AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26002

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26002.t1 MTR_3g077110 91.691 349 19 2 1 339 1 349 0.0 648
MS.gene26002.t1 MTR_1g112760 69.759 291 22 6 3 292 4 229 7.36e-130 370
MS.gene26002.t1 MTR_4g105130 54.145 386 105 15 1 339 1 361 1.00e-118 347
MS.gene26002.t1 MTR_7g110830 50.781 256 118 4 1 249 1 255 1.23e-75 237
MS.gene26002.t1 MTR_1g085040 83.465 127 21 0 1 127 1 127 3.18e-75 236
MS.gene26002.t1 MTR_1g085640 79.528 127 26 0 1 127 1 127 1.23e-72 230
MS.gene26002.t1 MTR_7g111290 81.343 134 25 0 1 134 1 134 2.01e-69 221
MS.gene26002.t1 MTR_8g017440 52.885 208 89 3 1 199 1 208 6.11e-67 214
MS.gene26002.t1 MTR_2g099740 76.000 125 30 0 1 125 1 125 3.47e-66 214
MS.gene26002.t1 MTR_2g064160 72.222 126 34 1 1 126 1 125 1.88e-64 207
MS.gene26002.t1 MTR_8g017540 74.194 124 32 0 1 124 47 170 1.96e-64 209
MS.gene26002.t1 MTR_8g017500 71.774 124 35 0 1 124 1 124 3.18e-63 204
MS.gene26002.t1 MTR_3g097450 66.929 127 42 0 1 127 1 127 3.55e-61 197
MS.gene26002.t1 MTR_8g017390 76.271 118 27 1 1 117 1 118 4.52e-60 200
MS.gene26002.t1 MTR_8g017340 72.000 125 34 1 1 124 1 125 1.53e-59 199
MS.gene26002.t1 MTR_8g098860 69.748 119 36 0 1 119 1 119 2.93e-59 193
MS.gene26002.t1 MTR_5g079670 64.800 125 44 0 3 127 2 126 3.02e-59 190
MS.gene26002.t1 MTR_8g095390 66.142 127 43 0 1 127 1 127 1.51e-58 191
MS.gene26002.t1 MTR_8g017350 71.200 125 35 1 1 124 1 125 1.84e-58 199
MS.gene26002.t1 MTR_3g065440 64.662 133 47 0 1 133 1 133 7.27e-58 189
MS.gene26002.t1 MTR_4g073420 53.416 161 69 1 1 155 1 161 1.12e-57 188
MS.gene26002.t1 MTR_4g478180 61.194 134 52 0 1 134 2 135 2.17e-57 189
MS.gene26002.t1 MTR_5g078140 66.142 127 43 0 1 127 1 127 3.72e-57 188
MS.gene26002.t1 MTR_4g065017 79.245 106 22 0 11 116 16 121 5.79e-57 188
MS.gene26002.t1 MTR_4g082230 66.142 127 43 0 1 127 1 127 9.16e-57 189
MS.gene26002.t1 MTR_7g011170 51.955 179 72 1 1 179 1 165 1.23e-56 186
MS.gene26002.t1 MTR_5g010020 71.818 110 31 0 1 110 1 110 1.23e-56 187
MS.gene26002.t1 MTR_4g102380 63.780 127 46 0 1 127 1 127 1.51e-56 185
MS.gene26002.t1 MTR_3g028740 77.778 108 24 0 9 116 19 126 2.24e-56 187
MS.gene26002.t1 MTR_4g082290 66.929 127 42 0 1 127 1 127 2.26e-56 188
MS.gene26002.t1 MTR_5g007370 65.600 125 43 0 12 136 12 136 2.39e-56 185
MS.gene26002.t1 MTR_2g097910 78.095 105 23 0 12 116 20 124 2.46e-56 186
MS.gene26002.t1 MTR_6g009430 51.807 166 66 2 1 152 1 166 2.91e-56 186
MS.gene26002.t1 MTR_3g074520 62.992 127 47 0 1 127 1 127 3.67e-56 186
MS.gene26002.t1 MTR_5g029840 62.992 127 47 0 1 127 1 127 1.21e-55 184
MS.gene26002.t1 MTR_6g012690 65.354 127 44 0 1 127 1 127 2.11e-55 184
MS.gene26002.t1 MTR_8g031360 51.010 198 80 4 1 194 1 185 2.19e-55 182
MS.gene26002.t1 MTR_7g076740 65.625 128 43 1 1 127 1 128 3.09e-55 182
MS.gene26002.t1 MTR_2g089620 63.492 126 46 0 1 126 1 126 1.31e-54 182
MS.gene26002.t1 MTR_6g055910 54.598 174 69 4 9 174 11 182 3.10e-54 179
MS.gene26002.t1 MTR_2g011660 62.205 127 47 1 1 126 1 127 3.71e-54 181
MS.gene26002.t1 MTR_3g461490 62.791 129 48 0 1 129 1 129 9.28e-54 179
MS.gene26002.t1 MTR_1g100667 69.421 121 36 1 9 129 10 129 1.24e-53 177
MS.gene26002.t1 MTR_4g091490 61.417 127 48 1 1 126 1 127 3.36e-53 179
MS.gene26002.t1 MTR_4g485530 61.111 126 49 0 1 126 1 126 6.41e-53 173
MS.gene26002.t1 MTR_7g115650 61.157 121 47 0 1 121 1 121 1.90e-51 169
MS.gene26002.t1 MTR_1g100653 63.559 118 43 0 1 118 1 118 2.14e-51 172
MS.gene26002.t1 MTR_2g089450 64.035 114 40 1 5 118 6 118 6.47e-51 170
MS.gene26002.t1 MTR_3g083540 62.295 122 46 0 6 127 35 156 8.07e-51 171
MS.gene26002.t1 MTR_4g125520 44.292 219 100 5 1 213 1 203 2.42e-50 170
MS.gene26002.t1 MTR_7g096930 63.793 116 42 0 1 116 1 116 4.88e-50 168
MS.gene26002.t1 MTR_0251s0050 61.261 111 43 0 6 116 7 117 2.12e-49 166
MS.gene26002.t1 MTR_1g076150 66.379 116 39 0 1 116 1 116 4.69e-49 165
MS.gene26002.t1 MTR_0008s0390 60.714 112 44 0 6 117 7 118 1.30e-48 164
MS.gene26002.t1 MTR_1g017140 38.267 277 138 8 1 259 1 262 1.06e-47 164
MS.gene26002.t1 MTR_1g043080 61.538 117 45 0 1 117 1 117 3.75e-47 160
MS.gene26002.t1 MTR_2g089420 64.486 107 38 0 12 118 11 117 6.84e-47 165
MS.gene26002.t1 MTR_0008s0470 58.929 112 46 0 6 117 7 118 1.22e-46 160
MS.gene26002.t1 MTR_1g043050 62.393 117 44 0 1 117 1 117 1.45e-46 159
MS.gene26002.t1 MTR_5g042030 61.207 116 45 0 12 127 7 122 2.43e-46 159
MS.gene26002.t1 MTR_1g017000 55.085 118 52 1 1 117 1 118 2.71e-46 158
MS.gene26002.t1 MTR_4g121460 62.069 116 44 0 1 116 1 116 4.42e-46 160
MS.gene26002.t1 MTR_8g027345 60.169 118 47 0 1 118 1 118 4.94e-46 159
MS.gene26002.t1 MTR_7g117730 59.664 119 48 0 1 119 1 119 8.60e-46 157
MS.gene26002.t1 MTR_5g014990 50.327 153 72 3 1 151 1 151 1.58e-45 157
MS.gene26002.t1 MTR_7g010210 45.989 187 91 2 1 187 1 177 3.40e-45 155
MS.gene26002.t1 MTR_2g034790 61.207 116 45 0 1 116 1 116 3.74e-45 157
MS.gene26002.t1 MTR_7g010210 46.524 187 90 3 1 187 1 177 3.78e-45 157
MS.gene26002.t1 MTR_4g057635 60.169 118 46 1 1 117 1 118 3.98e-45 157
MS.gene26002.t1 MTR_2g067420 61.468 109 42 0 2 110 4 112 1.63e-44 155
MS.gene26002.t1 MTR_3g103570 56.780 118 50 1 1 117 1 118 1.23e-43 154
MS.gene26002.t1 MTR_8g020490 46.154 169 83 4 10 174 6 170 3.47e-43 150
MS.gene26002.t1 MTR_0140s0030 51.825 137 60 1 1 131 2 138 4.78e-43 152
MS.gene26002.t1 MTR_0489s0020 51.825 137 60 1 1 131 2 138 4.78e-43 152
MS.gene26002.t1 MTR_7g102110 55.932 118 51 1 1 117 1 118 1.08e-42 149
MS.gene26002.t1 MTR_7g087130 56.349 126 53 1 1 124 1 126 1.52e-42 150
MS.gene26002.t1 MTR_2g095520 59.459 111 44 1 1 110 1 111 7.78e-42 148
MS.gene26002.t1 MTR_4g100720 60.748 107 42 0 9 115 10 116 7.90e-42 144
MS.gene26002.t1 MTR_6g090405 51.471 136 65 1 1 135 1 136 8.19e-42 146
MS.gene26002.t1 MTR_3g039990 58.475 118 49 0 1 118 2 119 1.04e-41 147
MS.gene26002.t1 MTR_1g073170 60.000 105 42 0 11 115 19 123 2.47e-41 145
MS.gene26002.t1 MTR_4g097570 59.091 110 44 1 1 109 1 110 4.36e-41 145
MS.gene26002.t1 MTR_1g045610 61.165 103 40 0 13 115 22 124 7.79e-41 144
MS.gene26002.t1 MTR_7g111290 78.261 92 20 0 43 134 1 92 2.93e-40 144
MS.gene26002.t1 MTR_4g097570 58.559 111 44 2 1 109 1 111 3.72e-40 143
MS.gene26002.t1 MTR_7g035075 55.085 118 51 1 1 116 1 118 5.71e-40 140
MS.gene26002.t1 MTR_6g012180 59.091 110 45 0 1 110 1 110 5.85e-40 143
MS.gene26002.t1 MTR_3g052430 53.719 121 55 1 12 132 41 160 6.97e-40 147
MS.gene26002.t1 MTR_1g062940 45.517 145 73 1 12 156 6 144 7.88e-40 140
MS.gene26002.t1 MTR_7g109320 62.069 116 44 0 1 116 1 116 8.89e-40 144
MS.gene26002.t1 MTR_4g128670 55.856 111 48 1 1 110 1 111 1.24e-39 143
MS.gene26002.t1 MTR_0063s0090 58.095 105 44 0 9 113 9 113 1.89e-39 139
MS.gene26002.t1 MTR_6g006030 54.237 118 52 1 1 116 1 118 1.91e-39 139
MS.gene26002.t1 MTR_1g021230 59.615 104 42 0 12 115 57 160 1.92e-39 144
MS.gene26002.t1 MTR_0008s0280 56.604 106 46 0 9 114 9 114 2.32e-39 139
MS.gene26002.t1 MTR_3g052450 53.846 117 53 1 12 128 40 155 2.98e-39 145
MS.gene26002.t1 MTR_1g110460 51.220 123 59 1 11 133 25 146 7.96e-39 140
MS.gene26002.t1 MTR_8g042410 58.654 104 43 0 12 115 37 140 1.10e-38 144
MS.gene26002.t1 MTR_1g086530 53.153 111 52 0 12 122 33 143 1.15e-38 139
MS.gene26002.t1 MTR_2g096380 47.244 127 65 1 8 132 2 128 2.27e-38 137
MS.gene26002.t1 MTR_4g063100 54.206 107 49 0 13 119 8 114 2.32e-38 137
MS.gene26002.t1 MTR_5g079120 44.586 157 70 2 9 163 58 199 3.05e-38 138
MS.gene26002.t1 MTR_3g011610 57.692 104 44 0 12 115 37 140 3.77e-38 142
MS.gene26002.t1 MTR_1g086510 57.692 104 44 0 12 115 21 124 6.73e-38 136
MS.gene26002.t1 MTR_3g045430 50.000 124 62 0 6 129 7 130 1.08e-37 137
MS.gene26002.t1 MTR_0197s0010 58.000 100 42 0 17 116 6 105 5.50e-37 133
MS.gene26002.t1 MTR_5g078800 54.545 110 50 0 10 119 5 114 1.38e-36 133
MS.gene26002.t1 MTR_5g078930 43.976 166 85 3 13 174 10 171 1.81e-36 131
MS.gene26002.t1 MTR_5g079290 48.333 120 62 0 2 121 7 126 2.19e-36 132
MS.gene26002.t1 MTR_0247s0040 56.863 102 44 0 12 113 7 108 2.94e-36 129
MS.gene26002.t1 MTR_5g078910 54.630 108 49 0 10 117 5 112 3.54e-36 132
MS.gene26002.t1 MTR_6g055910 50.000 140 60 4 43 174 16 153 3.91e-36 131
MS.gene26002.t1 MTR_0193s0090 41.520 171 99 1 12 182 7 176 5.68e-36 129
MS.gene26002.t1 MTR_8g060940 56.436 101 44 0 12 112 7 107 1.67e-35 129
MS.gene26002.t1 MTR_5g079220 51.818 110 53 0 10 119 19 128 3.54e-35 129
MS.gene26002.t1 MTR_2g088170 57.944 107 45 0 9 115 26 132 4.24e-35 133
MS.gene26002.t1 MTR_7g017260 46.763 139 55 2 12 148 25 146 1.38e-34 128
MS.gene26002.t1 MTR_5g078860 51.818 110 53 0 10 119 5 114 1.56e-34 128
MS.gene26002.t1 MTR_0001s0360 50.000 112 56 0 8 119 3 114 3.05e-34 126
MS.gene26002.t1 MTR_5g078950 51.923 104 50 0 10 113 5 108 1.62e-33 125
MS.gene26002.t1 MTR_1g083630 45.985 137 68 1 11 141 11 147 3.21e-33 130
MS.gene26002.t1 MTR_5g062790 50.893 112 53 2 13 123 10 120 3.56e-33 125
MS.gene26002.t1 MTR_8g006470 52.336 107 50 1 9 114 7 113 6.42e-33 124
MS.gene26002.t1 MTR_5g088080 50.893 112 53 2 13 123 13 123 2.66e-32 121
MS.gene26002.t1 MTR_5g088150 50.893 112 53 2 13 123 13 123 2.66e-32 121
MS.gene26002.t1 MTR_5g488210 50.893 112 53 2 13 123 13 123 2.66e-32 121
MS.gene26002.t1 MTR_5g088640 50.893 112 53 2 13 123 13 123 2.73e-32 122
MS.gene26002.t1 MTR_5g488170 50.893 112 53 2 13 123 13 123 3.21e-32 120
MS.gene26002.t1 MTR_2g033170 55.340 103 46 0 12 114 24 126 3.23e-32 123
MS.gene26002.t1 MTR_4g123040 51.695 118 56 1 12 129 24 140 3.59e-31 120
MS.gene26002.t1 MTR_4g029540 51.923 104 49 1 12 114 10 113 4.40e-30 116
MS.gene26002.t1 MTR_5g007300 62.500 80 30 0 9 88 61 140 6.12e-30 111
MS.gene26002.t1 MTR_5g088610 50.000 112 54 2 13 123 10 120 1.15e-29 116
MS.gene26002.t1 MTR_4g063100 59.740 77 31 0 43 119 9 85 4.48e-29 112
MS.gene26002.t1 MTR_4g019370 45.865 133 68 3 14 145 38 167 1.67e-28 113
MS.gene26002.t1 MTR_5g049190 44.643 112 59 2 9 119 14 123 2.02e-28 110
MS.gene26002.t1 MTR_3g463400 48.571 105 51 2 12 115 131 233 3.76e-28 114
MS.gene26002.t1 MTR_2g096380 52.174 92 42 1 43 132 18 109 5.24e-28 108
MS.gene26002.t1 MTR_5g016510 50.909 110 51 2 14 122 5 112 1.47e-27 110
MS.gene26002.t1 MTR_5g070020 45.714 105 54 2 12 115 120 222 1.73e-27 110
MS.gene26002.t1 MTR_4g094982 51.961 102 48 1 14 115 5 105 1.93e-27 108
MS.gene26002.t1 MTR_7g061330 50.909 110 51 2 8 116 107 214 3.05e-27 112
MS.gene26002.t1 MTR_7g461410 50.909 110 51 2 8 116 107 214 3.05e-27 112
MS.gene26002.t1 MTR_7g061330 50.909 110 51 2 8 116 71 178 3.55e-27 112
MS.gene26002.t1 MTR_4g128190 43.443 122 53 3 12 132 11 117 1.94e-26 105
MS.gene26002.t1 MTR_4g105660 42.857 112 61 2 9 119 175 284 3.04e-26 108
MS.gene26002.t1 MTR_1g085880 49.138 116 56 3 10 123 9 123 5.10e-26 103
MS.gene26002.t1 MTR_3g077650 42.609 115 61 3 8 119 173 285 1.80e-25 106
MS.gene26002.t1 MTR_3g101290 50.485 103 48 2 14 115 37 137 2.87e-25 102
MS.gene26002.t1 MTR_3g110028 47.273 110 55 2 8 116 79 186 2.93e-25 107
MS.gene26002.t1 MTR_7g035350 43.750 112 55 3 3 113 219 323 3.72e-25 105
MS.gene26002.t1 MTR_1g085770 51.402 107 50 2 10 114 9 115 3.78e-25 103
MS.gene26002.t1 MTR_1g057980 45.098 102 55 1 12 113 78 178 1.57e-24 101
MS.gene26002.t1 MTR_6g015455 50.485 103 48 2 14 115 5 105 1.72e-24 105
MS.gene26002.t1 MTR_6g074860 47.423 97 48 2 14 109 4 98 2.60e-24 99.8
MS.gene26002.t1 MTR_7g037260 37.063 143 80 3 14 147 145 286 2.69e-24 102
MS.gene26002.t1 MTR_7g451170 42.718 103 56 2 14 115 191 291 4.10e-24 102
MS.gene26002.t1 MTR_5g041570 42.727 110 60 2 11 119 131 238 9.79e-24 101
MS.gene26002.t1 MTR_1g026870 45.455 110 57 2 8 116 79 186 1.03e-23 102
MS.gene26002.t1 MTR_4g088015 41.121 107 60 2 14 119 221 325 2.07e-23 100
MS.gene26002.t1 MTR_4g082040 43.925 107 57 2 14 119 105 209 2.19e-23 100
MS.gene26002.t1 MTR_8g017480 75.000 52 13 0 1 52 1 52 6.55e-23 90.5
MS.gene26002.t1 MTR_6g027360 46.465 99 50 2 11 108 75 171 1.58e-22 96.3
MS.gene26002.t1 MTR_6g027340 44.444 99 52 2 11 108 13 109 8.76e-22 92.0
MS.gene26002.t1 MTR_5g082910 48.000 100 49 2 14 112 19 116 9.32e-22 94.0
MS.gene26002.t1 MTR_7g450950 40.187 107 58 3 14 116 157 261 1.11e-21 94.4
MS.gene26002.t1 MTR_3g089045 44.860 107 56 2 14 119 16 120 1.37e-21 93.6
MS.gene26002.t1 MTR_7g037130 38.182 110 64 2 14 120 145 253 4.20e-20 90.1
MS.gene26002.t1 MTR_7g061550 32.432 148 89 3 17 153 10 157 8.37e-20 89.4
MS.gene26002.t1 MTR_6g027370 40.777 103 58 2 14 115 99 199 1.32e-19 89.0
MS.gene26002.t1 MTR_5g010650 43.000 100 54 2 12 110 108 205 3.33e-19 88.6
MS.gene26002.t1 MTR_0023s0210 49.351 77 39 0 12 88 7 83 5.84e-19 80.5
MS.gene26002.t1 MTR_7g086960 41.121 107 60 2 14 119 89 193 2.53e-18 85.1
MS.gene26002.t1 MTR_6g055910 42.105 114 56 4 69 174 1 112 7.53e-18 81.3
MS.gene26002.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 1.78e-14 73.9
MS.gene26002.t1 MTR_5g038910 35.354 99 63 1 17 115 29 126 2.42e-14 73.9
MS.gene26002.t1 MTR_8g468380 33.884 121 78 2 2 122 10 128 1.50e-13 71.6
MS.gene26002.t1 MTR_4g063100 52.000 50 24 0 70 119 1 50 2.27e-12 65.5
MS.gene26002.t1 MTR_2g096380 44.615 65 34 1 70 132 1 65 2.63e-12 64.7
MS.gene26002.t1 MTR_2g088730 60.976 41 16 0 70 110 34 74 1.40e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26002.t1 AT5G26660 81.818 132 24 0 1 132 1 132 7.16e-77 240
MS.gene26002.t1 AT4G01680 75.000 144 34 2 1 144 1 142 2.48e-74 229
MS.gene26002.t1 AT1G57560 80.315 127 25 0 1 127 1 127 1.54e-73 230
MS.gene26002.t1 AT1G57560 80.315 127 25 0 1 127 1 127 1.87e-73 228
MS.gene26002.t1 AT4G01680 75.000 144 34 2 1 144 1 142 3.19e-73 230
MS.gene26002.t1 AT1G09540 73.103 145 36 2 1 145 1 142 1.59e-72 229
MS.gene26002.t1 AT4G01680 69.231 156 34 3 1 144 1 154 1.79e-69 221
MS.gene26002.t1 AT3G13890 79.487 117 24 0 1 117 1 117 1.49e-64 208
MS.gene26002.t1 AT3G12720 71.429 126 35 1 1 126 12 136 6.93e-64 205
MS.gene26002.t1 AT3G13890 73.810 126 24 1 1 117 1 126 1.93e-61 201
MS.gene26002.t1 AT1G63910 71.186 118 34 0 1 118 1 118 4.68e-59 194
MS.gene26002.t1 AT4G34990 65.354 127 44 0 1 127 1 127 1.25e-58 190
MS.gene26002.t1 AT2G16720 64.567 127 45 0 1 127 1 127 2.22e-58 189
MS.gene26002.t1 AT3G01140 59.589 146 59 0 1 146 1 146 4.03e-58 191
MS.gene26002.t1 AT1G66230 60.417 144 52 1 1 144 1 139 1.16e-57 188
MS.gene26002.t1 AT5G65230 63.158 133 49 0 1 133 1 133 2.77e-57 188
MS.gene26002.t1 AT4G05100 63.780 127 45 1 1 126 1 127 6.52e-57 187
MS.gene26002.t1 AT5G10280 64.567 127 45 0 1 127 1 127 7.76e-57 187
MS.gene26002.t1 AT3G02940 62.205 127 48 0 1 127 1 127 8.18e-57 187
MS.gene26002.t1 AT4G12350 64.567 127 45 0 1 127 1 127 9.71e-57 186
MS.gene26002.t1 AT4G21440 61.194 134 52 0 1 134 1 134 1.74e-56 187
MS.gene26002.t1 AT4G38620 54.967 151 64 1 1 151 1 147 1.92e-56 185
MS.gene26002.t1 AT4G22680 60.000 145 57 1 1 145 1 144 1.98e-56 184
MS.gene26002.t1 AT3G02940 62.205 127 48 0 1 127 1 127 2.12e-56 186
MS.gene26002.t1 AT3G02940 62.205 127 48 0 1 127 1 127 2.12e-56 186
MS.gene26002.t1 AT3G61250 65.354 127 44 0 1 127 1 127 2.70e-56 185
MS.gene26002.t1 AT1G22640 61.417 127 49 0 1 127 1 127 2.77e-56 184
MS.gene26002.t1 AT5G15310 65.354 127 44 0 1 127 1 127 3.82e-56 183
MS.gene26002.t1 AT4G09460 61.240 129 50 0 1 129 1 129 4.90e-56 182
MS.gene26002.t1 AT5G16600 66.142 127 43 0 1 127 1 127 6.91e-56 185
MS.gene26002.t1 AT5G12870 76.147 109 26 0 10 118 16 124 8.13e-56 183
MS.gene26002.t1 AT5G15310 65.354 127 44 0 1 127 1 127 9.57e-56 184
MS.gene26002.t1 AT5G15310 65.354 127 44 0 1 127 1 127 1.12e-55 184
MS.gene26002.t1 AT5G16770 58.088 136 57 0 1 136 1 136 1.93e-55 184
MS.gene26002.t1 AT5G16770 58.088 136 57 0 1 136 1 136 1.93e-55 184
MS.gene26002.t1 AT3G01140 59.574 141 57 0 6 146 49 189 1.98e-55 186
MS.gene26002.t1 AT4G28110 61.111 126 49 0 1 126 1 126 2.24e-55 182
MS.gene26002.t1 AT5G16770 58.088 136 57 0 1 136 1 136 3.13e-55 184
MS.gene26002.t1 AT5G16770 58.088 136 57 0 1 136 1 136 3.13e-55 184
MS.gene26002.t1 AT5G54230 62.595 131 49 0 1 131 1 131 4.53e-55 182
MS.gene26002.t1 AT1G34670 62.992 127 47 0 1 127 1 127 6.47e-55 184
MS.gene26002.t1 AT5G56110 62.791 129 48 0 1 129 1 129 9.62e-55 182
MS.gene26002.t1 AT4G17785 57.971 138 57 1 1 137 1 138 2.30e-54 182
MS.gene26002.t1 AT3G08500 75.926 108 26 0 9 116 27 134 2.41e-54 181
MS.gene26002.t1 AT4G17785 57.971 138 57 1 1 137 1 138 2.48e-54 182
MS.gene26002.t1 AT5G14340 49.162 179 89 1 1 179 13 189 1.07e-53 177
MS.gene26002.t1 AT1G35515 59.231 130 53 0 1 130 1 130 1.15e-53 176
MS.gene26002.t1 AT5G61420 54.167 144 66 0 1 144 1 144 1.55e-53 180
MS.gene26002.t1 AT5G62320 57.778 135 50 1 2 129 3 137 2.15e-53 176
MS.gene26002.t1 AT5G60890 59.055 127 52 0 1 127 1 127 1.01e-52 176
MS.gene26002.t1 AT2G31180 57.447 141 59 1 1 141 1 140 1.12e-52 174
MS.gene26002.t1 AT1G18570 58.140 129 54 0 6 134 7 135 3.58e-52 176
MS.gene26002.t1 AT1G74430 63.780 127 46 0 1 127 1 127 3.96e-52 174
MS.gene26002.t1 AT3G13540 60.465 129 50 1 6 133 17 145 8.33e-52 172
MS.gene26002.t1 AT3G28470 64.567 127 45 0 1 127 1 127 1.02e-51 174
MS.gene26002.t1 AT1G74080 58.015 131 55 0 1 131 1 131 1.58e-51 174
MS.gene26002.t1 AT5G07690 59.055 127 52 0 1 127 1 127 1.86e-51 174
MS.gene26002.t1 AT1G06180 66.379 116 39 0 1 116 1 116 1.28e-50 169
MS.gene26002.t1 AT5G07700 58.400 125 51 1 3 127 4 127 4.55e-50 170
MS.gene26002.t1 AT5G07700 58.400 125 51 1 3 127 4 127 4.55e-50 170
MS.gene26002.t1 AT3G23250 62.069 116 44 0 1 116 1 116 1.58e-48 164
MS.gene26002.t1 AT1G18710 56.391 133 58 0 1 133 1 133 1.86e-48 164
MS.gene26002.t1 AT1G56160 64.348 115 41 0 2 116 4 118 1.87e-48 165
MS.gene26002.t1 AT3G48920 61.983 121 43 2 9 128 15 133 4.16e-48 163
MS.gene26002.t1 AT1G79180 62.393 117 44 0 2 118 4 120 5.20e-48 164
MS.gene26002.t1 AT4G25560 66.055 109 37 0 10 118 8 116 9.49e-48 162
MS.gene26002.t1 AT5G52260 67.273 110 36 0 9 118 9 118 5.39e-47 160
MS.gene26002.t1 AT5G26660 80.682 88 17 0 45 132 14 101 1.97e-46 160
MS.gene26002.t1 AT1G16490 61.739 115 44 0 2 116 4 118 2.85e-46 158
MS.gene26002.t1 AT3G12820 61.538 117 45 0 3 119 5 121 3.50e-46 157
MS.gene26002.t1 AT2G47460 62.069 116 44 0 1 116 1 116 7.39e-46 160
MS.gene26002.t1 AT3G62610 61.207 116 45 0 1 116 1 116 8.82e-46 159
MS.gene26002.t1 AT5G49330 55.224 134 59 1 1 133 1 134 1.96e-45 158
MS.gene26002.t1 AT5G35550 48.023 177 87 3 9 180 11 187 2.85e-45 155
MS.gene26002.t1 AT5G57620 58.475 118 48 1 1 117 1 118 3.29e-45 157
MS.gene26002.t1 AT5G65790 58.333 120 49 1 1 119 1 120 4.34e-45 158
MS.gene26002.t1 AT5G23000 59.322 118 47 1 1 117 1 118 5.17e-45 157
MS.gene26002.t1 AT3G49690 58.333 120 49 1 1 119 1 120 1.19e-44 155
MS.gene26002.t1 AT5G14750 60.577 104 41 0 13 116 17 120 5.97e-44 150
MS.gene26002.t1 AT3G47600 59.322 118 48 0 1 118 1 118 1.67e-43 153
MS.gene26002.t1 AT1G74650 59.829 117 47 0 1 117 1 117 3.58e-43 152
MS.gene26002.t1 AT5G62470 59.322 118 48 0 1 118 1 118 5.01e-43 152
MS.gene26002.t1 AT1G08810 58.197 122 51 0 1 122 1 122 5.97e-43 150
MS.gene26002.t1 AT2G36890 52.308 130 60 2 1 129 1 129 9.93e-43 150
MS.gene26002.t1 AT3G01530 55.556 117 52 0 12 128 25 141 1.16e-42 147
MS.gene26002.t1 AT5G40330 59.615 104 42 0 13 116 13 116 1.28e-42 147
MS.gene26002.t1 AT2G36890 52.308 130 60 2 1 129 42 170 1.61e-42 150
MS.gene26002.t1 AT3G27920 56.481 108 47 0 10 117 12 119 2.36e-42 147
MS.gene26002.t1 AT4G37780 56.557 122 51 2 1 120 1 122 7.18e-42 148
MS.gene26002.t1 AT5G62470 59.322 118 47 1 1 118 1 117 3.55e-41 147
MS.gene26002.t1 AT1G79180 48.667 150 44 1 2 118 4 153 4.60e-41 146
MS.gene26002.t1 AT5G40350 56.364 110 48 0 11 120 16 125 5.58e-41 143
MS.gene26002.t1 AT5G52600 57.944 107 45 0 9 115 9 115 6.09e-41 142
MS.gene26002.t1 AT5G55020 60.909 110 42 1 12 121 26 134 6.74e-41 150
MS.gene26002.t1 AT3G28910 57.627 118 50 0 1 118 1 118 1.04e-40 145
MS.gene26002.t1 AT3G24310 58.333 108 45 0 8 115 14 121 1.26e-40 144
MS.gene26002.t1 AT4G26930 59.091 110 44 1 12 121 19 127 1.45e-40 146
MS.gene26002.t1 AT4G13480 59.259 108 44 0 8 115 2 109 2.19e-40 142
MS.gene26002.t1 AT1G48000 46.341 164 70 4 11 172 31 178 2.89e-40 142
MS.gene26002.t1 AT3G27810 54.054 111 51 0 11 121 19 129 9.76e-40 140
MS.gene26002.t1 AT5G06100 58.654 104 43 0 12 115 32 135 2.16e-39 145
MS.gene26002.t1 AT2G26960 48.227 141 60 2 7 136 15 153 6.45e-39 143
MS.gene26002.t1 AT5G06100 58.654 104 43 0 12 115 32 135 8.23e-39 144
MS.gene26002.t1 AT5G06100 58.654 104 43 0 12 115 32 135 8.23e-39 144
MS.gene26002.t1 AT5G06100 58.654 104 43 0 12 115 32 135 8.23e-39 144
MS.gene26002.t1 AT5G06100 58.654 104 43 0 12 115 32 135 8.23e-39 144
MS.gene26002.t1 AT1G68320 52.500 120 57 0 10 129 17 136 1.01e-38 139
MS.gene26002.t1 AT2G32460 51.613 124 49 1 10 122 16 139 1.72e-38 143
MS.gene26002.t1 AT3G30210 60.784 102 40 0 13 114 28 129 1.74e-38 138
MS.gene26002.t1 AT2G32460 50.794 126 51 1 8 122 2 127 1.74e-38 142
MS.gene26002.t1 AT3G11440 55.769 104 46 0 12 115 41 144 3.45e-38 142
MS.gene26002.t1 AT1G25340 40.000 195 97 4 13 188 19 212 8.79e-38 136
MS.gene26002.t1 AT3G11440 55.769 104 46 0 12 115 41 144 1.54e-37 141
MS.gene26002.t1 AT3G11440 55.769 104 46 0 12 115 41 144 1.54e-37 141
MS.gene26002.t1 AT3G11440 55.769 104 46 0 12 115 41 144 1.54e-37 141
MS.gene26002.t1 AT5G59780 51.786 112 54 0 8 119 4 115 1.57e-37 134
MS.gene26002.t1 AT3G46130 53.271 107 50 0 13 119 10 116 1.04e-36 133
MS.gene26002.t1 AT1G66370 55.769 104 46 0 12 115 8 111 1.42e-35 130
MS.gene26002.t1 AT3G53200 52.252 111 53 0 9 119 6 116 1.57e-35 129
MS.gene26002.t1 AT2G47190 50.962 104 51 0 12 115 20 123 5.60e-35 129
MS.gene26002.t1 AT3G06490 58.252 103 43 0 12 114 19 121 3.30e-34 128
MS.gene26002.t1 AT1G66380 58.654 104 43 0 12 115 8 111 1.03e-33 121
MS.gene26002.t1 AT2G26950 45.299 117 63 1 5 121 9 124 2.82e-33 127
MS.gene26002.t1 AT3G12820 72.222 72 20 0 48 119 2 73 4.20e-33 121
MS.gene26002.t1 AT5G35550 48.951 143 68 3 43 180 48 190 4.67e-33 123
MS.gene26002.t1 AT3G60460 51.327 113 54 1 3 114 2 114 4.73e-33 124
MS.gene26002.t1 AT1G25340 38.462 195 95 5 13 188 19 207 6.23e-33 124
MS.gene26002.t1 AT1G25340 49.194 124 57 2 13 136 19 136 1.11e-32 124
MS.gene26002.t1 AT1G56650 57.692 104 44 0 12 115 8 111 2.27e-32 121
MS.gene26002.t1 AT5G49620 55.340 103 46 0 12 114 26 128 4.45e-32 122
MS.gene26002.t1 AT1G66390 56.604 106 46 0 10 115 6 111 8.39e-32 120
MS.gene26002.t1 AT5G14750 69.565 69 21 0 48 116 18 86 4.61e-31 115
MS.gene26002.t1 AT5G40350 59.211 76 31 0 45 120 5 80 4.66e-29 110
MS.gene26002.t1 AT5G02320 35.223 247 127 11 8 234 121 354 6.74e-29 117
MS.gene26002.t1 AT5G02320 35.223 247 127 11 8 234 121 354 6.74e-29 117
MS.gene26002.t1 AT5G02320 35.223 247 127 11 8 234 61 294 7.64e-29 116
MS.gene26002.t1 AT3G47600 54.737 95 39 1 24 118 22 112 1.27e-28 113
MS.gene26002.t1 AT5G49620 48.718 117 46 1 12 114 26 142 1.92e-28 112
MS.gene26002.t1 AT3G27810 55.844 77 34 0 45 121 4 80 4.21e-28 108
MS.gene26002.t1 AT1G22640 62.857 70 26 0 58 127 1 70 6.53e-28 108
MS.gene26002.t1 AT3G27785 43.966 116 60 3 3 115 176 289 7.61e-28 113
MS.gene26002.t1 AT3G46130 56.627 83 34 1 44 124 9 91 8.56e-28 108
MS.gene26002.t1 AT1G18960 45.600 125 60 4 6 129 5 122 1.63e-27 110
MS.gene26002.t1 AT3G46130 60.000 75 30 0 45 119 20 94 2.68e-27 107
MS.gene26002.t1 AT5G59780 60.000 75 30 0 45 119 20 94 2.95e-27 107
MS.gene26002.t1 AT3G09370 31.868 273 136 11 8 247 124 379 4.54e-27 111
MS.gene26002.t1 AT1G71030 56.471 85 35 1 51 133 5 89 4.92e-27 105
MS.gene26002.t1 AT3G09370 31.868 273 136 11 8 247 129 384 5.02e-27 111
MS.gene26002.t1 AT1G71030 56.471 85 35 1 51 133 19 103 6.15e-27 105
MS.gene26002.t1 AT3G09370 31.868 273 136 11 8 247 137 392 9.88e-27 110
MS.gene26002.t1 AT4G18770 43.750 112 60 2 9 119 212 321 1.05e-26 109
MS.gene26002.t1 AT3G53200 60.000 75 30 0 45 119 9 83 5.93e-26 103
MS.gene26002.t1 AT5G67300 49.515 103 49 2 14 115 6 106 6.57e-26 105
MS.gene26002.t1 AT2G39880 50.467 107 50 2 14 119 50 154 7.39e-26 106
MS.gene26002.t1 AT4G37260 49.074 108 52 2 14 120 13 118 5.71e-25 103
MS.gene26002.t1 AT5G58850 44.037 109 58 2 12 119 103 209 6.96e-25 104
MS.gene26002.t1 AT1G66380 59.740 77 31 0 39 115 2 78 1.17e-24 96.7
MS.gene26002.t1 AT5G40360 40.566 106 62 1 9 114 153 257 1.19e-24 103
MS.gene26002.t1 AT3G50060 48.544 103 50 2 14 115 6 106 1.36e-24 102
MS.gene26002.t1 AT2G23290 51.456 103 47 2 14 115 13 113 1.94e-24 101
MS.gene26002.t1 AT1G69560 42.105 114 63 2 7 119 100 211 2.51e-24 101
MS.gene26002.t1 AT5G11510 46.364 110 56 2 8 116 75 182 2.75e-24 104
MS.gene26002.t1 AT5G11510 46.364 110 56 2 8 116 75 182 2.75e-24 104
MS.gene26002.t1 AT5G11510 46.364 110 56 2 8 116 75 182 2.75e-24 104
MS.gene26002.t1 AT3G09230 48.571 105 51 2 14 117 55 157 3.37e-24 102
MS.gene26002.t1 AT5G11510 46.364 110 56 2 8 116 75 182 3.45e-24 103
MS.gene26002.t1 AT5G11510 46.364 110 56 2 8 116 75 182 3.46e-24 103
MS.gene26002.t1 AT1G69560 41.739 115 64 2 7 120 116 228 3.50e-24 101
MS.gene26002.t1 AT3G55730 51.456 103 47 2 14 115 56 156 3.63e-24 102
MS.gene26002.t1 AT5G11050 39.516 124 72 2 14 136 105 226 3.84e-24 102
MS.gene26002.t1 AT3G23250 69.492 59 18 0 58 116 1 59 9.55e-24 97.8
MS.gene26002.t1 AT1G26780 43.810 105 56 2 12 115 96 198 2.53e-23 97.8
MS.gene26002.t1 AT1G17950 44.660 103 54 2 14 115 5 105 2.54e-23 97.4
MS.gene26002.t1 AT4G32730 44.545 110 58 2 8 116 81 188 5.20e-23 100
MS.gene26002.t1 AT4G32730 44.545 110 58 2 8 116 81 188 5.38e-23 100
MS.gene26002.t1 AT4G32730 44.545 110 58 2 8 116 81 188 5.38e-23 100
MS.gene26002.t1 AT4G32730 44.545 110 58 2 8 116 81 188 5.38e-23 100
MS.gene26002.t1 AT4G32730 44.545 110 58 2 8 116 81 188 5.38e-23 100
MS.gene26002.t1 AT1G26780 43.810 105 56 2 12 115 96 198 6.72e-23 98.2
MS.gene26002.t1 AT2G25230 39.823 113 65 2 9 120 21 131 5.18e-22 93.2
MS.gene26002.t1 AT5G14750 64.407 59 21 0 58 116 1 59 7.40e-22 90.5
MS.gene26002.t1 AT5G14750 64.407 59 21 0 58 116 1 59 7.40e-22 90.5
MS.gene26002.t1 AT3G29020 37.719 114 68 2 7 119 58 169 2.72e-21 91.3
MS.gene26002.t1 AT1G73410 43.689 103 55 2 14 115 6 106 2.85e-21 91.7
MS.gene26002.t1 AT3G29020 37.719 114 68 2 7 119 60 171 3.65e-21 92.4
MS.gene26002.t1 AT1G73410 43.689 103 55 2 14 115 6 106 6.63e-21 89.7
MS.gene26002.t1 AT1G66380 56.250 80 35 0 10 89 6 85 1.21e-20 86.3
MS.gene26002.t1 AT5G17800 41.176 102 59 1 14 115 93 193 1.33e-20 91.3
MS.gene26002.t1 AT4G33450 38.393 112 66 2 5 115 10 119 2.79e-20 89.0
MS.gene26002.t1 AT4G00540 42.478 113 59 3 8 116 97 207 2.49e-19 88.6
MS.gene26002.t1 AT4G00540 42.478 113 59 3 8 116 95 205 4.68e-19 88.2
MS.gene26002.t1 AT5G40430 36.283 113 68 3 9 120 49 158 5.84e-18 82.8
MS.gene26002.t1 AT2G37630 34.014 147 74 2 17 161 7 132 8.01e-18 84.0
MS.gene26002.t1 AT2G02820 36.190 105 66 1 17 121 33 136 1.10e-16 80.1
MS.gene26002.t1 AT5G61420 53.125 64 30 0 81 144 2 65 1.22e-16 79.3
MS.gene26002.t1 AT2G02820 36.190 105 66 1 17 121 33 136 1.27e-16 80.9
MS.gene26002.t1 AT2G02820 36.190 105 66 1 17 121 33 136 2.01e-16 80.5
MS.gene26002.t1 AT1G14350 33.083 133 83 2 17 144 28 159 4.26e-16 79.3
MS.gene26002.t1 AT1G14350 33.083 133 83 2 17 144 28 159 4.26e-16 79.3
MS.gene26002.t1 AT5G39700 35.135 111 71 1 9 119 51 160 1.89e-15 74.3
MS.gene26002.t1 AT4G25560 62.000 50 19 0 69 118 1 50 1.01e-14 72.8
MS.gene26002.t1 AT4G28110 66.667 39 13 0 88 126 4 42 2.08e-13 68.6
MS.gene26002.t1 AT1G74430 58.824 51 21 0 77 127 8 58 2.31e-13 68.6
MS.gene26002.t1 AT5G15310 70.000 40 12 0 88 127 9 48 4.38e-13 68.6
MS.gene26002.t1 AT1G22640 62.500 40 15 0 88 127 16 55 5.84e-13 67.0
MS.gene26002.t1 AT3G46130 51.852 54 24 1 73 124 4 57 1.47e-12 65.9
MS.gene26002.t1 AT5G59780 52.000 50 24 0 70 119 1 50 1.58e-12 65.5
MS.gene26002.t1 AT3G18100 29.078 141 85 5 13 147 497 628 1.07e-11 66.6
MS.gene26002.t1 AT3G18100 27.536 138 91 3 13 147 545 676 1.19e-11 66.2
MS.gene26002.t1 AT3G18100 29.078 141 85 5 13 147 384 515 1.43e-11 65.9
MS.gene26002.t1 AT3G18100 29.078 141 85 5 13 147 332 463 1.89e-11 65.5
MS.gene26002.t1 AT5G14340 35.870 92 57 1 88 179 10 99 2.30e-11 62.4
MS.gene26002.t1 AT1G74650 65.854 41 14 0 77 117 1 41 7.49e-11 62.0
MS.gene26002.t1 AT1G14350 34.043 94 57 1 56 144 23 116 9.17e-11 63.2
MS.gene26002.t1 AT1G14350 34.043 94 57 1 56 144 23 116 9.17e-11 63.2

Find 51 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCAAAGGAGAATTAAATT+TGG 0.218847 3.2:+68233035 None:intergenic
AAAAGCTTCTCATCTTCTTC+AGG 0.263770 3.2:+68233981 None:intergenic
TCTTCTGACAGTGACGTTAA+AGG 0.287115 3.2:+68232862 None:intergenic
TTCAATTACATAACCATGTT+TGG 0.314366 3.2:-68233960 MS.gene26002:CDS
TAATATTGATTCTCTTATAA+AGG 0.320611 3.2:-68233421 MS.gene26002:CDS
ATTAATCACTATAATATTAG+TGG 0.332071 3.2:-68233273 MS.gene26002:CDS
ATATTATTACCAGCTAGTTT+AGG 0.367192 3.2:+68233915 None:intergenic
CAATTTGAACAGAACCAGTT+TGG 0.373684 3.2:-68233138 MS.gene26002:CDS
TTCCAAATTTAATTCTCCTT+TGG 0.376200 3.2:-68233037 MS.gene26002:CDS
TTCATGAAGCACTTGGAAAT+AGG 0.380038 3.2:-68233682 MS.gene26002:intron
AACATTCCTCTCTTCAAATC+AGG 0.399385 3.2:+68233737 None:intergenic
TGCTTGAATTGGTTCCAAAC+TGG 0.411620 3.2:+68233124 None:intergenic
TTTGCTTTAAAGAACAGAAA+TGG 0.411738 3.2:+68234027 None:intergenic
AGAGAAGAAAGTGCTTGAAT+TGG 0.414379 3.2:+68233113 None:intergenic
TCATCAACAAGACAAGTTCA+TGG 0.452321 3.2:-68232933 MS.gene26002:CDS
AAAGCTTCTCATCTTCTTCA+GGG 0.470762 3.2:+68233982 None:intergenic
ATCTCATTATCTGTTCTCCC+TGG 0.474483 3.2:+68233525 None:intergenic
TACATAACCATGTTTGGTGT+TGG 0.474556 3.2:-68233954 MS.gene26002:CDS
CAAATTGCAGCACAATTACC+AGG 0.477311 3.2:-68233543 MS.gene26002:CDS
ATGCAGGTGGATTAATCTCA+TGG 0.478338 3.2:-68232969 MS.gene26002:CDS
TGAGATGGATCAACTATTTG+AGG 0.483337 3.2:-68233760 MS.gene26002:CDS
TCTTATGAATAAGCCAACAT+TGG 0.485974 3.2:-68233220 MS.gene26002:CDS
ATGAAGTGTTTATGAGTAGC+TGG 0.500962 3.2:+68233447 None:intergenic
TGTTCAAATTGTAATAGACT+TGG 0.511263 3.2:+68233150 None:intergenic
CCATGTTTGGTGTTGGATGT+TGG 0.512330 3.2:-68233947 MS.gene26002:CDS
AGTTCAGTTCCTAAACTAGC+TGG 0.517760 3.2:-68233924 MS.gene26002:intron
ATCAATCTTCATGAAGCACT+TGG 0.519187 3.2:-68233689 MS.gene26002:CDS
TTCTCTTATAAAGGAAGAGA+AGG 0.526947 3.2:-68233412 MS.gene26002:CDS
TTGAGGCCTGATTTGAAGAG+AGG 0.529236 3.2:-68233743 MS.gene26002:CDS
GACAGTGGCATTATCATCGA+TGG 0.531006 3.2:+68233384 None:intergenic
CCAACATCCAACACCAAACA+TGG 0.541756 3.2:+68233947 None:intergenic
AATGGATCAAAATCCAATGT+TGG 0.546744 3.2:+68233207 None:intergenic
ATGCTTAAATTGTAGTACAA+TGG 0.547362 3.2:+68233189 None:intergenic
ATTTCAGGGTTGCAAAGGTG+TGG 0.550921 3.2:-68233797 MS.gene26002:intron
AAATTATTTCAGGGTTGCAA+AGG 0.557540 3.2:-68233802 MS.gene26002:intron
TGCTTCTGAGTATTCTTGTG+AGG 0.558944 3.2:+68233314 None:intergenic
TGTGTAGCTAGAATTCTTTG+AGG 0.566060 3.2:+68233351 None:intergenic
AACATGATTAATGAAAATGC+AGG 0.582343 3.2:-68232985 MS.gene26002:CDS
GAAAGAGTTGTAGATTGAGA+TGG 0.584976 3.2:-68233775 MS.gene26002:CDS
TGCAGGTGGATTAATCTCAT+GGG 0.586240 3.2:-68232968 MS.gene26002:CDS
AGGAATGTTCTCAAAACAAG+AGG 0.587388 3.2:-68233723 MS.gene26002:CDS
ATGATTAATGAAAATGCAGG+TGG 0.597024 3.2:-68232982 MS.gene26002:CDS
AAGCTTCTCATCTTCTTCAG+GGG 0.607980 3.2:+68233983 None:intergenic
TAATTACTTTCATTCACCAA+AGG 0.610472 3.2:+68233021 None:intergenic
AAGAAGAAACTAATGAAACA+AGG 0.624080 3.2:-68233477 MS.gene26002:CDS
AACAAGACAAGTTCATGGCA+AGG 0.635618 3.2:-68232928 MS.gene26002:CDS
AGAAGAAACTAATGAAACAA+GGG 0.641105 3.2:-68233476 MS.gene26002:CDS
GGTGGATTAATCTCATGGGA+AGG 0.658836 3.2:-68232964 MS.gene26002:CDS
TGAGGTTGAGAGTGAGACAG+TGG 0.658988 3.2:+68233369 None:intergenic
AATTCTGAACTATTTAGACA+AGG 0.663276 3.2:+68233084 None:intergenic
AAATTGCAGCACAATTACCA+GGG 0.707909 3.2:-68233542 MS.gene26002:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAATCAAAATTATTTCA+GGG - chr3.2:68233040-68233059 MS.gene26002:CDS 10.0%
!! TTATTAATCAAAATTATTTC+AGG - chr3.2:68233039-68233058 MS.gene26002:CDS 10.0%
!! ATTAATCACTATAATATTAG+TGG - chr3.2:68233578-68233597 MS.gene26002:intron 15.0%
!!! ATAATGAGATAAAAAACTTT+TGG - chr3.2:68233339-68233358 MS.gene26002:CDS 15.0%
!!! TAATATTGATTCTCTTATAA+AGG - chr3.2:68233430-68233449 MS.gene26002:CDS 15.0%
!! AAAAACTAAGAAAAGGTTTA+TGG - chr3.2:68232844-68232863 MS.gene26002:CDS 20.0%
!! TTAAAGCAAAAACTAAGAAA+AGG - chr3.2:68232837-68232856 MS.gene26002:CDS 20.0%
!! TTAATAATTTCAAATGTCTC+AGG - chr3.2:68233279-68233298 MS.gene26002:CDS 20.0%
! AACATGATTAATGAAAATGC+AGG - chr3.2:68233866-68233885 MS.gene26002:intron 25.0%
! AAGAAGAAACTAATGAAACA+AGG - chr3.2:68233374-68233393 MS.gene26002:CDS 25.0%
! AATTCTGAACTATTTAGACA+AGG + chr3.2:68233770-68233789 None:intergenic 25.0%
! AGAAGAAACTAATGAAACAA+GGG - chr3.2:68233375-68233394 MS.gene26002:CDS 25.0%
! ATGCTTAAATTGTAGTACAA+TGG + chr3.2:68233665-68233684 None:intergenic 25.0%
! CGTTGTAAAGTAAAAAGATA+AGG + chr3.2:68233012-68233031 None:intergenic 25.0%
! TAATTACTTTCATTCACCAA+AGG + chr3.2:68233833-68233852 None:intergenic 25.0%
! TGTTCAAATTGTAATAGACT+TGG + chr3.2:68233704-68233723 None:intergenic 25.0%
! TTCAATTACATAACCATGTT+TGG - chr3.2:68232891-68232910 MS.gene26002:CDS 25.0%
! TTCCAAATTTAATTCTCCTT+TGG - chr3.2:68233814-68233833 MS.gene26002:intron 25.0%
!! ATATTATTACCAGCTAGTTT+AGG + chr3.2:68232939-68232958 None:intergenic 25.0%
!!! TTTGCTTTAAAGAACAGAAA+TGG + chr3.2:68232827-68232846 None:intergenic 25.0%
AAATTATTTCAGGGTTGCAA+AGG - chr3.2:68233049-68233068 MS.gene26002:CDS 30.0%
AATGGATCAAAATCCAATGT+TGG + chr3.2:68233647-68233666 None:intergenic 30.0%
ATAATTTCAAATGTCTCAGG+TGG - chr3.2:68233282-68233301 MS.gene26002:CDS 30.0%
ATGATTAATGAAAATGCAGG+TGG - chr3.2:68233869-68233888 MS.gene26002:intron 30.0%
CACCAAAGGAGAATTAAATT+TGG + chr3.2:68233819-68233838 None:intergenic 30.0%
TAATTTCAAATGTCTCAGGT+GGG - chr3.2:68233283-68233302 MS.gene26002:CDS 30.0%
TCTTATGAATAAGCCAACAT+TGG - chr3.2:68233631-68233650 MS.gene26002:intron 30.0%
TTCTCTTATAAAGGAAGAGA+AGG - chr3.2:68233439-68233458 MS.gene26002:CDS 30.0%
AAAAGCTTCTCATCTTCTTC+AGG + chr3.2:68232873-68232892 None:intergenic 35.0%
AAAGCTTCTCATCTTCTTCA+GGG + chr3.2:68232872-68232891 None:intergenic 35.0%
AAATTGCAGCACAATTACCA+GGG - chr3.2:68233309-68233328 MS.gene26002:CDS 35.0%
AACATTCCTCTCTTCAAATC+AGG + chr3.2:68233117-68233136 None:intergenic 35.0%
AGGAATGTTCTCAAAACAAG+AGG - chr3.2:68233128-68233147 MS.gene26002:CDS 35.0%
CAATTTGAACAGAACCAGTT+TGG - chr3.2:68233713-68233732 MS.gene26002:CDS 35.0%
GAAAGAGTTGTAGATTGAGA+TGG - chr3.2:68233076-68233095 MS.gene26002:CDS 35.0%
TCATCAACAAGACAAGTTCA+TGG - chr3.2:68233918-68233937 MS.gene26002:intron 35.0%
TGAGATGGATCAACTATTTG+AGG - chr3.2:68233091-68233110 MS.gene26002:CDS 35.0%
TGTGTAGCTAGAATTCTTTG+AGG + chr3.2:68233503-68233522 None:intergenic 35.0%
! ATCAATCTTCATGAAGCACT+TGG - chr3.2:68233162-68233181 MS.gene26002:CDS 35.0%
! ATGAAGTGTTTATGAGTAGC+TGG + chr3.2:68233407-68233426 None:intergenic 35.0%
! TTCATGAAGCACTTGGAAAT+AGG - chr3.2:68233169-68233188 MS.gene26002:CDS 35.0%
!! AGAGAAGAAAGTGCTTGAAT+TGG + chr3.2:68233741-68233760 None:intergenic 35.0%
!! TACATAACCATGTTTGGTGT+TGG - chr3.2:68232897-68232916 MS.gene26002:CDS 35.0%
AACAAGACAAGTTCATGGCA+AGG - chr3.2:68233923-68233942 MS.gene26002:intron 40.0%
AAGCTTCTCATCTTCTTCAG+GGG + chr3.2:68232871-68232890 None:intergenic 40.0%
AGTTCAGTTCCTAAACTAGC+TGG - chr3.2:68232927-68232946 MS.gene26002:CDS 40.0%
ATCTCATTATCTGTTCTCCC+TGG + chr3.2:68233329-68233348 None:intergenic 40.0%
CAAATTGCAGCACAATTACC+AGG - chr3.2:68233308-68233327 MS.gene26002:CDS 40.0%
TCTTCTGACAGTGACGTTAA+AGG + chr3.2:68233992-68234011 None:intergenic 40.0%
TGCTTCTGAGTATTCTTGTG+AGG + chr3.2:68233540-68233559 None:intergenic 40.0%
! TGCTTGAATTGGTTCCAAAC+TGG + chr3.2:68233730-68233749 None:intergenic 40.0%
!! ATGCAGGTGGATTAATCTCA+TGG - chr3.2:68233882-68233901 MS.gene26002:intron 40.0%
!! TGCAGGTGGATTAATCTCAT+GGG - chr3.2:68233883-68233902 MS.gene26002:intron 40.0%
ATTTCAGGGTTGCAAAGGTG+TGG - chr3.2:68233054-68233073 MS.gene26002:CDS 45.0%
CCAACATCCAACACCAAACA+TGG + chr3.2:68232907-68232926 None:intergenic 45.0%
GACAGTGGCATTATCATCGA+TGG + chr3.2:68233470-68233489 None:intergenic 45.0%
! TTGAGGCCTGATTTGAAGAG+AGG - chr3.2:68233108-68233127 MS.gene26002:CDS 45.0%
!! CCATGTTTGGTGTTGGATGT+TGG - chr3.2:68232904-68232923 MS.gene26002:CDS 45.0%
!! GGTGGATTAATCTCATGGGA+AGG - chr3.2:68233887-68233906 MS.gene26002:intron 45.0%
TGAGGTTGAGAGTGAGACAG+TGG + chr3.2:68233485-68233504 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 68232816 68234057 68232816 ID=MS.gene26002
chr3.2 mRNA 68232816 68234057 68232816 ID=MS.gene26002.t1;Parent=MS.gene26002
chr3.2 exon 68233925 68234057 68233925 ID=MS.gene26002.t1.exon1;Parent=MS.gene26002.t1
chr3.2 CDS 68233925 68234057 68233925 ID=cds.MS.gene26002.t1;Parent=MS.gene26002.t1
chr3.2 exon 68233683 68233812 68233683 ID=MS.gene26002.t1.exon2;Parent=MS.gene26002.t1
chr3.2 CDS 68233683 68233812 68233683 ID=cds.MS.gene26002.t1;Parent=MS.gene26002.t1
chr3.2 exon 68232816 68233572 68232816 ID=MS.gene26002.t1.exon3;Parent=MS.gene26002.t1
chr3.2 CDS 68232816 68233572 68232816 ID=cds.MS.gene26002.t1;Parent=MS.gene26002.t1
Gene Sequence

>MS.gene26002

ATGGGTCGCCATTTCTGTTCTTTAAAGCAAAAACTAAGAAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTTTTCAATTACATAACCATGTTTGGTGTTGGATGTTGGAGTTCAGTTCCTAAACTAGCTGGTAATAATATTAATATATATACTTACATATCAAGTTATCAGCATATGAAAGAAAAAAATTCCTTATCTTTTTACTTTACAACGTACTCTCTTATTAATCAAAATTATTTCAGGGTTGCAAAGGTGTGGAAAGAGTTGTAGATTGAGATGGATCAACTATTTGAGGCCTGATTTGAAGAGAGGAATGTTCTCAAAACAAGAGGAAGATCTTATTATCAATCTTCATGAAGCACTTGGAAATAGGTAACATATATATATTATGTACATTGAAGAATATATAAAGTTGTTAAATGTTCAAACATGTTATTGTTAAATAATGCTTCAAAAATGATTAATAATTTCAAATGTCTCAGGTGGGCTCAAATTGCAGCACAATTACCAGGGAGAACAGATAATGAGATAAAAAACTTTTGGAATTCAAGTTTGAAGAAGAAACTAATGAAACAAGGGATTGATCCAGCTACTCATAAACACTTCATCAATAATATTGATTCTCTTATAAAGGAAGAGAAGGAAAAACCATCGATGATAATGCCACTGTCTCACTCTCAACCTCAAAGAATTCTAGCTACACACTCAATGCTAGAATCCTCACAAGAATACTCAGAAGCACTTCTAATGAGTGATTTGATTAATCACTATAATATTAGTGGATTAGCTTTAACAGAAGCTTCAAGAAAAATTCTTATGAATAAGCCAACATTGGATTTTGATCCATTGTACTACAATTTAAGCATGAACAATTATTATCAGCCAAGTCTATTACAATTTGAACAGAACCAGTTTGGAACCAATTCAAGCACTTTCTTCTCTTCAATGCCTTGTCTAAATAGTTCAGAATTTTCAGACAATATCAACAACTCAGTTTCCAAATTTAATTCTCCTTTGGTGAATGAAAGTAATTATTATCAAATGAGCAACATGATTAATGAAAATGCAGGTGGATTAATCTCATGGGAAGGTGAAGAATTCATCAACAAGACAAGTTCATGGCAAGGACAGATGCTGAGTCATAATAATTCAATAGATTTCAGTACATATCCTTTAACGTCACTGTCAGAAGATCTAAGTAATATTGAAGCTAATTTTGATGTATTTCACCATTTATGA
Protein sequence

>MS.gene26002.t1

MGRHFCSLKQKLRKGLWSPEEDEKLFNYITMFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSKQEEDLIINLHEALGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLMKQGIDPATHKHFINNIDSLIKEEKEKPSMIMPLSHSQPQRILATHSMLESSQEYSEALLMSDLINHYNISGLALTEASRKILMNKPTLDFDPLYYNLSMNNYYQPSLLQFEQNQFGTNSSTFFSSMPCLNSSEFSDNINNSVSKFNSPLVNESNYYQMSNMINENAGGLISWEGEEFINKTSSWQGQMLSHNNSIDFSTYPLTSLSEDLSNIEANFDVFHHL