AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25490.t1 MTR_8g467490 96.491 399 9 3 1 398 1 395 0.0 786
MS.gene25490.t1 MTR_5g040420 60.417 432 96 12 1 398 1 391 3.25e-161 458
MS.gene25490.t1 MTR_6g011860 49.512 410 176 10 1 398 1 391 7.21e-125 366
MS.gene25490.t1 MTR_5g090970 50.439 228 104 3 9 233 12 233 1.26e-74 235
MS.gene25490.t1 MTR_2g068880 60.753 186 63 6 12 191 19 200 6.92e-74 233
MS.gene25490.t1 MTR_2g068920 63.314 169 55 4 12 174 18 185 2.86e-72 228
MS.gene25490.t1 MTR_5g090970 50.000 228 104 4 9 233 12 232 3.01e-72 229
MS.gene25490.t1 MTR_2g080010 43.111 225 115 3 1 213 1 224 6.62e-61 201
MS.gene25490.t1 MTR_4g089135 52.273 176 70 2 17 178 17 192 2.63e-60 199
MS.gene25490.t1 MTR_4g134460 51.163 172 72 3 12 183 51 210 4.60e-59 198
MS.gene25490.t1 MTR_7g085220 54.217 166 64 4 17 175 10 170 3.57e-58 193
MS.gene25490.t1 MTR_2157s0010 49.000 200 90 5 17 205 10 208 1.12e-57 189
MS.gene25490.t1 MTR_5g041940 54.321 162 67 3 17 178 5 159 2.91e-57 188
MS.gene25490.t1 MTR_4g036030 44.976 209 98 5 17 222 9 203 3.15e-56 188
MS.gene25490.t1 MTR_2g093810 54.430 158 67 2 17 174 16 168 3.98e-56 187
MS.gene25490.t1 MTR_8g094580 53.165 158 66 3 17 174 9 158 1.00e-55 185
MS.gene25490.t1 MTR_4g081870 55.000 160 65 3 17 176 11 163 2.03e-55 184
MS.gene25490.t1 MTR_3g088110 48.634 183 67 4 17 186 9 177 5.34e-55 183
MS.gene25490.t1 MTR_6g012670 40.293 273 130 7 1 258 5 259 1.57e-54 183
MS.gene25490.t1 MTR_5g012080 49.133 173 74 3 17 186 9 170 2.28e-54 184
MS.gene25490.t1 MTR_4g108760 45.876 194 83 3 17 197 19 203 3.77e-53 181
MS.gene25490.t1 MTR_7g100990 50.595 168 73 4 13 177 8 168 4.94e-53 179
MS.gene25490.t1 MTR_3g435150 50.000 176 78 3 1 175 1 167 6.63e-53 178
MS.gene25490.t1 MTR_2g079990 49.451 182 80 5 17 198 18 187 6.75e-53 180
MS.gene25490.t1 MTR_8g076110 43.367 196 93 5 11 202 2 183 9.46e-53 178
MS.gene25490.t1 MTR_4g101680 47.619 168 72 3 17 181 9 163 2.57e-52 179
MS.gene25490.t1 MTR_3g096920 51.266 158 68 3 17 174 9 157 2.92e-52 176
MS.gene25490.t1 MTR_5g021710 45.109 184 83 5 9 187 2 172 4.63e-52 177
MS.gene25490.t1 MTR_8g059170 51.497 167 71 5 17 183 16 172 8.59e-52 176
MS.gene25490.t1 MTR_4g075980 49.143 175 72 4 12 185 12 170 8.83e-52 175
MS.gene25490.t1 MTR_2g064090 50.932 161 67 4 17 175 8 158 9.28e-52 177
MS.gene25490.t1 MTR_6g032770 45.455 176 88 2 12 186 14 182 1.70e-50 174
MS.gene25490.t1 MTR_2g078700 50.000 160 73 1 17 176 25 177 4.84e-50 173
MS.gene25490.t1 MTR_3g109340 48.588 177 76 3 1 177 12 173 1.68e-49 171
MS.gene25490.t1 MTR_3g109340 48.588 177 77 3 1 177 12 174 1.88e-49 171
MS.gene25490.t1 MTR_2g079990 45.098 204 84 6 17 198 18 215 2.72e-49 171
MS.gene25490.t1 MTR_3g096920 55.474 137 57 2 17 153 9 141 2.88e-49 169
MS.gene25490.t1 MTR_6g084430 46.471 170 78 3 11 180 1 157 4.01e-49 169
MS.gene25490.t1 MTR_6g477900 42.328 189 95 4 17 203 8 184 5.60e-49 166
MS.gene25490.t1 MTR_7g085260 41.589 214 100 4 17 212 19 225 5.80e-49 170
MS.gene25490.t1 MTR_4g035590 50.000 164 63 4 17 176 10 158 9.28e-49 169
MS.gene25490.t1 MTR_3g064580 45.596 193 81 6 17 206 8 179 2.39e-48 174
MS.gene25490.t1 MTR_8g024480 46.988 166 77 4 17 176 17 177 6.64e-48 169
MS.gene25490.t1 MTR_3g070030 44.253 174 88 3 12 184 15 180 1.50e-47 166
MS.gene25490.t1 MTR_2g062730 46.012 163 73 3 17 176 12 162 2.13e-47 165
MS.gene25490.t1 MTR_5g069030 50.307 163 68 4 18 178 28 179 2.88e-47 171
MS.gene25490.t1 MTR_1g096430 46.108 167 74 4 11 174 3 156 6.19e-47 164
MS.gene25490.t1 MTR_5g076850 46.584 161 73 3 17 175 8 157 9.05e-47 169
MS.gene25490.t1 MTR_7g005280 45.604 182 85 3 1 182 1 168 9.77e-47 160
MS.gene25490.t1 MTR_1g008740 46.552 174 81 4 3 175 2 164 1.21e-46 163
MS.gene25490.t1 MTR_5g014300 46.707 167 66 4 17 174 8 160 1.48e-46 162
MS.gene25490.t1 MTR_1g008740 46.552 174 81 4 3 175 16 178 2.12e-46 163
MS.gene25490.t1 MTR_3g096140 45.732 164 76 4 13 174 5 157 3.33e-46 160
MS.gene25490.t1 MTR_3g116070 40.000 240 126 5 9 240 17 246 1.24e-45 160
MS.gene25490.t1 MTR_1g069805 36.910 233 122 4 17 246 12 222 1.48e-45 158
MS.gene25490.t1 MTR_3g096140 45.732 164 76 4 13 174 5 157 1.79e-45 160
MS.gene25490.t1 MTR_3g093050 47.273 165 74 4 18 180 25 178 1.91e-45 165
MS.gene25490.t1 MTR_3g093050 47.273 165 74 4 18 180 25 178 2.94e-45 165
MS.gene25490.t1 MTR_4g098630 46.784 171 79 4 17 184 8 169 3.08e-45 159
MS.gene25490.t1 MTR_7g011130 46.061 165 81 3 18 176 22 184 5.15e-45 159
MS.gene25490.t1 MTR_8g063550 40.805 174 90 4 15 186 6 168 6.91e-45 158
MS.gene25490.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 1.32e-44 160
MS.gene25490.t1 MTR_8g063550 43.827 162 78 4 15 174 6 156 1.33e-44 160
MS.gene25490.t1 MTR_2g064470 46.199 171 80 4 11 181 7 165 1.77e-44 156
MS.gene25490.t1 MTR_7g011120 45.283 159 85 1 18 176 11 167 3.08e-44 156
MS.gene25490.t1 MTR_1g097300 47.024 168 72 5 13 175 15 170 3.77e-44 161
MS.gene25490.t1 MTR_3g093040 43.529 170 82 5 14 180 106 264 1.31e-43 154
MS.gene25490.t1 MTR_7g097090 42.949 156 76 1 17 172 12 154 3.27e-42 150
MS.gene25490.t1 MTR_1g090723 46.951 164 73 6 17 177 10 162 4.38e-42 156
MS.gene25490.t1 MTR_8g093580 37.674 215 98 6 15 205 6 208 4.77e-42 154
MS.gene25490.t1 MTR_1g090723 44.311 167 72 5 17 177 10 161 4.85e-42 156
MS.gene25490.t1 MTR_1g090723 44.311 167 72 5 17 177 10 161 4.94e-42 155
MS.gene25490.t1 MTR_8g099750 44.516 155 80 2 17 171 16 164 2.69e-41 145
MS.gene25490.t1 MTR_1g090720 42.857 168 81 4 15 176 42 200 3.71e-41 152
MS.gene25490.t1 MTR_0036s0150 39.785 186 95 6 17 199 7 178 5.20e-40 149
MS.gene25490.t1 MTR_2g086880 48.031 127 63 2 15 140 18 142 3.28e-37 141
MS.gene25490.t1 MTR_2g086880 48.031 127 63 2 15 140 18 142 4.20e-37 142
MS.gene25490.t1 MTR_3g098810 42.857 168 89 3 17 182 16 178 8.16e-37 134
MS.gene25490.t1 MTR_8g023840 49.254 134 64 3 18 148 14 146 1.27e-36 137
MS.gene25490.t1 MTR_4g052620 35.023 217 124 6 11 222 1 205 1.80e-36 134
MS.gene25490.t1 MTR_3g096140 42.466 146 71 4 31 174 2 136 7.15e-35 131
MS.gene25490.t1 MTR_7g105170 30.000 250 156 9 15 257 4 241 1.08e-34 129
MS.gene25490.t1 MTR_3g070040 40.000 165 85 4 19 181 12 164 2.21e-34 130
MS.gene25490.t1 MTR_3g098810 49.618 131 62 2 17 145 16 144 2.42e-34 125
MS.gene25490.t1 MTR_2g086690 40.000 165 80 6 17 172 6 160 2.51e-32 122
MS.gene25490.t1 MTR_8g023860 47.244 127 63 3 18 141 15 140 4.38e-32 125
MS.gene25490.t1 MTR_8g094580 50.000 112 48 3 63 174 1 104 5.29e-32 121
MS.gene25490.t1 MTR_8g023900 37.870 169 87 4 18 183 196 349 8.61e-30 120
MS.gene25490.t1 MTR_8g023900 35.542 166 91 4 18 180 15 167 6.72e-29 117
MS.gene25490.t1 MTR_4g094302 37.342 158 88 2 17 174 13 159 1.46e-28 110
MS.gene25490.t1 MTR_8g023930 36.686 169 89 4 18 183 27 180 2.14e-28 116
MS.gene25490.t1 MTR_4g094302 40.476 126 67 1 17 142 13 130 7.93e-27 105
MS.gene25490.t1 MTR_8g023880 33.155 187 86 8 18 186 10 175 1.34e-21 94.0
MS.gene25490.t1 MTR_8g093790 32.738 168 82 6 17 184 12 148 1.46e-19 86.3
MS.gene25490.t1 MTR_7g070140 44.828 87 45 1 68 154 17 100 1.55e-19 84.7
MS.gene25490.t1 MTR_3g096400 31.481 162 96 5 17 173 9 160 2.79e-17 80.1
MS.gene25490.t1 MTR_7g083330 28.313 166 102 5 18 181 21 171 4.84e-16 76.3
MS.gene25490.t1 MTR_7g083370 33.333 126 76 5 18 140 13 133 2.07e-15 73.2
MS.gene25490.t1 MTR_7g083360 31.944 144 90 6 13 152 7 146 5.89e-15 72.4
MS.gene25490.t1 MTR_1g087190 58.333 48 19 1 17 63 7 54 1.41e-13 65.5
MS.gene25490.t1 MTR_7g070150 39.241 79 36 1 108 186 3 69 1.15e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25490.t1 AT1G26870 61.091 275 89 5 1 264 1 268 2.10e-108 325
MS.gene25490.t1 AT5G39820 66.667 204 55 4 2 192 7 210 2.04e-97 294
MS.gene25490.t1 AT2G43000 60.116 173 57 3 9 181 12 172 1.47e-72 228
MS.gene25490.t1 AT3G12910 56.284 183 71 5 1 175 5 186 5.65e-62 202
MS.gene25490.t1 AT2G02450 47.573 206 84 5 14 219 50 231 5.15e-60 199
MS.gene25490.t1 AT2G02450 47.573 206 84 5 14 219 50 231 5.46e-60 200
MS.gene25490.t1 AT3G15510 42.731 227 103 5 19 240 21 225 1.29e-58 195
MS.gene25490.t1 AT1G69490 45.813 203 103 4 17 219 11 206 3.56e-58 191
MS.gene25490.t1 AT3G04070 53.529 170 64 3 17 178 12 174 6.84e-58 192
MS.gene25490.t1 AT1G61110 53.143 175 71 4 17 183 18 189 2.43e-57 191
MS.gene25490.t1 AT3G04070 51.397 179 70 3 17 178 12 190 5.72e-57 191
MS.gene25490.t1 AT5G63790 44.186 215 101 6 3 215 36 233 7.54e-56 186
MS.gene25490.t1 AT5G63790 44.186 215 101 6 3 215 46 243 9.01e-56 186
MS.gene25490.t1 AT1G01720 52.410 166 71 3 17 182 9 166 5.51e-55 183
MS.gene25490.t1 AT4G27410 50.595 168 72 3 17 184 16 172 3.20e-54 182
MS.gene25490.t1 AT2G17040 50.286 175 70 4 12 185 3 161 3.53e-54 181
MS.gene25490.t1 AT1G76420 46.524 187 84 2 2 188 15 185 6.89e-54 182
MS.gene25490.t1 AT5G61430 35.811 296 145 6 1 286 1 261 1.71e-53 181
MS.gene25490.t1 AT5G08790 51.534 163 71 4 13 174 4 159 2.34e-53 179
MS.gene25490.t1 AT4G36160 47.701 174 75 4 17 187 12 172 4.00e-53 181
MS.gene25490.t1 AT4G36160 47.701 174 75 4 17 187 12 172 4.00e-53 181
MS.gene25490.t1 AT5G07680 43.868 212 100 3 17 218 5 207 4.48e-53 179
MS.gene25490.t1 AT1G12260 48.810 168 70 4 17 181 9 163 4.53e-53 180
MS.gene25490.t1 AT1G12260 48.810 168 70 4 17 181 9 163 4.69e-53 181
MS.gene25490.t1 AT4G36160 47.701 174 75 4 17 187 16 176 4.70e-53 181
MS.gene25490.t1 AT5G07680 43.868 212 100 3 17 218 19 221 6.10e-53 179
MS.gene25490.t1 AT1G52880 54.438 169 66 3 19 181 21 184 8.70e-53 179
MS.gene25490.t1 AT5G39610 44.554 202 89 4 17 206 22 212 1.03e-52 177
MS.gene25490.t1 AT1G77450 40.244 246 129 7 17 253 12 248 1.10e-52 176
MS.gene25490.t1 AT2G18060 47.701 174 74 5 17 187 11 170 2.65e-52 179
MS.gene25490.t1 AT2G18060 47.701 174 74 5 17 187 11 170 2.65e-52 179
MS.gene25490.t1 AT3G15500 51.190 168 67 4 17 182 16 170 4.87e-52 176
MS.gene25490.t1 AT2G24430 47.093 172 81 1 9 180 10 171 8.87e-52 176
MS.gene25490.t1 AT2G24430 47.093 172 81 1 9 180 10 171 8.87e-52 176
MS.gene25490.t1 AT1G52890 51.479 169 66 5 17 183 16 170 1.09e-51 176
MS.gene25490.t1 AT4G10350 36.934 287 137 9 17 293 11 263 2.86e-51 175
MS.gene25490.t1 AT1G62700 43.077 195 88 4 17 201 9 190 5.39e-51 176
MS.gene25490.t1 AT1G62700 43.077 195 88 4 17 201 9 190 5.39e-51 176
MS.gene25490.t1 AT3G17730 48.193 166 73 3 17 180 8 162 6.58e-51 171
MS.gene25490.t1 AT5G66300 44.240 217 98 7 17 225 14 215 1.80e-50 172
MS.gene25490.t1 AT3G29035 47.150 193 87 6 6 195 14 194 3.18e-50 172
MS.gene25490.t1 AT1G71930 38.550 262 128 9 11 263 5 242 3.38e-50 172
MS.gene25490.t1 AT1G71930 38.550 262 128 9 11 263 5 242 3.38e-50 172
MS.gene25490.t1 AT3G18400 48.235 170 76 3 11 180 1 158 3.50e-50 172
MS.gene25490.t1 AT5G62380 47.826 161 68 4 17 174 9 156 4.12e-50 172
MS.gene25490.t1 AT5G62380 47.826 161 68 4 17 174 9 156 4.12e-50 172
MS.gene25490.t1 AT5G18270 48.750 160 74 2 17 176 23 174 4.16e-50 172
MS.gene25490.t1 AT3G04060 48.256 172 77 3 17 184 22 185 4.35e-50 172
MS.gene25490.t1 AT4G27410 45.946 185 72 4 17 184 16 189 5.95e-50 171
MS.gene25490.t1 AT1G33280 50.307 163 64 3 17 176 10 158 6.37e-50 171
MS.gene25490.t1 AT1G65910 49.693 163 69 3 15 175 6 157 7.27e-50 178
MS.gene25490.t1 AT5G18270 48.125 160 75 2 17 176 23 174 2.25e-49 170
MS.gene25490.t1 AT3G03200 45.604 182 86 5 17 195 8 179 2.73e-49 174
MS.gene25490.t1 AT4G17980 47.500 160 75 2 17 174 8 160 5.26e-49 167
MS.gene25490.t1 AT4G17980 47.500 160 75 2 17 174 8 160 5.48e-49 168
MS.gene25490.t1 AT5G17260 46.199 171 80 4 17 185 8 168 1.26e-48 172
MS.gene25490.t1 AT3G15170 47.337 169 82 2 12 180 17 178 1.41e-48 167
MS.gene25490.t1 AT5G53950 45.930 172 86 2 13 184 15 179 1.78e-48 169
MS.gene25490.t1 AT3G61910 38.961 231 122 7 17 233 13 238 3.14e-48 167
MS.gene25490.t1 AT2G46770 46.108 167 81 3 17 176 18 182 1.37e-47 166
MS.gene25490.t1 AT3G10500 46.667 165 75 4 15 177 9 162 2.62e-46 167
MS.gene25490.t1 AT1G32770 45.122 164 84 3 17 176 18 179 1.19e-45 161
MS.gene25490.t1 AT4G35580 50.314 159 66 4 18 174 12 159 1.33e-45 165
MS.gene25490.t1 AT1G54330 46.707 167 73 3 17 181 8 160 1.41e-45 159
MS.gene25490.t1 AT1G33060 46.951 164 74 3 13 174 22 174 1.44e-45 166
MS.gene25490.t1 AT4G35580 50.314 159 66 4 18 174 12 159 1.53e-45 164
MS.gene25490.t1 AT1G33060 46.951 164 74 3 13 174 22 174 1.57e-45 166
MS.gene25490.t1 AT4G35580 50.314 159 66 4 18 174 12 159 1.58e-45 164
MS.gene25490.t1 AT5G13180 49.068 161 69 2 17 177 16 163 1.89e-45 157
MS.gene25490.t1 AT1G79580 46.626 163 71 4 17 176 19 168 1.99e-45 160
MS.gene25490.t1 AT1G79580 46.626 163 71 4 17 176 19 168 1.99e-45 160
MS.gene25490.t1 AT1G79580 46.626 163 71 4 17 176 19 168 1.99e-45 160
MS.gene25490.t1 AT1G79580 46.626 163 71 4 17 176 19 168 1.99e-45 160
MS.gene25490.t1 AT1G79580 46.626 163 71 4 17 176 19 168 1.99e-45 160
MS.gene25490.t1 AT1G32510 37.349 249 134 7 17 254 8 245 2.78e-45 158
MS.gene25490.t1 AT3G12977 43.258 178 91 3 2 179 5 172 4.15e-45 157
MS.gene25490.t1 AT5G46590 54.688 128 55 2 17 142 8 134 4.33e-45 157
MS.gene25490.t1 AT1G56010 45.556 180 77 5 2 174 6 171 6.67e-45 158
MS.gene25490.t1 AT5G46590 54.688 128 55 2 17 142 8 134 7.12e-45 157
MS.gene25490.t1 AT1G34180 45.087 173 82 3 7 177 8 169 8.45e-45 161
MS.gene25490.t1 AT3G10490 44.512 164 79 4 15 176 27 180 2.15e-44 154
MS.gene25490.t1 AT1G34190 44.828 174 81 4 7 177 8 169 3.09e-44 161
MS.gene25490.t1 AT1G34180 45.087 173 82 3 7 177 8 169 4.55e-44 161
MS.gene25490.t1 AT5G04410 45.055 182 83 7 15 193 9 176 1.01e-43 160
MS.gene25490.t1 AT3G10480 44.578 166 76 4 15 176 27 180 1.33e-43 157
MS.gene25490.t1 AT3G10480 44.048 168 73 4 15 176 27 179 1.81e-43 157
MS.gene25490.t1 AT3G10490 44.512 164 79 4 15 176 27 180 4.91e-43 156
MS.gene25490.t1 AT5G24590 46.199 171 79 4 9 176 6 166 9.30e-43 155
MS.gene25490.t1 AT1G34180 41.622 185 83 3 7 177 8 181 2.00e-42 155
MS.gene25490.t1 AT1G34180 41.622 185 83 3 7 177 8 181 9.27e-42 155
MS.gene25490.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.13e-41 152
MS.gene25490.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.13e-41 152
MS.gene25490.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.13e-41 152
MS.gene25490.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.13e-41 152
MS.gene25490.t1 AT5G09330 41.975 162 81 4 15 174 6 156 3.13e-41 152
MS.gene25490.t1 AT5G64060 31.786 280 158 10 15 285 6 261 1.32e-40 147
MS.gene25490.t1 AT3G49530 42.767 159 79 3 18 174 16 164 2.15e-40 148
MS.gene25490.t1 AT4G28530 41.379 174 73 3 17 174 12 172 2.19e-40 147
MS.gene25490.t1 AT3G49530 42.767 159 79 3 18 174 16 164 6.13e-40 148
MS.gene25490.t1 AT2G33480 41.899 179 90 4 1 179 1 165 9.85e-40 143
MS.gene25490.t1 AT5G22290 39.535 172 83 4 15 182 21 175 5.01e-39 143
MS.gene25490.t1 AT2G33480 41.341 179 89 4 1 179 1 163 1.70e-38 139
MS.gene25490.t1 AT3G10480 37.563 197 78 4 15 176 27 213 5.33e-38 144
MS.gene25490.t1 AT3G44290 46.825 126 64 2 16 140 15 138 1.04e-37 136
MS.gene25490.t1 AT2G27300 44.531 128 68 2 14 140 13 138 2.27e-37 138
MS.gene25490.t1 AT3G44290 46.825 126 64 2 16 140 15 138 3.58e-37 138
MS.gene25490.t1 AT5G04395 39.623 159 80 3 12 156 25 181 6.95e-35 127
MS.gene25490.t1 AT5G61430 33.476 233 111 5 63 286 1 198 1.35e-34 129
MS.gene25490.t1 AT1G32870 50.769 130 58 3 15 142 10 135 3.70e-33 130
MS.gene25490.t1 AT1G32870 50.769 130 58 3 15 142 10 135 4.01e-33 130
MS.gene25490.t1 AT2G43000 58.095 105 32 3 77 181 2 94 5.01e-33 123
MS.gene25490.t1 AT1G32870 50.769 130 58 3 15 142 46 171 7.86e-33 130
MS.gene25490.t1 AT5G22380 35.052 194 105 8 18 204 8 187 1.49e-30 117
MS.gene25490.t1 AT4G10350 33.473 239 118 8 62 293 12 216 1.75e-30 119
MS.gene25490.t1 AT5G64530 39.264 163 82 3 17 174 5 155 6.39e-30 114
MS.gene25490.t1 AT3G44350 35.429 175 95 5 11 178 1 164 2.11e-29 114
MS.gene25490.t1 AT3G12977 45.833 120 55 3 60 179 10 119 4.28e-29 113
MS.gene25490.t1 AT1G56010 49.138 116 43 3 63 174 1 104 7.14e-29 113
MS.gene25490.t1 AT5G64530 43.307 127 60 2 17 143 5 119 9.99e-29 110
MS.gene25490.t1 AT4G01550 43.284 134 72 3 16 145 5 138 2.38e-28 116
MS.gene25490.t1 AT3G44350 38.000 150 83 4 11 153 1 147 6.21e-28 108
MS.gene25490.t1 AT4G01520 34.737 190 102 7 18 202 7 179 7.83e-25 103
MS.gene25490.t1 AT4G01540 41.481 135 74 4 16 145 5 139 1.82e-24 104
MS.gene25490.t1 AT4G01540 40.411 146 79 5 16 156 5 147 2.93e-24 103
MS.gene25490.t1 AT4G01540 41.481 135 74 4 16 145 5 139 3.87e-24 104
MS.gene25490.t1 AT4G01540 40.411 146 79 5 16 156 5 147 4.60e-24 103
MS.gene25490.t1 AT1G02250 34.673 199 113 8 18 211 6 192 3.19e-23 100
MS.gene25490.t1 AT4G28530 40.476 126 59 2 17 126 12 137 2.78e-22 96.7
MS.gene25490.t1 AT1G02230 38.806 134 74 5 18 146 6 136 9.89e-22 95.9
MS.gene25490.t1 AT2G33480 40.179 112 56 3 68 179 8 108 6.00e-21 90.9
MS.gene25490.t1 AT3G04420 38.583 127 72 3 18 140 6 130 6.05e-21 92.4
MS.gene25490.t1 AT2G18060 47.368 95 36 4 93 187 2 82 9.50e-21 91.7
MS.gene25490.t1 AT3G04420 38.583 127 72 3 18 140 6 130 2.12e-20 92.0
MS.gene25490.t1 AT1G01010 28.685 251 150 8 18 256 6 239 2.35e-18 86.7
MS.gene25490.t1 AT1G02220 37.795 127 70 4 18 140 6 127 9.20e-17 81.6
MS.gene25490.t1 AT5G50820 36.641 131 71 5 17 144 19 140 8.82e-16 75.9
MS.gene25490.t1 AT3G04430 36.842 133 70 5 21 141 6 136 2.50e-15 74.7
MS.gene25490.t1 AT5G14000 31.579 133 85 3 18 148 18 146 1.25e-14 71.6
MS.gene25490.t1 AT5G14000 27.108 166 103 4 18 181 18 167 1.69e-14 72.4
MS.gene25490.t1 AT3G56530 30.189 159 95 5 17 172 54 199 2.67e-14 73.6
MS.gene25490.t1 AT3G10490 38.202 89 45 3 88 176 2 80 7.19e-14 72.8
MS.gene25490.t1 AT3G10490 38.202 89 45 3 88 176 2 80 7.19e-14 72.8
MS.gene25490.t1 AT5G22290 36.957 92 38 3 94 182 2 76 4.58e-12 65.9

Find 97 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCAATGGATCAATAAT+TGG 0.177383 8.4:-43025836 None:intergenic
CAATAATGGGTATCCTTTAA+TGG 0.214887 8.4:+43026042 MS.gene25490:CDS
TGAAATTGGTAACCGGTATA+AGG 0.232151 8.4:-43025864 None:intergenic
TTCCTATACTTTCTGTCTCT+TGG 0.248179 8.4:-43024645 None:intergenic
GTCTTGTCTACATATTTCTT+TGG 0.251750 8.4:-43024873 None:intergenic
CCAGCTCTTGTTACCCTATT+AGG 0.256540 8.4:-43024678 None:intergenic
TCATGTTTGAGGAACAAAAT+TGG 0.264318 8.4:-43025682 None:intergenic
TTAGGAATGTTAGCCATTAA+AGG 0.266038 8.4:-43026055 None:intergenic
CTTGAAGAGGTTATGCTTCC+AGG 0.267006 8.4:+43023813 MS.gene25490:CDS
AGATCTTGATCATTTGAAAT+TGG 0.267969 8.4:-43025878 None:intergenic
TTACAAGACCATTACAATAA+TGG 0.289925 8.4:+43026028 MS.gene25490:CDS
ATTATAAGATGGAACATCTA+AGG 0.299587 8.4:-43025810 None:intergenic
TACAAGACCATTACAATAAT+GGG 0.299937 8.4:+43026029 MS.gene25490:CDS
GGGTAACAAGAGCTGGGTTT+TGG 0.314918 8.4:+43024685 MS.gene25490:CDS
GGAACAGTGCAAGACCTAAT+AGG 0.315606 8.4:+43024664 MS.gene25490:CDS
TATTCAACTTGTAGGAATCT+TGG 0.319905 8.4:+43025537 MS.gene25490:intron
TCCTATACTTTCTGTCTCTT+GGG 0.324226 8.4:-43024644 None:intergenic
AGGTTATGCTTCCAGGGTTT+AGG 0.326370 8.4:+43023820 MS.gene25490:CDS
GGAAGTCATCAAGTCTTGTT+TGG 0.332787 8.4:+43026173 MS.gene25490:CDS
TTCAGTGTGCCTCTCAATAT+TGG 0.343215 8.4:+43026142 MS.gene25490:CDS
CCAACTGATGAAGAACTTGT+TGG 0.382953 8.4:+43023849 MS.gene25490:CDS
GAACCCTCTGAGGAATAAAT+AGG 0.385421 8.4:-43024729 None:intergenic
GAAATTGGTAACCGGTATAA+GGG 0.389296 8.4:-43025863 None:intergenic
TGTATAGAGTTGGCAAGTAC+AGG 0.404014 8.4:+43024597 MS.gene25490:intron
CTTTGTTAACATCATGTTTG+AGG 0.406276 8.4:-43025693 None:intergenic
TCAGAGGGTTCTAAGTGTAT+TGG 0.407108 8.4:+43024741 MS.gene25490:CDS
AAGAGGTTAAGTGTTGTGTT+AGG 0.408400 8.4:-43025766 None:intergenic
ACACAAGGCACGTTCGCATT+AGG 0.408813 8.4:-43026073 None:intergenic
GAACAGTGCAAGACCTAATA+GGG 0.417579 8.4:+43024665 MS.gene25490:CDS
ATTCAACTTGTAGGAATCTT+GGG 0.422352 8.4:+43025538 MS.gene25490:intron
TACTACCAAGTGTTATACTT+AGG 0.432517 8.4:+43026237 MS.gene25490:CDS
GATCATTTGAAATTGGTAAC+CGG 0.434751 8.4:-43025871 None:intergenic
ACTACCAAGTGTTATACTTA+GGG 0.437461 8.4:+43026238 MS.gene25490:CDS
TCTACCTTTGTAGAAAACTA+AGG 0.437881 8.4:-43024775 None:intergenic
AAGGATACCCATTATTGTAA+TGG 0.438786 8.4:-43026036 None:intergenic
TTGGATACGGTTCGACCCAT+TGG 0.444276 8.4:+43026112 MS.gene25490:CDS
ATAATTGGATTATTATAAGA+TGG 0.450751 8.4:-43025821 None:intergenic
GAAGTCATCAAGTCTTGTTT+GGG 0.460153 8.4:+43026174 MS.gene25490:CDS
GAGGTTGATGTTTCAAGTAA+AGG 0.463138 8.4:-43025629 None:intergenic
CCTAATAGGGTAACAAGAGC+TGG 0.463143 8.4:+43024678 MS.gene25490:CDS
TATAAGGGTTTGTAAATCAA+TGG 0.465297 8.4:-43025848 None:intergenic
ATATGTAGACAAGACCATTC+CGG 0.469723 8.4:+43024881 MS.gene25490:CDS
CCAAAGGAGTCAAAACTGAT+TGG 0.471412 8.4:+43024802 MS.gene25490:CDS
ATATTTATAAATTTGATCCA+TGG 0.478110 8.4:+43023934 MS.gene25490:CDS
GTTGGCAAGTACAGGGGAGA+AGG 0.480074 8.4:+43024605 MS.gene25490:CDS
AAAGAGCTCTCTCTCACTCA+TGG 0.486372 8.4:+43025600 MS.gene25490:CDS
TATTTATAAATTTGATCCAT+GGG 0.487821 8.4:+43023935 MS.gene25490:CDS
CCAACAAGTTCTTCATCAGT+TGG 0.490455 8.4:-43023849 None:intergenic
ATCATTTGTTAGAACATTGG+AGG 0.492381 8.4:-43025648 None:intergenic
TAGGATATGGAAGAGAGAAA+TGG 0.494544 8.4:+43023777 None:intergenic
ATATTGAGAGGCACACTGAA+TGG 0.495510 8.4:-43026139 None:intergenic
ATCATGTAACAAAACTTCAA+TGG 0.495840 8.4:+43025943 MS.gene25490:CDS
TGCATCATTTGTTAGAACAT+TGG 0.496772 8.4:-43025651 None:intergenic
TTTACTTACATTGGCCGGAA+TGG 0.497789 8.4:-43024895 None:intergenic
TGATTTACAAACCCTTATAC+CGG 0.505584 8.4:+43025852 MS.gene25490:CDS
TATTGAGAGGCACACTGAAT+GGG 0.507464 8.4:-43026138 None:intergenic
CTAGAGTGACTTGCAAAGCT+AGG 0.507948 8.4:-43025719 None:intergenic
GTCTTACTTGGTAGATCCCA+TGG 0.514805 8.4:-43023951 None:intergenic
AGGAATCTTGGGCAATATGC+AGG 0.518840 8.4:+43025549 MS.gene25490:intron
AGCTCTTTGAGCTGTAGCAT+TGG 0.520084 8.4:-43025585 None:intergenic
TTGAAGAGGTTATGCTTCCA+GGG 0.523265 8.4:+43023814 MS.gene25490:CDS
AGTGTTGTGTTAGGTTATTG+TGG 0.533214 8.4:-43025757 None:intergenic
TGTTGATGATCAACAAGAGT+TGG 0.538475 8.4:+43026093 MS.gene25490:CDS
TTGAGGAACAAAATTGGTTG+TGG 0.548581 8.4:-43025676 None:intergenic
GATGATGAATCTATGAGAGA+AGG 0.549029 8.4:-43024846 None:intergenic
TTGTTACATGATGTTTCAAG+AGG 0.556658 8.4:-43025932 None:intergenic
AGACCTATTTATTCCTCAGA+GGG 0.557263 8.4:+43024726 MS.gene25490:CDS
CAAGATCTTAACCTTAGCAC+TGG 0.557408 8.4:+43025893 MS.gene25490:CDS
ACACTGAATGGGAATCCAAT+GGG 0.562023 8.4:-43026127 None:intergenic
GTTGATGTTTCAAGTAAAGG+TGG 0.562150 8.4:-43025626 None:intergenic
GCCCAAGAGACAGAAAGTAT+AGG 0.565854 8.4:+43024643 MS.gene25490:CDS
AAGTGTAGTACTACTAGAAG+AGG 0.565912 8.4:-43025783 None:intergenic
GTATAGAGTTGGCAAGTACA+GGG 0.573043 8.4:+43024598 MS.gene25490:intron
AAGAGCTCTCTCTCACTCAT+GGG 0.573676 8.4:+43025601 MS.gene25490:CDS
TTATAAGATGGAACATCTAA+GGG 0.574187 8.4:-43025809 None:intergenic
GGGTTCATCAGAAGTACAAG+AGG 0.581707 8.4:-43026203 None:intergenic
CACACTGAATGGGAATCCAA+TGG 0.582826 8.4:-43026128 None:intergenic
TGATCAACAAGAGTTGGATA+CGG 0.594638 8.4:+43026099 MS.gene25490:CDS
GTAACAACTTCAAACTACAT+TGG 0.595345 8.4:+43026001 MS.gene25490:CDS
CAAGTACAGGGGAGAAGGAG+TGG 0.600593 8.4:+43024610 MS.gene25490:CDS
CTAATAGGGTAACAAGAGCT+GGG 0.601926 8.4:+43024679 MS.gene25490:CDS
AAAATACTAAGCCAGTGCTA+AGG 0.602217 8.4:-43025904 None:intergenic
CAGACCTATTTATTCCTCAG+AGG 0.608250 8.4:+43024725 MS.gene25490:CDS
TTGATGTTTCAAGTAAAGGT+GGG 0.610295 8.4:-43025625 None:intergenic
CTCTCAATATTGGTGATGCA+TGG 0.610941 8.4:+43026152 MS.gene25490:CDS
GTTGGATGAAACCTAAACCC+TGG 0.628808 8.4:-43023831 None:intergenic
CATGCATCACCAATATTGAG+AGG 0.634336 8.4:-43026151 None:intergenic
TTGATGAGCTCAATAGCAAG+AGG 0.641698 8.4:-43023903 None:intergenic
TACTTGTGAGAAACTTGAAG+AGG 0.650571 8.4:+43023800 MS.gene25490:CDS
CTTGGTAGTAGAATAACTAG+AGG 0.660558 8.4:-43026224 None:intergenic
TACAAAGGTAGAGCTGCCAA+AGG 0.667663 8.4:+43024786 MS.gene25490:CDS
TAAACCCTAAGTATAACACT+TGG 0.675221 8.4:-43026242 None:intergenic
TGATGAGCTCAATAGCAAGA+GGG 0.682356 8.4:-43023902 None:intergenic
TATAGAGTTGGCAAGTACAG+GGG 0.692122 8.4:+43024599 MS.gene25490:intron
TTGGTAGTAGAATAACTAGA+GGG 0.705649 8.4:-43026223 None:intergenic
TCTTGTTGATCATCAACACA+AGG 0.713761 8.4:-43026088 None:intergenic
AATACACTTAGAACCCTCTG+AGG 0.742862 8.4:-43024739 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGATATATAAGAAATTA+GGG + chr8.4:43025307-43025326 MS.gene25490:intron 10.0%
!!! CATTTGATTTTTTTTTTTTT+TGG + chr8.4:43025406-43025425 MS.gene25490:intron 10.0%
!! ATAATTGGATTATTATAAGA+TGG - chr8.4:43025824-43025843 None:intergenic 15.0%
!! ATATTTATAAATTTGATCCA+TGG + chr8.4:43023934-43023953 MS.gene25490:CDS 15.0%
!! GAATAGATATATAAGAAATT+AGG + chr8.4:43025306-43025325 MS.gene25490:intron 15.0%
!! TATTTATAAATTTGATCCAT+GGG + chr8.4:43023935-43023954 MS.gene25490:CDS 15.0%
!! TTCAAACTAAATATAGATTT+GGG - chr8.4:43024929-43024948 None:intergenic 15.0%
!!! CATATACTTTTTTTTTAACA+TGG - chr8.4:43025009-43025028 None:intergenic 15.0%
!!! GTAATTATTTTTTTAACAAG+TGG - chr8.4:43025456-43025475 None:intergenic 15.0%
!! GTTCAAACTAAATATAGATT+TGG - chr8.4:43024930-43024949 None:intergenic 20.0%
!! TAAAAAGTAAAGTGATAAAG+AGG - chr8.4:43024058-43024077 None:intergenic 20.0%
!! TAAATCAATGGATCAATAAT+TGG - chr8.4:43025839-43025858 None:intergenic 20.0%
!!! GAAGTAAATTTTACTTACAT+TGG - chr8.4:43024907-43024926 None:intergenic 20.0%
!!! TATATTTAGTTTGAACTTGT+TGG + chr8.4:43024934-43024953 MS.gene25490:intron 20.0%
!!! TTTTATAGATCTTGTTAGAA+TGG + chr8.4:43024962-43024981 MS.gene25490:intron 20.0%
! ATCAGTAAAGTTATGGTATT+TGG + chr8.4:43025115-43025134 MS.gene25490:intron 25.0%
! ATCATGTAACAAAACTTCAA+TGG + chr8.4:43025943-43025962 MS.gene25490:CDS 25.0%
! ATGAGTAATCAGTAAAGTTA+TGG + chr8.4:43025108-43025127 MS.gene25490:intron 25.0%
! ATTATAAGATGGAACATCTA+AGG - chr8.4:43025813-43025832 None:intergenic 25.0%
! CATTTGACAAATAATCAAGT+AGG + chr8.4:43025073-43025092 MS.gene25490:intron 25.0%
! GTTATGGTATTTGGATTATT+TGG + chr8.4:43025124-43025143 MS.gene25490:intron 25.0%
! TACAAGACCATTACAATAAT+GGG + chr8.4:43026029-43026048 MS.gene25490:CDS 25.0%
! TATAAGGGTTTGTAAATCAA+TGG - chr8.4:43025851-43025870 None:intergenic 25.0%
! TATATGTAAGTTACACATCT+AGG - chr8.4:43024124-43024143 None:intergenic 25.0%
! TCAAATAAATCAATCGAAAG+AGG - chr8.4:43024154-43024173 None:intergenic 25.0%
! TTAAATGCTATTCAACTTGT+AGG + chr8.4:43025529-43025548 MS.gene25490:intron 25.0%
! TTACAAGACCATTACAATAA+TGG + chr8.4:43026028-43026047 MS.gene25490:CDS 25.0%
! TTATAAGATGGAACATCTAA+GGG - chr8.4:43025812-43025831 None:intergenic 25.0%
!! AGATCTTGATCATTTGAAAT+TGG - chr8.4:43025881-43025900 None:intergenic 25.0%
!! GTTAAGACTTTTTGATATCT+TGG + chr8.4:43024536-43024555 MS.gene25490:intron 25.0%
!! TAAATTTTACTTACATTGGC+CGG - chr8.4:43024903-43024922 None:intergenic 25.0%
!! TATCACATCACTCTATTTTA+AGG - chr8.4:43025229-43025248 None:intergenic 25.0%
!! TGATATTTTGTGTATAGAGT+TGG + chr8.4:43024587-43024606 MS.gene25490:intron 25.0%
!!! AAATCCTTAGTTTTCTACAA+AGG + chr8.4:43024771-43024790 MS.gene25490:CDS 25.0%
!!! ATCACATCACTCTATTTTAA+GGG - chr8.4:43025228-43025247 None:intergenic 25.0%
!!! GATTTTTCTTCTTTGCTATT+AGG + chr8.4:43025965-43025984 MS.gene25490:CDS 25.0%
AAGGATACCCATTATTGTAA+TGG - chr8.4:43026039-43026058 None:intergenic 30.0%
ACAATTTCTGACATGTACAT+AGG + chr8.4:43024226-43024245 MS.gene25490:intron 30.0%
ATTCAACTTGTAGGAATCTT+GGG + chr8.4:43025538-43025557 MS.gene25490:intron 30.0%
CTTTGTTAACATCATGTTTG+AGG - chr8.4:43025696-43025715 None:intergenic 30.0%
GTAACAACTTCAAACTACAT+TGG + chr8.4:43026001-43026020 MS.gene25490:CDS 30.0%
GTCTTGTCTACATATTTCTT+TGG - chr8.4:43024876-43024895 None:intergenic 30.0%
TAACCTAAAATGCACTTAGT+CGG + chr8.4:43025149-43025168 MS.gene25490:intron 30.0%
TATTCAACTTGTAGGAATCT+TGG + chr8.4:43025537-43025556 MS.gene25490:intron 30.0%
TCATGTTTGAGGAACAAAAT+TGG - chr8.4:43025685-43025704 None:intergenic 30.0%
TCATTTGACCAGAAAACAAT+CGG - chr8.4:43025379-43025398 None:intergenic 30.0%
TCTACCTTTGTAGAAAACTA+AGG - chr8.4:43024778-43024797 None:intergenic 30.0%
TGATTTACAAACCCTTATAC+CGG + chr8.4:43025852-43025871 MS.gene25490:CDS 30.0%
TTAGGAATGTTAGCCATTAA+AGG - chr8.4:43026058-43026077 None:intergenic 30.0%
TTATCCAAACATCGTACTAT+AGG + chr8.4:43024504-43024523 MS.gene25490:intron 30.0%
TTGTTACATGATGTTTCAAG+AGG - chr8.4:43025935-43025954 None:intergenic 30.0%
! ATCATTTGTTAGAACATTGG+AGG - chr8.4:43025651-43025670 None:intergenic 30.0%
! GATCATTTGAAATTGGTAAC+CGG - chr8.4:43025874-43025893 None:intergenic 30.0%
! TGCATCATTTGTTAGAACAT+TGG - chr8.4:43025654-43025673 None:intergenic 30.0%
! TTGATGTTTCAAGTAAAGGT+GGG - chr8.4:43025628-43025647 None:intergenic 30.0%
! TTGGTAGTAGAATAACTAGA+GGG - chr8.4:43026226-43026245 None:intergenic 30.0%
!! CAATAATGGGTATCCTTTAA+TGG + chr8.4:43026042-43026061 MS.gene25490:CDS 30.0%
!!! GTTGCTGAATTTTTTTCTTC+AGG - chr8.4:43023881-43023900 None:intergenic 30.0%
!!! TTCATTTTGAAGTGTTTGAC+TGG + chr8.4:43025500-43025519 MS.gene25490:intron 30.0%
AAAATACTAAGCCAGTGCTA+AGG - chr8.4:43025907-43025926 None:intergenic 35.0%
AAGTGTAGTACTACTAGAAG+AGG - chr8.4:43025786-43025805 None:intergenic 35.0%
AATATAAGGTTCGCTTGATG+TGG - chr8.4:43024096-43024115 None:intergenic 35.0%
ACATCTAGGTAGGGAATATA+AGG - chr8.4:43024110-43024129 None:intergenic 35.0%
ACTACCTATAGTACGATGTT+TGG - chr8.4:43024511-43024530 None:intergenic 35.0%
AGACCTATTTATTCCTCAGA+GGG + chr8.4:43024726-43024745 MS.gene25490:CDS 35.0%
AGTGTTGTGTTAGGTTATTG+TGG - chr8.4:43025760-43025779 None:intergenic 35.0%
ATATGTAGACAAGACCATTC+CGG + chr8.4:43024881-43024900 MS.gene25490:CDS 35.0%
CATTTGACCAGAAAACAATC+GGG - chr8.4:43025378-43025397 None:intergenic 35.0%
GATGATGAATCTATGAGAGA+AGG - chr8.4:43024849-43024868 None:intergenic 35.0%
GCACTATTATGAGTCTTACT+TGG - chr8.4:43023966-43023985 None:intergenic 35.0%
GTAAGTTACACATCTAGGTA+GGG - chr8.4:43024119-43024138 None:intergenic 35.0%
GTCAGTGATAAACACATCTA+GGG - chr8.4:43024007-43024026 None:intergenic 35.0%
GTGATAAAGAGGTCAAATAC+TGG - chr8.4:43024047-43024066 None:intergenic 35.0%
TACTTGTGAGAAACTTGAAG+AGG + chr8.4:43023800-43023819 MS.gene25490:CDS 35.0%
TCCTATACTTTCTGTCTCTT+GGG - chr8.4:43024647-43024666 None:intergenic 35.0%
TCTTGTTGATCATCAACACA+AGG - chr8.4:43026091-43026110 None:intergenic 35.0%
TGATCAACAAGAGTTGGATA+CGG + chr8.4:43026099-43026118 MS.gene25490:CDS 35.0%
TGTAAGTTACACATCTAGGT+AGG - chr8.4:43024120-43024139 None:intergenic 35.0%
TGTCAGTGATAAACACATCT+AGG - chr8.4:43024008-43024027 None:intergenic 35.0%
TTCCTATACTTTCTGTCTCT+TGG - chr8.4:43024648-43024667 None:intergenic 35.0%
TTGAGGAACAAAATTGGTTG+TGG - chr8.4:43025679-43025698 None:intergenic 35.0%
! AAAATGACCCGATTGTTTTC+TGG + chr8.4:43025368-43025387 MS.gene25490:intron 35.0%
! AAGAGGTTAAGTGTTGTGTT+AGG - chr8.4:43025769-43025788 None:intergenic 35.0%
! AATCCGACTAAGTGCATTTT+AGG - chr8.4:43025155-43025174 None:intergenic 35.0%
! AGAAAACAATCGGGTCATTT+TGG - chr8.4:43025369-43025388 None:intergenic 35.0%
! CTTGGTAGTAGAATAACTAG+AGG - chr8.4:43026227-43026246 None:intergenic 35.0%
! GAAATTGGTAACCGGTATAA+GGG - chr8.4:43025866-43025885 None:intergenic 35.0%
! GTTGATGTTTCAAGTAAAGG+TGG - chr8.4:43025629-43025648 None:intergenic 35.0%
! TGAAATTGGTAACCGGTATA+AGG - chr8.4:43025867-43025886 None:intergenic 35.0%
!! GAAGTCATCAAGTCTTGTTT+GGG + chr8.4:43026174-43026193 MS.gene25490:CDS 35.0%
!! GAGGTTGATGTTTCAAGTAA+AGG - chr8.4:43025632-43025651 None:intergenic 35.0%
!! TGTTGATGATCAACAAGAGT+TGG + chr8.4:43026093-43026112 MS.gene25490:CDS 35.0%
AATACACTTAGAACCCTCTG+AGG - chr8.4:43024742-43024761 None:intergenic 40.0%
ACACTGAATGGGAATCCAAT+GGG - chr8.4:43026130-43026149 None:intergenic 40.0%
CAAGATCTTAACCTTAGCAC+TGG + chr8.4:43025893-43025912 MS.gene25490:CDS 40.0%
CAGACCTATTTATTCCTCAG+AGG + chr8.4:43024725-43024744 MS.gene25490:CDS 40.0%
CATGCATCACCAATATTGAG+AGG - chr8.4:43026154-43026173 None:intergenic 40.0%
CCAAAGGAGTCAAAACTGAT+TGG + chr8.4:43024802-43024821 MS.gene25490:CDS 40.0%
CCAACAAGTTCTTCATCAGT+TGG - chr8.4:43023852-43023871 None:intergenic 40.0%
CCAACTGATGAAGAACTTGT+TGG + chr8.4:43023849-43023868 MS.gene25490:CDS 40.0%
CTAATAGGGTAACAAGAGCT+GGG + chr8.4:43024679-43024698 MS.gene25490:CDS 40.0%
GAACAGTGCAAGACCTAATA+GGG + chr8.4:43024665-43024684 MS.gene25490:CDS 40.0%
GTATAGAGTTGGCAAGTACA+GGG + chr8.4:43024598-43024617 MS.gene25490:intron 40.0%
TATAGAGTTGGCAAGTACAG+GGG + chr8.4:43024599-43024618 MS.gene25490:intron 40.0%
TGATGAGCTCAATAGCAAGA+GGG - chr8.4:43023905-43023924 None:intergenic 40.0%
TGTATAGAGTTGGCAAGTAC+AGG + chr8.4:43024597-43024616 MS.gene25490:intron 40.0%
TTCAGTGTGCCTCTCAATAT+TGG + chr8.4:43026142-43026161 MS.gene25490:CDS 40.0%
TTGAAGAGGTTATGCTTCCA+GGG + chr8.4:43023814-43023833 MS.gene25490:CDS 40.0%
TTGATGAGCTCAATAGCAAG+AGG - chr8.4:43023906-43023925 None:intergenic 40.0%
TTTACTTACATTGGCCGGAA+TGG - chr8.4:43024898-43024917 None:intergenic 40.0%
! ATATTGAGAGGCACACTGAA+TGG - chr8.4:43026142-43026161 None:intergenic 40.0%
! GAACCCTCTGAGGAATAAAT+AGG - chr8.4:43024732-43024751 None:intergenic 40.0%
! TATTGAGAGGCACACTGAAT+GGG - chr8.4:43026141-43026160 None:intergenic 40.0%
! TTTTTGTGTGCACCACATGT+GGG + chr8.4:43025194-43025213 MS.gene25490:intron 40.0%
!! ACAATCGGGTCATTTTGGAT+CGG - chr8.4:43025364-43025383 None:intergenic 40.0%
!! CTCTCAATATTGGTGATGCA+TGG + chr8.4:43026152-43026171 MS.gene25490:CDS 40.0%
!! GGAAGTCATCAAGTCTTGTT+TGG + chr8.4:43026173-43026192 MS.gene25490:CDS 40.0%
!! TCAGAGGGTTCTAAGTGTAT+TGG + chr8.4:43024741-43024760 MS.gene25490:CDS 40.0%
!!! CCAATCAGTTTTGACTCCTT+TGG - chr8.4:43024805-43024824 None:intergenic 40.0%
!!! TTTTTTGTGTGCACCACATG+TGG + chr8.4:43025193-43025212 MS.gene25490:intron 40.0%
AAAGAGCTCTCTCTCACTCA+TGG + chr8.4:43025600-43025619 MS.gene25490:CDS 45.0%
AAGAGCTCTCTCTCACTCAT+GGG + chr8.4:43025601-43025620 MS.gene25490:CDS 45.0%
AGCTCTTTGAGCTGTAGCAT+TGG - chr8.4:43025588-43025607 None:intergenic 45.0%
AGGAATCTTGGGCAATATGC+AGG + chr8.4:43025549-43025568 MS.gene25490:intron 45.0%
AGGTTATGCTTCCAGGGTTT+AGG + chr8.4:43023820-43023839 MS.gene25490:CDS 45.0%
CACACTGAATGGGAATCCAA+TGG - chr8.4:43026131-43026150 None:intergenic 45.0%
CCAGCTCTTGTTACCCTATT+AGG - chr8.4:43024681-43024700 None:intergenic 45.0%
CCTAATAGGGTAACAAGAGC+TGG + chr8.4:43024678-43024697 MS.gene25490:CDS 45.0%
CTTGAAGAGGTTATGCTTCC+AGG + chr8.4:43023813-43023832 MS.gene25490:CDS 45.0%
GGAACAGTGCAAGACCTAAT+AGG + chr8.4:43024664-43024683 MS.gene25490:CDS 45.0%
GTCTTACTTGGTAGATCCCA+TGG - chr8.4:43023954-43023973 None:intergenic 45.0%
GTTGGATGAAACCTAAACCC+TGG - chr8.4:43023834-43023853 None:intergenic 45.0%
TACAAAGGTAGAGCTGCCAA+AGG + chr8.4:43024786-43024805 MS.gene25490:CDS 45.0%
! CTAGAGTGACTTGCAAAGCT+AGG - chr8.4:43025722-43025741 None:intergenic 45.0%
! GCCCAAGAGACAGAAAGTAT+AGG + chr8.4:43024643-43024662 MS.gene25490:CDS 45.0%
! GGGTTCATCAGAAGTACAAG+AGG - chr8.4:43026206-43026225 None:intergenic 45.0%
ACACAAGGCACGTTCGCATT+AGG - chr8.4:43026076-43026095 None:intergenic 50.0%
TGCACTTAGTCGGATTGAGC+TGG + chr8.4:43025159-43025178 MS.gene25490:intron 50.0%
TTGGATACGGTTCGACCCAT+TGG + chr8.4:43026112-43026131 MS.gene25490:CDS 50.0%
! GGGTAACAAGAGCTGGGTTT+TGG + chr8.4:43024685-43024704 MS.gene25490:CDS 50.0%
!!! GCTGGGTTTTGGAAAGCAAC+AGG + chr8.4:43024696-43024715 MS.gene25490:CDS 50.0%
AGGGTGTAGACACCCACATG+TGG - chr8.4:43025209-43025228 None:intergenic 55.0%
CAAGTACAGGGGAGAAGGAG+TGG + chr8.4:43024610-43024629 MS.gene25490:CDS 55.0%
GTTGGCAAGTACAGGGGAGA+AGG + chr8.4:43024605-43024624 MS.gene25490:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 43023783 43026258 43023783 ID=MS.gene25490
chr8.4 mRNA 43023783 43026258 43023783 ID=MS.gene25490.t1;Parent=MS.gene25490
chr8.4 exon 43023783 43023966 43023783 ID=MS.gene25490.t1.exon1;Parent=MS.gene25490.t1
chr8.4 CDS 43023783 43023966 43023783 ID=cds.MS.gene25490.t1;Parent=MS.gene25490.t1
chr8.4 exon 43024604 43024908 43024604 ID=MS.gene25490.t1.exon2;Parent=MS.gene25490.t1
chr8.4 CDS 43024604 43024908 43024604 ID=cds.MS.gene25490.t1;Parent=MS.gene25490.t1
chr8.4 exon 43025551 43026258 43025551 ID=MS.gene25490.t1.exon3;Parent=MS.gene25490.t1
chr8.4 CDS 43025551 43026258 43025551 ID=cds.MS.gene25490.t1;Parent=MS.gene25490.t1
Gene Sequence

>MS.gene25490

ATGGAAGAGAGAAATGGTACTTGTGAGAAACTTGAAGAGGTTATGCTTCCAGGGTTTAGGTTTCATCCAACTGATGAAGAACTTGTTGGATTTTACCTGAAGAAAAAAATTCAGCAACGCCCTCTTGCTATTGAGCTCATCAAGCAGCTTGATATTTATAAATTTGATCCATGGGATCTACCAAGTAAGACTCATAATAGTGCTTTACTAATACATTATTACCCTAGATGTGTTTATCACTGACACATGAAATGTTAGTATCCAGTATTTGACCTCTTTATCACTTTACTTTTTAACTCTCTCAGATCAACCACATCAAGCGAACCTTATATTCCCTACCTAGATGTGTAACTTACATATATTTAGAGCCTCTTTCGATTGATTTATTTGAGTTTATTTAGTAGTATAAACACTTATGAAACTATTTAGAAGAGCTTGTGAAAACAATTTCTGACATGTACATAGGTTATTTTAAGCTAATTTACATAAACTCTTTTTGATAGCTAAACAGTTTATAGCTTATACGAAAATTGTTTGATTTTATTATATCTTTTGTTATCAAGAAAAAATTATGCAAAAGTGTTATGCTATATATATTGCTTGTTTTTTGAGTTCTTTTTCTATTTGTTGCTCTTGTATTTTGATCTCTTTTTATATAATATATTTGTCATTCAAAAAAAAAATCACAAGTATTTATGCTACAAACGCTTAATTAAATTGTTTATCCAAACATCGTACTATAGGTAGTTTTTTGTTAAGACTTTTTGATATCTTGGTACTAATTAAAAATTAATTCTATAGCTCTGATATTTTGTGTATAGAGTTGGCAAGTACAGGGGAGAAGGAGTGGTATTTCTATTGCCCAAGAGACAGAAAGTATAGGAACAGTGCAAGACCTAATAGGGTAACAAGAGCTGGGTTTTGGAAAGCAACAGGAACAGACAGACCTATTTATTCCTCAGAGGGTTCTAAGTGTATTGGCTTGAAAAAATCCTTAGTTTTCTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCATAGATTCATCATCATCTCCAAAGAAATATGTAGACAAGACCATTCCGGCCAATGTAAGTAAAATTTACTTCCCAAATCTATATTTAGTTTGAACTTGTTGGTATCATTTTATAGATCTTGTTAGAATGGATATTAAGTATATGTTTAGAGCCATGTTAAAAAAAAAGTATATGTTTAGAGCATAATAAAATATAAAAATATATATAAAATTGTGACACATTTGACAAATAATCAAGTAGGTTATAGTATAAGATGAGTAATCAGTAAAGTTATGGTATTTGGATTATTTGGTCTAACCTAAAATGCACTTAGTCGGATTGAGCTGGACTAAGCTTAATTTTTTGTGTGCACCACATGTGGGTGTCTACACCCTTAAAATAGAGTGATGTGATAAATATGATAATTTGATGATATGACAGAAAGTAAGAGATATAGATAAAATGAGATGTTGAATAGATATATAAGAAATTAGGGTTAAAAAATATACTTAATATGATCAAACGTGCCGATCCAAAATGACCCGATTGTTTTCTGGTCAAATGATATGATACATTTGATTTTTTTTTTTTTTGGTTACTGATACATTTGATTTGAGTTCCACTTGTTAAAAAAATAATTACATTATATTATATTCTATATATAACTTCATTTTGAAGTGTTTGACTGGCTAATATTAAATGCTATTCAACTTGTAGGAATCTTGGGCAATATGCAGGATATTCAAGAAAACCAATGCTACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCCCACCTTTACTTGAAACATCAACCTCCAATGTTCTAACAAATGATGCAAACCACAACCAATTTTGTTCCTCAAACATGATGTTAACAAAGAAACCTAGCTTTGCAAGTCACTCTAGTACTACTACTAATAACCACAATAACCTAACACAACACTTAACCTCTTCTAGTAGTACTACACTTTGTCCCTTAGATGTTCCATCTTATAATAATCCAATTATTGATCCATTGATTTACAAACCCTTATACCGGTTACCAATTTCAAATGATCAAGATCTTAACCTTAGCACTGGCTTAGTATTTTCATCTCCTCTTGAAACATCATGTAACAAAACTTCAATGGATTTTTCTTCTTTGCTATTAGGTATGTCATCTGAAGTAACAACTTCAAACTACATTGGTAATTTACAAGACCATTACAATAATGGGTATCCTTTAATGGCTAACATTCCTAATGCGAACGTGCCTTGTGTTGATGATCAACAAGAGTTGGATACGGTTCGACCCATTGGATTCCCATTCAGTGTGCCTCTCAATATTGGTGATGCATGGAAGTCATCAAGTCTTGTTTGGGATACTTCCTCTTGTACTTCTGATGAACCCTCTAGTTATTCTACTACCAAGTGTTATACTTAG
Protein sequence

>MS.gene25490.t1

MEERNGTCEKLEEVMLPGFRFHPTDEELVGFYLKKKIQQRPLAIELIKQLDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLIDSSSSPKKYVDKTIPANESWAICRIFKKTNATAQRALSHSWVPPLLETSTSNVLTNDANHNQFCSSNMMLTKKPSFASHSSTTTNNHNNLTQHLTSSSSTTLCPLDVPSYNNPIIDPLIYKPLYRLPISNDQDLNLSTGLVFSSPLETSCNKTSMDFSSLLLGMSSEVTTSNYIGNLQDHYNNGYPLMANIPNANVPCVDDQQELDTVRPIGFPFSVPLNIGDAWKSSSLVWDTSSCTSDEPSSYSTTKCYT