AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25294

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25294.t1 MTR_8g062240 96.140 285 4 2 1 285 1 278 0.0 551
MS.gene25294.t1 MTR_5g037250 69.585 217 46 6 75 285 37 239 2.55e-95 281
MS.gene25294.t1 MTR_7g053410 53.171 205 74 6 84 276 234 428 7.78e-52 177
MS.gene25294.t1 MTR_7g053410 53.171 205 74 6 84 276 234 428 1.05e-51 177
MS.gene25294.t1 MTR_8g012290 63.309 139 40 3 109 239 237 372 1.03e-50 174
MS.gene25294.t1 MTR_8g012290 63.309 139 40 3 109 239 237 372 1.06e-50 174
MS.gene25294.t1 MTR_5g048860 71.930 114 30 1 134 247 343 454 3.06e-47 166
MS.gene25294.t1 MTR_8g065740 69.298 114 33 1 134 247 283 394 2.67e-46 162
MS.gene25294.t1 MTR_1g017350 39.865 296 125 8 5 257 74 359 4.66e-46 160
MS.gene25294.t1 MTR_1g017350 39.865 296 125 8 5 257 74 359 7.05e-46 160
MS.gene25294.t1 MTR_1g017350 40.426 282 115 8 5 243 74 345 1.55e-45 159
MS.gene25294.t1 MTR_1g017350 40.426 282 115 8 5 243 74 345 1.73e-45 159
MS.gene25294.t1 MTR_4g070320 55.484 155 53 2 110 251 85 236 5.81e-45 155
MS.gene25294.t1 MTR_3g116770 60.417 144 44 4 123 254 150 292 7.40e-45 156
MS.gene25294.t1 MTR_3g116770 60.417 144 44 4 123 254 150 292 8.05e-45 156
MS.gene25294.t1 MTR_8g099880 88.000 75 9 0 155 229 142 216 4.62e-40 142
MS.gene25294.t1 MTR_3g498825 82.716 81 14 0 149 229 138 218 1.09e-39 141
MS.gene25294.t1 MTR_7g092510 72.093 86 24 0 152 237 167 252 1.91e-37 135
MS.gene25294.t1 MTR_1g059270 66.667 90 30 0 155 244 157 246 2.92e-37 132
MS.gene25294.t1 MTR_1g059270 69.412 85 26 0 155 239 157 241 5.68e-36 131
MS.gene25294.t1 MTR_6g084120 44.604 139 51 4 100 238 114 226 1.01e-24 100
MS.gene25294.t1 MTR_4g131160 59.756 82 32 1 142 223 180 260 3.81e-22 95.5
MS.gene25294.t1 MTR_4g131160 59.756 82 32 1 142 223 183 263 3.99e-22 95.5
MS.gene25294.t1 MTR_1g080890 58.974 78 26 2 146 223 186 257 8.64e-20 88.2
MS.gene25294.t1 MTR_4g107320 57.692 78 25 4 176 245 60 137 5.98e-17 76.3
MS.gene25294.t1 MTR_2g098310 38.356 146 73 5 88 222 257 396 1.16e-15 76.6
MS.gene25294.t1 MTR_1g069155 47.561 82 41 2 160 241 319 398 4.04e-15 75.5
MS.gene25294.t1 MTR_1g084980 50.000 64 31 1 160 223 464 526 5.53e-15 75.5
MS.gene25294.t1 MTR_2g098310 38.621 145 72 5 88 221 257 395 8.94e-15 74.3
MS.gene25294.t1 MTR_4g065870 55.385 65 29 0 158 222 355 419 1.92e-14 73.2
MS.gene25294.t1 MTR_4g065870 54.839 62 28 0 158 219 355 416 1.26e-13 70.9
MS.gene25294.t1 MTR_1g052470 48.101 79 36 1 146 224 291 364 1.74e-13 70.5
MS.gene25294.t1 MTR_7g099540 50.000 64 31 1 160 223 254 316 3.43e-13 69.7
MS.gene25294.t1 MTR_4g033295 49.231 65 33 0 158 222 118 182 4.25e-13 67.0
MS.gene25294.t1 MTR_7g092540 44.595 74 41 0 158 231 243 316 5.88e-13 68.2
MS.gene25294.t1 MTR_1g070870 60.606 66 25 1 158 223 120 184 6.14e-13 67.8
MS.gene25294.t1 MTR_1g070870 60.606 66 25 1 158 223 123 187 6.88e-13 67.8
MS.gene25294.t1 MTR_4g033295 47.761 67 34 1 158 223 118 184 7.89e-13 65.9
MS.gene25294.t1 MTR_7g092540 48.438 64 33 0 158 221 243 306 1.46e-12 67.0
MS.gene25294.t1 MTR_1g018090 49.231 65 32 1 158 222 274 337 2.38e-12 67.0
MS.gene25294.t1 MTR_1g019240 36.364 110 50 4 115 224 61 150 4.63e-12 65.1
MS.gene25294.t1 MTR_3g103030 35.659 129 69 3 107 222 165 292 6.28e-12 65.5
MS.gene25294.t1 MTR_8g036235 47.692 65 34 0 158 222 316 380 1.00e-11 65.1
MS.gene25294.t1 MTR_5g005110 50.000 64 31 1 159 222 225 287 1.28e-11 64.3
MS.gene25294.t1 MTR_7g099540 46.875 64 33 1 160 223 254 316 1.69e-11 64.7
MS.gene25294.t1 MTR_7g111320 48.438 64 32 1 160 223 434 496 2.26e-11 64.3
MS.gene25294.t1 MTR_3g449770 46.875 64 33 1 160 223 311 373 3.16e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25294.t1 AT1G59640 58.020 293 86 11 1 285 1 264 7.36e-96 283
MS.gene25294.t1 AT1G59640 57.600 250 70 11 1 243 1 221 1.09e-74 232
MS.gene25294.t1 AT5G62610 51.525 295 119 12 1 285 1 281 6.86e-71 220
MS.gene25294.t1 AT5G62610 51.525 295 119 12 1 285 1 281 6.86e-71 220
MS.gene25294.t1 AT3G07340 57.500 160 46 3 84 243 206 343 1.14e-47 165
MS.gene25294.t1 AT3G07340 57.500 160 46 3 84 243 206 343 2.17e-47 164
MS.gene25294.t1 AT1G26260 55.696 158 64 2 92 248 110 262 5.64e-46 158
MS.gene25294.t1 AT5G48560 77.451 102 19 3 143 243 289 387 7.16e-46 160
MS.gene25294.t1 AT5G48560 77.451 102 19 3 143 243 289 387 1.20e-45 160
MS.gene25294.t1 AT1G26260 55.696 158 64 2 92 248 139 291 1.21e-45 158
MS.gene25294.t1 AT1G26260 55.696 158 64 2 92 248 161 313 2.21e-45 157
MS.gene25294.t1 AT1G26260 55.696 158 64 2 92 248 161 313 2.21e-45 157
MS.gene25294.t1 AT1G26260 55.696 158 64 2 92 248 161 313 2.21e-45 157
MS.gene25294.t1 AT1G26260 55.696 158 64 2 92 248 161 313 2.21e-45 157
MS.gene25294.t1 AT1G68920 75.758 99 24 0 148 246 292 390 6.11e-45 158
MS.gene25294.t1 AT1G68920 75.758 99 24 0 148 246 293 391 6.21e-45 158
MS.gene25294.t1 AT1G68920 75.758 99 24 0 148 246 293 391 6.21e-45 158
MS.gene25294.t1 AT1G68920 75.758 99 24 0 148 246 293 391 6.21e-45 158
MS.gene25294.t1 AT5G50915 56.115 139 49 3 93 229 79 207 8.13e-44 150
MS.gene25294.t1 AT5G50915 56.115 139 49 3 93 229 79 207 8.13e-44 150
MS.gene25294.t1 AT3G23690 61.029 136 42 3 97 232 141 265 1.41e-43 152
MS.gene25294.t1 AT5G50915 56.522 138 48 3 93 228 79 206 1.86e-43 150
MS.gene25294.t1 AT5G50915 56.522 138 48 3 93 228 79 206 1.86e-43 150
MS.gene25294.t1 AT1G10120 70.833 96 28 0 151 246 199 294 2.68e-42 149
MS.gene25294.t1 AT1G10120 70.833 96 28 0 151 246 199 294 2.68e-42 149
MS.gene25294.t1 AT4G36540 52.740 146 67 1 101 244 82 227 7.89e-42 146
MS.gene25294.t1 AT4G36540 53.472 144 65 1 101 242 82 225 2.50e-41 145
MS.gene25294.t1 AT2G18300 70.103 97 29 0 148 244 175 271 7.63e-41 144
MS.gene25294.t1 AT4G34530 82.500 80 14 0 152 231 166 245 1.43e-40 144
MS.gene25294.t1 AT2G18300 70.103 97 29 0 148 244 175 271 1.56e-40 144
MS.gene25294.t1 AT2G18300 71.579 95 27 0 148 242 175 269 2.17e-40 143
MS.gene25294.t1 AT2G42300 69.318 88 27 0 152 239 179 266 2.67e-38 136
MS.gene25294.t1 AT3G57800 71.591 88 25 0 152 239 198 285 8.69e-38 137
MS.gene25294.t1 AT2G42300 65.957 94 32 0 152 245 179 272 1.34e-37 135
MS.gene25294.t1 AT1G25330 48.507 134 60 2 115 246 66 192 4.03e-34 124
MS.gene25294.t1 AT1G18400 74.667 75 19 0 156 230 143 217 8.13e-34 124
MS.gene25294.t1 AT1G18400 74.667 75 19 0 156 230 143 217 1.52e-33 123
MS.gene25294.t1 AT1G73830 69.512 82 25 0 157 238 146 227 2.55e-33 122
MS.gene25294.t1 AT1G73830 69.512 82 25 0 157 238 146 227 2.71e-33 122
MS.gene25294.t1 AT3G57800 46.667 135 25 1 152 239 198 332 5.85e-29 114
MS.gene25294.t1 AT2G24260 63.014 73 26 1 151 223 28 99 1.63e-22 94.0
MS.gene25294.t1 AT2G24260 63.014 73 26 1 151 223 131 202 1.24e-21 93.6
MS.gene25294.t1 AT4G30980 68.182 66 20 1 158 223 130 194 5.72e-21 90.9
MS.gene25294.t1 AT5G58010 61.842 76 28 1 148 223 89 163 7.27e-21 90.5
MS.gene25294.t1 AT4G30980 68.182 66 20 1 158 223 178 242 7.30e-21 91.3
MS.gene25294.t1 AT2G42300 78.723 47 10 0 152 198 179 225 2.69e-19 84.7
MS.gene25294.t1 AT2G42300 78.723 47 10 0 152 198 179 225 2.69e-19 84.7
MS.gene25294.t1 AT2G42300 80.435 46 9 0 152 197 179 224 3.53e-19 84.7
MS.gene25294.t1 AT4G02590 49.515 103 46 3 126 223 46 147 1.23e-15 75.1
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 121 271 1.93e-15 76.3
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 121 271 1.93e-15 76.3
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 121 271 1.93e-15 76.3
MS.gene25294.t1 AT4G02590 49.515 103 46 3 126 223 109 210 2.14e-15 75.5
MS.gene25294.t1 AT4G02590 49.515 103 46 3 126 223 109 210 2.14e-15 75.5
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 192 342 3.16e-15 75.9
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 192 342 3.16e-15 75.9
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 192 342 3.16e-15 75.9
MS.gene25294.t1 AT2G20180 32.317 164 97 5 61 223 192 342 3.16e-15 75.9
MS.gene25294.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.88e-15 74.7
MS.gene25294.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.88e-15 74.7
MS.gene25294.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.88e-15 74.7
MS.gene25294.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.88e-15 74.7
MS.gene25294.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.88e-15 74.7
MS.gene25294.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.88e-15 74.7
MS.gene25294.t1 AT1G03040 48.544 103 47 3 126 223 107 208 2.18e-14 72.4
MS.gene25294.t1 AT1G03040 48.544 103 47 3 126 223 107 208 2.29e-14 72.8
MS.gene25294.t1 AT4G28800 44.000 75 41 1 161 235 252 325 1.44e-13 70.9
MS.gene25294.t1 AT1G03040 54.217 83 35 2 143 223 122 203 2.25e-13 69.3
MS.gene25294.t1 AT2G20180 31.677 161 96 5 61 220 192 339 2.93e-13 69.3
MS.gene25294.t1 AT2G42280 50.000 64 32 0 158 221 279 342 4.08e-13 69.3
MS.gene25294.t1 AT1G51140 53.125 64 30 0 158 221 304 367 4.10e-13 69.3
MS.gene25294.t1 AT4G28815 51.724 58 27 1 161 218 71 127 4.62e-13 67.8
MS.gene25294.t1 AT4G09180 46.269 67 36 0 156 222 182 248 7.24e-13 67.4
MS.gene25294.t1 AT2G42280 51.515 66 30 1 158 221 279 344 8.21e-13 68.2
MS.gene25294.t1 AT4G28800 45.833 72 37 2 161 231 264 334 1.05e-12 68.2
MS.gene25294.t1 AT4G28790 35.200 125 61 5 160 280 273 381 1.54e-12 67.8
MS.gene25294.t1 AT4G28815 51.724 58 27 1 161 218 147 203 1.54e-12 67.0
MS.gene25294.t1 AT2G46970 43.836 73 35 2 156 223 216 287 2.18e-12 67.4
MS.gene25294.t1 AT2G46970 43.836 73 35 2 156 223 185 256 2.40e-12 67.0
MS.gene25294.t1 AT2G46970 43.836 73 35 2 156 223 194 265 2.63e-12 67.0
MS.gene25294.t1 AT4G33880 42.857 84 45 2 141 222 247 329 4.01e-12 66.2
MS.gene25294.t1 AT1G35460 46.154 65 35 0 158 222 181 245 5.12e-12 65.1
MS.gene25294.t1 AT4G00050 47.692 65 33 1 158 222 105 168 1.27e-11 64.3
MS.gene25294.t1 AT1G27740 49.231 65 32 1 158 222 167 230 2.00e-11 63.2
MS.gene25294.t1 AT2G14760 49.231 65 32 1 158 222 237 300 2.05e-11 63.9
MS.gene25294.t1 AT4G00050 47.692 65 33 1 158 222 207 270 2.17e-11 64.3
MS.gene25294.t1 AT4G00050 47.692 65 33 1 158 222 207 270 2.60e-11 63.9
MS.gene25294.t1 AT4G36930 47.541 61 31 1 164 224 197 256 8.17e-11 62.4

Find 95 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTCAATTTAGGTTAT+TGG 0.179282 8.2:+38366731 MS.gene25294:intron
TGTTTAACACTTACATCTTT+TGG 0.232272 8.2:-38366986 None:intergenic
TTTCTTCAATTTAGGTTATT+GGG 0.258352 8.2:+38366732 MS.gene25294:intron
CAGTTTCCAGCGGCGATTAA+TGG 0.284846 8.2:+38364962 MS.gene25294:CDS
TTTAGTTCCTGGTTGTAATA+AGG 0.288451 8.2:+38366491 MS.gene25294:CDS
CCGCAGTTTGGGAACGGTTT+AGG 0.291510 8.2:+38365013 MS.gene25294:CDS
GACTAAGAAGGCCGCAGTTT+GGG 0.332351 8.2:+38365002 MS.gene25294:CDS
ATTCTACAGGATTTAGTTCC+TGG 0.338943 8.2:+38366480 MS.gene25294:CDS
TTAGGACAGTTTGGTGAGTT+TGG 0.345423 8.2:+38365031 MS.gene25294:CDS
CGTTTAGTTTAGCGGAGATC+TGG 0.375505 8.2:+38364939 MS.gene25294:CDS
CAACAAACGTTTGATCTTGC+CGG 0.377074 8.2:+38367555 MS.gene25294:CDS
AATGGCGGCGGAGGTGGATT+GGG 0.382699 8.2:+38364980 MS.gene25294:CDS
ATTACCATCCCGGTTTAAAC+CGG 0.385440 8.2:-38365056 None:intergenic
ACCTGCATATGTAACCATTC+TGG 0.392490 8.2:-38367627 None:intergenic
CCCTCGTTCATCATCGCTCC+TGG 0.400423 8.2:-38364884 None:intergenic
ACATCCATGTTCGAGCTAGA+AGG 0.403285 8.2:+38366065 MS.gene25294:CDS
TGGACAATAAACAGGCTAGA+AGG 0.405648 8.2:+38366433 MS.gene25294:intron
CAGATCTCCGCTAAACTAAA+CGG 0.416576 8.2:-38364938 None:intergenic
GTTGAAGGAGAAGTCAGTTC+AGG 0.418689 8.2:+38365986 MS.gene25294:CDS
TAATGGCGGCGGAGGTGGAT+TGG 0.422484 8.2:+38364979 MS.gene25294:CDS
TTACGCGTTCTGCAAGACTA+TGG 0.424378 8.2:-38366105 None:intergenic
GCGATTAATGGCGGCGGAGG+TGG 0.426598 8.2:+38364974 MS.gene25294:CDS
AGTTTGGACCCGGTTTAAAC+CGG 0.426792 8.2:+38365047 MS.gene25294:CDS
GGACTAAGAAGGCCGCAGTT+TGG 0.434537 8.2:+38365001 MS.gene25294:CDS
CAGTTTGGTGAGTTTGGACC+CGG 0.446797 8.2:+38365037 MS.gene25294:CDS
GGAAAACGGACTAAAGCATC+AGG 0.450766 8.2:+38365935 MS.gene25294:CDS
CTTGTAGCTTGTGAAACAAA+TGG 0.451137 8.2:-38367582 None:intergenic
GGTTTAAACCGGGATGGTAA+TGG 0.452515 8.2:+38365058 MS.gene25294:CDS
TACGACGCCGTTTAGTTTAG+CGG 0.455033 8.2:+38364931 MS.gene25294:CDS
TGAAAGGATGAAAATTCTAC+AGG 0.461627 8.2:+38366467 MS.gene25294:CDS
TAGTGAACCGAAATGGATCC+AGG 0.464407 8.2:+38364866 None:intergenic
GTCGTATTTCCATTCCCATT+CGG 0.470342 8.2:-38364914 None:intergenic
CATCCATGTTCGAGCTAGAA+GGG 0.474849 8.2:+38366066 MS.gene25294:CDS
GGTTCATTTCCGAATGGGAA+TGG 0.479304 8.2:+38364905 MS.gene25294:CDS
GGGAACGGTTTAGGACAGTT+TGG 0.481836 8.2:+38365022 MS.gene25294:CDS
ACCAGAATGGTTACATATGC+AGG 0.483200 8.2:+38367626 MS.gene25294:CDS
AACCATGGTGGTGTTGGTGG+TGG 0.493213 8.2:+38365103 MS.gene25294:CDS
ACATGGATGTAATCTTGCTT+AGG 0.502301 8.2:-38366052 None:intergenic
ACGAGGGTTCATTTCCGAAT+GGG 0.502721 8.2:+38364900 MS.gene25294:CDS
AACAAGAATGAGGGTGGTGA+TGG 0.502949 8.2:+38365959 MS.gene25294:CDS
CCGCCGCCATTAATCGCCGC+TGG 0.503828 8.2:-38364968 None:intergenic
TTGAACCATGGTGGTGTTGG+TGG 0.507286 8.2:+38365100 MS.gene25294:CDS
GCGGCGATTAATGGCGGCGG+AGG 0.511591 8.2:+38364971 MS.gene25294:CDS
GCAGAGGTTCTTCACCAGAA+TGG 0.515410 8.2:+38367613 MS.gene25294:CDS
TGGATGTAATCTTGCTTAGG+AGG 0.520256 8.2:-38366049 None:intergenic
TGGAGGAAAGGCTTCAATGC+CGG 0.520377 8.2:-38366966 None:intergenic
ACTCCGGTCCATTACCATCC+CGG 0.528802 8.2:-38365066 None:intergenic
TTAGGTTATTGGGAAAGCAT+TGG 0.529281 8.2:+38366742 MS.gene25294:intron
GTTTGGACCCGGTTTAAACC+GGG 0.537559 8.2:+38365048 MS.gene25294:CDS
TCTGGTGAAGAACCTCTGCT+TGG 0.539168 8.2:-38367609 None:intergenic
AATAATGAATACCACGGCAT+TGG 0.540706 8.2:-38365188 None:intergenic
GGACAATAAACAGGCTAGAA+GGG 0.544423 8.2:+38366434 MS.gene25294:intron
TTACCATCCCGGTTTAAACC+GGG 0.553757 8.2:-38365055 None:intergenic
CCAGCGGCGATTAATGGCGG+CGG 0.557594 8.2:+38364968 MS.gene25294:CDS
TTACATATGCAGGTAGGTGG+TGG 0.558363 8.2:+38367636 MS.gene25294:CDS
AGAAGGCCGCAGTTTGGGAA+CGG 0.559428 8.2:+38365007 MS.gene25294:CDS
AGCATCAGGGAACAAGAATG+AGG 0.561192 8.2:+38365949 MS.gene25294:CDS
AGAATGATAGTGATGGAAAA+CGG 0.563521 8.2:+38365921 MS.gene25294:intron
AACGAGGGTTCATTTCCGAA+TGG 0.564078 8.2:+38364899 MS.gene25294:CDS
TTGTGAAACAAATGGCATGC+CGG 0.566973 8.2:-38367574 None:intergenic
GACCCCTTCTAGCTCGAACA+TGG 0.574237 8.2:-38366069 None:intergenic
AAACCGGGATGGTAATGGAC+CGG 0.576710 8.2:+38365063 MS.gene25294:CDS
GAAGGGAAAAGATTAGTGAA+AGG 0.577890 8.2:+38366451 MS.gene25294:CDS
GGTGGTGATGGTAAAGTTGA+AGG 0.578873 8.2:+38365971 MS.gene25294:CDS
TTTCCAGCGGCGATTAATGG+CGG 0.585609 8.2:+38364965 MS.gene25294:CDS
GTTAATTCAAGACTCAATAC+CGG 0.586424 8.2:+38366947 MS.gene25294:CDS
ATTGGCACCGCCATTACTGA+TGG 0.591223 8.2:-38365170 None:intergenic
TTAGGAGGGTCAGAAGGAGG+TGG 0.592041 8.2:-38366034 None:intergenic
AAGTGTGTTTCCATCAGTAA+TGG 0.593846 8.2:+38365160 MS.gene25294:CDS
ATCACTTCAGCGCCAAGTGG+AGG 0.597164 8.2:+38366793 MS.gene25294:CDS
TCTTGCTTAGGAGGGTCAGA+AGG 0.603501 8.2:-38366040 None:intergenic
GAGGTGGATTGGGACTAAGA+AGG 0.605645 8.2:+38364990 MS.gene25294:CDS
TTCAAAACAACTCTTGACTC+CGG 0.616543 8.2:-38365082 None:intergenic
AACATTACCTTATTACAACC+AGG 0.621430 8.2:-38366498 None:intergenic
GCATCAGGGAACAAGAATGA+GGG 0.629320 8.2:+38365950 MS.gene25294:CDS
GGATGTAATCTTGCTTAGGA+GGG 0.631066 8.2:-38366048 None:intergenic
TCCAGGAGCGATGATGAACG+AGG 0.631852 8.2:+38364883 MS.gene25294:CDS
TAATGGCGGTGCCAATGCCG+TGG 0.636011 8.2:+38365177 MS.gene25294:CDS
TGCTTAGGAGGGTCAGAAGG+AGG 0.637170 8.2:-38366037 None:intergenic
ATCCATGTTCGAGCTAGAAG+GGG 0.638122 8.2:+38366067 MS.gene25294:CDS
GGACCCGGTTTAAACCGGGA+TGG 0.638557 8.2:+38365052 MS.gene25294:CDS
GCTACAAGAGAGCCAAGCAG+AGG 0.640109 8.2:+38367597 MS.gene25294:CDS
TGGTTACATATGCAGGTAGG+TGG 0.652770 8.2:+38367633 MS.gene25294:CDS
GGAGATCTGGCAGTTTCCAG+CGG 0.658016 8.2:+38364952 MS.gene25294:CDS
TCAATCACTTCAGCGCCAAG+TGG 0.659625 8.2:+38366790 MS.gene25294:CDS
ATAGAATAGATACCTCCACT+TGG 0.671733 8.2:-38366805 None:intergenic
TACCACCACCAACACCACCA+TGG 0.672358 8.2:-38365105 None:intergenic
TGTGTTTCCATCAGTAATGG+CGG 0.675613 8.2:+38365163 MS.gene25294:CDS
TCAGGGAACAAGAATGAGGG+TGG 0.675624 8.2:+38365953 MS.gene25294:CDS
AGTCAGTTCAGGAAAGCATG+CGG 0.677155 8.2:+38365997 MS.gene25294:CDS
GAATGGTTACATATGCAGGT+AGG 0.689550 8.2:+38367630 MS.gene25294:CDS
CCAGGAGCGATGATGAACGA+GGG 0.693487 8.2:+38364884 MS.gene25294:CDS
GAAAACGGACTAAAGCATCA+GGG 0.713041 8.2:+38365936 MS.gene25294:CDS
CCTAAACCGTTCCCAAACTG+CGG 0.713413 8.2:-38365013 None:intergenic
ATTGTGCAGAATGATAGTGA+TGG 0.726537 8.2:+38365914 MS.gene25294:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTAAATTATTACAATAA+AGG - chr8.2:38365829-38365848 None:intergenic 10.0%
!! TTAATGGAATTATTATTATT+TGG + chr8.2:38365891-38365910 MS.gene25294:intron 10.0%
!! TTTAATGAATATACTTAAAA+CGG + chr8.2:38365356-38365375 MS.gene25294:intron 10.0%
!!! AAAACATAATAAATTTTGAA+AGG - chr8.2:38366861-38366880 None:intergenic 10.0%
!!! TATTAAATATATGTATTTTG+GGG + chr8.2:38365295-38365314 MS.gene25294:intron 10.0%
!!! TGTGTTTTTTATTTTATTAT+TGG + chr8.2:38365442-38365461 MS.gene25294:intron 10.0%
!! AGTTTCAATATAAAAATCAA+GGG - chr8.2:38367013-38367032 None:intergenic 15.0%
!! ATAATAATAAACCAAATGAA+AGG + chr8.2:38366588-38366607 MS.gene25294:intron 15.0%
!! TTATGGAAAATGTAAATTTA+TGG + chr8.2:38366362-38366381 MS.gene25294:intron 15.0%
!!! TAGTTTTTTTGTGTTATATT+TGG + chr8.2:38365224-38365243 MS.gene25294:intron 15.0%
!! AAAGAAAATAATGAATACCA+CGG - chr8.2:38365197-38365216 None:intergenic 20.0%
!! ATATGTGTATTTGATGTATT+TGG + chr8.2:38365852-38365871 MS.gene25294:intron 20.0%
!! GAGTTTCAATATAAAAATCA+AGG - chr8.2:38367014-38367033 None:intergenic 20.0%
!! TAAAAAGAGTTGTAAGTAAA+GGG - chr8.2:38366135-38366154 None:intergenic 20.0%
!! TTAAAAAGAGTTGTAAGTAA+AGG - chr8.2:38366136-38366155 None:intergenic 20.0%
!! TTTAGTAATTTCCTTTCATT+TGG - chr8.2:38366602-38366621 None:intergenic 20.0%
!!! AACTGTTATTTTCTTTTCAT+GGG - chr8.2:38366649-38366668 None:intergenic 20.0%
!!! AAGATTTTGCTTCATTTTTT+TGG + chr8.2:38365489-38365508 MS.gene25294:intron 20.0%
!!! AATTTTTCTCCAGAATAATT+AGG - chr8.2:38365806-38365825 None:intergenic 20.0%
!!! AGATTTTGCTTCATTTTTTT+GGG + chr8.2:38365490-38365509 MS.gene25294:intron 20.0%
!!! AGGAAAATTTTCAAATAAAG+AGG - chr8.2:38367063-38367082 None:intergenic 20.0%
!!! ATCTATTCTATTTCTGATTT+TGG + chr8.2:38366817-38366836 MS.gene25294:intron 20.0%
!!! ATGATGTTAAATCTTGTTTA+TGG + chr8.2:38366345-38366364 MS.gene25294:intron 20.0%
!!! GGAAAATTTTCAAATAAAGA+GGG - chr8.2:38367062-38367081 None:intergenic 20.0%
!!! TAACTGTTATTTTCTTTTCA+TGG - chr8.2:38366650-38366669 None:intergenic 20.0%
!!! TTCACTTTTGATTTTAAAAC+TGG + chr8.2:38365607-38365626 MS.gene25294:intron 20.0%
!!! TTTCTTCAATTTAGGTTATT+GGG + chr8.2:38366732-38366751 MS.gene25294:intron 20.0%
!!! TTTTTTGTGTTATATTTGGA+AGG + chr8.2:38365228-38365247 MS.gene25294:intron 20.0%
! ATTATAACTGACCAACAATT+AGG - chr8.2:38366680-38366699 None:intergenic 25.0%
! CATCATTGTTTCAAAAACAT+TGG + chr8.2:38367493-38367512 MS.gene25294:intron 25.0%
! GAAAGGAAATTACTAAAAGT+AGG + chr8.2:38366605-38366624 MS.gene25294:intron 25.0%
! GATAAATATACTTGATTGAG+AGG + chr8.2:38367410-38367429 MS.gene25294:intron 25.0%
! TGAACATTGGATTAATCTAA+GGG - chr8.2:38367374-38367393 None:intergenic 25.0%
! TTGAACATTGGATTAATCTA+AGG - chr8.2:38367375-38367394 None:intergenic 25.0%
!! CTTTCTTCAATTTAGGTTAT+TGG + chr8.2:38366731-38366750 MS.gene25294:intron 25.0%
!! TATGCAAACTTATTCAAGTT+TGG + chr8.2:38365630-38365649 MS.gene25294:intron 25.0%
!! TGTTTAACACTTACATCTTT+TGG - chr8.2:38366989-38367008 None:intergenic 25.0%
!! TTGATGTATTTGGAATTAGT+CGG + chr8.2:38365862-38365881 MS.gene25294:intron 25.0%
!!! ACTCTTATGTTATCGTTTTT+AGG + chr8.2:38366157-38366176 MS.gene25294:intron 25.0%
!!! CATTTTTTTGGGTACTTAAA+AGG + chr8.2:38365501-38365520 MS.gene25294:intron 25.0%
!!! TCAAAATTTTGTTTCGAACT+TGG + chr8.2:38365764-38365783 MS.gene25294:intron 25.0%
!!! TTTTTTTTCTCTTTCCAGTA+TGG + chr8.2:38367531-38367550 MS.gene25294:intron 25.0%
AAATGAAGCAAAATCTTGAG+CGG - chr8.2:38365486-38365505 None:intergenic 30.0%
AACATTACCTTATTACAACC+AGG - chr8.2:38366501-38366520 None:intergenic 30.0%
AATGGTTGTCCTAATTATTC+TGG + chr8.2:38365794-38365813 MS.gene25294:intron 30.0%
AATTAGTCGGTGTGATTTAA+TGG + chr8.2:38365875-38365894 MS.gene25294:intron 30.0%
ACTTCTCAATATCAAGAGTT+AGG + chr8.2:38366308-38366327 MS.gene25294:intron 30.0%
CTGGAAAGAGAAAAAAAACT+AGG - chr8.2:38367529-38367548 None:intergenic 30.0%
GAGGACACAGATTAAAAATT+TGG + chr8.2:38367429-38367448 MS.gene25294:intron 30.0%
GTTAATTCAAGACTCAATAC+CGG + chr8.2:38366947-38366966 MS.gene25294:CDS 30.0%
GTTATGATCTTCCTAATTGT+TGG + chr8.2:38366666-38366685 MS.gene25294:intron 30.0%
GTTGAGTCTTTCTTCAATTT+AGG + chr8.2:38366724-38366743 MS.gene25294:intron 30.0%
TACAGCTAAAGATTGAACAT+TGG - chr8.2:38367387-38367406 None:intergenic 30.0%
TCACAAAACGGTAGATAATT+AGG - chr8.2:38365731-38365750 None:intergenic 30.0%
TGAAAGGATGAAAATTCTAC+AGG + chr8.2:38366467-38366486 MS.gene25294:CDS 30.0%
TGAGAGCAGAAAAAATTAAC+AGG - chr8.2:38366531-38366550 None:intergenic 30.0%
TGCTCTCATATTCACATAAA+CGG + chr8.2:38366543-38366562 MS.gene25294:intron 30.0%
TGTTGCAAGTATGTATAACA+AGG + chr8.2:38367138-38367157 MS.gene25294:intron 30.0%
TTGCAATCATTGTCACAAAA+CGG - chr8.2:38365743-38365762 None:intergenic 30.0%
! AGAATGATAGTGATGGAAAA+CGG + chr8.2:38365921-38365940 MS.gene25294:intron 30.0%
! CAGTGTTCAACTTGTATTTT+TGG + chr8.2:38365398-38365417 MS.gene25294:intron 30.0%
! TTAACACTTACATCTTTTGG+AGG - chr8.2:38366986-38367005 None:intergenic 30.0%
! TTCACAAACTATTTTGCCTA+TGG + chr8.2:38365558-38365577 MS.gene25294:intron 30.0%
! TTTAGTTCCTGGTTGTAATA+AGG + chr8.2:38366491-38366510 MS.gene25294:CDS 30.0%
!! TATTTTGGGGAGTGATTAAT+TGG + chr8.2:38365308-38365327 MS.gene25294:intron 30.0%
AACATGCCAATTAGAAACAG+AGG - chr8.2:38366411-38366430 None:intergenic 35.0%
AAGTGTGTTTCCATCAGTAA+TGG + chr8.2:38365160-38365179 MS.gene25294:CDS 35.0%
AATAATGAATACCACGGCAT+TGG - chr8.2:38365191-38365210 None:intergenic 35.0%
AATGAAGCAAAATCTTGAGC+GGG - chr8.2:38365485-38365504 None:intergenic 35.0%
ACATGGATGTAATCTTGCTT+AGG - chr8.2:38366055-38366074 None:intergenic 35.0%
ACTCATGAGTATAGTAGTTC+TGG + chr8.2:38367106-38367125 MS.gene25294:intron 35.0%
ACTCTTGATATTGAGAAGTG+CGG - chr8.2:38366307-38366326 None:intergenic 35.0%
ATAGAATAGATACCTCCACT+TGG - chr8.2:38366808-38366827 None:intergenic 35.0%
ATGAATGATAGCTTCTCACT+AGG + chr8.2:38367270-38367289 MS.gene25294:intron 35.0%
GAAGGGAAAAGATTAGTGAA+AGG + chr8.2:38366451-38366470 MS.gene25294:CDS 35.0%
TGAAGAATGTCTGCAAAAGA+TGG - chr8.2:38367169-38367188 None:intergenic 35.0%
TGTTCAATCTTTAGCTGTAG+AGG + chr8.2:38367388-38367407 MS.gene25294:intron 35.0%
TTCAAAACAACTCTTGACTC+CGG - chr8.2:38365085-38365104 None:intergenic 35.0%
TTCGAACTTGGATGTCTAAA+TGG + chr8.2:38365776-38365795 MS.gene25294:intron 35.0%
! ATTCTACAGGATTTAGTTCC+TGG + chr8.2:38366480-38366499 MS.gene25294:CDS 35.0%
! ATTGTGCAGAATGATAGTGA+TGG + chr8.2:38365914-38365933 MS.gene25294:intron 35.0%
! ATTTTCCTTCTGACAAGACA+TGG + chr8.2:38367075-38367094 MS.gene25294:intron 35.0%
! CAGCATAAGGACCAAAATTT+TGG + chr8.2:38365685-38365704 MS.gene25294:intron 35.0%
! CTTGTAGCTTGTGAAACAAA+TGG - chr8.2:38367585-38367604 None:intergenic 35.0%
! GTTTGAGATTACACTTCCAT+AGG - chr8.2:38365577-38365596 None:intergenic 35.0%
! TTAGGTTATTGGGAAAGCAT+TGG + chr8.2:38366742-38366761 MS.gene25294:intron 35.0%
!! ACTTACATCTTTTGGAGGAA+AGG - chr8.2:38366981-38367000 None:intergenic 35.0%
!! TCTATGCCTCTGTTTCTAAT+TGG + chr8.2:38366402-38366421 MS.gene25294:intron 35.0%
!! TCTGTTTCTAATTGGCATGT+TGG + chr8.2:38366410-38366429 MS.gene25294:intron 35.0%
!!! TCAAGAGTTGTTTTGAACCA+TGG + chr8.2:38365088-38365107 MS.gene25294:CDS 35.0%
ACCAGAATGGTTACATATGC+AGG + chr8.2:38367626-38367645 MS.gene25294:CDS 40.0%
ACCTGCATATGTAACCATTC+TGG - chr8.2:38367630-38367649 None:intergenic 40.0%
ATTACCATCCCGGTTTAAAC+CGG - chr8.2:38365059-38365078 None:intergenic 40.0%
CAACAAACGTTTGATCTTGC+CGG + chr8.2:38367555-38367574 MS.gene25294:CDS 40.0%
CAAGTTTGGTCTCGATTTCA+AGG + chr8.2:38365644-38365663 MS.gene25294:intron 40.0%
CAGATCTCCGCTAAACTAAA+CGG - chr8.2:38364941-38364960 None:intergenic 40.0%
CTATGATGTCACAGCCAAAA+CGG - chr8.2:38366252-38366271 None:intergenic 40.0%
GAATGGTTACATATGCAGGT+AGG + chr8.2:38367630-38367649 MS.gene25294:CDS 40.0%
GATGTCTTTGCTACAGCATA+AGG + chr8.2:38365672-38365691 MS.gene25294:intron 40.0%
GGACAATAAACAGGCTAGAA+GGG + chr8.2:38366434-38366453 MS.gene25294:intron 40.0%
GGATGTAATCTTGCTTAGGA+GGG - chr8.2:38366051-38366070 None:intergenic 40.0%
GTCGTATTTCCATTCCCATT+CGG - chr8.2:38364917-38364936 None:intergenic 40.0%
GTTTCTAATTGGCATGTTGG+TGG + chr8.2:38366413-38366432 MS.gene25294:intron 40.0%
TGGACAATAAACAGGCTAGA+AGG + chr8.2:38366433-38366452 MS.gene25294:intron 40.0%
TGGATGTAATCTTGCTTAGG+AGG - chr8.2:38366052-38366071 None:intergenic 40.0%
TGTGTTTCCATCAGTAATGG+CGG + chr8.2:38365163-38365182 MS.gene25294:CDS 40.0%
TTGTGAAACAAATGGCATGC+CGG - chr8.2:38367577-38367596 None:intergenic 40.0%
TTTAAGAAGCTTGCAACCTC+TGG + chr8.2:38367313-38367332 MS.gene25294:intron 40.0%
! AGTAGGAAAAACGTGCTACT+TGG + chr8.2:38366622-38366641 MS.gene25294:intron 40.0%
! CAAACGTTTGTTGACCATAC+TGG - chr8.2:38367548-38367567 None:intergenic 40.0%
! CATGTTGGTGGACAATAAAC+AGG + chr8.2:38366425-38366444 MS.gene25294:intron 40.0%
! GAGCGAAGTAGCCAAAATTT+TGG - chr8.2:38365699-38365718 None:intergenic 40.0%
! TTAGGACAGTTTGGTGAGTT+TGG + chr8.2:38365031-38365050 MS.gene25294:CDS 40.0%
!! GAAAACGGACTAAAGCATCA+GGG + chr8.2:38365936-38365955 MS.gene25294:CDS 40.0%
!! GTAGGAAAAACGTGCTACTT+GGG + chr8.2:38366623-38366642 MS.gene25294:intron 40.0%
!!! AGAGTTGTTTTGAACCATGG+TGG + chr8.2:38365091-38365110 MS.gene25294:CDS 40.0%
AACAAGAATGAGGGTGGTGA+TGG + chr8.2:38365959-38365978 MS.gene25294:CDS 45.0%
AACCTCTGGTCTCTGCATAA+TGG + chr8.2:38367327-38367346 MS.gene25294:intron 45.0%
AACGAGGGTTCATTTCCGAA+TGG + chr8.2:38364899-38364918 MS.gene25294:CDS 45.0%
ACATCCATGTTCGAGCTAGA+AGG + chr8.2:38366065-38366084 MS.gene25294:CDS 45.0%
ACCTCTGGTCTCTGCATAAT+GGG + chr8.2:38367328-38367347 MS.gene25294:intron 45.0%
ACGAGGGTTCATTTCCGAAT+GGG + chr8.2:38364900-38364919 MS.gene25294:CDS 45.0%
AGCATCAGGGAACAAGAATG+AGG + chr8.2:38365949-38365968 MS.gene25294:CDS 45.0%
AGTTTGGACCCGGTTTAAAC+CGG + chr8.2:38365047-38365066 MS.gene25294:CDS 45.0%
ATCCATGTTCGAGCTAGAAG+GGG + chr8.2:38366067-38366086 MS.gene25294:CDS 45.0%
CATCCATGTTCGAGCTAGAA+GGG + chr8.2:38366066-38366085 MS.gene25294:CDS 45.0%
GCATCAGGGAACAAGAATGA+GGG + chr8.2:38365950-38365969 MS.gene25294:CDS 45.0%
GGTTCATTTCCGAATGGGAA+TGG + chr8.2:38364905-38364924 MS.gene25294:CDS 45.0%
GGTTTAAACCGGGATGGTAA+TGG + chr8.2:38365058-38365077 MS.gene25294:CDS 45.0%
GTTGAAGGAGAAGTCAGTTC+AGG + chr8.2:38365986-38366005 MS.gene25294:CDS 45.0%
TGGTTACATATGCAGGTAGG+TGG + chr8.2:38367633-38367652 MS.gene25294:CDS 45.0%
TTACATATGCAGGTAGGTGG+TGG + chr8.2:38367636-38367655 MS.gene25294:CDS 45.0%
TTACCATCCCGGTTTAAACC+GGG - chr8.2:38365058-38365077 None:intergenic 45.0%
TTACGCGTTCTGCAAGACTA+TGG - chr8.2:38366108-38366127 None:intergenic 45.0%
! AGTCAGTTCAGGAAAGCATG+CGG + chr8.2:38365997-38366016 MS.gene25294:CDS 45.0%
! CGTTTAGTTTAGCGGAGATC+TGG + chr8.2:38364939-38364958 MS.gene25294:CDS 45.0%
! TACGACGCCGTTTAGTTTAG+CGG + chr8.2:38364931-38364950 MS.gene25294:CDS 45.0%
!! GGAAAACGGACTAAAGCATC+AGG + chr8.2:38365935-38365954 MS.gene25294:CDS 45.0%
!! GGTGGTGATGGTAAAGTTGA+AGG + chr8.2:38365971-38365990 MS.gene25294:CDS 45.0%
!! GTTTTGAACCATGGTGGTGT+TGG + chr8.2:38365097-38365116 MS.gene25294:CDS 45.0%
!!! CGTTTTGGCTGTGACATCAT+AGG + chr8.2:38366250-38366269 MS.gene25294:intron 45.0%
!!! AATATTAAATATATGTATTT+TGG + chr8.2:38365293-38365312 MS.gene25294:intron 5.0%
!!! ATATTAAATATATGTATTTT+GGG + chr8.2:38365294-38365313 MS.gene25294:intron 5.0%
ATTGGCACCGCCATTACTGA+TGG - chr8.2:38365173-38365192 None:intergenic 50.0%
CAGTTTCCAGCGGCGATTAA+TGG + chr8.2:38364962-38364981 MS.gene25294:CDS 50.0%
CCTAAACCGTTCCCAAACTG+CGG - chr8.2:38365016-38365035 None:intergenic 50.0%
GACTAAGAAGGCCGCAGTTT+GGG + chr8.2:38365002-38365021 MS.gene25294:CDS 50.0%
GCAGAGGTTCTTCACCAGAA+TGG + chr8.2:38367613-38367632 MS.gene25294:CDS 50.0%
GTGAGCCATGTCTTGTCAGA+AGG - chr8.2:38367083-38367102 None:intergenic 50.0%
GTTTGGACCCGGTTTAAACC+GGG + chr8.2:38365048-38365067 MS.gene25294:CDS 50.0%
TCAATCACTTCAGCGCCAAG+TGG + chr8.2:38366790-38366809 MS.gene25294:CDS 50.0%
TCAGGGAACAAGAATGAGGG+TGG + chr8.2:38365953-38365972 MS.gene25294:CDS 50.0%
TCTGGTGAAGAACCTCTGCT+TGG - chr8.2:38367612-38367631 None:intergenic 50.0%
TCTTGCTTAGGAGGGTCAGA+AGG - chr8.2:38366043-38366062 None:intergenic 50.0%
TGGAGGAAAGGCTTCAATGC+CGG - chr8.2:38366969-38366988 None:intergenic 50.0%
TTTCCAGCGGCGATTAATGG+CGG + chr8.2:38364965-38364984 MS.gene25294:CDS 50.0%
! CAGTTTGGTGAGTTTGGACC+CGG + chr8.2:38365037-38365056 MS.gene25294:CDS 50.0%
! GGGAACGGTTTAGGACAGTT+TGG + chr8.2:38365022-38365041 MS.gene25294:CDS 50.0%
! TTGAACCATGGTGGTGTTGG+TGG + chr8.2:38365100-38365119 MS.gene25294:CDS 50.0%
!! AAACCGGGATGGTAATGGAC+CGG + chr8.2:38365063-38365082 MS.gene25294:CDS 50.0%
!! GAGGTGGATTGGGACTAAGA+AGG + chr8.2:38364990-38365009 MS.gene25294:CDS 50.0%
!!! TGAGTTGAGAAGCGCCGTTT+TGG + chr8.2:38366235-38366254 MS.gene25294:intron 50.0%
ACTCCGGTCCATTACCATCC+CGG - chr8.2:38365069-38365088 None:intergenic 55.0%
AGAAGGCCGCAGTTTGGGAA+CGG + chr8.2:38365007-38365026 MS.gene25294:CDS 55.0%
ATCACTTCAGCGCCAAGTGG+AGG + chr8.2:38366793-38366812 MS.gene25294:CDS 55.0%
CCAGGAGCGATGATGAACGA+GGG + chr8.2:38364884-38364903 MS.gene25294:CDS 55.0%
CCGCAGTTTGGGAACGGTTT+AGG + chr8.2:38365013-38365032 MS.gene25294:CDS 55.0%
GCCCATTATGCAGAGACCAG+AGG - chr8.2:38367332-38367351 None:intergenic 55.0%
GCTACAAGAGAGCCAAGCAG+AGG + chr8.2:38367597-38367616 MS.gene25294:CDS 55.0%
GGACTAAGAAGGCCGCAGTT+TGG + chr8.2:38365001-38365020 MS.gene25294:CDS 55.0%
GGAGATCTGGCAGTTTCCAG+CGG + chr8.2:38364952-38364971 MS.gene25294:CDS 55.0%
TACCACCACCAACACCACCA+TGG - chr8.2:38365108-38365127 None:intergenic 55.0%
TCCAGGAGCGATGATGAACG+AGG + chr8.2:38364883-38364902 MS.gene25294:CDS 55.0%
TGCTTAGGAGGGTCAGAAGG+AGG - chr8.2:38366040-38366059 None:intergenic 55.0%
TTAGGAGGGTCAGAAGGAGG+TGG - chr8.2:38366037-38366056 None:intergenic 55.0%
!! AACCATGGTGGTGTTGGTGG+TGG + chr8.2:38365103-38365122 MS.gene25294:CDS 55.0%
!! GACCCCTTCTAGCTCGAACA+TGG - chr8.2:38366072-38366091 None:intergenic 55.0%
CCCTCGTTCATCATCGCTCC+TGG - chr8.2:38364887-38364906 None:intergenic 60.0%
GGACCCGGTTTAAACCGGGA+TGG + chr8.2:38365052-38365071 MS.gene25294:CDS 60.0%
TAATGGCGGCGGAGGTGGAT+TGG + chr8.2:38364979-38364998 MS.gene25294:CDS 60.0%
! AATGGCGGCGGAGGTGGATT+GGG + chr8.2:38364980-38364999 MS.gene25294:CDS 60.0%
! TAATGGCGGTGCCAATGCCG+TGG + chr8.2:38365177-38365196 MS.gene25294:CDS 60.0%
CCAGCGGCGATTAATGGCGG+CGG + chr8.2:38364968-38364987 MS.gene25294:CDS 65.0%
GCGATTAATGGCGGCGGAGG+TGG + chr8.2:38364974-38364993 MS.gene25294:CDS 65.0%
CCGCCGCCATTAATCGCCGC+TGG - chr8.2:38364971-38364990 None:intergenic 70.0%
GCGGCGATTAATGGCGGCGG+AGG + chr8.2:38364971-38364990 MS.gene25294:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 38364878 38367677 38364878 ID=MS.gene25294
chr8.2 mRNA 38364878 38367677 38364878 ID=MS.gene25294.t1;Parent=MS.gene25294
chr8.2 exon 38364878 38365198 38364878 ID=MS.gene25294.t1.exon1;Parent=MS.gene25294.t1
chr8.2 CDS 38364878 38365198 38364878 ID=cds.MS.gene25294.t1;Parent=MS.gene25294.t1
chr8.2 exon 38365923 38366123 38365923 ID=MS.gene25294.t1.exon2;Parent=MS.gene25294.t1
chr8.2 CDS 38365923 38366123 38365923 ID=cds.MS.gene25294.t1;Parent=MS.gene25294.t1
chr8.2 exon 38366447 38366512 38366447 ID=MS.gene25294.t1.exon3;Parent=MS.gene25294.t1
chr8.2 CDS 38366447 38366512 38366447 ID=cds.MS.gene25294.t1;Parent=MS.gene25294.t1
chr8.2 exon 38366746 38366814 38366746 ID=MS.gene25294.t1.exon4;Parent=MS.gene25294.t1
chr8.2 CDS 38366746 38366814 38366746 ID=cds.MS.gene25294.t1;Parent=MS.gene25294.t1
chr8.2 exon 38366923 38366994 38366923 ID=MS.gene25294.t1.exon5;Parent=MS.gene25294.t1
chr8.2 CDS 38366923 38366994 38366923 ID=cds.MS.gene25294.t1;Parent=MS.gene25294.t1
chr8.2 exon 38367549 38367677 38367549 ID=MS.gene25294.t1.exon6;Parent=MS.gene25294.t1
chr8.2 CDS 38367549 38367677 38367549 ID=cds.MS.gene25294.t1;Parent=MS.gene25294.t1
Gene Sequence

>MS.gene25294

ATGGATCCAGGAGCGATGATGAACGAGGGTTCATTTCCGAATGGGAATGGAAATACGACGCCGTTTAGTTTAGCGGAGATCTGGCAGTTTCCAGCGGCGATTAATGGCGGCGGAGGTGGATTGGGACTAAGAAGGCCGCAGTTTGGGAACGGTTTAGGACAGTTTGGTGAGTTTGGACCCGGTTTAAACCGGGATGGTAATGGACCGGAGTCAAGAGTTGTTTTGAACCATGGTGGTGTTGGTGGTGGTAAGAAGAGACGTGACTCTGAAGATGATTCTGCTAAGTGTGTTTCCATCAGTAATGGCGGTGCCAATGCCGTGGTATTCATTATTTTCTTTCTTTTTTTAGTTTTTTTGTGTTATATTTGGAAGGAATTCATTGCAGTAACTGTTTGATTAAATAAAGTATAAATTAAATATTAAATATATGTATTTTGGGGAGTGATTAATTGGTTGATTAAGAAAGATGAGTTGTTGTTTTAATGAATATACTTAAAACGGATCTAATTATGTTGTTAATCAGTGTTCAACTTGTATTTTTGGATTTTGTATATCTACTGAAAATGTGTTTTTTATTTTATTATTGGAATTTTTTTGCAATTTTCCCGCTCAAGATTTTGCTTCATTTTTTTGGGTACTTAAAAGGAATAAAATAGTGTTCTAATGATGTTTTTAGCAATTTCACAAACTATTTTGCCTATGGAAGTGTAATCTCAAACACTTTACTATTTCACTTTTGATTTTAAAACTGGTATGCAAACTTATTCAAGTTTGGTCTCGATTTCAAGGATTTTGATGTCTTTGCTACAGCATAAGGACCAAAATTTTGGCTACTTCGCTCATATTTAAACCTAATTATCTACCGTTTTGTGACAATGATTGCAATTCAAAATTTTGTTTCGAACTTGGATGTCTAAATGGTTGTCCTAATTATTCTGGAGAAAAATTCCTTTATTGTAATAATTTAGTTATCTATATGTGTATTTGATGTATTTGGAATTAGTCGGTGTGATTTAATGGAATTATTATTATTTGGATTGTGCAGAATGATAGTGATGGAAAACGGACTAAAGCATCAGGGAACAAGAATGAGGGTGGTGATGGTAAAGTTGAAGGAGAAGTCAGTTCAGGAAAGCATGCGGAGCAAAGCAGTAAGCCACCTCCTTCTGACCCTCCTAAGCAAGATTACATCCATGTTCGAGCTAGAAGGGGTCAAGCTACTGATAGCCATAGTCTTGCAGAACGCGTAATTTACCCTTTACTTACAACTCTTTTTAAAACTCTTATGTTATCGTTTTTAGGTTCTTTTTCTCTGTCTAATTGTTAAGATCAATTTCTTAAGCAAGATAACAGCAATTGAGTTGAGAAGCGCCGTTTTGGCTGTGACATCATAGGTTTTGATAATCAGATTATCAGACGTATTTAACCGCACTTCTCAATATCAAGAGTTAGGACACAATCATTGCTATGATGTTAAATCTTGTTTATGGAAAATGTAAATTTATGGTTTTGTTGCGATTAGAGTCTATGCCTCTGTTTCTAATTGGCATGTTGGTGGACAATAAACAGGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTACAGGATTTAGTTCCTGGTTGTAATAAGGTAATGTTTTTACTACCTGTTAATTTTTTCTGCTCTCATATTCACATAAACGGAAATGAAATGAAAATAGTAATAATAATAATAAACCAAATGAAAGGAAATTACTAAAAGTAGGAAAAACGTGCTACTTGGGCCCATGAAAAGAAAATAACAGTTATGATCTTCCTAATTGTTGGTCAGTTATAATCTCATATTTTATATGAAATAATAAGTTGAGTCTTTCTTCAATTTAGGTTATTGGGAAAGCATTGGTGCTTGATGAGATAATTAATTATATTCAATCACTTCAGCGCCAAGTGGAGGTATCTATTCTATTTCTGATTTTGGTATTTACTGAATTATAATCCTTTCAAAATTTATTATGTTTTGAAATTGATTTTTGACTATTGTAATGTTAATTGATGTCACAGTTTTTATCGATGAAACTTGAAGCAGTTAATTCAAGACTCAATACCGGCATTGAAGCCTTTCCTCCAAAAGATGTAAGTGTTAAACATCCCTTGATTTTTATATTGAAACTCTAATCAAGTTGAAAGCTTGTTTCTACCCTCTTTATTTGAAAATTTTCCTTCTGACAAGACATGGCTCACATAACTCATGAGTATAGTAGTTCTGGTGATTGCTATGTTGCAAGTATGTATAACAAGGTTGAACCATCTTTTGCAGACATTCTTCACGCACAACATTTTTGTTTCATTTGCAAATTTTGTTGTTGAGTACTCTGCAATTTTTGTTGTTGTTGAGTACTTTGCTTCAAATGAATGATAGCTTCTCACTAGGTGCTTTTCAGAACTGATTAATTTAAGAAGCTTGCAACCTCTGGTCTCTGCATAATGGGCGAGAGTGTTGAACTCTCAGCCCTTAGATTAATCCAATGTTCAATCTTTAGCTGTAGAGGATAAATATACTTGATTGAGAGGACACAGATTAAAAATTTGGATTTAAATGATTCTAAATGATTGATTTAGTTTTTTATTATTCATCATTGTTTCAAAAACATTGGACTTACAAGACCTAGTTTTTTTTCTCTTTCCAGTATGGTCAACAAACGTTTGATCTTGCCGGCATGCCATTTGTTTCACAAGCTACAAGAGAGCCAAGCAGAGGTTCTTCACCAGAATGGTTACATATGCAGGTAGGTGGTGGTTTCGAAAGAACGACGTAG
Protein sequence

>MS.gene25294.t1

MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNGLGQFGEFGPGLNRDGNGPESRVVLNHGGVGGGKKRRDSEDDSAKCVSISNGGANAVNDSDGKRTKASGNKNEGGDGKVEGEVSSGKHAEQSSKPPPSDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQQTFDLAGMPFVSQATREPSRGSSPEWLHMQVGGGFERTT