTTTAAG+AGG 0.483514 8.1:-76979803 MS.gene25007:CDS
GCAGAGTATTCGCCTGAACT+AGG 0.495091 8.1:+76980076 None:intergenic
TCGGAACTCATGTGTCTACT+TGG 0.499283 8.1:+76981362 None:intergenic
CAGTTCAATGATTATTGACA+GGG 0.506953 8.1:-76980995 MS.gene25007:CDS
TCCATTTGAAACCATTGAAG+AGG 0.526651 8.1:-76980574 MS.gene25007:CDS
TCCATTTGAAACCATTGAAG+AGG 0.526651 8.1:-76981031 MS.gene25007:CDS
ACAAACCTTGTCATCTTCAA+AGG 0.536374 8.1:+76982028 None:intergenic
GGAATCAATATTTCAGGCAC+AGG 0.539733 8.1:-76981160 MS.gene25007:CDS
ATACAGATATATGTGATGAA+GGG 0.548662 8.1:-76981388 MS.gene25007:CDS
CTAAAATAGGCATCGTGAAG+TGG 0.556105 8.1:+76981078 None:intergenic
GTGAATTGGCGAGTTTGGGA+TGG 0.564115 8.1:+76980635 None:intergenic
TAAAATCAGATGACCCAGAA+TGG 0.564520 8.1:-76982265 MS.gene25007:CDS
CAGTTCAATGATTATTGACG+GGG 0.578711 8.1:-76980538 MS.gene25007:CDS
TACAGATATATGTGATGAAG+GGG 0.592526 8.1:-76981387 MS.gene25007:CDS
TCCTGGTGTTAAAAGCAGCT+GGG 0.595945 8.1:-76982075 MS.gene25007:CDS
ATCTGCAGTTGAATCACAAG+AGG 0.597794 8.1:+76979925 None:intergenic
GTGAAGTGGCGAGTTTGGGA+TGG 0.598328 8.1:+76981092 None:intergenic
TTGAAAATGGTCTACTATGG+AGG 0.604864 8.1:-76980940 MS.gene25007:CDS
TACCACCTTTGAAGATGACA+AGG 0.610149 8.1:-76982033 MS.gene25007:intron
AACCTTGTCATCTTCAAAGG+TGG 0.630537 8.1:+76982031 None:intergenic
AAATTGTTGAAATCAACGCA+TGG 0.648209 8.1:-76980049 MS.gene25007:CDS
TGCTGAAGTAGTCTCTACGC+CGG 0.650251 8.1:-76980448 MS.gene25007:intron
TGCTGAAGTAGTCTCTACGC+CGG 0.650251 8.1:-76980905 MS.gene25007:intron
GCTGCTTTAAGAGGATCTTG+AGG 0.651591 8.1:-76979794 None:intergenic
GATCGAAAGATTAAGGTTAG+GGG 0.678144 8.1:-76982152 MS.gene25007:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATGAAAAACATTAAAA+AGG + chr8.1:76979904-76979923 None:intergenic 15.0%
!! ATTTCTATTATCATTTATCA+AGG + chr8.1:76980920-76980939 None:intergenic 15.0%
!! TTTGAACAATATATATTTAC+CGG + chr8.1:76981780-76981799 None:intergenic 15.0%
!!! AGAACTTATATTTGTTTTAT+AGG - chr8.1:76980995-76981014 MS.gene25007:CDS 15.0%
!!! TTACTATTTTCCTATATTAT+TGG - chr8.1:76980363-76980382 MS.gene25007:intron 15.0%
!! AAATATGGAATCAATATTTC+AGG - chr8.1:76981040-76981059 MS.gene25007:CDS 20.0%
!! AAGAAAATAAGCATTATGAA+AGG + chr8.1:76982054-76982073 None:intergenic 20.0%
!! ATATGATACCAAAAGAAAAA+AGG + chr8.1:76980445-76980464 None:intergenic 20.0%
!! TATGATACCAAAAGAAAAAA+GGG + chr8.1:76980444-76980463 None:intergenic 20.0%
!! TTTAAAAGGACAACTAATAA+TGG - chr8.1:76980009-76980028 MS.gene25007:CDS 20.0%
!! TTTGCATACTTATAATCAAT+AGG + chr8.1:76979979-76979998 None:intergenic 20.0%
!!! ACTTATATTTGTTTTATAGG+TGG - chr8.1:76980998-76981017 MS.gene25007:CDS 20.0%
!!! ATAAATTGTGAAAAAGTACT+TGG - chr8.1:76981899-76981918 MS.gene25007:intron 20.0%
!!! ATTCTTTAAAGATAGAAAAC+AGG + chr8.1:76982200-76982219 None:intergenic 20.0%
!!! ATTGATTCCATATTTATTTC+TGG + chr8.1:76981035-76981054 None:intergenic 20.0%
!!! CTTATATTTGTTTTATAGGT+GGG - chr8.1:76980999-76981018 MS.gene25007:CDS 20.0%
!!! TGTTTTCTATCTTTAAAGAA+TGG - chr8.1:76982199-76982218 MS.gene25007:CDS 20.0%
!!! TTGTTTGTTTTTTTTTTACC+TGG + chr8.1:76979846-76979865 None:intergenic 20.0%
!!! TTTTATGAGAAAATAATGCT+GGG + chr8.1:76979875-76979894 None:intergenic 20.0%
!!! TTTTTATGAGAAAATAATGC+TGG + chr8.1:76979876-76979895 None:intergenic 20.0%
! AAAACACAAATCACAAACAA+TGG - chr8.1:76980500-76980519 MS.gene25007:CDS 25.0%
! AAAGTGTGTATCTCTTATTA+GGG - chr8.1:76981814-76981833 MS.gene25007:intron 25.0%
! ACACTGTCTTTGTAATTAAA+AGG + chr8.1:76980533-76980552 None:intergenic 25.0%
! ATACACACTTTCATATCATT+TGG + chr8.1:76981805-76981824 None:intergenic 25.0%
! ATACAGATATATGTGATGAA+GGG - chr8.1:76980818-76980837 MS.gene25007:intron 25.0%
! CAGGAACAATATATATTTAC+CGG + chr8.1:76981323-76981342 None:intergenic 25.0%
! TACTTTGCCAGAAATAAATA+TGG - chr8.1:76981025-76981044 MS.gene25007:CDS 25.0%
! TATATATTGTTCCTGATGTA+AGG - chr8.1:76981328-76981347 MS.gene25007:CDS 25.0%
! TTTATGAGAAAATAATGCTG+GGG + chr8.1:76979874-76979893 None:intergenic 25.0%
!! AAATTTTGCCAACAAAGTTT+TGG - chr8.1:76980936-76980955 MS.gene25007:CDS 25.0%
!! CAAAAGTTTCTTGATTTTCA+TGG + chr8.1:76980870-76980889 None:intergenic 25.0%
!! GAAAATCAAGAAACTTTTGA+AGG - chr8.1:76980871-76980890 MS.gene25007:intron 25.0%
!! TTTGGTATCATATTTGTTAG+AGG - chr8.1:76980452-76980471 MS.gene25007:CDS 25.0%
!!! GATGTTGTCATTTCTAAAAT+AGG + chr8.1:76981144-76981163 None:intergenic 25.0%
!!! GGTTTGTTTTGTTACAATAA+AGG - chr8.1:76980194-76980213 MS.gene25007:intron 25.0%
AAAAGACTAAAAGAGTGACT+TGG + chr8.1:76980605-76980624 None:intergenic 30.0%
AAAAGTCCGCTACAAAATTT+CGG + chr8.1:76980746-76980765 None:intergenic 30.0%
AAATTGTTGAAATCAACGCA+TGG - chr8.1:76982157-76982176 MS.gene25007:CDS 30.0%
AATGATTATTGACAGGGATT+TGG - chr8.1:76981217-76981236 MS.gene25007:intron 30.0%
AGGGGTAGCAATAATATTAT+TGG - chr8.1:76980072-76980091 MS.gene25007:CDS 30.0%
ATAAGTATGCAAAGAGTAAG+AGG - chr8.1:76979986-76980005 MS.gene25007:CDS 30.0%
CAAAGAGTAAGAGGTTTAAA+AGG - chr8.1:76979995-76980014 MS.gene25007:CDS 30.0%
CAGTTCAATGATTATTGACA+GGG - chr8.1:76981211-76981230 MS.gene25007:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG + chr8.1:76982030-76982049 None:intergenic 30.0%
GACAAAACATGAGTTTATTC+AGG - chr8.1:76980338-76980357 MS.gene25007:intron 30.0%
GATACAGATATATGTGATGA+AGG - chr8.1:76980817-76980836 MS.gene25007:intron 30.0%
GGGGTAGCAATAATATTATT+GGG - chr8.1:76980073-76980092 MS.gene25007:CDS 30.0%
GTCAGTTCAATGATTATTGA+CGG - chr8.1:76981666-76981685 MS.gene25007:intron 30.0%
TACAGATATATGTGATGAAG+GGG - chr8.1:76980819-76980838 MS.gene25007:intron 30.0%
TCAGTTCAATGATTATTGAC+AGG - chr8.1:76981210-76981229 MS.gene25007:intron 30.0%
TCAGTTCAATGATTATTGAC+GGG - chr8.1:76981210-76981229 MS.gene25007:intron 30.0%
TTCAACTGCAGATATATCTT+TGG - chr8.1:76982291-76982310 MS.gene25007:intron 30.0%
TTCAGAACAGCCAATAATAT+AGG + chr8.1:76980376-76980395 None:intergenic 30.0%
TTGGATGAAATGAAATGTCT+AGG - chr8.1:76981918-76981937 MS.gene25007:intron 30.0%
! AAGACTCTTGTTTACTATAG+TGG - chr8.1:76980102-76980121 MS.gene25007:CDS 30.0%
! AGTTTCTTGATTTTCATGGT+CGG + chr8.1:76980866-76980885 None:intergenic 30.0%
! GAAAGTGTGTATCTCTTATT+AGG - chr8.1:76981813-76981832 MS.gene25007:intron 30.0%
! GATTTTGCGTTTTCTTATAG+TGG + chr8.1:76982353-76982372 None:intergenic 30.0%
! GGACAACTAATAATGGTTTT+TGG - chr8.1:76980016-76980035 MS.gene25007:CDS 30.0%
! TATCATCCGAAATTTTGTAG+CGG - chr8.1:76980737-76980756 MS.gene25007:intron 30.0%
! TCTTCTACAATTTTACAGTG+TGG - chr8.1:76982070-76982089 MS.gene25007:CDS 30.0%
!! CTTTAAAGCCAAAACTTTGT+TGG + chr8.1:76980947-76980966 None:intergenic 30.0%
!!! CTTTGAACCCTTTTTTCTTT+TGG - chr8.1:76980434-76980453 MS.gene25007:intron 30.0%
!!! TTCATCTTTTTCAGCTTGTT+CGG - chr8.1:76979915-76979934 MS.gene25007:CDS 30.0%
AATGATTATTGACGGGGATT+TGG - chr8.1:76981674-76981693 MS.gene25007:intron 35.0%
ACAAACCTTGTCATCTTCAA+AGG + chr8.1:76980181-76980200 None:intergenic 35.0%
AGCTGAGAAAAAAGCTGAAA+AGG - chr8.1:76980789-76980808 MS.gene25007:intron 35.0%
AGGATCGAAAGATTAAGGTT+AGG - chr8.1:76980052-76980071 MS.gene25007:CDS 35.0%
ATGTATGCAAGTATGAACCT+TGG - chr8.1:76979814-76979833 MS.gene25007:CDS 35.0%
CAGTTCAATGATTATTGACG+GGG - chr8.1:76981668-76981687 MS.gene25007:intron 35.0%
GAACTTATCTTCCTCTTCAA+TGG + chr8.1:76981189-76981208 None:intergenic 35.0%
GACACAAGAAAAACCATTCT+GGG + chr8.1:76979957-76979976 None:intergenic 35.0%
GATCGAAAGATTAAGGTTAG+GGG - chr8.1:76980054-76980073 MS.gene25007:CDS 35.0%
GGATCGAAAGATTAAGGTTA+GGG - chr8.1:76980053-76980072 MS.gene25007:CDS 35.0%
TAAAATCAGATGACCCAGAA+TGG - chr8.1:76979941-76979960 MS.gene25007:CDS 35.0%
TACTTGCATACATCAACTTC+AGG + chr8.1:76979807-76979826 None:intergenic 35.0%
TCAGCATGTTTCATGTAGAA+AGG + chr8.1:76980976-76980995 None:intergenic 35.0%
TCCTCTTCAATGGTTTCAAA+TGG + chr8.1:76981179-76981198 None:intergenic 35.0%
TCGTTGAAAATGGTCTACTA+TGG - chr8.1:76981263-76981282 MS.gene25007:intron 35.0%
TGGAAAGGATCGAAAGATTA+AGG - chr8.1:76980047-76980066 MS.gene25007:CDS 35.0%
TGTATGCAAGTATGAACCTT+GGG - chr8.1:76979815-76979834 MS.gene25007:CDS 35.0%
TTGAAAATGGTCTACTATGG+AGG - chr8.1:76981266-76981285 MS.gene25007:intron 35.0%
TTGAAGGAATTCCTGATGTA+AGG - chr8.1:76980887-76980906 MS.gene25007:intron 35.0%
TTTCTTGAACATCCTAGTTC+AGG - chr8.1:76982118-76982137 MS.gene25007:CDS 35.0%
! AGTACCTTTCGAGATGATTT+TGG - chr8.1:76982244-76982263 MS.gene25007:CDS 35.0%
! CATTTTCAGAGATTGAAGGA+AGG + chr8.1:76981082-76981101 None:intergenic 35.0%
! CTAAAATAGGCATCGTGAAT+TGG + chr8.1:76981588-76981607 None:intergenic 35.0%
! GTACCTTTCGAGATGATTTT+GGG - chr8.1:76982245-76982264 MS.gene25007:CDS 35.0%
! TACCTTTCGAGATGATTTTG+GGG - chr8.1:76982246-76982265 MS.gene25007:CDS 35.0%
! TCCATTTGAAACCATTGAAG+AGG - chr8.1:76981175-76981194 MS.gene25007:CDS 35.0%
! TGCTCATTTTCAGAGATTGA+AGG + chr8.1:76981086-76981105 None:intergenic 35.0%
! TTCAATCTCTGAAAATGAGC+AGG - chr8.1:76981085-76981104 MS.gene25007:CDS 35.0%
!! AATGGTTTTTGGAAAGCTAC+TGG - chr8.1:76980027-76980046 MS.gene25007:CDS 35.0%
!! ACTAAAAGAGTGACTTGGTA+AGG + chr8.1:76980600-76980619 None:intergenic 35.0%
!! TTGCGTTTTCTTATAGTGGA+AGG + chr8.1:76982349-76982368 None:intergenic 35.0%
!! TTTTTGGAAAGCTACTGGAA+AGG - chr8.1:76980032-76980051 MS.gene25007:CDS 35.0%
!!! CGCATTAGTTTGTTTTGTCT+TGG - chr8.1:76980677-76980696 MS.gene25007:CDS 35.0%
AACCTTGTCATCTTCAAAGG+TGG + chr8.1:76980178-76980197 None:intergenic 40.0%
AAGGATGAACTCCTTACATC+AGG + chr8.1:76980901-76980920 None:intergenic 40.0%
ATCTGCAGTTGAATCACAAG+AGG + chr8.1:76982284-76982303 None:intergenic 40.0%
GGAATCAATATTTCAGGCAC+AGG - chr8.1:76981046-76981065 MS.gene25007:CDS 40.0%
GGACACAAGAAAAACCATTC+TGG + chr8.1:76979958-76979977 None:intergenic 40.0%
TATTAGGGAACCATCCATTG+CGG - chr8.1:76981829-76981848 MS.gene25007:intron 40.0%
TGTAAGGAGTTCCTGATGTA+AGG - chr8.1:76981344-76981363 MS.gene25007:CDS 40.0%
! ACCTTTCGAGATGATTTTGG+GGG - chr8.1:76982247-76982266 MS.gene25007:CDS 40.0%
! AGCTCTTTTCGACATGAAGA+TGG + chr8.1:76982395-76982414 None:intergenic 40.0%
! CACCAAGCATTGCTAAAATG+TGG + chr8.1:76981869-76981888 None:intergenic 40.0%
! CTAAAATAGGCATCGTGAAG+TGG + chr8.1:76981131-76981150 None:intergenic 40.0%
! GTAGACCATTTTCAACGACT+CGG + chr8.1:76981261-76981280 None:intergenic 40.0%
! TACCACCTTTGAAGATGACA+AGG - chr8.1:76980173-76980192 MS.gene25007:intron 40.0%
! TCGAAAAGAGCTGCTTTAAG+AGG - chr8.1:76982403-76982422 MS.gene25007:intron 40.0%
! TTTTTACCTGGTAACTCCCA+AGG + chr8.1:76979834-76979853 None:intergenic 40.0%
!! AGATGATTTTGGGGGATTAG+AGG - chr8.1:76982255-76982274 MS.gene25007:CDS 40.0%
!! GACCACATTTTAGCAATGCT+TGG - chr8.1:76981864-76981883 MS.gene25007:intron 40.0%
!!! ATCTTTTTCAGCTTGTTCGG+TGG - chr8.1:76979918-76979937 MS.gene25007:CDS 40.0%
CATCAGGAACTCCTTACATC+AGG + chr8.1:76981342-76981361 None:intergenic 45.0%
CATCGTGAATTGGCGAGTTT+GGG + chr8.1:76981578-76981597 None:intergenic 45.0%
CCAGTTCGAGTCGTTGAAAA+TGG - chr8.1:76981253-76981272 MS.gene25007:intron 45.0%
GATAGAAAACAGGTGCTTCC+AGG + chr8.1:76982190-76982209 None:intergenic 45.0%
TACTATAGTGGTCGTGTTCC+TGG - chr8.1:76980114-76980133 MS.gene25007:CDS 45.0%
TATGAACCTTGGGAGTTACC+AGG - chr8.1:76979825-76979844 MS.gene25007:CDS 45.0%
TCAAACTCATGTCACCGCAA+TGG + chr8.1:76981846-76981865 None:intergenic 45.0%
TCCCCCAAAATCATCTCGAA+AGG + chr8.1:76982251-76982270 None:intergenic 45.0%
TCGGAACTCATGTGTCTACT+TGG + chr8.1:76980847-76980866 None:intergenic 45.0%
! CCATTTTCAACGACTCGAAC+TGG + chr8.1:76981256-76981275 None:intergenic 45.0%
! CTTTTCGACATGAAGATGGC+TGG + chr8.1:76982391-76982410 None:intergenic 45.0%
! TCAACGCATGGTAATGTTCC+TGG - chr8.1:76982169-76982188 MS.gene25007:CDS 45.0%
! TCCTGGTGTTAAAAGCAGCT+GGG - chr8.1:76980131-76980150 MS.gene25007:intron 45.0%
! TTCCTGGTGTTAAAAGCAGC+TGG - chr8.1:76980130-76980149 MS.gene25007:intron 45.0%
ACTCATGTCACCGCAATGGA+TGG + chr8.1:76981842-76981861 None:intergenic 50.0%
CATCGTGAAGTGGCGAGTTT+GGG + chr8.1:76981121-76981140 None:intergenic 50.0%
CCAGTCCGAGTCGTTGAAAA+TGG - chr8.1:76981710-76981729 MS.gene25007:intron 50.0%
GCATCGTGAATTGGCGAGTT+TGG + chr8.1:76981579-76981598 None:intergenic 50.0%
GTGAATTGGCGAGTTTGGGA+TGG + chr8.1:76981574-76981593 None:intergenic 50.0%
TGCTGAAGTAGTCTCTACGC+CGG - chr8.1:76981301-76981320 MS.gene25007:intron 50.0%
! GCAGAGTATTCGCCTGAACT+AGG + chr8.1:76982133-76982152 None:intergenic 50.0%
!! CCATTTTCAACGACTCGGAC+TGG + chr8.1:76981713-76981732 None:intergenic 50.0%
!! GACATGAAGATGGCTGGTCT+TGG + chr8.1:76982385-76982404 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG + chr8.1:76982375-76982394 None:intergenic 50.0%
!!! ACCCAGCTGCTTTTAACACC+AGG + chr8.1:76980135-76980154 None:intergenic 50.0%
GCATCGTGAAGTGGCGAGTT+TGG + chr8.1:76981122-76981141 None:intergenic 55.0%
GTGAAGTGGCGAGTTTGGGA+TGG + chr8.1:76981117-76981136 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 76979796 76982432 76979796 ID=MS.gene25007
chr8.1 mRNA 76979796 76982432 76979796 ID=MS.gene25007.t1;Parent=MS.gene25007
chr8.1 exon 76982405 76982432 76982405 ID=MS.gene25007.t1.exon1;Parent=MS.gene25007.t1
chr8.1 CDS 76982405 76982432 76982405 ID=cds.MS.gene25007.t1;Parent=MS.gene25007.t1
chr8.1 exon 76982034 76982299 76982034 ID=MS.gene25007.t1.exon2;Parent=MS.gene25007.t1
chr8.1 CDS 76982034 76982299 76982034 ID=cds.MS.gene25007.t1;Parent=MS.gene25007.t1
chr8.1 exon 76981325 76981471 76981325 ID=MS.gene25007.t1.exon3;Parent=MS.gene25007.t1
chr8.1 CDS 76981325 76981471 76981325 ID=cds.MS.gene25007.t1;Parent=MS.gene25007.t1
chr8.1 exon 76980906 76981211 76980906 ID=MS.gene25007.t1.exon4;Parent=MS.gene25007.t1
chr8.1 CDS 76980906 76981211 76980906 ID=cds.MS.gene25007.t1;Parent=MS.gene25007.t1
chr8.1 exon 76980449 76980754 76980449 ID=MS.gene25007.t1.exon5;Parent=MS.gene25007.t1
chr8.1 CDS 76980449 76980754 76980449 ID=cds.MS.gene25007.t1;Parent=MS.gene25007.t1
chr8.1 exon 76979796 76980140 76979796 ID=MS.gene25007.t1.exon6;Parent=MS.gene25007.t1
chr8.1 CDS 76979796 76980140 76979796 ID=cds.MS.gene25007.t1;Parent=MS.gene25007.t1
Gene Sequence

>MS.gene25007

ATGTTATACCTGAAGTTGATGTATGCAAGTATGAACCTTGGGAGTTACCAGGTAAAAAAAAAACAAACAAACAAACCCCAGCATTATTTTCTCATAAAAATGCAACCTTTTTAATGTTTTTCATCTTTTTCAGCTTGTTCGGTGGTAAAATCAGATGACCCAGAATGGTTTTTCTTGTGTCCTATTGATTATAAGTATGCAAAGAGTAAGAGGTTTAAAAGGACAACTAATAATGGTTTTTGGAAAGCTACTGGAAAGGATCGAAAGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAGACTCTTGTTTACTATAGTGGTCGTGTTCCTGGTGTTAAAAGCAGCTGGGTGATTCATGAATATCATGATACCACCTTTGAAGATGACAAGGTTTGTTTTGTTACAATAAAGGTTTTAAATGAGTTTATTAGAGTTTTTATTTATTTATGAGAAATGAATATCATGAAAAATATTAACTTTTCATGTTTTACAAGTTTGTATCAGAGTTATTATTTATTTATTTAAATGAGTATGACAAAACATGAGTTTATTCAGGATTTACTATTTTCCTATATTATTGGCTGTTCTGAAATTTGATGTTTATTGAATTCATTGTTTGAAAGTTTGAACTTTGAACCCTTTTTTCTTTTGGTATCATATTTGTTAGAGGAACAACTAGTAATAGCAAATTAAAGAAAACACAAATCACAAACAATGGAATATGACCTTTTAATTACAAAGACAGTGTTTGAGATAAAGTTTTTTGTTGAAATGTTATTTTGCTGTATGACACCTTACCAAGTCACTCTTTTAGTCTTTTTCAGTTTTTGAATGTTAATATGACTGTTCAAGAAACTACTTTATGATTTTGACGCATTAGTTTGTTTTGTCTTGGTATCTATTTGTATAAATTGCATAAAATAAATGCTGATTATCATCCGAAATTTTGTAGCGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAAAGGAAGCTGATACAGATATATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGACCATGAAAATCAAGAAACTTTTGAAGGAATTCCTGATGTAAGGAGTTCATCCTTGATAAATGATAATAGAAATTTTGCCAACAAAGTTTTGGCTTTAAAGTTTAAACCTTTCTACATGAAACATGCTGAGAACTTATATTTGTTTTATAGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCACTTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCATCAGTTCAATGATTATTGACAGGGATTTGGACAACGCTCATGTCCAGTTCGAGTCGTTGAAAATGGTCTACTATGGAGGCAGTGACACAGATGCTGAAGTAGTCTCTACGCCGGTAAATATATATTGTTCCTGATGTAAGGAGTTCCTGATGTAAGGAGTTCATCCTTGATAAATGATAATAGAAATTTTGCCAACAAAGTTTTGGCTTTAAAGTTTAAACCTTTCTACATGAAACATGCTGAGAACTTATATTTGTTTTATAGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACACGCTGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCAATTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTACGCCGGTAAATATATATTGTTCAAAGACCAAATGATATGAAAGTGTGTATCTCTTATTAGGGAACCATCCATTGCGGTGACATGAGTTTGACCACATTTTAGCAATGCTTGGTGATTTTCTTTTATAAATTGTGAAAAAGTACTTGGATGAAATGAAATGTCTAGGTTGAGTTAGTTTTGATGCTTTTCTTTAATAGATTCAGAAGTTTTTTTTTTTCTTCTCTTTATACTGCATGTTGCTGTTATTCTCTTCCTTTTGAAATGCTACTAGAATGACCTTTCATAATGCTTATTTTCTTCTACAATTTTACAGTGTGGCGATATTCTTGATACTTCAATGACATTTCTTGAACATCCTAGTTCAGGCGAATACTCTGCATCAAAATTGTTGAAATCAACGCATGGTAATGTTCCTGGAAGCACCTGTTTTCTATCTTTAAAGAATGGTGAAATCGAAGACAACAACGAGAGTACCTTTCGAGATGATTTTGGGGGATTAGAGGCATCCTCTTGTGATTCAACTGCAGATATATCTTTGGAGACGATCAATTGTATTGAAATTTCTAGTTTACCTTCCACTATAAGAAAACGCAAAATCCAGTATCATCCAAGACCAGCCATCTTCATGTCGAAAAGAGCTGCTTTAAGAGGATCTTGA
Protein sequence

>MS.gene25007.t1

MLYLKLMYATCSVVKSDDPEWFFLCPIDYKYAKSKRFKRTTNNGFWKATGKDRKIKVRGSNNIIGIKKTLVYYSGRVPGVKSSWVIHEYHDTTFEDDKRTFVLCRLMKKAEKKAEKEADTDICDEGEPSRHMSSDHENQETFEGIPDVGDTLPEINMESIFQAQAEKYLPSISENEQEVSIPNSPLHDAYFRNDNIIVQSPFETIEEEDKFISSMIIDRDLDNAHVQFESLKMVYYGGSDTDAEVVSTPVGDTLPEINMESIFQAHAEKYLPSISENEQEVSIPNSPIHDAYFRNDNIIVQSPFETIEEEDKFVSSMIIDGDLDNAHVQSESLKMVYYGSSDTDAEVVSTPCGDILDTSMTFLEHPSSGEYSASKLLKSTHGNVPGSTCFLSLKNGEIEDNNESTFRDDFGGLEASSCDSTADISLETINCIEISSLPSTIRKRKIQYHPRPAIFMSKRAALRGS