Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26011.t1 | AES78884.2 | 87.2 | 297 | 37 | 1 | 1 | 296 | 1 | 297 | 1.30E-145 | 525.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26011.t1 | Q8L3W1 | 27.7 | 328 | 174 | 8 | 2 | 279 | 22 | 336 | 2.4e-23 | 110.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26011.t1 | G7KVV7 | 87.2 | 297 | 37 | 1 | 1 | 296 | 1 | 297 | 9.4e-146 | 525.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26011.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26011.t1 | MTR_7g050590 | 87.205 | 297 | 37 | 1 | 1 | 296 | 1 | 297 | 0.0 | 527 |
| MS.gene26011.t1 | MTR_7g050560 | 75.085 | 293 | 55 | 4 | 1 | 292 | 28 | 303 | 2.66e-156 | 439 |
| MS.gene26011.t1 | MTR_7g050710 | 69.565 | 299 | 84 | 5 | 2 | 296 | 29 | 324 | 1.43e-148 | 419 |
| MS.gene26011.t1 | MTR_3g098790 | 70.707 | 297 | 78 | 4 | 1 | 296 | 28 | 316 | 8.42e-146 | 412 |
| MS.gene26011.t1 | MTR_7g050580 | 70.548 | 292 | 70 | 3 | 1 | 292 | 28 | 303 | 2.07e-145 | 411 |
| MS.gene26011.t1 | MTR_7g050720 | 62.712 | 295 | 94 | 8 | 1 | 281 | 25 | 317 | 1.11e-120 | 348 |
| MS.gene26011.t1 | MTR_1g035460 | 36.755 | 302 | 153 | 8 | 1 | 279 | 1 | 287 | 1.56e-52 | 177 |
| MS.gene26011.t1 | MTR_1g108780 | 36.949 | 295 | 152 | 11 | 2 | 279 | 13 | 290 | 7.93e-51 | 174 |
| MS.gene26011.t1 | MTR_8g103940 | 35.836 | 293 | 157 | 9 | 2 | 279 | 55 | 331 | 1.69e-46 | 163 |
| MS.gene26011.t1 | MTR_7g050640 | 69.767 | 86 | 26 | 0 | 1 | 86 | 28 | 113 | 7.94e-37 | 127 |
| MS.gene26011.t1 | MTR_5g044670 | 29.932 | 294 | 186 | 7 | 1 | 287 | 31 | 311 | 1.82e-36 | 133 |
| MS.gene26011.t1 | MTR_3g061320 | 32.374 | 278 | 163 | 8 | 2 | 278 | 26 | 279 | 2.51e-34 | 126 |
| MS.gene26011.t1 | MTR_3g061350 | 28.881 | 277 | 179 | 6 | 2 | 278 | 26 | 284 | 1.50e-31 | 119 |
| MS.gene26011.t1 | MTR_3g061370 | 29.242 | 277 | 178 | 6 | 2 | 278 | 23 | 281 | 5.25e-31 | 117 |
| MS.gene26011.t1 | MTR_3g061340 | 28.014 | 282 | 165 | 8 | 2 | 278 | 26 | 274 | 1.67e-27 | 108 |
| MS.gene26011.t1 | MTR_3g061310 | 30.249 | 281 | 171 | 9 | 2 | 278 | 26 | 285 | 2.38e-27 | 107 |
| MS.gene26011.t1 | MTR_1g035570 | 31.359 | 287 | 168 | 9 | 2 | 279 | 21 | 287 | 6.37e-25 | 103 |
| MS.gene26011.t1 | MTR_3g005420 | 30.142 | 282 | 149 | 8 | 2 | 282 | 305 | 539 | 3.38e-24 | 102 |
| MS.gene26011.t1 | MTR_3g005420 | 21.429 | 266 | 140 | 5 | 2 | 266 | 56 | 253 | 7.05e-14 | 72.0 |
| MS.gene26011.t1 | MTR_6g043890 | 28.938 | 273 | 173 | 10 | 2 | 265 | 31 | 291 | 1.14e-23 | 99.0 |
| MS.gene26011.t1 | MTR_5g070440 | 26.644 | 289 | 150 | 6 | 2 | 282 | 37 | 271 | 1.60e-23 | 97.4 |
| MS.gene26011.t1 | MTR_1g035640 | 29.787 | 282 | 168 | 9 | 2 | 277 | 21 | 278 | 2.04e-23 | 99.8 |
| MS.gene26011.t1 | MTR_1g021360 | 29.682 | 283 | 158 | 9 | 2 | 266 | 198 | 457 | 2.93e-23 | 99.4 |
| MS.gene26011.t1 | MTR_1g050845 | 28.929 | 280 | 156 | 7 | 2 | 277 | 25 | 265 | 5.68e-23 | 99.4 |
| MS.gene26011.t1 | MTR_1g035620 | 27.586 | 290 | 159 | 6 | 2 | 277 | 25 | 277 | 9.96e-23 | 97.4 |
| MS.gene26011.t1 | MTR_3g061330 | 29.787 | 188 | 120 | 2 | 2 | 189 | 26 | 201 | 1.76e-22 | 94.0 |
| MS.gene26011.t1 | MTR_1g021440 | 25.552 | 317 | 186 | 8 | 2 | 271 | 38 | 351 | 3.00e-22 | 95.9 |
| MS.gene26011.t1 | MTR_6g061070 | 28.333 | 300 | 182 | 10 | 1 | 278 | 33 | 321 | 7.04e-22 | 95.5 |
| MS.gene26011.t1 | MTR_4g119990 | 27.852 | 298 | 193 | 8 | 2 | 286 | 31 | 319 | 8.46e-22 | 94.4 |
| MS.gene26011.t1 | MTR_1g021270 | 25.000 | 312 | 183 | 7 | 2 | 266 | 31 | 338 | 1.05e-21 | 95.5 |
| MS.gene26011.t1 | MTR_3g005480 | 24.828 | 290 | 146 | 8 | 2 | 282 | 37 | 263 | 1.64e-21 | 91.7 |
| MS.gene26011.t1 | MTR_3g005490 | 26.207 | 290 | 141 | 8 | 2 | 282 | 37 | 262 | 2.06e-21 | 91.7 |
| MS.gene26011.t1 | MTR_3g061290 | 48.193 | 83 | 43 | 0 | 2 | 84 | 26 | 108 | 1.00e-20 | 88.2 |
| MS.gene26011.t1 | MTR_1g021380 | 25.817 | 306 | 173 | 8 | 2 | 271 | 37 | 324 | 7.70e-20 | 88.6 |
| MS.gene26011.t1 | MTR_1g021400 | 23.077 | 312 | 197 | 8 | 2 | 278 | 46 | 349 | 3.54e-18 | 84.0 |
| MS.gene26011.t1 | MTR_4g068320 | 39.583 | 96 | 56 | 1 | 2 | 97 | 22 | 115 | 4.00e-18 | 84.3 |
| MS.gene26011.t1 | MTR_4g068320 | 28.788 | 132 | 88 | 2 | 153 | 284 | 268 | 393 | 1.68e-12 | 67.8 |
| MS.gene26011.t1 | MTR_1g034240 | 40.964 | 83 | 49 | 0 | 2 | 84 | 23 | 105 | 5.26e-18 | 84.0 |
| MS.gene26011.t1 | MTR_1g034240 | 28.571 | 133 | 89 | 2 | 153 | 285 | 272 | 398 | 1.66e-12 | 67.8 |
| MS.gene26011.t1 | MTR_3g005460 | 24.658 | 292 | 160 | 9 | 2 | 282 | 278 | 520 | 8.63e-18 | 83.6 |
| MS.gene26011.t1 | MTR_3g005460 | 35.644 | 101 | 59 | 1 | 2 | 102 | 41 | 135 | 4.05e-16 | 78.6 |
| MS.gene26011.t1 | MTR_3g005440 | 30.894 | 123 | 83 | 2 | 2 | 124 | 36 | 156 | 4.67e-17 | 81.3 |
| MS.gene26011.t1 | MTR_3g005440 | 30.702 | 114 | 79 | 0 | 5 | 118 | 261 | 374 | 2.96e-11 | 63.9 |
| MS.gene26011.t1 | MTR_3g005495 | 35.238 | 105 | 63 | 1 | 2 | 106 | 29 | 128 | 5.72e-17 | 81.3 |
| MS.gene26011.t1 | MTR_3g005495 | 27.341 | 267 | 128 | 8 | 2 | 266 | 259 | 461 | 7.87e-17 | 80.9 |
| MS.gene26011.t1 | MTR_1g021350 | 25.862 | 290 | 184 | 8 | 2 | 271 | 37 | 315 | 9.53e-16 | 77.0 |
| MS.gene26011.t1 | MTR_1g035520 | 25.329 | 304 | 192 | 8 | 1 | 277 | 87 | 382 | 2.41e-15 | 75.9 |
| MS.gene26011.t1 | MTR_3g005420 | 21.429 | 266 | 140 | 5 | 2 | 266 | 37 | 234 | 7.63e-14 | 72.0 |
| MS.gene26011.t1 | MTR_1g035480 | 44.048 | 84 | 44 | 2 | 1 | 84 | 32 | 112 | 8.21e-14 | 68.9 |
| MS.gene26011.t1 | MTR_1g034210 | 37.349 | 83 | 50 | 1 | 2 | 84 | 23 | 103 | 1.78e-13 | 70.1 |
| MS.gene26011.t1 | MTR_3g061220 | 38.554 | 83 | 38 | 1 | 2 | 84 | 26 | 95 | 1.97e-13 | 66.2 |
| MS.gene26011.t1 | MTR_1g035510 | 42.857 | 84 | 45 | 2 | 1 | 84 | 1 | 81 | 2.13e-13 | 68.6 |
| MS.gene26011.t1 | MTR_1g034210 | 37.349 | 83 | 50 | 1 | 2 | 84 | 23 | 103 | 2.74e-13 | 69.7 |
| MS.gene26011.t1 | MTR_1g021320 | 36.000 | 75 | 48 | 0 | 2 | 76 | 198 | 272 | 5.54e-12 | 66.6 |
| MS.gene26011.t1 | MTR_1g021320 | 29.146 | 199 | 122 | 7 | 79 | 271 | 409 | 594 | 2.60e-11 | 64.7 |
| MS.gene26011.t1 | MTR_1g035500 | 41.667 | 84 | 46 | 2 | 1 | 84 | 40 | 120 | 6.21e-12 | 63.5 |
| MS.gene26011.t1 | MTR_1g035650 | 28.358 | 201 | 114 | 7 | 2 | 194 | 25 | 203 | 7.34e-12 | 63.9 |
| MS.gene26011.t1 | MTR_1g021440 | 36.000 | 75 | 48 | 0 | 2 | 76 | 38 | 112 | 2.58e-11 | 63.5 |
| MS.gene26011.t1 | MTR_1g021440 | 36.000 | 75 | 48 | 0 | 2 | 76 | 38 | 112 | 3.13e-11 | 63.2 |
| MS.gene26011.t1 | MTR_1g035490 | 34.711 | 121 | 72 | 4 | 161 | 279 | 81 | 196 | 3.25e-11 | 63.5 |
| MS.gene26011.t1 | MTR_1g033740 | 36.170 | 94 | 57 | 2 | 1 | 94 | 37 | 127 | 3.45e-11 | 61.6 |
| MS.gene26011.t1 | MTR_1g021290 | 34.177 | 79 | 52 | 0 | 2 | 80 | 171 | 249 | 4.03e-11 | 63.2 |
| MS.gene26011.t1 | MTR_1g021440 | 36.000 | 75 | 48 | 0 | 2 | 76 | 38 | 112 | 4.84e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26011.t1 | AT3G18990 | 28.097 | 331 | 175 | 10 | 2 | 282 | 22 | 339 | 5.35e-30 | 117 |
| MS.gene26011.t1 | AT3G18990 | 28.049 | 328 | 173 | 10 | 2 | 279 | 22 | 336 | 7.97e-30 | 115 |
| MS.gene26011.t1 | AT4G01580 | 45.455 | 88 | 48 | 0 | 2 | 89 | 46 | 133 | 2.43e-19 | 84.3 |
| MS.gene26011.t1 | AT4G33280 | 27.063 | 303 | 190 | 11 | 1 | 286 | 38 | 326 | 2.07e-18 | 84.3 |
| MS.gene26011.t1 | AT1G49475 | 44.186 | 86 | 47 | 1 | 2 | 87 | 50 | 134 | 2.30e-18 | 81.6 |
| MS.gene26011.t1 | AT3G18960 | 44.318 | 88 | 49 | 0 | 2 | 89 | 46 | 133 | 3.88e-18 | 80.9 |
| MS.gene26011.t1 | AT3G18960 | 44.318 | 88 | 49 | 0 | 2 | 89 | 46 | 133 | 4.84e-18 | 81.3 |
| MS.gene26011.t1 | AT3G18960 | 44.318 | 88 | 49 | 0 | 2 | 89 | 9 | 96 | 6.34e-18 | 80.1 |
Find 0 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAGTTACAATGAAATATA+TGG | - | 51855:8447-8466 | MS.gene26011:intron | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | - | 51855:7846-7865 | MS.gene26011:CDS | 20.0% |
| !!! | ACATTGTCTTTTCTTTTAAT+TGG | - | 51855:8970-8989 | MS.gene26011:CDS | 20.0% |
| !!! | TATTTTCAGGTGTTAAATAA+AGG | - | 51855:9056-9075 | MS.gene26011:CDS | 20.0% |
| ! | AGAAAGTTTGTAGAGAAATA+TGG | - | 51855:7768-7787 | MS.gene26011:CDS | 25.0% |
| ! | ATATAATCAAGAGTTGTTAG+AGG | - | 51855:8583-8602 | MS.gene26011:intron | 25.0% |
| ! | TAAAAAGTGATGGCAAAATA+TGG | - | 51855:7856-7875 | MS.gene26011:CDS | 25.0% |
| ! | TATTTCTCTACAAACTTTCT+TGG | + | 51855:7768-7787 | MS.gene26011:intergenic | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | + | 51855:9228-9247 | MS.gene26011:intergenic | 25.0% |
| ! | TGCAAAGTGGAAATTAAATT+TGG | - | 51855:7833-7852 | MS.gene26011:CDS | 25.0% |
| !! | GTCTTTAGATGTATATCTTT+TGG | + | 51855:7804-7823 | MS.gene26011:intergenic | 25.0% |
| !!! | ACTTAGTTGATTAGTTTGTT+AGG | - | 51855:8610-8629 | MS.gene26011:intron | 25.0% |
| AAATATGGTTTGAAAAGGGT+TGG | - | 51855:7871-7890 | MS.gene26011:CDS | 30.0% | |
| AAGACACAATCTTATACCTT+TGG | + | 51855:8219-8238 | MS.gene26011:intergenic | 30.0% | |
| AAGTATTTGAATAACGCTTG+AGG | - | 51855:8672-8691 | MS.gene26011:CDS | 30.0% | |
| AGGTGTTAAATAAAGGAGTT+TGG | - | 51855:9063-9082 | MS.gene26011:CDS | 30.0% | |
| AGTATTTGAATAACGCTTGA+GGG | - | 51855:8673-8692 | MS.gene26011:CDS | 30.0% | |
| AGTTGCAGCAAAAACTAATA+GGG | - | 51855:8022-8041 | MS.gene26011:CDS | 30.0% | |
| ATACATCTAAAGACTCCAAA+TGG | - | 51855:7810-7829 | MS.gene26011:CDS | 30.0% | |
| CTCTACTCTTTACTAGATTA+AGG | - | 51855:8496-8515 | MS.gene26011:intron | 30.0% | |
| GAAAGGGTAATTTATCTCTA+AGG | + | 51855:7997-8016 | MS.gene26011:intergenic | 30.0% | |
| GATATTTGAAAAGCAGAAGA+TGG | + | 51855:7932-7951 | MS.gene26011:intergenic | 30.0% | |
| GGCAAAATATGGTTTGAAAA+GGG | - | 51855:7867-7886 | MS.gene26011:CDS | 30.0% | |
| GTAAAGAGTAGAGAAAGATT+TGG | + | 51855:8489-8508 | MS.gene26011:intergenic | 30.0% | |
| TGCAAAATTGGAACACAATA+AGG | + | 51855:8304-8323 | MS.gene26011:intergenic | 30.0% | |
| TGGCAAAATATGGTTTGAAA+AGG | - | 51855:7866-7885 | MS.gene26011:CDS | 30.0% | |
| TGGTAATAGACACTTTGATT+TGG | - | 51855:9013-9032 | MS.gene26011:CDS | 30.0% | |
| TTTCAAATTGTAGTCCGTTA+CGG | + | 51855:9115-9134 | MS.gene26011:intergenic | 30.0% | |
| TTTGTAGAGAAATATGGAGA+AGG | - | 51855:7774-7793 | MS.gene26011:CDS | 30.0% | |
| ! | TAATCTTGATGTCACTTGTT+AGG | + | 51855:8853-8872 | MS.gene26011:intergenic | 30.0% |
| ! | TATTGTGTTCCAATTTTGCA+GGG | - | 51855:8304-8323 | MS.gene26011:intron | 30.0% |
| ! | TTATTGTGTTCCAATTTTGC+AGG | - | 51855:8303-8322 | MS.gene26011:intron | 30.0% |
| !! | GAGAGGAGATATTTATTTTC+AGG | - | 51855:9043-9062 | MS.gene26011:CDS | 30.0% |
| !! | TAGTTTGTTAGGTGATTGAT+AGG | - | 51855:8621-8640 | MS.gene26011:CDS | 30.0% |
| !! | TTTGATTTGGATAAGAAGAG+AGG | - | 51855:9026-9045 | MS.gene26011:CDS | 30.0% |
| AAAACTAATAGGGTCTCCAA+TGG | - | 51855:8032-8051 | MS.gene26011:CDS | 35.0% | |
| AATTTCCACTTTGCACCATT+TGG | + | 51855:7828-7847 | MS.gene26011:intergenic | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | - | 51855:8993-9012 | MS.gene26011:CDS | 35.0% | |
| GAGTTGCAGCAAAAACTAAT+AGG | - | 51855:8021-8040 | MS.gene26011:CDS | 35.0% | |
| GTTCAACTATGTATGCACTA+AGG | - | 51855:8551-8570 | MS.gene26011:intron | 35.0% | |
| TGTCTATTACCAAACATACG+TGG | + | 51855:9005-9024 | MS.gene26011:intergenic | 35.0% | |
| TTCAAATTGTAGTCCGTTAC+GGG | + | 51855:9114-9133 | MS.gene26011:intergenic | 35.0% | |
| TTTCATCAACCACGTGAAAT+TGG | - | 51855:8125-8144 | MS.gene26011:intron | 35.0% | |
| ! | GGACTACAATTTGAAATCAC+CGG | - | 51855:9119-9138 | MS.gene26011:CDS | 35.0% |
| ! | TAGAGCATCTCAAAAGAGAA+AGG | - | 51855:8088-8107 | MS.gene26011:intron | 35.0% |
| ! | TAGTTTTTGCTGCAACTCTT+TGG | + | 51855:8019-8038 | MS.gene26011:intergenic | 35.0% |
| !! | ACGTGGTTGATGAAATTCAA+AGG | + | 51855:8120-8139 | MS.gene26011:intergenic | 35.0% |
| !! | TTCCTGATAGAGTACTTTTC+AGG | + | 51855:9089-9108 | MS.gene26011:intergenic | 35.0% |
| !!! | AGCAGTAGTTGTTTTAGAGT+TGG | - | 51855:8149-8168 | MS.gene26011:intron | 35.0% |
| AAGGACCACAACTTGAAAGT+TGG | - | 51855:9161-9180 | MS.gene26011:CDS | 40.0% | |
| AGGTTTATTTCCTGGACCAT+TGG | + | 51855:8051-8070 | MS.gene26011:intergenic | 40.0% | |
| CACTTCTTTCCCTGCAAAAT+TGG | + | 51855:8316-8335 | MS.gene26011:intergenic | 40.0% | |
| GCTCTACAATGTTCATGACT+TGG | + | 51855:8074-8093 | MS.gene26011:intergenic | 40.0% | |
| TAGGATTGTCCATTTGAGCT+GGG | + | 51855:8834-8853 | MS.gene26011:intergenic | 40.0% | |
| TTAGGATTGTCCATTTGAGC+TGG | + | 51855:8835-8854 | MS.gene26011:intergenic | 40.0% | |
| TTGAATAACGCTTGAGGGAA+GGG | - | 51855:8678-8697 | MS.gene26011:CDS | 40.0% | |
| TTTGAATAACGCTTGAGGGA+AGG | - | 51855:8677-8696 | MS.gene26011:CDS | 40.0% | |
| ! | AATTTGAAATCACCGGTGGA+TGG | - | 51855:9126-9145 | MS.gene26011:CDS | 40.0% |
| ! | CTACAATGTTCATGACTTGG+AGG | + | 51855:8071-8090 | MS.gene26011:intergenic | 40.0% |
| ! | CTACAATTTGAAATCACCGG+TGG | - | 51855:9122-9141 | MS.gene26011:CDS | 40.0% |
| ! | TGACTTGGAGGTTTATTTCC+TGG | + | 51855:8059-8078 | MS.gene26011:intergenic | 40.0% |
| ! | TTGCTGCAACTCTTTGGAAA+GGG | + | 51855:8013-8032 | MS.gene26011:intergenic | 40.0% |
| ! | TTTGCTGCAACTCTTTGGAA+AGG | + | 51855:8014-8033 | MS.gene26011:intergenic | 40.0% |
| !! | CGTTGATCGTCATTTTCTAC+TGG | - | 51855:8425-8444 | MS.gene26011:intron | 40.0% |
| !! | TAGAGTTGGTAAACTGCAGA+AGG | - | 51855:8163-8182 | MS.gene26011:intron | 40.0% |
| !! | TGGATGGAAGGCATTTGTAA+AGG | - | 51855:9142-9161 | MS.gene26011:CDS | 40.0% |
| AGACTCCAAATGGTGCAAAG+TGG | - | 51855:7820-7839 | MS.gene26011:CDS | 45.0% | |
| ATTGCTCAACAGGGAACAGT+TGG | + | 51855:8807-8826 | MS.gene26011:intergenic | 45.0% | |
| CATACTGACAGAGAGTCCAA+AGG | - | 51855:8200-8219 | MS.gene26011:intron | 45.0% | |
| CGCATGACAACAACAAAGGA+TGG | + | 51855:8396-8415 | MS.gene26011:intergenic | 45.0% | |
| CTACTGCTTCCAATTTCACG+TGG | + | 51855:8137-8156 | MS.gene26011:intergenic | 45.0% | |
| TACAAATGCCTTCCATCCAC+CGG | + | 51855:9141-9160 | MS.gene26011:intergenic | 45.0% | |
| TCTATCAGGAAGACCCGTAA+CGG | - | 51855:9098-9117 | MS.gene26011:CDS | 45.0% | |
| TGAATAACGCTTGAGGGAAG+GGG | - | 51855:8679-8698 | MS.gene26011:CDS | 45.0% | |
| TGCACGCATGACAACAACAA+AGG | + | 51855:8400-8419 | MS.gene26011:intergenic | 45.0% | |
| ! | CAGGGAACAGTTGGTATCAA+CGG | + | 51855:8798-8817 | MS.gene26011:intergenic | 45.0% |
| ! | GAGTATCACTCTCTAGCTCA+TGG | - | 51855:7906-7925 | MS.gene26011:CDS | 45.0% |
| !! | CATCGCCAACTTTCAAGTTG+TGG | + | 51855:9169-9188 | MS.gene26011:intergenic | 45.0% |
| !! | GGCCTGAAAAGTACTCTATC+AGG | - | 51855:9084-9103 | MS.gene26011:CDS | 45.0% |
| AATAGGGTCTCCAATGGTCC+AGG | - | 51855:8038-8057 | MS.gene26011:CDS | 50.0% | |
| CTGGGCACAATTGCTCAACA+GGG | + | 51855:8816-8835 | MS.gene26011:intergenic | 50.0% | |
| GCAATTGTGCCCAGCTCAAA+TGG | - | 51855:8822-8841 | MS.gene26011:intron | 50.0% | |
| TGAAATCACCGGTGGATGGA+AGG | - | 51855:9130-9149 | MS.gene26011:CDS | 50.0% | |
| GCTGGGCACAATTGCTCAAC+AGG | + | 51855:8817-8836 | MS.gene26011:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51855 | gene | 7759 | 9301 | 7759 | ID=MS.gene26011 |
| 51855 | mRNA | 7759 | 9301 | 7759 | ID=MS.gene26011.t1;Parent=MS.gene26011 |
| 51855 | exon | 8839 | 9301 | 8839 | ID=MS.gene26011.t1.exon1;Parent=MS.gene26011.t1 |
| 51855 | CDS | 8839 | 9301 | 8839 | ID=cds.MS.gene26011.t1;Parent=MS.gene26011.t1 |
| 51855 | exon | 8614 | 8735 | 8614 | ID=MS.gene26011.t1.exon2;Parent=MS.gene26011.t1 |
| 51855 | CDS | 8614 | 8735 | 8614 | ID=cds.MS.gene26011.t1;Parent=MS.gene26011.t1 |
| 51855 | exon | 7759 | 8064 | 7759 | ID=MS.gene26011.t1.exon3;Parent=MS.gene26011.t1 |
| 51855 | CDS | 7759 | 8064 | 7759 | ID=cds.MS.gene26011.t1;Parent=MS.gene26011.t1 |
| Gene Sequence |
| Protein sequence |
