AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25971

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25971.t1 MTR_3g077650 98.039 357 6 1 1 356 91 447 0.0 731
MS.gene25971.t1 MTR_4g105660 58.065 341 126 7 1 335 93 422 1.64e-130 380
MS.gene25971.t1 MTR_5g049190 57.986 288 70 8 57 339 1 242 9.36e-108 315
MS.gene25971.t1 MTR_4g088015 71.756 131 37 0 84 214 215 345 6.70e-60 199
MS.gene25971.t1 MTR_7g037260 70.866 127 37 0 84 210 139 265 1.98e-59 196
MS.gene25971.t1 MTR_3g463400 53.723 188 76 3 36 213 75 261 1.14e-58 196
MS.gene25971.t1 MTR_7g451170 73.228 127 34 0 84 210 185 311 2.77e-58 194
MS.gene25971.t1 MTR_5g070020 61.379 145 48 2 75 212 108 251 2.23e-56 187
MS.gene25971.t1 MTR_7g037130 66.142 127 43 0 84 210 139 265 1.37e-53 181
MS.gene25971.t1 MTR_7g035350 53.205 156 72 1 83 237 218 373 2.76e-48 169
MS.gene25971.t1 MTR_7g450950 58.696 138 55 2 80 215 147 284 1.43e-47 164
MS.gene25971.t1 MTR_1g057980 44.131 213 108 4 26 237 17 219 2.97e-47 162
MS.gene25971.t1 MTR_7g061330 64.078 103 37 0 88 190 111 213 8.11e-41 151
MS.gene25971.t1 MTR_7g461410 64.078 103 37 0 88 190 111 213 8.11e-41 151
MS.gene25971.t1 MTR_7g061330 59.649 114 46 0 88 201 75 188 1.19e-40 150
MS.gene25971.t1 MTR_1g026870 58.252 103 43 0 88 190 83 185 4.82e-39 148
MS.gene25971.t1 MTR_3g110028 59.223 103 42 0 88 190 83 185 1.01e-38 147
MS.gene25971.t1 MTR_5g010650 57.143 98 42 0 87 184 107 204 3.00e-35 134
MS.gene25971.t1 MTR_4g094982 53.704 108 50 0 89 196 4 111 1.67e-34 128
MS.gene25971.t1 MTR_5g016510 52.885 104 49 0 89 192 4 107 1.67e-33 126
MS.gene25971.t1 MTR_3g101290 39.869 153 90 1 83 235 30 180 2.23e-33 124
MS.gene25971.t1 MTR_4g019370 53.922 102 47 0 89 190 37 138 3.77e-33 126
MS.gene25971.t1 MTR_5g082910 53.061 98 46 0 89 186 18 115 1.49e-30 118
MS.gene25971.t1 MTR_6g015455 49.038 104 53 0 89 192 4 107 5.12e-29 119
MS.gene25971.t1 MTR_3g052450 46.610 118 58 3 85 200 37 151 3.32e-28 115
MS.gene25971.t1 MTR_6g027340 47.525 101 53 0 90 190 16 116 1.28e-27 108
MS.gene25971.t1 MTR_4g100720 47.321 112 56 2 75 185 2 111 2.23e-27 106
MS.gene25971.t1 MTR_3g052430 46.552 116 57 3 87 200 40 152 2.51e-27 112
MS.gene25971.t1 MTR_5g079670 47.059 119 58 3 77 193 2 117 2.75e-27 107
MS.gene25971.t1 MTR_6g074860 44.800 125 67 1 90 214 4 126 5.02e-27 107
MS.gene25971.t1 MTR_2g089450 35.023 217 113 8 90 287 14 221 8.86e-27 107
MS.gene25971.t1 MTR_4g082040 43.548 124 68 1 90 213 105 226 1.24e-26 110
MS.gene25971.t1 MTR_5g041570 40.136 147 84 2 73 219 117 259 1.26e-26 110
MS.gene25971.t1 MTR_2g011660 48.039 102 52 1 90 190 15 116 1.95e-26 108
MS.gene25971.t1 MTR_6g027360 47.525 101 53 0 90 190 78 178 2.41e-26 107
MS.gene25971.t1 MTR_2g089620 48.039 102 52 1 90 190 14 115 3.78e-26 107
MS.gene25971.t1 MTR_5g062790 39.597 149 78 4 90 228 11 157 4.04e-26 106
MS.gene25971.t1 MTR_3g461490 44.545 110 60 1 84 192 8 117 4.24e-26 106
MS.gene25971.t1 MTR_5g007370 47.573 103 51 2 90 190 14 115 5.06e-26 105
MS.gene25971.t1 MTR_8g042410 37.415 147 82 3 62 207 18 155 6.63e-26 108
MS.gene25971.t1 MTR_8g027345 47.059 102 53 1 85 185 9 110 7.41e-26 105
MS.gene25971.t1 MTR_4g073420 49.533 107 51 2 90 194 14 119 8.95e-26 105
MS.gene25971.t1 MTR_5g029840 43.636 110 61 1 85 193 9 118 1.00e-25 105
MS.gene25971.t1 MTR_3g011610 43.443 122 64 3 82 201 31 149 1.14e-25 108
MS.gene25971.t1 MTR_1g112760 43.925 107 57 2 90 194 15 120 1.57e-25 103
MS.gene25971.t1 MTR_2g089420 34.694 196 109 6 90 280 13 194 1.66e-25 107
MS.gene25971.t1 MTR_8g020490 47.170 106 55 1 90 194 10 115 1.97e-25 103
MS.gene25971.t1 MTR_7g086960 43.651 126 71 0 90 215 89 214 1.99e-25 105
MS.gene25971.t1 MTR_3g077110 43.925 107 57 2 90 194 14 119 2.40e-25 105
MS.gene25971.t1 MTR_0008s0390 41.026 117 65 3 76 190 2 116 2.74e-25 103
MS.gene25971.t1 MTR_4g091490 47.059 102 53 1 90 190 15 116 2.87e-25 105
MS.gene25971.t1 MTR_4g125520 29.876 241 138 7 77 301 3 228 3.37e-25 103
MS.gene25971.t1 MTR_6g009430 42.727 110 62 1 85 193 9 118 3.43e-25 104
MS.gene25971.t1 MTR_3g097450 46.667 120 58 4 77 193 3 119 3.54e-25 103
MS.gene25971.t1 MTR_1g043050 33.880 183 108 3 90 269 14 186 4.13e-25 102
MS.gene25971.t1 MTR_4g478180 47.573 103 51 2 90 190 15 116 4.19e-25 104
MS.gene25971.t1 MTR_4g485530 42.857 119 66 2 77 194 2 119 4.26e-25 100
MS.gene25971.t1 MTR_5g078140 44.144 111 59 2 85 193 9 118 4.41e-25 103
MS.gene25971.t1 MTR_4g121460 44.444 108 59 1 84 190 8 115 5.20e-25 103
MS.gene25971.t1 MTR_1g043080 45.098 102 55 1 90 190 14 115 5.55e-25 102
MS.gene25971.t1 MTR_3g089045 47.368 114 57 1 90 200 16 129 6.11e-25 102
MS.gene25971.t1 MTR_4g105130 39.683 126 74 2 90 214 14 138 6.17e-25 104
MS.gene25971.t1 MTR_8g095390 43.802 121 62 4 76 193 2 119 7.27e-25 103
MS.gene25971.t1 MTR_4g102380 43.243 111 60 2 85 193 9 118 8.28e-25 102
MS.gene25971.t1 MTR_7g117730 46.078 102 54 1 85 185 9 110 8.51e-25 101
MS.gene25971.t1 MTR_1g110460 43.137 102 57 1 90 190 28 129 8.83e-25 102
MS.gene25971.t1 MTR_1g045610 30.213 235 123 7 90 296 23 244 1.25e-24 101
MS.gene25971.t1 MTR_3g065440 43.243 111 60 2 85 193 9 118 1.36e-24 102
MS.gene25971.t1 MTR_1g085040 44.660 103 54 2 90 190 14 115 1.48e-24 103
MS.gene25971.t1 MTR_0008s0470 41.176 102 59 1 90 190 15 116 1.49e-24 102
MS.gene25971.t1 MTR_5g088080 44.737 114 59 3 90 201 14 125 1.66e-24 101
MS.gene25971.t1 MTR_5g088150 44.737 114 59 3 90 201 14 125 1.66e-24 101
MS.gene25971.t1 MTR_5g488210 44.737 114 59 3 90 201 14 125 1.66e-24 101
MS.gene25971.t1 MTR_3g028740 43.443 122 61 2 77 190 4 125 1.80e-24 102
MS.gene25971.t1 MTR_5g088640 44.737 114 59 3 90 201 14 125 1.93e-24 101
MS.gene25971.t1 MTR_5g088610 43.860 114 60 3 90 201 11 122 2.01e-24 102
MS.gene25971.t1 MTR_2g097910 45.098 102 55 1 90 190 22 123 2.31e-24 102
MS.gene25971.t1 MTR_2g064160 43.636 110 57 3 83 190 8 114 2.49e-24 101
MS.gene25971.t1 MTR_7g096930 44.660 103 56 1 84 185 8 110 2.94e-24 100
MS.gene25971.t1 MTR_0251s0050 39.655 116 68 2 76 190 2 116 3.02e-24 100
MS.gene25971.t1 MTR_5g488170 44.737 114 59 3 90 201 14 125 3.38e-24 99.8
MS.gene25971.t1 MTR_7g115650 40.541 111 65 1 84 193 8 118 4.72e-24 98.6
MS.gene25971.t1 MTR_4g065017 42.857 119 63 2 77 190 2 120 5.03e-24 101
MS.gene25971.t1 MTR_6g027370 47.059 102 54 0 89 190 98 199 5.15e-24 101
MS.gene25971.t1 MTR_7g111290 48.454 97 47 2 90 184 14 109 5.77e-24 101
MS.gene25971.t1 MTR_5g042030 42.727 110 62 1 82 190 1 110 8.35e-24 99.8
MS.gene25971.t1 MTR_1g073170 47.917 96 47 2 90 183 22 116 9.04e-24 99.0
MS.gene25971.t1 MTR_7g011170 42.342 111 63 1 84 193 8 118 9.86e-24 100
MS.gene25971.t1 MTR_3g074520 46.602 103 52 2 90 190 14 115 9.88e-24 100
MS.gene25971.t1 MTR_1g085640 41.667 108 61 2 90 196 14 120 1.24e-23 100
MS.gene25971.t1 MTR_8g017440 39.474 114 66 2 90 201 14 126 1.44e-23 100
MS.gene25971.t1 MTR_1g076150 39.831 118 68 2 84 199 8 124 1.48e-23 98.6
MS.gene25971.t1 MTR_1g021230 43.363 113 58 2 90 201 59 166 1.58e-23 101
MS.gene25971.t1 MTR_2g034790 42.593 108 61 1 84 190 8 115 1.61e-23 99.8
MS.gene25971.t1 MTR_7g110830 42.593 108 60 2 90 196 14 120 1.64e-23 100
MS.gene25971.t1 MTR_5g010020 45.361 97 52 1 90 185 14 110 2.19e-23 99.8
MS.gene25971.t1 MTR_2g088170 46.774 124 61 3 80 201 21 141 2.21e-23 100
MS.gene25971.t1 MTR_8g031360 47.170 106 48 4 85 185 10 112 2.29e-23 98.6
MS.gene25971.t1 MTR_8g098860 30.851 188 106 3 90 253 14 201 2.63e-23 99.0
MS.gene25971.t1 MTR_1g100653 41.593 113 64 2 90 201 14 125 3.18e-23 98.2
MS.gene25971.t1 MTR_8g006470 46.078 102 53 2 90 189 12 113 4.96e-23 97.4
MS.gene25971.t1 MTR_7g035075 45.263 95 51 1 90 183 16 110 6.12e-23 95.5
MS.gene25971.t1 MTR_8g017540 42.718 103 56 2 90 190 60 161 7.88e-23 99.0
MS.gene25971.t1 MTR_5g079290 33.929 168 104 4 90 255 19 181 1.12e-22 96.3
MS.gene25971.t1 MTR_7g076740 35.928 167 77 6 90 251 14 155 1.16e-22 97.1
MS.gene25971.t1 MTR_4g063100 42.056 107 61 1 90 195 9 115 1.64e-22 95.5
MS.gene25971.t1 MTR_2g099740 42.718 103 56 2 90 190 14 115 1.94e-22 97.8
MS.gene25971.t1 MTR_4g082230 37.324 142 78 4 84 215 8 148 2.44e-22 97.4
MS.gene25971.t1 MTR_4g082290 36.879 141 80 3 84 215 8 148 3.52e-22 97.1
MS.gene25971.t1 MTR_0063s0090 42.373 118 60 3 90 205 14 125 3.78e-22 93.6
MS.gene25971.t1 MTR_8g017340 44.144 111 56 4 83 190 9 116 4.08e-22 97.4
MS.gene25971.t1 MTR_7g017260 40.323 124 70 2 86 205 23 146 4.44e-22 94.7
MS.gene25971.t1 MTR_8g017500 41.748 103 57 2 90 190 14 115 5.23e-22 95.9
MS.gene25971.t1 MTR_1g062940 37.600 125 75 2 87 209 5 128 5.30e-22 93.2
MS.gene25971.t1 MTR_4g029540 44.118 102 55 2 90 189 12 113 5.33e-22 94.7
MS.gene25971.t1 MTR_1g008970 59.459 74 29 1 113 185 113 186 7.56e-22 93.6
MS.gene25971.t1 MTR_6g012690 41.818 110 63 1 85 193 9 118 7.81e-22 95.5
MS.gene25971.t1 MTR_5g079220 42.056 107 59 2 90 194 23 128 7.84e-22 94.0
MS.gene25971.t1 MTR_5g078910 42.718 103 56 2 90 190 9 110 9.05e-22 94.4
MS.gene25971.t1 MTR_8g017390 41.441 111 59 4 83 190 9 116 9.71e-22 96.3
MS.gene25971.t1 MTR_6g006030 40.741 108 63 1 77 183 3 110 9.89e-22 92.0
MS.gene25971.t1 MTR_7g087130 41.441 111 64 1 84 193 8 118 1.07e-21 94.7
MS.gene25971.t1 MTR_4g097570 44.660 103 54 2 85 184 9 111 1.13e-21 94.0
MS.gene25971.t1 MTR_6g055910 39.831 118 69 2 79 195 6 122 1.29e-21 93.6
MS.gene25971.t1 MTR_3g083540 39.216 102 61 1 85 185 38 139 1.55e-21 93.6
MS.gene25971.t1 MTR_8g017350 43.243 111 57 4 83 190 9 116 1.58e-21 96.3
MS.gene25971.t1 MTR_0247s0040 44.000 100 55 1 90 188 9 108 1.60e-21 90.9
MS.gene25971.t1 MTR_3g103570 42.982 114 62 3 85 195 9 122 1.90e-21 94.4
MS.gene25971.t1 MTR_7g010210 41.121 107 62 1 90 195 14 120 1.93e-21 94.0
MS.gene25971.t1 MTR_3g039990 41.441 111 64 1 84 193 9 119 2.26e-21 93.6
MS.gene25971.t1 MTR_0197s0010 47.368 95 47 2 93 185 6 99 2.29e-21 91.7
MS.gene25971.t1 MTR_7g010210 41.905 105 60 1 90 193 14 118 2.31e-21 92.8
MS.gene25971.t1 MTR_5g078950 40.000 100 59 1 90 188 9 108 2.39e-21 92.4
MS.gene25971.t1 MTR_1g017140 37.594 133 74 3 85 208 9 141 2.56e-21 94.0
MS.gene25971.t1 MTR_6g090405 40.171 117 66 3 77 191 3 117 3.53e-21 91.7
MS.gene25971.t1 MTR_0140s0030 39.640 111 66 1 84 193 9 119 3.83e-21 93.2
MS.gene25971.t1 MTR_0489s0020 39.640 111 66 1 84 193 9 119 3.83e-21 93.2
MS.gene25971.t1 MTR_0001s0360 39.623 106 63 1 90 194 9 114 4.54e-21 91.3
MS.gene25971.t1 MTR_5g079120 38.346 133 70 3 81 205 54 182 5.11e-21 92.4
MS.gene25971.t1 MTR_5g078860 42.056 107 59 2 90 194 9 114 5.17e-21 92.4
MS.gene25971.t1 MTR_5g038910 42.982 114 62 2 80 191 17 129 6.10e-21 94.0
MS.gene25971.t1 MTR_6g012180 44.330 97 53 1 90 185 14 110 8.46e-21 92.0
MS.gene25971.t1 MTR_2g096380 41.667 108 60 2 90 195 8 114 1.02e-20 90.1
MS.gene25971.t1 MTR_5g038910 42.982 114 62 2 80 191 17 129 1.05e-20 92.8
MS.gene25971.t1 MTR_1g017000 37.931 116 68 3 77 190 3 116 1.05e-20 90.5
MS.gene25971.t1 MTR_4g097570 44.118 102 55 2 85 184 9 110 1.12e-20 91.3
MS.gene25971.t1 MTR_7g109320 39.216 153 90 2 84 233 8 160 1.63e-20 91.7
MS.gene25971.t1 MTR_5g078800 41.121 107 60 2 90 194 9 114 1.65e-20 90.1
MS.gene25971.t1 MTR_5g014990 41.667 108 61 2 85 190 9 116 2.27e-20 90.5
MS.gene25971.t1 MTR_2g095520 43.689 103 56 2 85 185 9 111 2.90e-20 90.5
MS.gene25971.t1 MTR_1g100667 40.000 105 62 1 90 193 15 119 3.40e-20 89.4
MS.gene25971.t1 MTR_1g086510 40.187 107 63 1 90 195 23 129 5.66e-20 88.6
MS.gene25971.t1 MTR_1g086530 39.815 108 62 2 90 195 35 141 6.59e-20 88.6
MS.gene25971.t1 MTR_0193s0090 41.584 101 58 1 90 189 9 109 7.29e-20 87.0
MS.gene25971.t1 MTR_8g468380 38.776 98 60 0 93 190 25 122 7.91e-20 90.5
MS.gene25971.t1 MTR_5g078930 43.878 98 52 2 90 185 11 107 8.89e-20 87.0
MS.gene25971.t1 MTR_8g060940 41.237 97 56 1 90 185 9 105 1.05e-19 87.4
MS.gene25971.t1 MTR_1g083630 40.566 106 62 1 86 190 10 115 1.83e-19 90.1
MS.gene25971.t1 MTR_2g033170 37.838 111 67 2 85 194 21 130 1.86e-19 88.2
MS.gene25971.t1 MTR_4g128670 43.689 103 56 2 85 185 9 111 1.98e-19 88.6
MS.gene25971.t1 MTR_7g035300 36.364 165 76 5 49 196 18 170 2.99e-19 85.9
MS.gene25971.t1 MTR_0008s0280 39.175 97 58 1 90 185 14 110 3.14e-19 85.9
MS.gene25971.t1 MTR_2g067420 42.268 97 55 1 90 185 16 112 9.27e-19 86.3
MS.gene25971.t1 MTR_4g128190 43.564 101 44 3 90 189 13 101 1.29e-18 84.3
MS.gene25971.t1 MTR_4g057635 39.815 108 63 2 85 190 9 116 1.41e-18 85.9
MS.gene25971.t1 MTR_7g102110 38.889 108 64 2 85 190 9 116 3.32e-18 84.0
MS.gene25971.t1 MTR_7g111290 54.839 62 28 0 123 184 6 67 4.86e-18 84.3
MS.gene25971.t1 MTR_4g123040 41.000 100 56 2 86 183 22 120 4.90e-18 84.0
MS.gene25971.t1 MTR_3g045430 35.294 102 65 1 93 193 18 119 5.37e-17 80.9
MS.gene25971.t1 MTR_7g061550 40.741 108 61 2 92 196 9 116 7.38e-17 81.3
MS.gene25971.t1 MTR_6g055910 43.836 73 41 0 123 195 21 93 9.94e-17 79.3
MS.gene25971.t1 MTR_4g063100 41.463 82 47 1 114 195 6 86 2.84e-16 77.4
MS.gene25971.t1 MTR_1g085880 38.739 111 64 3 93 201 17 125 1.86e-15 74.3
MS.gene25971.t1 MTR_1g085770 38.739 111 64 3 93 201 17 125 5.35e-15 75.1
MS.gene25971.t1 MTR_2g096380 39.726 73 44 0 123 195 23 95 5.26e-14 70.9
MS.gene25971.t1 MTR_6g080360 34.711 121 78 1 90 210 530 649 4.84e-13 70.9
MS.gene25971.t1 MTR_6g080360 35.052 97 62 1 87 183 476 571 4.02e-11 65.1
MS.gene25971.t1 MTR_5g007300 42.667 75 42 1 90 163 66 140 6.25e-13 65.9
MS.gene25971.t1 MTR_6g080360 34.711 121 78 1 90 210 310 429 1.06e-12 69.7
MS.gene25971.t1 MTR_6g080360 35.052 97 62 1 87 183 256 351 8.83e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25971.t1 AT4G18770 53.020 298 116 6 17 302 141 426 9.13e-96 291
MS.gene25971.t1 AT3G27785 64.000 150 50 2 74 219 173 322 4.35e-60 199
MS.gene25971.t1 AT5G58850 62.329 146 42 2 81 213 96 241 6.82e-55 186
MS.gene25971.t1 AT5G11050 45.992 237 107 7 87 313 102 327 5.81e-53 181
MS.gene25971.t1 AT5G40360 58.696 138 55 1 83 218 151 288 3.39e-50 172
MS.gene25971.t1 AT3G09370 59.167 120 47 1 87 204 132 251 1.92e-41 152
MS.gene25971.t1 AT3G09370 59.167 120 47 1 87 204 127 246 2.13e-41 152
MS.gene25971.t1 AT3G09370 59.167 120 47 1 87 204 140 259 2.48e-41 152
MS.gene25971.t1 AT5G02320 61.165 103 40 0 88 190 125 227 1.72e-39 147
MS.gene25971.t1 AT5G02320 61.165 103 40 0 88 190 125 227 1.72e-39 147
MS.gene25971.t1 AT5G02320 61.165 103 40 0 88 190 65 167 1.87e-39 146
MS.gene25971.t1 AT2G25230 48.529 136 70 0 81 216 17 152 9.36e-39 138
MS.gene25971.t1 AT5G11510 53.279 122 51 1 88 209 79 194 4.23e-38 145
MS.gene25971.t1 AT5G11510 53.279 122 51 1 88 209 79 194 4.23e-38 145
MS.gene25971.t1 AT5G11510 53.279 122 51 1 88 209 79 194 4.23e-38 145
MS.gene25971.t1 AT5G11510 53.279 122 51 1 88 209 79 194 4.33e-38 145
MS.gene25971.t1 AT5G11510 53.279 122 51 1 88 209 79 194 4.85e-38 145
MS.gene25971.t1 AT4G32730 55.000 120 49 1 88 207 85 199 6.04e-38 145
MS.gene25971.t1 AT4G32730 55.000 120 49 1 88 207 85 199 6.04e-38 145
MS.gene25971.t1 AT4G32730 55.000 120 49 1 88 207 85 199 6.04e-38 145
MS.gene25971.t1 AT4G32730 55.000 120 49 1 88 207 85 199 6.04e-38 145
MS.gene25971.t1 AT4G32730 55.000 120 49 1 88 207 85 199 7.33e-38 144
MS.gene25971.t1 AT3G55730 45.833 144 76 1 89 230 55 198 2.64e-36 136
MS.gene25971.t1 AT5G40430 46.154 143 74 3 81 222 45 185 2.92e-35 129
MS.gene25971.t1 AT4G37260 51.351 111 54 0 82 192 5 115 1.38e-33 127
MS.gene25971.t1 AT4G00540 59.615 104 39 1 90 190 103 206 2.26e-33 128
MS.gene25971.t1 AT2G23290 51.351 111 54 0 82 192 5 115 2.86e-33 125
MS.gene25971.t1 AT4G00540 59.615 104 39 1 90 190 101 204 5.87e-33 127
MS.gene25971.t1 AT3G09230 53.398 103 48 0 89 191 54 156 1.92e-31 122
MS.gene25971.t1 AT3G50060 48.077 104 54 0 89 192 5 108 5.52e-30 117
MS.gene25971.t1 AT5G67300 50.000 102 51 0 89 190 5 106 9.49e-30 116
MS.gene25971.t1 AT3G29020 50.000 106 50 1 90 192 65 170 1.51e-28 111
MS.gene25971.t1 AT3G29020 50.000 106 50 1 90 192 67 172 5.21e-28 111
MS.gene25971.t1 AT3G11440 45.000 120 61 3 84 201 37 153 1.01e-27 113
MS.gene25971.t1 AT2G39880 49.020 102 52 0 89 190 49 150 1.16e-27 112
MS.gene25971.t1 AT5G26660 36.527 167 100 4 90 254 14 176 1.43e-27 111
MS.gene25971.t1 AT3G11440 41.912 136 70 4 84 217 37 165 2.10e-27 113
MS.gene25971.t1 AT3G11440 41.912 136 70 4 84 217 37 165 2.10e-27 113
MS.gene25971.t1 AT3G11440 41.912 136 70 4 84 217 37 165 2.10e-27 113
MS.gene25971.t1 AT5G14750 40.000 120 71 1 88 206 16 135 2.42e-27 107
MS.gene25971.t1 AT3G28470 37.013 154 95 2 85 237 9 161 3.47e-27 109
MS.gene25971.t1 AT2G26960 35.484 186 95 4 85 269 17 178 4.70e-27 111
MS.gene25971.t1 AT1G22640 48.673 113 55 2 84 194 8 119 4.85e-27 107
MS.gene25971.t1 AT1G69560 41.549 142 75 2 65 200 92 231 5.34e-27 109
MS.gene25971.t1 AT1G69560 41.549 142 75 2 65 200 76 215 5.41e-27 109
MS.gene25971.t1 AT4G28110 49.020 102 51 1 90 190 14 115 6.16e-27 108
MS.gene25971.t1 AT1G74430 46.226 106 56 1 90 194 14 119 7.06e-27 107
MS.gene25971.t1 AT2G32460 47.826 115 53 4 90 201 8 118 1.30e-26 110
MS.gene25971.t1 AT4G26930 44.248 113 60 2 90 201 21 131 1.41e-26 109
MS.gene25971.t1 AT2G32460 47.826 115 53 4 90 201 20 130 1.42e-26 110
MS.gene25971.t1 AT4G38620 50.467 107 50 2 90 194 14 119 1.62e-26 107
MS.gene25971.t1 AT4G05100 46.018 113 60 1 82 193 7 119 1.87e-26 107
MS.gene25971.t1 AT1G26780 46.154 117 61 1 90 206 98 212 2.03e-26 106
MS.gene25971.t1 AT5G06100 44.737 114 58 3 90 201 34 144 2.07e-26 109
MS.gene25971.t1 AT5G55020 44.248 113 60 2 90 201 28 138 2.29e-26 110
MS.gene25971.t1 AT1G26780 46.154 117 61 1 90 206 98 212 3.17e-26 107
MS.gene25971.t1 AT2G26950 43.200 125 60 3 82 201 10 128 3.77e-26 108
MS.gene25971.t1 AT4G21440 49.020 102 51 1 90 190 14 115 4.14e-26 107
MS.gene25971.t1 AT4G33450 42.748 131 73 1 84 214 13 141 4.49e-26 105
MS.gene25971.t1 AT5G06100 44.737 114 58 3 90 201 34 144 4.72e-26 109
MS.gene25971.t1 AT5G06100 44.737 114 58 3 90 201 34 144 4.72e-26 109
MS.gene25971.t1 AT5G06100 44.737 114 58 3 90 201 34 144 4.72e-26 109
MS.gene25971.t1 AT5G06100 44.737 114 58 3 90 201 34 144 4.72e-26 109
MS.gene25971.t1 AT5G40330 34.503 171 95 4 84 247 8 168 8.42e-26 103
MS.gene25971.t1 AT5G12870 45.714 105 56 1 90 193 20 124 8.97e-26 105
MS.gene25971.t1 AT3G27920 45.455 99 53 1 88 185 14 112 1.03e-25 103
MS.gene25971.t1 AT4G22680 45.045 111 58 2 85 193 9 118 1.06e-25 104
MS.gene25971.t1 AT1G57560 44.860 107 56 2 90 194 14 119 1.20e-25 105
MS.gene25971.t1 AT1G57560 44.860 107 56 2 90 194 14 119 1.21e-25 104
MS.gene25971.t1 AT5G56110 45.455 110 59 1 84 192 8 117 1.26e-25 105
MS.gene25971.t1 AT1G09540 44.860 107 56 2 90 194 14 119 1.54e-25 105
MS.gene25971.t1 AT5G07690 48.649 111 54 2 76 185 2 110 1.97e-25 105
MS.gene25971.t1 AT5G54230 38.547 179 94 6 90 257 14 187 3.29e-25 104
MS.gene25971.t1 AT3G12720 45.192 104 54 2 90 191 24 126 3.91e-25 103
MS.gene25971.t1 AT4G09460 48.039 102 52 1 90 190 14 115 4.63e-25 102
MS.gene25971.t1 AT1G66230 43.243 111 60 2 85 193 9 118 5.06e-25 103
MS.gene25971.t1 AT5G35550 45.217 115 58 3 90 202 16 127 5.37e-25 102
MS.gene25971.t1 AT5G17800 42.241 116 67 0 90 205 93 208 1.11e-24 102
MS.gene25971.t1 AT5G61420 44.828 116 61 2 76 190 2 115 1.37e-24 103
MS.gene25971.t1 AT4G34990 47.222 108 55 2 90 196 14 120 1.69e-24 101
MS.gene25971.t1 AT5G60890 48.148 108 54 2 90 196 14 120 2.02e-24 101
MS.gene25971.t1 AT3G61250 37.736 159 74 4 85 241 9 144 2.37e-24 101
MS.gene25971.t1 AT1G17950 42.017 119 66 1 90 205 5 123 2.46e-24 100
MS.gene25971.t1 AT2G16720 47.107 121 58 4 76 193 2 119 2.47e-24 100
MS.gene25971.t1 AT5G07700 47.059 102 53 1 90 190 14 115 2.54e-24 102
MS.gene25971.t1 AT5G07700 47.059 102 53 1 90 190 14 115 2.54e-24 102
MS.gene25971.t1 AT1G35515 41.964 112 64 1 84 194 8 119 3.01e-24 99.4
MS.gene25971.t1 AT3G27810 33.133 166 91 2 90 254 22 168 3.20e-24 99.4
MS.gene25971.t1 AT4G12350 43.243 111 60 2 85 193 9 118 4.06e-24 100
MS.gene25971.t1 AT5G16600 43.243 111 60 2 85 193 9 118 5.85e-24 100
MS.gene25971.t1 AT3G13540 37.607 117 72 1 75 190 10 126 5.89e-24 99.4
MS.gene25971.t1 AT1G63910 39.062 128 72 2 90 216 14 136 6.59e-24 101
MS.gene25971.t1 AT2G47190 46.078 102 54 1 90 190 22 123 6.74e-24 99.8
MS.gene25971.t1 AT3G24310 45.946 111 52 3 90 198 20 124 9.36e-24 99.4
MS.gene25971.t1 AT1G18570 42.478 113 64 1 83 194 8 120 1.08e-23 100
MS.gene25971.t1 AT3G23250 41.667 108 62 1 84 190 8 115 1.10e-23 99.4
MS.gene25971.t1 AT5G16770 46.078 102 54 1 90 190 14 115 1.34e-23 100
MS.gene25971.t1 AT5G16770 46.078 102 54 1 90 190 14 115 1.34e-23 100
MS.gene25971.t1 AT5G14340 32.710 214 113 8 76 284 14 201 1.42e-23 99.0
MS.gene25971.t1 AT5G16770 46.078 102 54 1 90 190 14 115 1.97e-23 99.8
MS.gene25971.t1 AT5G16770 46.078 102 54 1 90 190 14 115 1.97e-23 99.8
MS.gene25971.t1 AT4G13480 40.496 121 69 2 90 208 8 127 2.12e-23 98.2
MS.gene25971.t1 AT1G06180 42.982 114 60 3 84 193 8 120 2.20e-23 97.8
MS.gene25971.t1 AT5G10280 45.631 103 53 2 90 190 14 115 2.20e-23 99.4
MS.gene25971.t1 AT3G08500 44.118 102 56 1 90 190 32 133 3.26e-23 99.4
MS.gene25971.t1 AT3G02940 45.098 102 55 1 90 190 14 115 3.62e-23 98.6
MS.gene25971.t1 AT1G74080 40.602 133 77 2 90 221 14 145 3.71e-23 99.0
MS.gene25971.t1 AT4G01680 41.509 106 61 1 90 194 14 119 4.83e-23 96.7
MS.gene25971.t1 AT1G73410 46.729 107 54 1 90 193 6 112 5.09e-23 96.7
MS.gene25971.t1 AT5G65230 45.631 103 53 2 90 190 14 115 5.55e-23 97.8
MS.gene25971.t1 AT3G13890 41.176 102 59 1 90 190 14 115 5.58e-23 99.0
MS.gene25971.t1 AT3G02940 45.098 102 55 1 90 190 14 115 5.71e-23 98.2
MS.gene25971.t1 AT3G02940 45.098 102 55 1 90 190 14 115 5.71e-23 98.2
MS.gene25971.t1 AT4G01680 41.509 106 61 1 90 194 14 119 6.47e-23 98.2
MS.gene25971.t1 AT5G62320 33.854 192 113 5 75 257 2 188 6.68e-23 96.3
MS.gene25971.t1 AT3G30210 44.545 110 56 2 90 198 29 134 7.58e-23 97.1
MS.gene25971.t1 AT1G73410 46.729 107 54 1 90 193 6 112 7.92e-23 95.1
MS.gene25971.t1 AT5G40350 41.818 110 62 2 90 198 19 127 1.19e-22 94.7
MS.gene25971.t1 AT1G68320 42.157 102 58 1 90 190 21 122 1.32e-22 96.3
MS.gene25971.t1 AT3G62610 41.667 108 62 1 84 190 8 115 1.39e-22 97.4
MS.gene25971.t1 AT3G01530 44.118 102 56 1 90 190 27 128 1.56e-22 94.4
MS.gene25971.t1 AT5G62470 40.909 110 65 0 84 193 8 117 1.72e-22 97.4
MS.gene25971.t1 AT1G25340 38.346 133 62 2 90 221 20 133 2.15e-22 95.9
MS.gene25971.t1 AT4G17785 43.689 103 55 2 90 190 15 116 2.32e-22 97.1
MS.gene25971.t1 AT2G31180 39.640 111 66 1 84 193 8 118 2.38e-22 95.1
MS.gene25971.t1 AT4G17785 43.689 103 55 2 90 190 15 116 2.62e-22 97.1
MS.gene25971.t1 AT3G60460 44.348 115 60 3 77 189 2 114 2.68e-22 95.9
MS.gene25971.t1 AT5G15310 41.818 110 63 1 85 193 9 118 2.96e-22 96.3
MS.gene25971.t1 AT3G13890 39.640 111 57 1 90 190 14 124 3.16e-22 96.7
MS.gene25971.t1 AT5G15310 41.818 110 63 1 85 193 9 118 3.31e-22 95.9
MS.gene25971.t1 AT5G15310 41.818 110 63 1 85 193 9 118 3.86e-22 94.4
MS.gene25971.t1 AT5G59780 40.909 110 62 2 88 195 8 116 4.37e-22 94.0
MS.gene25971.t1 AT5G26660 36.364 132 81 2 123 254 17 145 4.44e-22 95.5
MS.gene25971.t1 AT1G66370 40.870 115 59 2 90 199 10 120 5.61e-22 94.0
MS.gene25971.t1 AT1G18710 42.593 108 60 2 90 196 14 120 6.21e-22 94.4
MS.gene25971.t1 AT3G46130 42.593 108 59 2 90 195 11 117 8.03e-22 93.6
MS.gene25971.t1 AT1G25340 37.879 132 59 2 90 221 20 128 8.49e-22 94.0
MS.gene25971.t1 AT1G56160 39.831 118 66 3 77 192 5 119 8.99e-22 94.4
MS.gene25971.t1 AT1G48000 44.444 99 54 1 86 183 30 128 9.47e-22 93.2
MS.gene25971.t1 AT3G01140 41.818 110 63 1 85 193 9 118 9.99e-22 95.1
MS.gene25971.t1 AT3G01140 41.818 110 63 1 85 193 52 161 1.07e-21 95.5
MS.gene25971.t1 AT3G53200 42.623 122 63 3 83 202 4 120 1.31e-21 92.8
MS.gene25971.t1 AT5G52600 41.121 107 62 1 90 195 14 120 1.35e-21 91.7
MS.gene25971.t1 AT4G01680 38.983 118 59 2 90 194 14 131 1.49e-21 94.7
MS.gene25971.t1 AT1G25340 37.879 132 59 2 90 221 20 128 1.59e-21 94.0
MS.gene25971.t1 AT1G08810 42.727 110 62 1 85 193 9 118 1.91e-21 93.2
MS.gene25971.t1 AT2G47460 39.815 108 64 1 84 190 8 115 2.73e-21 94.4
MS.gene25971.t1 AT1G34670 43.137 102 57 1 90 190 14 115 3.78e-21 93.6
MS.gene25971.t1 AT3G47600 40.909 110 64 1 85 193 9 118 4.00e-21 93.2
MS.gene25971.t1 AT5G39700 35.802 162 96 3 35 196 9 162 4.66e-21 89.7
MS.gene25971.t1 AT3G48920 43.564 101 56 1 90 189 20 120 5.29e-21 91.7
MS.gene25971.t1 AT5G62470 40.541 111 65 1 84 193 8 118 6.30e-21 92.8
MS.gene25971.t1 AT1G16490 39.450 109 65 1 85 192 11 119 7.24e-21 91.3
MS.gene25971.t1 AT1G79180 37.288 118 73 1 85 201 11 128 8.94e-21 91.7
MS.gene25971.t1 AT4G37780 37.069 116 71 2 85 198 9 124 1.02e-20 91.7
MS.gene25971.t1 AT4G25560 39.815 108 64 1 90 196 12 119 1.21e-20 90.9
MS.gene25971.t1 AT1G66380 47.525 101 44 2 90 185 10 106 1.50e-20 87.0
MS.gene25971.t1 AT5G49330 39.815 108 64 1 84 190 8 115 1.97e-20 91.3
MS.gene25971.t1 AT3G28910 41.905 105 60 1 90 193 14 118 2.35e-20 90.9
MS.gene25971.t1 AT1G74650 40.741 108 63 1 84 190 8 115 2.38e-20 90.9
MS.gene25971.t1 AT5G49620 32.203 177 88 3 81 244 19 176 3.96e-20 90.1
MS.gene25971.t1 AT5G65790 39.062 128 75 3 85 210 9 135 6.95e-20 90.1
MS.gene25971.t1 AT5G57620 40.708 113 65 2 85 195 9 121 9.74e-20 89.4
MS.gene25971.t1 AT5G35550 48.750 80 39 1 123 202 53 130 1.99e-19 87.0
MS.gene25971.t1 AT5G14750 39.326 89 52 1 120 206 13 101 2.53e-19 84.7
MS.gene25971.t1 AT1G14350 40.860 93 55 0 93 185 28 120 5.77e-19 88.2
MS.gene25971.t1 AT1G14350 40.860 93 55 0 93 185 28 120 5.77e-19 88.2
MS.gene25971.t1 AT3G49690 41.667 108 61 2 85 190 9 116 6.30e-19 86.7
MS.gene25971.t1 AT1G56650 46.535 101 45 2 90 185 10 106 6.55e-19 85.5
MS.gene25971.t1 AT5G52260 41.071 112 63 2 90 199 14 124 1.12e-18 85.1
MS.gene25971.t1 AT3G12820 39.252 107 62 2 90 194 16 121 1.21e-18 84.3
MS.gene25971.t1 AT5G23000 41.026 117 63 3 77 190 3 116 2.10e-18 85.5
MS.gene25971.t1 AT2G02820 39.785 93 56 0 93 185 33 125 3.66e-18 84.7
MS.gene25971.t1 AT2G02820 39.785 93 56 0 93 185 33 125 5.54e-18 85.5
MS.gene25971.t1 AT2G02820 39.785 93 56 0 93 185 33 125 6.75e-18 85.1
MS.gene25971.t1 AT1G66390 42.991 107 52 2 90 191 10 112 1.77e-17 81.3
MS.gene25971.t1 AT3G06490 37.273 110 66 2 76 183 7 115 2.00e-17 82.4
MS.gene25971.t1 AT1G79180 44.304 79 44 0 123 201 83 161 2.13e-17 82.4
MS.gene25971.t1 AT3G27810 32.576 132 70 1 123 254 7 119 4.42e-17 78.6
MS.gene25971.t1 AT5G49620 29.843 191 88 4 81 244 19 190 8.73e-17 80.5
MS.gene25971.t1 AT2G36890 38.889 108 64 2 85 190 9 116 1.24e-16 79.7
MS.gene25971.t1 AT3G53200 47.500 80 38 1 123 202 12 87 1.31e-16 77.8
MS.gene25971.t1 AT2G36890 38.889 108 64 2 85 190 50 157 1.75e-16 80.1
MS.gene25971.t1 AT3G12820 45.833 72 39 0 123 194 2 73 2.51e-16 77.0
MS.gene25971.t1 AT2G37630 42.056 107 59 2 92 195 6 112 2.85e-16 79.7
MS.gene25971.t1 AT3G18100 40.426 94 56 0 90 183 546 639 4.80e-16 80.1
MS.gene25971.t1 AT3G18100 29.032 155 102 4 30 183 441 588 5.83e-13 70.5
MS.gene25971.t1 AT3G18100 40.426 94 56 0 90 183 498 591 5.84e-16 79.7
MS.gene25971.t1 AT3G18100 29.032 155 102 4 30 183 393 540 4.90e-13 70.9
MS.gene25971.t1 AT3G18100 40.426 94 56 0 90 183 333 426 8.03e-16 79.3
MS.gene25971.t1 AT3G18100 29.032 155 102 4 30 183 228 375 1.11e-12 69.7
MS.gene25971.t1 AT3G18100 40.426 94 56 0 90 183 385 478 8.71e-16 79.0
MS.gene25971.t1 AT3G18100 29.032 155 102 4 30 183 280 427 1.22e-12 69.3
MS.gene25971.t1 AT5G40350 44.737 76 41 1 123 198 8 82 1.21e-15 74.3
MS.gene25971.t1 AT5G59780 41.096 73 43 0 123 195 23 95 2.11e-15 74.7
MS.gene25971.t1 AT1G22640 52.459 61 29 0 134 194 2 62 2.93e-15 73.9
MS.gene25971.t1 AT3G46130 41.096 73 43 0 123 195 23 95 6.89e-15 73.9
MS.gene25971.t1 AT3G46130 41.096 73 43 0 123 195 13 85 7.27e-15 73.6
MS.gene25971.t1 AT1G71030 41.176 68 40 0 126 193 5 72 3.22e-14 70.5
MS.gene25971.t1 AT1G71030 41.176 68 40 0 126 193 19 86 3.47e-14 70.9
MS.gene25971.t1 AT3G47600 36.842 95 49 1 99 193 29 112 5.51e-14 72.4
MS.gene25971.t1 AT5G14750 35.616 73 47 0 134 206 2 74 7.34e-14 68.6
MS.gene25971.t1 AT5G14750 35.616 73 47 0 134 206 2 74 7.34e-14 68.6
MS.gene25971.t1 AT1G66380 50.794 63 31 0 123 185 11 73 4.74e-13 65.5
MS.gene25971.t1 AT3G23250 45.614 57 31 0 134 190 2 58 1.13e-11 64.3

Find 62 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTAAATGGAAAATAATTT+TGG 0.166549 3.3:-65900048 None:intergenic
AAGAAGATCAACTTTATAAA+AGG 0.205425 3.3:+65900214 MS.gene25971:CDS
GTTTCTTGAGAAATATTAAA+TGG 0.212262 3.3:-65900061 None:intergenic
GATGAGAATTTGTTTCAAAA+TGG 0.230233 3.3:+65901411 MS.gene25971:CDS
CTTTGATCTACCCTTTCTTT+TGG 0.231362 3.3:-65901166 None:intergenic
GTTATGGATAATTTCCTATA+TGG 0.248789 3.3:+65899962 None:intergenic
AGAAATGCCACTAGATATTA+TGG 0.284041 3.3:+65901521 MS.gene25971:CDS
AATTTCCTATATGGAGGTTA+TGG 0.307946 3.3:+65899971 MS.gene25971:CDS
TCATCTAAAGCCTGACATTA+AGG 0.317779 3.3:+65900525 MS.gene25971:CDS
GAGAACATGGTTTGAGAAAA+TGG 0.322172 3.3:+65900440 MS.gene25971:CDS
TAAGAAGGAGATGGATTTGA+TGG 0.326017 3.3:+65901566 MS.gene25971:CDS
TTTGTAGAAGAGTTCCTTTA+GGG 0.335398 3.3:-65901191 None:intergenic
TGGCATGAACAGAAATAATA+AGG 0.340684 3.3:+65900153 MS.gene25971:CDS
TGCTGAAGCTGATCAAATTA+TGG 0.373684 3.3:+65901470 MS.gene25971:CDS
TTCTCTTTGTTGCATTCCAA+TGG 0.381694 3.3:-65901134 None:intergenic
GGTACCAAACACTGATCATT+AGG 0.389697 3.3:-65901351 None:intergenic
ATGAGAATTTGTTTCAAAAT+GGG 0.396459 3.3:+65901412 MS.gene25971:CDS
AAACAGGTTGTTGGTTCAGC+TGG 0.412723 3.3:+65900414 MS.gene25971:intron
GAGAATTTGCCTGGTAGAAT+AGG 0.417263 3.3:+65900475 MS.gene25971:CDS
AATGGGCGGAGATAGCTAAA+AGG 0.422785 3.3:+65901079 MS.gene25971:CDS
TCAGGCTTTCTAGAGGCATA+AGG 0.428609 3.3:-65900181 None:intergenic
ATGAAGAGATAGGAAACAAA+TGG 0.432519 3.3:+65901061 MS.gene25971:CDS
GTTCAGCTGGTTGGAGAACA+TGG 0.436361 3.3:+65900427 MS.gene25971:CDS
GGAGATGGATTTGATGGAGA+TGG 0.438443 3.3:+65901572 MS.gene25971:CDS
GAATAATCAAATGGAAATGA+TGG 0.445628 3.3:+65900018 MS.gene25971:CDS
CCTTATTGCAGAAGGACATA+TGG 0.449990 3.3:+65901004 MS.gene25971:intron
TCAAGCCATAACCTCCATAT+AGG 0.457363 3.3:-65899976 None:intergenic
AAGACAATACTCCAAAAGAA+AGG 0.464183 3.3:+65901155 MS.gene25971:CDS
TAAGAATTCACCTTAATGTC+AGG 0.466977 3.3:-65900535 None:intergenic
AGAAGATCAACTTTATAAAA+GGG 0.467069 3.3:+65900215 MS.gene25971:CDS
GGACATATGGAGTGAGGAAG+AGG 0.467712 3.3:+65901017 MS.gene25971:CDS
CATATTGCTGAGAATTTGCC+TGG 0.468585 3.3:+65900466 MS.gene25971:CDS
ATCAAAGCACATGAAGAGAT+AGG 0.469111 3.3:+65901051 MS.gene25971:CDS
TTCTCAAAGGAATAATCAAA+TGG 0.473969 3.3:+65900009 MS.gene25971:CDS
GTGAATTATTACAAAAGAGT+TGG 0.476372 3.3:+65900133 MS.gene25971:CDS
TACAACACTATTCAAAGGCT+TGG 0.480870 3.3:-65900083 None:intergenic
GATATGCATGAGACTTCATC+TGG 0.491162 3.3:-65900106 None:intergenic
GCTTGGAGTTGAAGTTAAGA+AGG 0.493540 3.3:+65901551 MS.gene25971:CDS
AGTTGAAGTTAAGAAGGAGA+TGG 0.502240 3.3:+65901557 MS.gene25971:CDS
GATATTATGGAATCTATGCT+TGG 0.512953 3.3:+65901534 MS.gene25971:CDS
TTTGGTAATGACATCAACAT+TGG 0.526123 3.3:+65901633 MS.gene25971:CDS
TTTCTTCTATAATCTTTCGG+AGG 0.530747 3.3:-65901246 None:intergenic
GGTAGATCAAAGTACCCTAA+AGG 0.542452 3.3:+65901177 MS.gene25971:CDS
AGGTTGTTGGTTCAGCTGGT+TGG 0.546665 3.3:+65900418 MS.gene25971:intron
AGACAATACTCCAAAAGAAA+GGG 0.551275 3.3:+65901156 MS.gene25971:CDS
TGAAGAGATAGGAAACAAAT+GGG 0.553849 3.3:+65901062 MS.gene25971:CDS
TCTGGTACAACACTATTCAA+AGG 0.554355 3.3:-65900088 None:intergenic
ATGGATAATTTCCTATATGG+AGG 0.554615 3.3:+65899965 MS.gene25971:CDS
TTCTTCTATAATCTTTCGGA+GGG 0.559200 3.3:-65901245 None:intergenic
AACTTTCTCAGGCTTTCTAG+AGG 0.574016 3.3:-65900188 None:intergenic
GAGATAGCTAAAAGGTTACC+AGG 0.574186 3.3:+65901087 MS.gene25971:CDS
TGAACAGCAATCTTTCTCAA+AGG 0.574693 3.3:+65899996 MS.gene25971:CDS
TTCAGTTTGTTGAGACTGAG+AGG 0.582327 3.3:-65901319 None:intergenic
GGATAATGTTGTGCATCTGT+TGG 0.585302 3.3:-65901298 None:intergenic
GAAGCTGATCAAATTATGGA+AGG 0.586708 3.3:+65901474 MS.gene25971:CDS
ACATCATCAAAATCACAAGT+TGG 0.586726 3.3:-65901372 None:intergenic
TCAACTTTATAAAAGGGCAA+TGG 0.588167 3.3:+65900221 MS.gene25971:CDS
GAAAACAATGCAGAGAGAGA+TGG 0.604304 3.3:+65900497 MS.gene25971:CDS
AATGGACAGTAGAAGAAGAT+CGG 0.617069 3.3:+65900239 MS.gene25971:CDS
ATAGATTCCATAATATCTAG+TGG 0.637129 3.3:-65901528 None:intergenic
GCAGAAGGACATATGGAGTG+AGG 0.656245 3.3:+65901011 MS.gene25971:intron
AGAGATAGGAAACAAATGGG+CGG 0.736615 3.3:+65901065 MS.gene25971:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATGGAAAATAATTT+TGG - chr3.3:65900051-65900070 None:intergenic 10.0%
!!! AAAAAAAAAGTACCTATAAA+AGG - chr3.3:65900341-65900360 None:intergenic 15.0%
!!! AAAAAGTACAAATAATAATG+TGG + chr3.3:65900737-65900756 MS.gene25971:intron 15.0%
!! AAGAAGATCAACTTTATAAA+AGG + chr3.3:65900214-65900233 MS.gene25971:CDS 20.0%
!! AGAAGATCAACTTTATAAAA+GGG + chr3.3:65900215-65900234 MS.gene25971:CDS 20.0%
!! GTTTCTTGAGAAATATTAAA+TGG - chr3.3:65900064-65900083 None:intergenic 20.0%
!! TTTAGATCAAAATTCCAAAT+TGG - chr3.3:65900365-65900384 None:intergenic 20.0%
!!! ATGAGAATTTGTTTCAAAAT+GGG + chr3.3:65901412-65901431 MS.gene25971:CDS 20.0%
!!! GTACTTTTTTTTTACCAATT+TGG + chr3.3:65900348-65900367 MS.gene25971:intron 20.0%
!!! TTTGGAATTTTGATCTAAAA+AGG + chr3.3:65900366-65900385 MS.gene25971:intron 20.0%
! AAAACTCAATCAAAAACCAT+TGG + chr3.3:65901118-65901137 MS.gene25971:CDS 25.0%
! ATAGATTCCATAATATCTAG+TGG - chr3.3:65901531-65901550 None:intergenic 25.0%
! GAATAATCAAATGGAAATGA+TGG + chr3.3:65900018-65900037 MS.gene25971:CDS 25.0%
! GTGAATTATTACAAAAGAGT+TGG + chr3.3:65900133-65900152 MS.gene25971:CDS 25.0%
! TAATAAATCTTCGTTGAAGT+TGG + chr3.3:65900664-65900683 MS.gene25971:intron 25.0%
! TGTTTGCAATAAGATGTTTA+AGG + chr3.3:65900777-65900796 MS.gene25971:intron 25.0%
! TTCTCAAAGGAATAATCAAA+TGG + chr3.3:65900009-65900028 MS.gene25971:CDS 25.0%
!! GATGAGAATTTGTTTCAAAA+TGG + chr3.3:65901411-65901430 MS.gene25971:CDS 25.0%
!! GGTTTTCTTCTATAATCTTT+CGG - chr3.3:65901252-65901271 None:intergenic 25.0%
!! TCTTTTGTAATAATTCACTG+AGG - chr3.3:65900131-65900150 None:intergenic 25.0%
!!! ATCTTCTTTTTAACTTTCTC+AGG - chr3.3:65900202-65900221 None:intergenic 25.0%
!!! TACTTCACATTTCTTGTTTT+TGG + chr3.3:65900806-65900825 MS.gene25971:intron 25.0%
!!! TTTTCAAGTGACTCATATTT+TGG + chr3.3:65901615-65901634 MS.gene25971:CDS 25.0%
AAGACAATACTCCAAAAGAA+AGG + chr3.3:65901155-65901174 MS.gene25971:CDS 30.0%
AATTTCCTATATGGAGGTTA+TGG + chr3.3:65899971-65899990 MS.gene25971:CDS 30.0%
ACATCATCAAAATCACAAGT+TGG - chr3.3:65901375-65901394 None:intergenic 30.0%
ACTTCTTTATAGACTATCGA+AGG - chr3.3:65900640-65900659 None:intergenic 30.0%
AGAAATGCCACTAGATATTA+TGG + chr3.3:65901521-65901540 MS.gene25971:CDS 30.0%
AGACAATACTCCAAAAGAAA+GGG + chr3.3:65901156-65901175 MS.gene25971:CDS 30.0%
AGATGAGACATACATTTGTT+AGG - chr3.3:65900698-65900717 None:intergenic 30.0%
ATGAAGAGATAGGAAACAAA+TGG + chr3.3:65901061-65901080 MS.gene25971:CDS 30.0%
ATGGATAATTTCCTATATGG+AGG + chr3.3:65899965-65899984 MS.gene25971:CDS 30.0%
CTTCTTTATAGACTATCGAA+GGG - chr3.3:65900639-65900658 None:intergenic 30.0%
GATATTATGGAATCTATGCT+TGG + chr3.3:65901534-65901553 MS.gene25971:CDS 30.0%
TAAGAATTCACCTTAATGTC+AGG - chr3.3:65900538-65900557 None:intergenic 30.0%
TATTGCAAACACATGTGTAT+CGG - chr3.3:65900768-65900787 None:intergenic 30.0%
TCAACTTTATAAAAGGGCAA+TGG + chr3.3:65900221-65900240 MS.gene25971:CDS 30.0%
TGAAGAGATAGGAAACAAAT+GGG + chr3.3:65901062-65901081 MS.gene25971:CDS 30.0%
TGGCATGAACAGAAATAATA+AGG + chr3.3:65900153-65900172 MS.gene25971:CDS 30.0%
TTCTCATCGAAAGAAAAATC+CGG - chr3.3:65901399-65901418 None:intergenic 30.0%
TTCTTCTATAATCTTTCGGA+GGG - chr3.3:65901248-65901267 None:intergenic 30.0%
TTTCTTCTATAATCTTTCGG+AGG - chr3.3:65901249-65901268 None:intergenic 30.0%
TTTGTAGAAGAGTTCCTTTA+GGG - chr3.3:65901194-65901213 None:intergenic 30.0%
! GATGAGACATACATTTGTTA+GGG - chr3.3:65900697-65900716 None:intergenic 30.0%
! TGCAATAAGATGTTTAAGGT+AGG + chr3.3:65900781-65900800 MS.gene25971:intron 30.0%
! TTTTCCTAATGATCAGTGTT+TGG + chr3.3:65901347-65901366 MS.gene25971:CDS 30.0%
! TTTTGTAGAAGAGTTCCTTT+AGG - chr3.3:65901195-65901214 None:intergenic 30.0%
! TTTTTCATAGCATTAGCTGA+AGG - chr3.3:65901273-65901292 None:intergenic 30.0%
!! GTGACTGTTTTTCCTTTTAT+AGG + chr3.3:65900326-65900345 MS.gene25971:intron 30.0%
!! TTTGGTAATGACATCAACAT+TGG + chr3.3:65901633-65901652 MS.gene25971:CDS 30.0%
AATGGACAGTAGAAGAAGAT+CGG + chr3.3:65900239-65900258 MS.gene25971:CDS 35.0%
AGTTGAAGTTAAGAAGGAGA+TGG + chr3.3:65901557-65901576 MS.gene25971:CDS 35.0%
ATATGTGTGCATGCAAAAAC+AGG + chr3.3:65900398-65900417 MS.gene25971:intron 35.0%
ATCAAAGCACATGAAGAGAT+AGG + chr3.3:65901051-65901070 MS.gene25971:CDS 35.0%
GAAGCTGATCAAATTATGGA+AGG + chr3.3:65901474-65901493 MS.gene25971:CDS 35.0%
GAGAACATGGTTTGAGAAAA+TGG + chr3.3:65900440-65900459 MS.gene25971:CDS 35.0%
TAAATCTTCGTTGAAGTTGG+TGG + chr3.3:65900667-65900686 MS.gene25971:intron 35.0%
TACAACACTATTCAAAGGCT+TGG - chr3.3:65900086-65900105 None:intergenic 35.0%
TCTCATCGAAAGAAAAATCC+GGG - chr3.3:65901398-65901417 None:intergenic 35.0%
TCTGGTACAACACTATTCAA+AGG - chr3.3:65900091-65900110 None:intergenic 35.0%
TGAACAGCAATCTTTCTCAA+AGG + chr3.3:65899996-65900015 MS.gene25971:CDS 35.0%
TGCTGAAGCTGATCAAATTA+TGG + chr3.3:65901470-65901489 MS.gene25971:CDS 35.0%
TTCTCTTTGTTGCATTCCAA+TGG - chr3.3:65901137-65901156 None:intergenic 35.0%
! ATTGAGTTTTCAGTTCTTCC+TGG - chr3.3:65901108-65901127 None:intergenic 35.0%
! CATTGTTTTCCTATTCTACC+AGG - chr3.3:65900487-65900506 None:intergenic 35.0%
! CTTTGATCTACCCTTTCTTT+TGG - chr3.3:65901169-65901188 None:intergenic 35.0%
! TAAGAAGGAGATGGATTTGA+TGG + chr3.3:65901566-65901585 MS.gene25971:CDS 35.0%
! TCATCTAAAGCCTGACATTA+AGG + chr3.3:65900525-65900544 MS.gene25971:CDS 35.0%
!!! TTGATGGAGATGGTTTTTTC+AGG + chr3.3:65901582-65901601 MS.gene25971:CDS 35.0%
!!! TTGTGATTTTGATGATGTCC+CGG + chr3.3:65901377-65901396 MS.gene25971:CDS 35.0%
AACTTTCTCAGGCTTTCTAG+AGG - chr3.3:65900191-65900210 None:intergenic 40.0%
AGAGATAGGAAACAAATGGG+CGG + chr3.3:65901065-65901084 MS.gene25971:CDS 40.0%
CATATTGCTGAGAATTTGCC+TGG + chr3.3:65900466-65900485 MS.gene25971:CDS 40.0%
CCATATGTCCTTCTGCAATA+AGG - chr3.3:65901007-65901026 None:intergenic 40.0%
CCTTATTGCAGAAGGACATA+TGG + chr3.3:65901004-65901023 MS.gene25971:intron 40.0%
GAAAACAATGCAGAGAGAGA+TGG + chr3.3:65900497-65900516 MS.gene25971:CDS 40.0%
GAGAATTTGCCTGGTAGAAT+AGG + chr3.3:65900475-65900494 MS.gene25971:CDS 40.0%
GAGATAGCTAAAAGGTTACC+AGG + chr3.3:65901087-65901106 MS.gene25971:CDS 40.0%
GATATGCATGAGACTTCATC+TGG - chr3.3:65900109-65900128 None:intergenic 40.0%
GCTTGGAGTTGAAGTTAAGA+AGG + chr3.3:65901551-65901570 MS.gene25971:CDS 40.0%
GGATAATGTTGTGCATCTGT+TGG - chr3.3:65901301-65901320 None:intergenic 40.0%
GGTACCAAACACTGATCATT+AGG - chr3.3:65901354-65901373 None:intergenic 40.0%
TCAAGCCATAACCTCCATAT+AGG - chr3.3:65899979-65899998 None:intergenic 40.0%
TGCATGCAAAAACAGGTTGT+TGG + chr3.3:65900405-65900424 MS.gene25971:intron 40.0%
! ATGTTGTGCCTTATTGCAGA+AGG + chr3.3:65900996-65901015 MS.gene25971:intron 40.0%
! GGTAGATCAAAGTACCCTAA+AGG + chr3.3:65901177-65901196 MS.gene25971:CDS 40.0%
!! TAGCACATTAGCACTGACTT+AGG + chr3.3:65900596-65900615 MS.gene25971:intron 40.0%
!! TTCAGTTTGTTGAGACTGAG+AGG - chr3.3:65901322-65901341 None:intergenic 40.0%
AATGGGCGGAGATAGCTAAA+AGG + chr3.3:65901079-65901098 MS.gene25971:CDS 45.0%
! GGAGATGGATTTGATGGAGA+TGG + chr3.3:65901572-65901591 MS.gene25971:CDS 45.0%
! TCAGGCTTTCTAGAGGCATA+AGG - chr3.3:65900184-65900203 None:intergenic 45.0%
!! AAACAGGTTGTTGGTTCAGC+TGG + chr3.3:65900414-65900433 MS.gene25971:intron 45.0%
GCAGAAGGACATATGGAGTG+AGG + chr3.3:65901011-65901030 MS.gene25971:intron 50.0%
GGACATATGGAGTGAGGAAG+AGG + chr3.3:65901017-65901036 MS.gene25971:CDS 50.0%
GTTCAGCTGGTTGGAGAACA+TGG + chr3.3:65900427-65900446 MS.gene25971:CDS 50.0%
! CTTTCGGAGGGTTTTCGTCT+AGG - chr3.3:65901236-65901255 None:intergenic 50.0%
!! AGGTTGTTGGTTCAGCTGGT+TGG + chr3.3:65900418-65900437 MS.gene25971:intron 50.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 65899965 65901662 65899965 ID=MS.gene25971
chr3.3 mRNA 65899965 65901662 65899965 ID=MS.gene25971.t1;Parent=MS.gene25971
chr3.3 exon 65899965 65900260 65899965 ID=MS.gene25971.t1.exon1;Parent=MS.gene25971.t1
chr3.3 CDS 65899965 65900260 65899965 ID=cds.MS.gene25971.t1;Parent=MS.gene25971.t1
chr3.3 exon 65900420 65900546 65900420 ID=MS.gene25971.t1.exon2;Parent=MS.gene25971.t1
chr3.3 CDS 65900420 65900546 65900420 ID=cds.MS.gene25971.t1;Parent=MS.gene25971.t1
chr3.3 exon 65901015 65901662 65901015 ID=MS.gene25971.t1.exon3;Parent=MS.gene25971.t1
chr3.3 CDS 65901015 65901662 65901015 ID=cds.MS.gene25971.t1;Parent=MS.gene25971.t1
Gene Sequence

>MS.gene25971

ATGGATAATTTCCTATATGGAGGTTATGGCTTGAACAGCAATCTTTCTCAAAGGAATAATCAAATGGAAATGATGGTTACAAACCAAAATTATTTTCCATTTAATATTTCTCAAGAAACCAAGCCTTTGAATAGTGTTGTACCAGATGAAGTCTCATGCATATCCTCAGTGAATTATTACAAAAGAGTTGGCATGAACAGAAATAATAAGGCATATCCTTATGCCTCTAGAAAGCCTGAGAAAGTTAAAAAGAAGATCAACTTTATAAAAGGGCAATGGACAGTAGAAGAAGATCGGTACATACATAAAAACATGAAACATTTTTTTTTCTTACTATTATTTATCAGTTACTTTTTAATTTGTGACTGTTTTTCCTTTTATAGGTACTTTTTTTTTACCAATTTGGAATTTTGATCTAAAAAGGTTATGATGTATATGTGTGCATGCAAAAACAGGTTGTTGGTTCAGCTGGTTGGAGAACATGGTTTGAGAAAATGGTCTCATATTGCTGAGAATTTGCCTGGTAGAATAGGAAAACAATGCAGAGAGAGATGGCATAATCATCTAAAGCCTGACATTAAGGTGAATTCTTATTTACTATATTATATACATATACTTTTATAACTTAGCTTAGCACATTAGCACTGACTTAGGTTCAAATTTGACATTCTCCCTTCGATAGTCTATAAAGAAGTTATATAATAAATCTTCGTTGAAGTTGGTGGTTTTCCCTAACAAATGTATGTCTCATCTAATCTAAATTTTTATCGATAAAAAGTACAAATAATAATGTGGAAATACCGATACACATGTGTTTGCAATAAGATGTTTAAGGTAGGTTTACTTCACATTTCTTGTTTTTGGTTTTTATTTTCAAATCAACTAATAAACATTATACGATATAGATTTAAAATTGAACTCGCTATTTTCTTTTACATTTTGTTCACTATTTGAGTCTTTCATCGCTTCTTAACAATTTAAAACGAATACAAATTTTAGATATCGAAACTAAAAAATATTTTTTTCAATTCATGTTGTGCCTTATTGCAGAAGGACATATGGAGTGAGGAAGAGGACAACATATTGATCAAAGCACATGAAGAGATAGGAAACAAATGGGCGGAGATAGCTAAAAGGTTACCAGGAAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACAAAGAGAAGACAATACTCCAAAAGAAAGGGTAGATCAAAGTACCCTAAAGGAACTCTTCTACAAAAATATATCAAGAGCTTAAACCTAGACGAAAACCCTCCGAAAGATTATAGAAGAAAACCTTCAGCTAATGCTATGAAAAACAAAACCAACAGATGCACAACATTATCCTCTCAGTCTCAACAAACTGAACAATTTTTTCCTAATGATCAGTGTTTGGTACCAACTTGTGATTTTGATGATGTCCCGGATTTTTCTTTCGATGAGAATTTGTTTCAAAATGGGTGTAGTATTGATTCTCTACTAGATGATATGCAATGTGCTGAAGCTGATCAAATTATGGAAGGAAAAAAACATTTTGATGTTGAGACAGAAATGCCACTAGATATTATGGAATCTATGCTTGGAGTTGAAGTTAAGAAGGAGATGGATTTGATGGAGATGGTTTTTTCAGGTCAACGAAAATTTTCAAGTGACTCATATTTTGGTAATGACATCAACATTGGTTTGTGA
Protein sequence

>MS.gene25971.t1

MDNFLYGGYGLNSNLSQRNNQMEMMVTNQNYFPFNISQETKPLNSVVPDEVSCISSVNYYKRVGMNRNNKAYPYASRKPEKVKKKINFIKGQWTVEEDRLLVQLVGEHGLRKWSHIAENLPGRIGKQCRERWHNHLKPDIKKDIWSEEEDNILIKAHEEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKGRSKYPKGTLLQKYIKSLNLDENPPKDYRRKPSANAMKNKTNRCTTLSSQSQQTEQFFPNDQCLVPTCDFDDVPDFSFDENLFQNGCSIDSLLDDMQCAEADQIMEGKKHFDVETEMPLDIMESMLGVEVKKEMDLMEMVFSGQRKFSSDSYFGNDINIGL