Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25051.t1 | XP_003627434.1 | 98.3 | 769 | 13 | 0 | 1 | 769 | 1 | 769 | 0.00E+00 | 1512.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25051.t1 | Q6NQ79 | 60.8 | 762 | 271 | 9 | 4 | 758 | 2 | 742 | 3.6e-268 | 925.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25051.t1 | G7L956 | 98.3 | 769 | 13 | 0 | 1 | 769 | 1 | 769 | 0.0e+00 | 1512.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene25051.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25051.t1 | MTR_8g022980 | 98.309 | 769 | 13 | 0 | 1 | 769 | 1 | 769 | 0.0 | 1573 |
| MS.gene25051.t1 | MTR_8g022980 | 98.284 | 641 | 11 | 0 | 129 | 769 | 1 | 641 | 0.0 | 1317 |
| MS.gene25051.t1 | MTR_8g022980 | 98.601 | 572 | 8 | 0 | 198 | 769 | 1 | 572 | 0.0 | 1174 |
| MS.gene25051.t1 | MTR_2g044550 | 61.578 | 773 | 267 | 10 | 2 | 759 | 1 | 758 | 0.0 | 958 |
| MS.gene25051.t1 | MTR_8g038730 | 96.257 | 187 | 7 | 0 | 1 | 187 | 1 | 187 | 4.07e-126 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25051.t1 | AT3G43240 | 61.417 | 762 | 266 | 9 | 4 | 758 | 2 | 742 | 0.0 | 939 |
Find 188 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGAAAGTAAACAAAATT+TGG | 0.119113 | 8.4:+71701691 | None:intergenic |
| GCAGGGTCTTGGCGCATTTA+AGG | 0.202754 | 8.4:-71695318 | MS.gene25051:intron |
| TTCCCTGAGTTGGTTTCTTC+GGG | 0.216916 | 8.4:-71702867 | MS.gene25051:CDS |
| GCTTCCTCAATGGGCTTTGC+AGG | 0.239030 | 8.4:-71698612 | MS.gene25051:intron |
| CTCTGCCTAGCTGGAGTTAA+TGG | 0.257092 | 8.4:+71697478 | None:intergenic |
| CTTTCAAGGGGAGCAGTTAC+TGG | 0.263650 | 8.4:-71701677 | MS.gene25051:CDS |
| AGTGGACCTTCTGGTGTAAA+TGG | 0.273095 | 8.4:-71697394 | MS.gene25051:CDS |
| CTGCAAAACTTTCTCCATTT+GGG | 0.274228 | 8.4:+71701071 | None:intergenic |
| GAATCCCATATGTTGTGTTT+TGG | 0.280927 | 8.4:-71700873 | MS.gene25051:CDS |
| TGAGTCATTGCTGAGATCTT+TGG | 0.295961 | 8.4:-71699816 | MS.gene25051:CDS |
| TTTCCCTGAGTTGGTTTCTT+CGG | 0.299281 | 8.4:-71702868 | MS.gene25051:CDS |
| AAAATAATGCGTGACGAAAA+TGG | 0.300542 | 8.4:+71700821 | None:intergenic |
| AAGAGCTCTGATATCTCTTC+AGG | 0.306181 | 8.4:+71701607 | None:intergenic |
| TGCAGAGGCCCTTCATCTTA+AGG | 0.306525 | 8.4:-71701053 | MS.gene25051:intron |
| GAGCTAATTCATATTCTAAA+AGG | 0.310868 | 8.4:+71695679 | None:intergenic |
| TCTGCAAAACTTTCTCCATT+TGG | 0.312545 | 8.4:+71701070 | None:intergenic |
| CAATGATGCTGATAGCGATA+TGG | 0.314916 | 8.4:-71700297 | MS.gene25051:CDS |
| TGCCCCTCCACCACCGCTTC+AGG | 0.318880 | 8.4:-71699306 | MS.gene25051:CDS |
| CACTAAAAGGTGTCATTCTA+TGG | 0.325620 | 8.4:+71697413 | None:intergenic |
| GATTCACACCTCTTTCTTGT+AGG | 0.334905 | 8.4:+71697577 | None:intergenic |
| ACACCAGAAGGTCCACTAAA+AGG | 0.337433 | 8.4:+71697400 | None:intergenic |
| TCTTCATCATTGTGGATGTC+AGG | 0.348427 | 8.4:+71697538 | None:intergenic |
| AGGAAGTTGGTTCACTGGTT+TGG | 0.360399 | 8.4:-71701651 | MS.gene25051:CDS |
| CATATCTCACTTCTAGTATC+TGG | 0.366260 | 8.4:-71699221 | MS.gene25051:CDS |
| CCTTCTGGTGTAAATGGCTT+TGG | 0.390245 | 8.4:-71697388 | MS.gene25051:CDS |
| CTTGGCATTGCTAGTATTCA+AGG | 0.391786 | 8.4:-71697733 | MS.gene25051:CDS |
| ACAGTAGTGCTGCTGGGGAT+TGG | 0.392031 | 8.4:-71695391 | MS.gene25051:intron |
| GATATGGGGCCACACCTTCT+TGG | 0.399730 | 8.4:-71700281 | MS.gene25051:CDS |
| GAACTCGGCAAGCCCACCTT+GGG | 0.404076 | 8.4:+71696216 | None:intergenic |
| TCATCATGTATCTGAATAGA+AGG | 0.407728 | 8.4:+71700179 | None:intergenic |
| CAGTAGTGCTGCTGGGGATT+GGG | 0.410452 | 8.4:-71695390 | MS.gene25051:CDS |
| TCATGGAGTTTCTGATTCTC+CGG | 0.410638 | 8.4:-71696258 | MS.gene25051:CDS |
| CCATGTTTCTTCAACGGTAG+TGG | 0.411419 | 8.4:+71697238 | None:intergenic |
| TGGCGTCGAACATGAGGAAT+TGG | 0.411641 | 8.4:+71697433 | None:intergenic |
| CAAGTATCCTTTCCCTGAGT+TGG | 0.416051 | 8.4:-71702877 | MS.gene25051:CDS |
| TATCAAAGCTCTGATAAAGA+TGG | 0.426674 | 8.4:-71697658 | MS.gene25051:CDS |
| CACCTCTTTCTTGTAGGAGG+GGG | 0.429083 | 8.4:+71697583 | None:intergenic |
| ACGTTGGCAATGGCATCAAC+TGG | 0.431163 | 8.4:-71696032 | MS.gene25051:CDS |
| TAGCATGAAGCTTCCTCAAT+GGG | 0.431181 | 8.4:-71698621 | MS.gene25051:CDS |
| AACTCTTTGCAATCCGGAAA+AGG | 0.432695 | 8.4:-71701746 | MS.gene25051:CDS |
| CCAATACTACTACGCTTCAC+AGG | 0.433287 | 8.4:+71697331 | None:intergenic |
| TTTCCATTCAGAATGGCATC+AGG | 0.435615 | 8.4:+71696193 | None:intergenic |
| GCTGCCTGAAGCGGTGGTGG+AGG | 0.438692 | 8.4:+71699302 | None:intergenic |
| GGTTCAAACTCTTTGCAATC+CGG | 0.439687 | 8.4:-71701752 | MS.gene25051:CDS |
| AATGATGCTGATAGCGATAT+GGG | 0.440722 | 8.4:-71700296 | MS.gene25051:CDS |
| TATATAAGTTGTAGAGATCA+AGG | 0.442313 | 8.4:+71696167 | None:intergenic |
| TGTGACAGAAGGCAGGGTCT+TGG | 0.443860 | 8.4:-71695329 | MS.gene25051:CDS |
| CTGTTCAACAGTAGTGCTGC+TGG | 0.445981 | 8.4:-71695398 | MS.gene25051:intron |
| GGGAGGCTTCAGCCAAATGG+GGG | 0.448070 | 8.4:+71697603 | None:intergenic |
| TCATCTTCTTCATCCATCTC+TGG | 0.448210 | 8.4:+71700230 | None:intergenic |
| GGATGTCAGGGCTAGCCCCT+TGG | 0.453940 | 8.4:+71697551 | None:intergenic |
| ACCTCAGAGCAAGTCTGTAC+CGG | 0.455288 | 8.4:+71697202 | None:intergenic |
| CCACAATGATGAAGAGGAAA+AGG | 0.457336 | 8.4:-71697530 | MS.gene25051:CDS |
| ACCAAAATACCTTAAGATGA+AGG | 0.457949 | 8.4:+71701044 | None:intergenic |
| CATGGAGTTTCTGATTCTCC+GGG | 0.458678 | 8.4:-71696257 | MS.gene25051:CDS |
| AATGCTGCTTGCTGTGTCAC+AGG | 0.459679 | 8.4:-71695638 | MS.gene25051:intron |
| AGGATAGGACAATGGTGAAT+GGG | 0.468465 | 8.4:-71697510 | MS.gene25051:CDS |
| TCACACCTCTTTCTTGTAGG+AGG | 0.470346 | 8.4:+71697580 | None:intergenic |
| CCTGTGAAGCGTAGTAGTAT+TGG | 0.471268 | 8.4:-71697331 | MS.gene25051:CDS |
| GGGGAGGCTTCAGCCAAATG+GGG | 0.471904 | 8.4:+71697602 | None:intergenic |
| TTCCCTGATGCCATTCTGAA+TGG | 0.472931 | 8.4:-71696196 | MS.gene25051:CDS |
| TTCAATGAAATAACCTGCTT+AGG | 0.475210 | 8.4:+71697262 | None:intergenic |
| GGATGAGGAAGTTGGTTCAC+TGG | 0.477657 | 8.4:-71701656 | MS.gene25051:CDS |
| AGGTACCTGATCATTAAAAC+AGG | 0.479430 | 8.4:+71699187 | None:intergenic |
| CTTCGGCTGTGACAGAAGGC+AGG | 0.479531 | 8.4:-71695336 | MS.gene25051:CDS |
| CTCTGATATCTCTTCAGGGT+TGG | 0.486126 | 8.4:+71701612 | None:intergenic |
| AAGCTCATCTCAGCCTAAGC+AGG | 0.489092 | 8.4:-71697275 | MS.gene25051:CDS |
| ATGTTTCTTCTACAGGGAGT+TGG | 0.489899 | 8.4:-71695732 | MS.gene25051:intron |
| CTGCCTGAAGCGGTGGTGGA+GGG | 0.490738 | 8.4:+71699303 | None:intergenic |
| AAGGATAGGACAATGGTGAA+TGG | 0.491742 | 8.4:-71697511 | MS.gene25051:CDS |
| TCTGGTGTAAATGGCTTTGG+TGG | 0.494892 | 8.4:-71697385 | MS.gene25051:CDS |
| GGAACTCGGCAAGCCCACCT+TGG | 0.495235 | 8.4:+71696215 | None:intergenic |
| GCAAGCTCCATGGCAAGTAT+AGG | 0.496463 | 8.4:-71699459 | MS.gene25051:intron |
| CAGTTACTGGATGAGGAAGT+TGG | 0.497802 | 8.4:-71701664 | MS.gene25051:CDS |
| GGAGGCTTCAGCCAAATGGG+GGG | 0.500759 | 8.4:+71697604 | None:intergenic |
| GATAAAGATGGATGTGATAA+CGG | 0.502582 | 8.4:-71697646 | MS.gene25051:CDS |
| GGAATTTATTAAAGATGTCA+TGG | 0.506761 | 8.4:-71696275 | MS.gene25051:CDS |
| GGTTTCTTCGGGGCGTCTTG+AGG | 0.510131 | 8.4:-71702856 | MS.gene25051:intron |
| GAAGCTGCCTGAAGCGGTGG+TGG | 0.510387 | 8.4:+71699299 | None:intergenic |
| CACACCTCTTTCTTGTAGGA+GGG | 0.510592 | 8.4:+71697581 | None:intergenic |
| TTAGCATGAAGCTTCCTCAA+TGG | 0.514746 | 8.4:-71698622 | MS.gene25051:CDS |
| CCTTCTGTCACAGCCGAAGT+GGG | 0.515520 | 8.4:+71695340 | None:intergenic |
| TTCACTGGTTTGGCAAGGTG+TGG | 0.516514 | 8.4:-71701641 | MS.gene25051:CDS |
| GCTGGGGATTGGGTGAATTG+TGG | 0.518001 | 8.4:-71695380 | MS.gene25051:CDS |
| TGTTCAACAGTAGTGCTGCT+GGG | 0.519023 | 8.4:-71695397 | MS.gene25051:intron |
| TTGCTGAGATCTTTGGAGGA+TGG | 0.521508 | 8.4:-71699809 | MS.gene25051:CDS |
| AGGGGAGCAGTTACTGGATG+AGG | 0.522856 | 8.4:-71701671 | MS.gene25051:CDS |
| GTTGGTTCACTGGTTTGGCA+AGG | 0.524333 | 8.4:-71701646 | MS.gene25051:CDS |
| CAGAATGGCATCAGGGAACT+CGG | 0.525188 | 8.4:+71696201 | None:intergenic |
| TGCCTGAAGCGGTGGTGGAG+GGG | 0.526869 | 8.4:+71699304 | None:intergenic |
| TGGGTGAATTGTGGCATATG+TGG | 0.528030 | 8.4:-71695371 | MS.gene25051:CDS |
| GAATCAGTCGGCTATGCCCC+CGG | 0.528908 | 8.4:+71696239 | None:intergenic |
| GATGATGAAGAAAGTTCCTC+AGG | 0.530128 | 8.4:-71700209 | MS.gene25051:CDS |
| CTTCATCATTGTGGATGTCA+GGG | 0.531068 | 8.4:+71697539 | None:intergenic |
| GCAGGCAGCATATTGAGAAA+AGG | 0.532018 | 8.4:+71700843 | None:intergenic |
| GTTTACTTAGAAATCCCAAA+TGG | 0.532260 | 8.4:-71701085 | MS.gene25051:CDS |
| TCTTTCTCAAAAGAAGCTAC+AGG | 0.532796 | 8.4:+71697706 | None:intergenic |
| CAATGTTGACCCTCCAGAGA+TGG | 0.533538 | 8.4:-71700243 | MS.gene25051:CDS |
| CCAAAATACCTTAAGATGAA+GGG | 0.533560 | 8.4:+71701045 | None:intergenic |
| AAACTTCGATAAGAAACATC+AGG | 0.533627 | 8.4:+71697763 | None:intergenic |
| CTTTGGTGGTGCCCATGTTG+AGG | 0.535826 | 8.4:-71697371 | MS.gene25051:CDS |
| TCTCTACAACTTATATAAAG+AGG | 0.539055 | 8.4:-71696161 | MS.gene25051:intron |
| GGAGGATTTCACGTTGGCAA+TGG | 0.539913 | 8.4:-71696042 | MS.gene25051:CDS |
| CGCCCCGAAGAAACCAACTC+AGG | 0.541385 | 8.4:+71702864 | None:intergenic |
| AACACAATAAAGCTCGAAAG+AGG | 0.541887 | 8.4:+71700349 | None:intergenic |
| TATCGAAGTTTAGTTGCACT+TGG | 0.543468 | 8.4:-71697751 | MS.gene25051:CDS |
| CCCACTTCGGCTGTGACAGA+AGG | 0.550457 | 8.4:-71695340 | MS.gene25051:CDS |
| TCTTCTTCATCCATCTCTGG+AGG | 0.551868 | 8.4:+71700233 | None:intergenic |
| TGAGATATGTGCAGAACTGC+AGG | 0.552300 | 8.4:+71699235 | None:intergenic |
| GTTGCAAATGGGTATTCTCA+AGG | 0.557448 | 8.4:-71695124 | MS.gene25051:CDS |
| TCTTAGGTCGTTACAAGGGG+AGG | 0.558850 | 8.4:-71696060 | MS.gene25051:intron |
| ACACCTCTTTCTTGTAGGAG+GGG | 0.558864 | 8.4:+71697582 | None:intergenic |
| AACTTGAGATTTCTCATCTG+TGG | 0.561511 | 8.4:-71700149 | MS.gene25051:CDS |
| GCCTTCTGTCACAGCCGAAG+TGG | 0.563244 | 8.4:+71695339 | None:intergenic |
| GTCATTGCTGAGATCTTTGG+AGG | 0.563395 | 8.4:-71699813 | MS.gene25051:CDS |
| CAACATACCTATACTTGCCA+TGG | 0.567611 | 8.4:+71699452 | None:intergenic |
| TGGCAATGGCATCAACTGGA+AGG | 0.569612 | 8.4:-71696028 | MS.gene25051:CDS |
| CTACAGCCATGTTTCTTCAA+CGG | 0.571334 | 8.4:+71697232 | None:intergenic |
| ACATGGCTGTAGCAGAGGCC+CGG | 0.576956 | 8.4:-71697221 | MS.gene25051:CDS |
| TGACATCCACAATGATGAAG+AGG | 0.577598 | 8.4:-71697536 | MS.gene25051:CDS |
| TTGGCATTGCTAGTATTCAA+GGG | 0.579438 | 8.4:-71697732 | MS.gene25051:CDS |
| AGAGCTCTGATATCTCTTCA+GGG | 0.580730 | 8.4:+71701608 | None:intergenic |
| CCACTACCGTTGAAGAAACA+TGG | 0.580947 | 8.4:-71697238 | MS.gene25051:CDS |
| CCTCAGAGCAAGTCTGTACC+GGG | 0.582355 | 8.4:+71697203 | None:intergenic |
| AAGAAACATGGCTGTAGCAG+AGG | 0.582907 | 8.4:-71697226 | MS.gene25051:CDS |
| TTCAACAGAACGTGTTTCAG+AGG | 0.582910 | 8.4:+71702923 | None:intergenic |
| GAAGAAACCAACTCAGGGAA+AGG | 0.585243 | 8.4:+71702870 | None:intergenic |
| GCCGACTGATTCCCCAAGGT+GGG | 0.585564 | 8.4:-71696228 | MS.gene25051:CDS |
| TTGTGGCATATGTGGTGAGT+GGG | 0.586975 | 8.4:-71695363 | MS.gene25051:CDS |
| GTTCAACAGTAGTGCTGCTG+GGG | 0.589643 | 8.4:-71695396 | MS.gene25051:intron |
| CTTCTTCATCCATCTCTGGA+GGG | 0.590584 | 8.4:+71700234 | None:intergenic |
| ATTCTATGGCGTCGAACATG+AGG | 0.590589 | 8.4:+71697427 | None:intergenic |
| TTCGGCTGTGACAGAAGGCA+GGG | 0.591667 | 8.4:-71695335 | MS.gene25051:CDS |
| ATGATGAAGAGGAAAAGGAT+AGG | 0.591727 | 8.4:-71697525 | MS.gene25051:CDS |
| CCAAAGCCATTTACACCAGA+AGG | 0.591921 | 8.4:+71697388 | None:intergenic |
| TAATGCGTGACGAAAATGGC+AGG | 0.596504 | 8.4:+71700825 | None:intergenic |
| GTGGCACATAAGCCTCAACA+TGG | 0.597135 | 8.4:+71697359 | None:intergenic |
| ACATACAGCCGTCGGTAATG+TGG | 0.597154 | 8.4:+71701579 | None:intergenic |
| CTACGCTTCACAGGGACAAG+TGG | 0.597593 | 8.4:+71697340 | None:intergenic |
| ATGCGTAGTTGCAAGCTCCA+TGG | 0.599062 | 8.4:-71699469 | MS.gene25051:CDS |
| AAAGAAGCTGCCTGAAGCGG+TGG | 0.599822 | 8.4:+71699296 | None:intergenic |
| ATGTTGCAGTTTCAGCCACA+AGG | 0.599844 | 8.4:-71702981 | MS.gene25051:CDS |
| TAATTCATATTCTAAAAGGT+AGG | 0.599846 | 8.4:+71695683 | None:intergenic |
| GGCAATGGCATCAACTGGAA+GGG | 0.600155 | 8.4:-71696027 | MS.gene25051:CDS |
| CAGAAGCTTACAACAGTGGA+AGG | 0.600470 | 8.4:+71700122 | None:intergenic |
| TTCCATTCAGAATGGCATCA+GGG | 0.602855 | 8.4:+71696194 | None:intergenic |
| TCCCTGAGTTGGTTTCTTCG+GGG | 0.603052 | 8.4:-71702866 | MS.gene25051:CDS |
| AGATCTGCTTCAATAGCTTG+TGG | 0.605138 | 8.4:-71698662 | MS.gene25051:CDS |
| AAAACCTGCAAAGCCCATTG+AGG | 0.606920 | 8.4:+71698608 | None:intergenic |
| CAATACTACTACGCTTCACA+GGG | 0.609711 | 8.4:+71697332 | None:intergenic |
| AGAGGTGTGAATCAAGCCAA+GGG | 0.613158 | 8.4:-71697567 | MS.gene25051:CDS |
| GGTTGATATATCACATCGCA+TGG | 0.613948 | 8.4:+71699256 | None:intergenic |
| TTGCAAATGGGTATTCTCAA+GGG | 0.613998 | 8.4:-71695123 | MS.gene25051:CDS |
| GTCTGTTTAGAAGCTCCTTG+TGG | 0.615021 | 8.4:+71702966 | None:intergenic |
| TGATCATTAAAACAGGCTTG+TGG | 0.616696 | 8.4:+71699194 | None:intergenic |
| GCCCCGAAGAAACCAACTCA+GGG | 0.619432 | 8.4:+71702865 | None:intergenic |
| AAGAGGTGTGAATCAAGCCA+AGG | 0.621579 | 8.4:-71697568 | MS.gene25051:CDS |
| AGCCGACTGATTCCCCAAGG+TGG | 0.622396 | 8.4:-71696229 | MS.gene25051:CDS |
| TGAATTAGCTCATGATGATG+TGG | 0.628032 | 8.4:-71695667 | MS.gene25051:CDS |
| GCCCACCTTGGGGAATCAGT+CGG | 0.628960 | 8.4:+71696227 | None:intergenic |
| TTAGCTCATGATGATGTGGA+TGG | 0.631481 | 8.4:-71695663 | MS.gene25051:CDS |
| ATTGTGGCATATGTGGTGAG+TGG | 0.631500 | 8.4:-71695364 | MS.gene25051:CDS |
| ACAAGGGGAGGATTTCACGT+TGG | 0.631639 | 8.4:-71696048 | MS.gene25051:CDS |
| TCAGCATCATTGCTATCAGT+AGG | 0.634321 | 8.4:+71700308 | None:intergenic |
| TGTGGTGAGTGGGCCCACTT+CGG | 0.634797 | 8.4:-71695353 | MS.gene25051:CDS |
| GCAGTTCATCTACACACACA+TGG | 0.635510 | 8.4:-71700394 | MS.gene25051:intron |
| AGAGGAAAAGGATAGGACAA+TGG | 0.635674 | 8.4:-71697518 | MS.gene25051:CDS |
| CGAAAGAGGCACGTGCAAGG+TGG | 0.638835 | 8.4:+71700363 | None:intergenic |
| TTCAGAATACATACAGCCGT+CGG | 0.639840 | 8.4:+71701571 | None:intergenic |
| GCTCGAAAGAGGCACGTGCA+AGG | 0.639878 | 8.4:+71700360 | None:intergenic |
| ATGGAGTTTCTGATTCTCCG+GGG | 0.643557 | 8.4:-71696256 | MS.gene25051:CDS |
| ATAGTTCATGCACAACTCAA+CGG | 0.648715 | 8.4:-71698719 | MS.gene25051:CDS |
| AGACACTCACCAAGAAGGTG+TGG | 0.649077 | 8.4:+71700272 | None:intergenic |
| TGGAGTTTCTGATTCTCCGG+GGG | 0.651219 | 8.4:-71696255 | MS.gene25051:CDS |
| GCACACCATTAACTCCAGCT+AGG | 0.652707 | 8.4:-71697483 | MS.gene25051:CDS |
| GATTAAAAGTATCAGCAATG+AGG | 0.652782 | 8.4:-71697456 | MS.gene25051:CDS |
| CCCGGTACAGACTTGCTCTG+AGG | 0.653574 | 8.4:-71697203 | MS.gene25051:intron |
| CATAGCCGACTGATTCCCCA+AGG | 0.655094 | 8.4:-71696232 | MS.gene25051:CDS |
| TCCACAGAAGCTTACAACAG+TGG | 0.659825 | 8.4:+71700118 | None:intergenic |
| ATGATGCTGATAGCGATATG+GGG | 0.667822 | 8.4:-71700295 | MS.gene25051:CDS |
| CTTCGATACCACATTACCGA+CGG | 0.677069 | 8.4:-71701587 | MS.gene25051:CDS |
| AACTCGGCAAGCCCACCTTG+GGG | 0.678033 | 8.4:+71696217 | None:intergenic |
| AATAGAAGGAAGACTGCCTG+AGG | 0.683184 | 8.4:+71700193 | None:intergenic |
| CAGTTCATCTACACACACAT+GGG | 0.683334 | 8.4:-71700393 | MS.gene25051:CDS |
| GCTATTGAAGCAGATCTGCG+AGG | 0.710579 | 8.4:+71698668 | None:intergenic |
| TGGCACATAAGCCTCAACAT+GGG | 0.713146 | 8.4:+71697360 | None:intergenic |
| AAATTCGTAACACTACAATG+AGG | 0.721351 | 8.4:+71695163 | None:intergenic |
| GAGGTGTGAATCAAGCCAAG+GGG | 0.748167 | 8.4:-71697566 | MS.gene25051:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 71695099 | 71703003 | 71695099 | ID=MS.gene25051 |
| chr8.4 | mRNA | 71695099 | 71703003 | 71695099 | ID=MS.gene25051.t1;Parent=MS.gene25051 |
| chr8.4 | exon | 71702857 | 71703003 | 71702857 | ID=MS.gene25051.t1.exon1;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71702857 | 71703003 | 71702857 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71701585 | 71701773 | 71701585 | ID=MS.gene25051.t1.exon2;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71701585 | 71701773 | 71701585 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71701054 | 71701107 | 71701054 | ID=MS.gene25051.t1.exon3;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71701054 | 71701107 | 71701054 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71700808 | 71700896 | 71700808 | ID=MS.gene25051.t1.exon4;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71700808 | 71700896 | 71700808 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71700133 | 71700412 | 71700133 | ID=MS.gene25051.t1.exon5;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71700133 | 71700412 | 71700133 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71699784 | 71699840 | 71699784 | ID=MS.gene25051.t1.exon6;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71699784 | 71699840 | 71699784 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71699460 | 71699491 | 71699460 | ID=MS.gene25051.t1.exon7;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71699460 | 71699491 | 71699460 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71699193 | 71699328 | 71699193 | ID=MS.gene25051.t1.exon8;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71699193 | 71699328 | 71699193 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71698613 | 71698786 | 71698613 | ID=MS.gene25051.t1.exon9;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71698613 | 71698786 | 71698613 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71697204 | 71697803 | 71697204 | ID=MS.gene25051.t1.exon10;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71697204 | 71697803 | 71697204 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71696162 | 71696299 | 71696162 | ID=MS.gene25051.t1.exon11;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71696162 | 71696299 | 71696162 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71695978 | 71696076 | 71695978 | ID=MS.gene25051.t1.exon12;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71695978 | 71696076 | 71695978 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71695639 | 71695739 | 71695639 | ID=MS.gene25051.t1.exon13;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71695639 | 71695739 | 71695639 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71695319 | 71695409 | 71695319 | ID=MS.gene25051.t1.exon14;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71695319 | 71695409 | 71695319 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| chr8.4 | exon | 71695099 | 71695221 | 71695099 | ID=MS.gene25051.t1.exon15;Parent=MS.gene25051.t1 |
| chr8.4 | CDS | 71695099 | 71695221 | 71695099 | ID=cds.MS.gene25051.t1;Parent=MS.gene25051.t1 |
| Gene Sequence |
| Protein sequence |
