AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26044

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26044.t1 MTR_7g451170 87.136 412 52 1 1 411 1 412 0.0 741
MS.gene26044.t1 MTR_4g088015 71.845 412 115 1 1 411 31 442 0.0 555
MS.gene26044.t1 MTR_7g037260 68.392 367 107 2 45 411 1 358 4.71e-178 500
MS.gene26044.t1 MTR_7g037130 68.392 367 107 2 45 411 1 358 2.07e-176 496
MS.gene26044.t1 MTR_7g035350 49.554 448 166 7 1 394 1 442 1.80e-132 388
MS.gene26044.t1 MTR_1g057980 51.242 322 114 5 89 395 1 294 4.84e-101 302
MS.gene26044.t1 MTR_7g450950 46.218 357 157 9 32 385 13 337 1.65e-87 269
MS.gene26044.t1 MTR_3g077650 70.866 127 37 0 184 310 175 301 3.82e-57 194
MS.gene26044.t1 MTR_4g105660 68.033 122 39 0 189 310 179 300 1.35e-55 189
MS.gene26044.t1 MTR_5g070020 58.915 129 46 1 189 310 121 249 3.84e-51 176
MS.gene26044.t1 MTR_3g463400 60.000 135 47 2 189 317 132 265 4.10e-51 178
MS.gene26044.t1 MTR_5g049190 41.423 239 108 6 187 408 16 239 5.57e-49 166
MS.gene26044.t1 MTR_7g035300 39.147 258 93 7 153 410 39 232 5.33e-45 155
MS.gene26044.t1 MTR_7g061330 45.251 179 77 3 185 344 108 284 1.15e-39 149
MS.gene26044.t1 MTR_7g461410 45.251 179 77 3 185 344 108 284 1.15e-39 149
MS.gene26044.t1 MTR_7g061330 45.251 179 77 3 185 344 72 248 2.08e-39 148
MS.gene26044.t1 MTR_1g026870 55.963 109 47 1 185 292 80 188 1.29e-37 145
MS.gene26044.t1 MTR_3g110028 56.881 109 46 1 185 292 80 188 1.97e-37 145
MS.gene26044.t1 MTR_4g019370 54.902 102 46 0 188 289 36 137 1.37e-34 131
MS.gene26044.t1 MTR_5g010650 60.417 96 38 0 189 284 109 204 1.66e-34 134
MS.gene26044.t1 MTR_3g101290 49.515 103 52 0 187 289 34 136 3.28e-32 122
MS.gene26044.t1 MTR_4g094982 52.427 103 49 0 187 289 2 104 3.42e-32 123
MS.gene26044.t1 MTR_5g016510 52.427 103 49 0 187 289 2 104 7.27e-31 120
MS.gene26044.t1 MTR_5g082910 54.000 100 46 0 187 286 16 115 3.71e-30 118
MS.gene26044.t1 MTR_0008s0470 40.714 140 75 4 190 325 15 150 5.63e-27 109
MS.gene26044.t1 MTR_0008s0390 43.548 124 66 3 190 309 15 138 8.35e-27 108
MS.gene26044.t1 MTR_2g089450 45.946 111 59 1 190 299 14 124 1.62e-26 107
MS.gene26044.t1 MTR_3g052450 40.458 131 77 1 160 289 12 142 1.65e-26 111
MS.gene26044.t1 MTR_6g015455 50.000 100 50 0 187 286 2 101 2.40e-26 112
MS.gene26044.t1 MTR_6g074860 44.762 105 58 0 190 294 4 108 2.43e-26 106
MS.gene26044.t1 MTR_5g041570 46.018 113 56 1 190 297 134 246 5.81e-26 109
MS.gene26044.t1 MTR_0251s0050 46.602 103 53 2 190 290 15 117 5.93e-26 106
MS.gene26044.t1 MTR_5g029840 46.535 101 53 1 190 289 14 114 1.03e-25 107
MS.gene26044.t1 MTR_2g064160 43.564 101 56 1 190 289 13 113 1.51e-25 105
MS.gene26044.t1 MTR_3g052430 47.115 104 54 1 187 289 40 143 2.16e-25 108
MS.gene26044.t1 MTR_4g082040 46.000 100 54 0 190 289 105 204 2.74e-25 107
MS.gene26044.t1 MTR_4g478180 49.515 103 50 2 190 290 15 117 2.85e-25 105
MS.gene26044.t1 MTR_2g089420 42.857 112 61 2 190 298 13 124 4.03e-25 107
MS.gene26044.t1 MTR_4g063100 46.729 107 56 1 190 295 9 115 4.97e-25 103
MS.gene26044.t1 MTR_6g027370 47.525 101 53 0 189 289 98 198 5.99e-25 105
MS.gene26044.t1 MTR_4g073420 49.091 110 52 2 190 298 14 120 7.16e-25 103
MS.gene26044.t1 MTR_8g095390 44.828 116 58 3 180 293 8 119 7.42e-25 103
MS.gene26044.t1 MTR_1g021230 45.690 116 55 2 190 304 59 167 9.34e-25 105
MS.gene26044.t1 MTR_6g027340 44.000 100 56 0 190 289 16 115 1.17e-24 100
MS.gene26044.t1 MTR_8g031360 49.057 106 47 3 190 290 15 118 1.60e-24 102
MS.gene26044.t1 MTR_3g011610 37.908 153 77 3 142 292 7 143 1.87e-24 105
MS.gene26044.t1 MTR_4g029540 37.419 155 82 5 190 331 12 164 2.02e-24 102
MS.gene26044.t1 MTR_1g062940 36.066 183 99 6 190 358 8 186 2.44e-24 100
MS.gene26044.t1 MTR_3g077110 42.574 101 57 1 190 289 14 114 2.65e-24 103
MS.gene26044.t1 MTR_1g112760 42.574 101 57 1 190 289 15 115 2.67e-24 100
MS.gene26044.t1 MTR_2g011660 46.535 101 53 1 190 289 15 115 2.93e-24 103
MS.gene26044.t1 MTR_8g042410 50.000 106 49 3 190 292 39 143 3.72e-24 104
MS.gene26044.t1 MTR_1g073170 45.872 109 53 2 190 297 22 125 3.79e-24 100
MS.gene26044.t1 MTR_7g096930 44.828 116 60 3 190 302 14 128 3.92e-24 101
MS.gene26044.t1 MTR_1g085040 45.631 103 54 2 190 290 14 116 4.34e-24 102
MS.gene26044.t1 MTR_5g007370 45.631 103 54 2 190 290 14 116 4.83e-24 101
MS.gene26044.t1 MTR_4g100720 47.423 97 50 1 190 285 15 111 6.54e-24 97.8
MS.gene26044.t1 MTR_2g089620 46.535 101 53 1 190 289 14 114 7.01e-24 101
MS.gene26044.t1 MTR_4g091490 45.545 101 54 1 190 289 15 115 7.29e-24 102
MS.gene26044.t1 MTR_2g096380 47.273 110 56 2 190 298 8 116 8.71e-24 99.4
MS.gene26044.t1 MTR_8g017440 40.594 101 59 1 190 289 14 114 8.85e-24 101
MS.gene26044.t1 MTR_3g028740 45.161 124 60 3 175 290 3 126 9.20e-24 101
MS.gene26044.t1 MTR_6g027360 40.000 115 69 0 175 289 63 177 1.09e-23 100
MS.gene26044.t1 MTR_4g102380 46.602 103 53 2 190 290 14 116 1.31e-23 99.8
MS.gene26044.t1 MTR_3g097450 47.170 106 54 2 190 293 14 119 1.32e-23 100
MS.gene26044.t1 MTR_1g085640 44.340 106 57 2 190 293 14 119 1.35e-23 101
MS.gene26044.t1 MTR_7g110830 33.333 213 112 8 190 391 14 207 1.41e-23 101
MS.gene26044.t1 MTR_8g006470 47.573 103 52 2 190 290 12 114 1.85e-23 99.8
MS.gene26044.t1 MTR_2g097910 46.602 103 53 2 190 290 22 124 1.87e-23 100
MS.gene26044.t1 MTR_3g089045 48.000 100 52 0 190 289 16 115 1.90e-23 99.8
MS.gene26044.t1 MTR_7g035075 45.545 101 54 1 184 283 10 110 1.93e-23 97.8
MS.gene26044.t1 MTR_3g074520 29.670 182 108 4 190 362 14 184 1.96e-23 100
MS.gene26044.t1 MTR_8g027345 49.485 97 48 1 190 285 14 110 2.20e-23 99.8
MS.gene26044.t1 MTR_1g045610 48.421 95 48 1 190 283 23 117 2.52e-23 98.6
MS.gene26044.t1 MTR_7g117730 46.789 109 54 2 190 297 14 119 2.52e-23 98.6
MS.gene26044.t1 MTR_8g017540 40.594 101 59 1 190 289 60 160 2.65e-23 100
MS.gene26044.t1 MTR_6g009430 32.941 170 98 3 187 340 11 180 2.71e-23 100
MS.gene26044.t1 MTR_4g105130 43.137 102 55 2 190 289 14 114 3.16e-23 100
MS.gene26044.t1 MTR_7g076740 45.370 108 52 3 190 292 14 119 3.39e-23 99.4
MS.gene26044.t1 MTR_2g099740 40.594 101 59 1 190 289 14 114 4.23e-23 100
MS.gene26044.t1 MTR_0197s0010 40.496 121 66 4 193 308 6 125 4.48e-23 97.1
MS.gene26044.t1 MTR_4g082290 45.631 103 54 2 190 290 14 116 4.71e-23 100
MS.gene26044.t1 MTR_5g078140 46.602 103 53 2 190 290 14 116 5.32e-23 99.0
MS.gene26044.t1 MTR_7g086960 39.860 143 75 2 156 289 48 188 5.80e-23 99.8
MS.gene26044.t1 MTR_4g065017 46.602 103 53 2 190 290 19 121 7.57e-23 99.0
MS.gene26044.t1 MTR_5g010020 46.392 97 51 1 190 285 14 110 8.95e-23 98.6
MS.gene26044.t1 MTR_7g111290 46.875 96 50 1 190 284 14 109 9.48e-23 99.4
MS.gene26044.t1 MTR_4g125520 46.392 97 51 1 190 285 14 110 9.51e-23 98.2
MS.gene26044.t1 MTR_8g017500 39.604 101 60 1 190 289 14 114 1.26e-22 98.6
MS.gene26044.t1 MTR_8g098860 45.370 108 55 2 182 285 3 110 1.46e-22 97.8
MS.gene26044.t1 MTR_5g079670 44.554 101 55 1 190 289 13 113 1.62e-22 95.1
MS.gene26044.t1 MTR_5g088640 45.631 103 54 2 190 290 14 116 1.64e-22 96.7
MS.gene26044.t1 MTR_7g115650 44.330 97 51 2 190 284 14 109 1.73e-22 95.1
MS.gene26044.t1 MTR_5g062790 45.631 103 54 2 190 290 11 113 1.78e-22 97.4
MS.gene26044.t1 MTR_5g088080 45.631 103 54 2 190 290 14 116 1.95e-22 96.3
MS.gene26044.t1 MTR_5g088150 45.631 103 54 2 190 290 14 116 1.95e-22 96.3
MS.gene26044.t1 MTR_5g488210 45.631 103 54 2 190 290 14 116 1.95e-22 96.3
MS.gene26044.t1 MTR_5g488170 45.631 103 54 2 190 290 14 116 2.21e-22 95.5
MS.gene26044.t1 MTR_4g082230 45.631 103 54 2 190 290 14 116 2.39e-22 98.6
MS.gene26044.t1 MTR_3g065440 45.631 103 54 2 190 290 14 116 2.42e-22 97.1
MS.gene26044.t1 MTR_7g011170 45.631 103 54 2 190 290 14 116 3.27e-22 96.7
MS.gene26044.t1 MTR_3g461490 42.308 104 59 1 187 289 11 114 3.62e-22 96.7
MS.gene26044.t1 MTR_2g067420 47.573 103 52 2 185 285 10 112 4.06e-22 96.7
MS.gene26044.t1 MTR_8g017350 42.157 102 57 2 190 289 14 115 4.82e-22 99.0
MS.gene26044.t1 MTR_8g017340 42.157 102 57 2 190 289 14 115 5.11e-22 98.2
MS.gene26044.t1 MTR_6g006030 44.554 101 55 1 184 283 10 110 5.26e-22 93.6
MS.gene26044.t1 MTR_4g485530 43.564 101 56 1 190 289 14 114 5.43e-22 93.2
MS.gene26044.t1 MTR_5g042030 46.602 103 53 2 190 290 9 111 5.44e-22 95.5
MS.gene26044.t1 MTR_1g043050 34.302 172 101 4 190 359 14 175 6.38e-22 94.7
MS.gene26044.t1 MTR_1g043080 44.660 103 55 2 190 290 14 116 1.18e-21 94.0
MS.gene26044.t1 MTR_8g020490 42.308 104 58 2 184 285 3 106 1.45e-21 93.6
MS.gene26044.t1 MTR_8g017390 39.216 102 60 2 190 289 14 115 1.49e-21 96.7
MS.gene26044.t1 MTR_4g121460 43.564 101 56 1 190 289 14 114 2.05e-21 94.7
MS.gene26044.t1 MTR_1g110460 39.516 124 72 3 184 305 21 143 2.07e-21 94.4
MS.gene26044.t1 MTR_1g100653 45.833 96 51 1 190 284 14 109 2.27e-21 94.0
MS.gene26044.t1 MTR_5g088610 44.118 102 55 2 190 289 11 112 4.44e-21 94.0
MS.gene26044.t1 MTR_6g012690 44.660 103 55 2 190 290 14 116 6.53e-21 93.6
MS.gene26044.t1 MTR_2g034790 42.574 101 57 1 190 289 14 114 7.35e-21 93.2
MS.gene26044.t1 MTR_1g076150 43.269 104 57 2 190 291 14 117 8.30e-21 91.7
MS.gene26044.t1 MTR_1g017000 39.844 128 66 3 190 315 14 132 9.04e-21 91.3
MS.gene26044.t1 MTR_1g083630 44.554 101 55 1 190 289 14 114 1.63e-20 94.4
MS.gene26044.t1 MTR_0008s0280 41.237 97 56 1 190 285 14 110 1.74e-20 90.1
MS.gene26044.t1 MTR_2g088170 38.255 149 74 3 190 337 31 162 2.95e-20 92.8
MS.gene26044.t1 MTR_8g468380 41.121 107 56 1 193 299 25 124 3.11e-20 92.4
MS.gene26044.t1 MTR_5g078860 35.032 157 95 3 190 344 9 160 3.52e-20 90.9
MS.gene26044.t1 MTR_7g010210 41.026 117 65 3 190 304 14 128 3.58e-20 90.9
MS.gene26044.t1 MTR_0063s0090 42.268 97 55 1 190 285 14 110 5.18e-20 88.6
MS.gene26044.t1 MTR_7g010210 41.026 117 65 3 190 304 14 128 5.66e-20 89.4
MS.gene26044.t1 MTR_5g038910 41.237 97 57 0 193 289 29 125 5.70e-20 92.0
MS.gene26044.t1 MTR_0001s0360 34.286 140 85 2 190 328 9 142 6.35e-20 89.0
MS.gene26044.t1 MTR_5g038910 44.944 89 49 0 193 281 29 117 9.74e-20 90.5
MS.gene26044.t1 MTR_6g090405 41.176 102 58 2 190 289 14 115 1.00e-19 88.6
MS.gene26044.t1 MTR_7g017260 35.862 145 77 4 190 328 27 161 1.17e-19 88.6
MS.gene26044.t1 MTR_3g083540 40.000 110 62 2 190 298 43 149 1.39e-19 89.0
MS.gene26044.t1 MTR_0140s0030 38.655 119 64 4 190 304 15 128 1.62e-19 89.4
MS.gene26044.t1 MTR_0489s0020 38.655 119 64 4 190 304 15 128 1.62e-19 89.4
MS.gene26044.t1 MTR_5g078800 33.758 157 97 3 190 344 9 160 1.69e-19 88.2
MS.gene26044.t1 MTR_1g100667 37.719 114 70 1 181 293 6 119 1.71e-19 88.2
MS.gene26044.t1 MTR_3g103570 43.119 109 59 3 190 295 14 122 1.96e-19 89.4
MS.gene26044.t1 MTR_5g079290 39.604 101 60 1 190 289 19 119 3.07e-19 87.4
MS.gene26044.t1 MTR_5g014990 41.818 110 60 3 190 295 14 123 4.19e-19 87.8
MS.gene26044.t1 MTR_5g078930 34.868 152 91 3 190 339 11 156 4.49e-19 85.9
MS.gene26044.t1 MTR_5g078910 39.604 101 60 1 190 289 9 109 5.04e-19 87.4
MS.gene26044.t1 MTR_1g017140 38.462 117 68 3 190 302 14 130 5.52e-19 87.8
MS.gene26044.t1 MTR_4g128190 43.810 105 46 3 190 293 13 105 6.74e-19 85.9
MS.gene26044.t1 MTR_6g012180 42.708 96 54 1 190 284 14 109 9.20e-19 87.0
MS.gene26044.t1 MTR_1g008970 55.405 74 32 1 213 285 113 186 9.63e-19 85.5
MS.gene26044.t1 MTR_6g055910 38.889 108 65 1 190 296 16 123 9.64e-19 86.3
MS.gene26044.t1 MTR_1g086510 38.739 111 67 1 174 283 7 117 1.01e-18 85.9
MS.gene26044.t1 MTR_7g111290 56.452 62 27 0 223 284 6 67 1.67e-18 86.3
MS.gene26044.t1 MTR_1g086530 42.105 95 54 1 190 283 35 129 1.97e-18 85.1
MS.gene26044.t1 MTR_5g078950 38.000 100 61 1 190 288 9 108 2.09e-18 84.7
MS.gene26044.t1 MTR_5g079120 36.567 134 77 3 159 289 35 163 2.11e-18 85.5
MS.gene26044.t1 MTR_4g097570 41.837 98 54 2 190 284 14 111 2.37e-18 85.1
MS.gene26044.t1 MTR_7g087130 42.308 104 58 2 190 291 14 117 2.61e-18 85.9
MS.gene26044.t1 MTR_4g128670 43.878 98 53 2 190 285 14 111 2.98e-18 85.9
MS.gene26044.t1 MTR_5g079220 37.736 106 65 1 190 294 23 128 3.09e-18 84.7
MS.gene26044.t1 MTR_2g095520 41.837 98 55 2 190 285 14 111 3.97e-18 85.1
MS.gene26044.t1 MTR_3g039990 40.594 101 59 1 190 289 15 115 5.11e-18 84.7
MS.gene26044.t1 MTR_4g063100 45.122 82 43 1 216 295 5 86 8.02e-18 82.4
MS.gene26044.t1 MTR_4g057635 40.566 106 60 3 190 292 14 119 9.78e-18 84.0
MS.gene26044.t1 MTR_8g060940 40.000 95 56 1 190 283 9 103 1.10e-17 82.4
MS.gene26044.t1 MTR_4g097570 41.237 97 55 2 190 284 14 110 1.79e-17 82.8
MS.gene26044.t1 MTR_2g033170 43.158 95 53 1 190 283 26 120 4.59e-17 82.0
MS.gene26044.t1 MTR_0247s0040 39.000 100 60 1 190 288 9 108 7.77e-17 78.6
MS.gene26044.t1 MTR_6g055910 41.667 84 47 1 215 296 11 94 7.87e-17 80.1
MS.gene26044.t1 MTR_7g102110 38.095 105 63 2 187 289 11 115 9.31e-17 80.1
MS.gene26044.t1 MTR_2g096380 45.882 85 43 2 216 298 14 97 2.00e-16 78.2
MS.gene26044.t1 MTR_7g109320 46.392 97 51 1 190 285 14 110 3.52e-16 79.7
MS.gene26044.t1 MTR_7g061550 33.898 118 73 2 190 304 7 122 4.59e-16 79.3
MS.gene26044.t1 MTR_0193s0090 37.624 101 62 1 190 289 9 109 1.20e-15 75.9
MS.gene26044.t1 MTR_4g123040 39.252 107 64 1 190 295 26 132 2.92e-15 76.6
MS.gene26044.t1 MTR_6g080360 42.553 94 53 1 190 283 530 622 6.90e-14 74.3
MS.gene26044.t1 MTR_6g080360 34.343 99 64 1 185 283 474 571 9.36e-13 70.5
MS.gene26044.t1 MTR_6g080360 42.553 94 53 1 190 283 310 402 1.26e-13 73.2
MS.gene26044.t1 MTR_6g080360 37.778 90 55 1 185 274 254 342 1.70e-12 69.7
MS.gene26044.t1 MTR_3g045430 32.653 98 65 1 193 289 18 115 2.51e-13 70.5
MS.gene26044.t1 MTR_1g085880 39.394 99 58 2 193 289 17 115 1.14e-12 67.0
MS.gene26044.t1 MTR_1g085770 39.394 99 58 2 193 289 17 115 1.80e-12 68.2
MS.gene26044.t1 MTR_7g115550 35.484 93 58 2 191 282 8 99 9.34e-12 67.4
MS.gene26044.t1 MTR_5g007300 40.000 75 44 1 190 263 66 140 1.01e-11 62.8
MS.gene26044.t1 MTR_7g115550 35.484 93 58 2 191 282 8 99 1.13e-11 67.4
MS.gene26044.t1 MTR_5g010470 36.170 94 56 2 190 282 7 97 5.28e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26044.t1 AT4G18770 68.852 122 38 0 189 310 216 337 4.61e-56 191
MS.gene26044.t1 AT3G27785 54.545 176 71 4 147 314 143 317 1.11e-53 184
MS.gene26044.t1 AT5G58850 46.561 189 94 2 112 300 34 215 1.45e-50 176
MS.gene26044.t1 AT5G40360 52.941 153 69 2 165 314 132 284 4.63e-48 167
MS.gene26044.t1 AT5G11050 61.667 120 44 1 180 297 93 212 2.88e-47 167
MS.gene26044.t1 AT3G09370 60.000 105 42 0 185 289 130 234 4.18e-39 147
MS.gene26044.t1 AT3G09370 60.000 105 42 0 185 289 125 229 4.19e-39 147
MS.gene26044.t1 AT3G09370 60.000 105 42 0 185 289 138 242 6.54e-39 146
MS.gene26044.t1 AT2G25230 51.587 126 59 1 169 294 7 130 2.20e-38 138
MS.gene26044.t1 AT5G11510 55.046 109 48 1 185 292 76 184 3.40e-38 147
MS.gene26044.t1 AT5G11510 55.046 109 48 1 185 292 76 184 3.40e-38 147
MS.gene26044.t1 AT5G11510 55.046 109 48 1 185 292 76 184 3.40e-38 147
MS.gene26044.t1 AT5G11510 55.046 109 48 1 185 292 76 184 4.43e-38 146
MS.gene26044.t1 AT5G11510 55.046 109 48 1 185 292 76 184 4.70e-38 146
MS.gene26044.t1 AT5G02320 58.095 105 44 0 185 289 122 226 2.46e-37 142
MS.gene26044.t1 AT5G02320 58.095 105 44 0 185 289 122 226 2.46e-37 142
MS.gene26044.t1 AT5G02320 58.095 105 44 0 185 289 62 166 2.77e-37 141
MS.gene26044.t1 AT4G32730 53.211 109 50 1 185 292 82 190 2.53e-35 139
MS.gene26044.t1 AT4G32730 53.211 109 50 1 185 292 82 190 2.53e-35 139
MS.gene26044.t1 AT4G32730 53.211 109 50 1 185 292 82 190 2.53e-35 139
MS.gene26044.t1 AT4G32730 53.211 109 50 1 185 292 82 190 2.53e-35 139
MS.gene26044.t1 AT4G32730 53.211 109 50 1 185 292 82 190 3.19e-35 138
MS.gene26044.t1 AT5G40430 47.794 136 68 2 190 323 54 188 6.69e-35 130
MS.gene26044.t1 AT3G55730 49.558 113 57 0 187 299 53 165 5.84e-31 122
MS.gene26044.t1 AT3G09230 51.456 103 50 0 187 289 52 154 2.36e-30 120
MS.gene26044.t1 AT4G00540 50.833 120 50 3 180 290 88 207 3.68e-30 120
MS.gene26044.t1 AT4G00540 36.893 103 56 2 190 283 46 148 4.79e-13 70.9
MS.gene26044.t1 AT4G37260 51.402 107 52 0 183 289 6 112 8.02e-30 118
MS.gene26044.t1 AT4G00540 50.833 120 50 3 180 290 86 205 9.88e-30 120
MS.gene26044.t1 AT4G00540 36.893 103 56 2 190 283 44 146 7.89e-13 70.1
MS.gene26044.t1 AT2G23290 50.467 107 53 0 183 289 6 112 1.12e-28 114
MS.gene26044.t1 AT5G67300 45.536 112 61 0 187 298 3 114 7.22e-28 112
MS.gene26044.t1 AT1G57560 35.678 199 107 5 190 377 14 202 8.46e-28 112
MS.gene26044.t1 AT3G50060 45.631 103 56 0 187 289 3 105 1.03e-27 111
MS.gene26044.t1 AT1G17950 38.095 147 86 2 190 333 5 149 3.39e-27 108
MS.gene26044.t1 AT4G33450 43.548 124 66 1 178 301 7 126 6.70e-27 108
MS.gene26044.t1 AT3G11440 48.571 105 52 2 190 292 43 147 7.63e-27 112
MS.gene26044.t1 AT4G38620 40.523 153 87 2 190 341 14 163 1.16e-26 108
MS.gene26044.t1 AT5G17800 37.113 194 98 6 190 375 93 270 1.42e-26 109
MS.gene26044.t1 AT3G28470 47.000 100 52 1 187 285 11 110 2.12e-26 108
MS.gene26044.t1 AT3G11440 48.571 105 52 2 190 292 43 147 2.22e-26 111
MS.gene26044.t1 AT3G11440 48.571 105 52 2 190 292 43 147 2.22e-26 111
MS.gene26044.t1 AT3G11440 48.571 105 52 2 190 292 43 147 2.22e-26 111
MS.gene26044.t1 AT1G69560 41.803 122 71 0 190 311 107 228 2.70e-26 108
MS.gene26044.t1 AT1G69560 41.803 122 71 0 190 311 123 244 2.81e-26 108
MS.gene26044.t1 AT2G26960 50.980 102 49 1 190 290 22 123 3.52e-26 109
MS.gene26044.t1 AT2G39880 43.519 108 61 0 187 294 47 154 5.01e-26 108
MS.gene26044.t1 AT4G09460 33.981 206 106 5 190 394 14 190 1.71e-25 103
MS.gene26044.t1 AT1G26780 48.000 100 52 0 190 289 98 197 2.12e-25 105
MS.gene26044.t1 AT5G14750 39.552 134 78 2 190 322 18 149 2.98e-25 102
MS.gene26044.t1 AT1G26780 48.000 100 52 0 190 289 98 197 3.16e-25 105
MS.gene26044.t1 AT5G06100 46.667 105 54 2 190 292 34 138 3.49e-25 107
MS.gene26044.t1 AT4G28110 47.525 101 52 1 190 289 14 114 3.71e-25 104
MS.gene26044.t1 AT4G26930 45.098 102 55 1 190 290 21 122 3.78e-25 106
MS.gene26044.t1 AT3G29020 43.478 115 60 1 190 304 65 174 3.89e-25 103
MS.gene26044.t1 AT5G55020 46.078 102 54 1 190 290 28 129 4.59e-25 107
MS.gene26044.t1 AT3G29020 43.478 115 60 1 190 304 67 176 5.99e-25 104
MS.gene26044.t1 AT5G06100 46.667 105 54 2 190 292 34 138 6.71e-25 107
MS.gene26044.t1 AT5G06100 46.667 105 54 2 190 292 34 138 6.71e-25 107
MS.gene26044.t1 AT5G06100 46.667 105 54 2 190 292 34 138 6.71e-25 107
MS.gene26044.t1 AT5G06100 46.667 105 54 2 190 292 34 138 6.71e-25 107
MS.gene26044.t1 AT2G32460 47.525 101 52 1 190 289 20 120 7.13e-25 106
MS.gene26044.t1 AT2G32460 47.525 101 52 1 190 289 8 108 8.49e-25 106
MS.gene26044.t1 AT1G22640 49.515 103 50 2 190 290 14 116 1.01e-24 102
MS.gene26044.t1 AT4G01680 41.429 140 76 3 190 326 14 150 1.31e-24 103
MS.gene26044.t1 AT5G59780 46.789 109 56 2 190 297 10 117 1.46e-24 101
MS.gene26044.t1 AT2G26950 44.037 109 52 2 190 293 18 122 1.52e-24 104
MS.gene26044.t1 AT1G09540 44.545 110 57 2 190 298 14 120 1.99e-24 103
MS.gene26044.t1 AT4G01680 41.429 140 76 3 190 326 14 150 1.99e-24 101
MS.gene26044.t1 AT4G21440 48.515 101 51 1 190 289 14 114 2.20e-24 103
MS.gene26044.t1 AT1G57560 33.862 189 85 5 190 377 14 163 2.48e-24 102
MS.gene26044.t1 AT3G46130 47.706 109 55 2 190 297 11 118 2.75e-24 101
MS.gene26044.t1 AT3G27920 42.478 113 62 2 174 285 2 112 3.34e-24 100
MS.gene26044.t1 AT4G01680 38.816 152 75 3 190 326 14 162 4.09e-24 102
MS.gene26044.t1 AT3G12720 42.574 101 57 1 190 289 24 124 4.31e-24 102
MS.gene26044.t1 AT3G61250 48.544 103 51 2 190 290 14 116 4.45e-24 101
MS.gene26044.t1 AT5G26660 36.306 157 94 4 190 342 14 168 4.86e-24 102
MS.gene26044.t1 AT4G05100 46.535 101 53 1 190 289 15 115 5.15e-24 102
MS.gene26044.t1 AT5G12870 48.544 103 51 2 190 290 20 122 5.68e-24 100
MS.gene26044.t1 AT1G74430 44.340 106 58 1 190 294 14 119 6.72e-24 100
MS.gene26044.t1 AT5G40330 45.361 97 52 1 190 285 14 110 1.05e-23 98.6
MS.gene26044.t1 AT5G16770 47.525 101 52 1 190 289 14 114 1.67e-23 100
MS.gene26044.t1 AT5G16770 47.525 101 52 1 190 289 14 114 1.67e-23 100
MS.gene26044.t1 AT3G13890 40.594 101 59 1 190 289 14 114 1.70e-23 101
MS.gene26044.t1 AT3G13890 38.182 110 58 1 190 289 14 123 2.42e-23 100
MS.gene26044.t1 AT5G16770 47.525 101 52 1 190 289 14 114 2.50e-23 100
MS.gene26044.t1 AT5G16770 47.525 101 52 1 190 289 14 114 2.50e-23 100
MS.gene26044.t1 AT3G24310 41.525 118 68 1 190 306 20 137 2.76e-23 99.0
MS.gene26044.t1 AT5G10280 45.631 103 54 2 190 290 14 116 3.08e-23 100
MS.gene26044.t1 AT2G16720 48.148 108 50 3 190 293 14 119 3.60e-23 98.6
MS.gene26044.t1 AT3G30210 36.306 157 96 2 190 342 29 185 3.72e-23 98.6
MS.gene26044.t1 AT2G47190 42.857 112 63 1 173 283 5 116 5.54e-23 98.2
MS.gene26044.t1 AT4G22680 45.631 103 54 2 190 290 14 116 6.35e-23 97.8
MS.gene26044.t1 AT4G13480 48.421 95 48 1 190 283 8 102 6.63e-23 97.4
MS.gene26044.t1 AT5G07690 46.078 102 54 1 190 290 14 115 8.00e-23 99.0
MS.gene26044.t1 AT1G35515 44.545 110 57 2 190 298 14 120 8.00e-23 96.3
MS.gene26044.t1 AT1G66230 46.154 104 52 3 190 290 14 116 8.86e-23 97.8
MS.gene26044.t1 AT5G54230 46.602 103 53 2 190 290 14 116 8.95e-23 98.6
MS.gene26044.t1 AT4G12350 44.660 103 55 2 190 290 14 116 8.96e-23 97.8
MS.gene26044.t1 AT1G18570 48.113 106 53 2 190 293 15 120 1.08e-22 98.6
MS.gene26044.t1 AT5G07700 46.602 103 53 2 190 290 14 116 1.21e-22 98.6
MS.gene26044.t1 AT5G07700 46.602 103 53 2 190 290 14 116 1.21e-22 98.6
MS.gene26044.t1 AT3G02940 46.535 101 53 1 190 289 14 114 1.81e-22 97.4
MS.gene26044.t1 AT2G31180 39.655 116 69 1 190 304 14 129 1.83e-22 95.9
MS.gene26044.t1 AT5G61420 46.602 103 53 2 190 290 14 116 1.97e-22 98.2
MS.gene26044.t1 AT5G35550 44.554 101 55 1 190 289 16 116 2.43e-22 95.9
MS.gene26044.t1 AT5G65230 44.660 103 55 2 190 290 14 116 2.54e-22 97.1
MS.gene26044.t1 AT3G02940 46.535 101 53 1 190 289 14 114 2.67e-22 97.1
MS.gene26044.t1 AT3G02940 46.535 101 53 1 190 289 14 114 2.67e-22 97.1
MS.gene26044.t1 AT4G34990 47.573 103 52 2 190 290 14 116 2.69e-22 96.3
MS.gene26044.t1 AT3G08500 44.860 107 57 2 186 290 28 134 3.46e-22 97.1
MS.gene26044.t1 AT3G23250 42.609 115 62 3 190 301 14 127 3.82e-22 95.9
MS.gene26044.t1 AT1G73410 46.000 100 54 0 190 289 6 105 4.20e-22 94.7
MS.gene26044.t1 AT3G48920 43.333 120 64 3 172 289 3 120 4.52e-22 95.1
MS.gene26044.t1 AT1G73410 46.000 100 54 0 190 289 6 105 4.95e-22 93.6
MS.gene26044.t1 AT3G60460 44.660 103 55 2 190 290 13 115 7.31e-22 95.5
MS.gene26044.t1 AT3G13540 41.584 101 58 1 190 289 25 125 7.69e-22 94.4
MS.gene26044.t1 AT1G56160 44.037 109 58 3 185 290 10 118 7.86e-22 95.5
MS.gene26044.t1 AT3G53200 42.373 118 64 3 184 299 5 120 7.99e-22 94.0
MS.gene26044.t1 AT5G56110 43.519 108 59 2 187 292 11 118 9.52e-22 95.5
MS.gene26044.t1 AT5G52600 40.517 116 67 2 190 303 14 129 1.07e-21 92.8
MS.gene26044.t1 AT3G01530 44.554 101 55 1 190 289 27 127 1.35e-21 92.4
MS.gene26044.t1 AT1G25340 47.423 97 50 1 188 283 18 114 1.43e-21 94.4
MS.gene26044.t1 AT1G63910 45.361 97 52 1 190 285 14 110 1.45e-21 95.9
MS.gene26044.t1 AT1G34670 42.574 101 57 1 190 289 14 114 1.76e-21 95.5
MS.gene26044.t1 AT1G74080 43.396 106 59 1 190 294 14 119 1.78e-21 95.1
MS.gene26044.t1 AT3G27810 46.316 95 50 1 190 283 22 116 2.11e-21 92.4
MS.gene26044.t1 AT1G06180 44.660 103 55 2 190 290 14 116 3.10e-21 92.4
MS.gene26044.t1 AT1G25340 46.875 96 47 1 188 283 18 109 3.78e-21 93.2
MS.gene26044.t1 AT5G60890 46.226 106 55 2 190 293 14 119 4.53e-21 93.2
MS.gene26044.t1 AT3G01140 44.660 103 55 2 190 290 14 116 5.19e-21 94.0
MS.gene26044.t1 AT5G26660 35.616 146 78 4 200 342 5 137 5.53e-21 93.2
MS.gene26044.t1 AT1G79180 45.192 104 53 3 190 290 16 118 5.69e-21 92.8
MS.gene26044.t1 AT4G17785 41.584 101 58 1 190 289 15 115 6.73e-21 93.6
MS.gene26044.t1 AT4G17785 41.584 101 58 1 190 289 15 115 7.42e-21 93.6
MS.gene26044.t1 AT5G40350 45.263 95 51 1 190 283 19 113 7.67e-21 90.5
MS.gene26044.t1 AT1G25340 46.875 96 47 1 188 283 18 109 8.22e-21 92.8
MS.gene26044.t1 AT3G01140 44.660 103 55 2 190 290 57 159 8.57e-21 94.0
MS.gene26044.t1 AT5G15310 43.689 103 56 2 190 290 14 116 1.37e-20 92.4
MS.gene26044.t1 AT1G16490 42.056 107 58 3 190 293 16 121 1.44e-20 91.3
MS.gene26044.t1 AT5G15310 43.689 103 56 2 190 290 14 116 1.62e-20 92.0
MS.gene26044.t1 AT1G68320 44.211 95 52 1 190 283 21 115 1.81e-20 91.3
MS.gene26044.t1 AT5G15310 43.689 103 56 2 190 290 14 116 1.82e-20 90.5
MS.gene26044.t1 AT3G62610 45.361 97 52 1 190 285 14 110 2.27e-20 92.0
MS.gene26044.t1 AT5G57620 42.202 109 60 3 190 295 14 122 2.34e-20 91.7
MS.gene26044.t1 AT5G62320 44.545 110 52 3 190 290 15 124 3.69e-20 89.4
MS.gene26044.t1 AT5G39700 41.346 104 61 0 191 294 57 160 3.91e-20 88.2
MS.gene26044.t1 AT1G66370 43.299 97 54 1 190 285 10 106 5.10e-20 89.0
MS.gene26044.t1 AT5G62470 37.931 116 71 1 190 304 14 129 5.19e-20 90.9
MS.gene26044.t1 AT4G37780 39.837 123 68 4 190 309 14 133 5.61e-20 90.1
MS.gene26044.t1 AT5G65790 43.363 113 60 3 187 295 11 123 6.34e-20 91.3
MS.gene26044.t1 AT2G47460 42.574 101 57 1 190 289 14 114 9.25e-20 90.5
MS.gene26044.t1 AT5G14340 42.157 102 56 2 190 289 26 126 9.71e-20 89.0
MS.gene26044.t1 AT4G25560 42.268 97 55 1 190 285 12 108 1.13e-19 89.0
MS.gene26044.t1 AT1G14350 37.190 121 73 2 193 310 28 148 1.18e-19 90.9
MS.gene26044.t1 AT1G14350 37.190 121 73 2 193 310 28 148 1.18e-19 90.9
MS.gene26044.t1 AT5G16600 45.192 104 53 3 190 290 14 116 1.22e-19 89.7
MS.gene26044.t1 AT1G18710 39.623 106 62 2 190 293 14 119 2.50e-19 87.8
MS.gene26044.t1 AT5G14750 39.000 100 59 1 223 322 18 115 5.58e-19 84.3
MS.gene26044.t1 AT3G49690 41.593 113 62 3 187 295 11 123 7.76e-19 87.0
MS.gene26044.t1 AT5G49330 42.268 97 55 1 190 285 14 110 8.23e-19 87.4
MS.gene26044.t1 AT3G47600 41.748 103 58 2 190 290 14 116 9.35e-19 87.0
MS.gene26044.t1 AT1G48000 43.158 95 53 1 190 283 34 128 1.32e-18 85.1
MS.gene26044.t1 AT5G23000 42.157 102 57 2 190 289 14 115 1.42e-18 86.7
MS.gene26044.t1 AT1G08810 34.932 146 88 3 190 333 14 154 1.64e-18 85.5
MS.gene26044.t1 AT1G74650 42.718 103 57 2 190 290 14 116 1.72e-18 86.3
MS.gene26044.t1 AT5G62470 37.607 117 71 2 190 304 14 130 1.76e-18 86.7
MS.gene26044.t1 AT3G28910 43.810 105 55 3 190 291 14 117 1.92e-18 85.9
MS.gene26044.t1 AT3G12820 40.179 112 65 2 185 294 10 121 4.03e-18 83.6
MS.gene26044.t1 AT5G35550 48.684 76 37 1 216 289 44 119 4.27e-18 84.0
MS.gene26044.t1 AT2G02820 39.560 91 55 0 193 283 33 123 6.67e-18 85.9
MS.gene26044.t1 AT2G02820 39.560 91 55 0 193 283 33 123 9.01e-18 85.5
MS.gene26044.t1 AT2G02820 39.560 91 55 0 193 283 33 123 1.60e-17 83.6
MS.gene26044.t1 AT1G79180 36.029 136 52 4 190 290 16 151 1.90e-17 83.2
MS.gene26044.t1 AT5G52260 39.130 115 67 2 188 300 12 125 3.20e-17 81.6
MS.gene26044.t1 AT3G53200 49.351 77 38 1 223 299 12 87 9.29e-17 79.0
MS.gene26044.t1 AT3G27810 54.098 61 28 0 223 283 7 67 1.51e-16 77.4
MS.gene26044.t1 AT1G66380 42.708 96 54 1 190 284 10 105 1.72e-16 76.3
MS.gene26044.t1 AT5G59780 48.000 75 38 1 223 297 23 96 1.92e-16 78.2
MS.gene26044.t1 AT3G18100 41.489 94 55 0 190 283 546 639 2.06e-16 82.0
MS.gene26044.t1 AT3G18100 39.000 100 59 2 185 283 490 588 5.76e-15 77.4
MS.gene26044.t1 AT3G18100 41.489 94 55 0 190 283 498 591 2.64e-16 81.6
MS.gene26044.t1 AT3G18100 39.000 100 59 2 185 283 442 540 7.59e-15 77.0
MS.gene26044.t1 AT5G49620 37.903 124 72 2 161 283 3 122 2.71e-16 79.7
MS.gene26044.t1 AT3G12820 48.611 72 37 0 223 294 2 73 3.19e-16 77.0
MS.gene26044.t1 AT3G18100 41.489 94 55 0 190 283 385 478 3.66e-16 80.9
MS.gene26044.t1 AT3G18100 39.000 100 59 2 185 283 329 427 1.13e-14 76.6
MS.gene26044.t1 AT3G18100 41.489 94 55 0 190 283 333 426 4.11e-16 80.9
MS.gene26044.t1 AT3G18100 39.000 100 59 2 185 283 277 375 1.19e-14 76.3
MS.gene26044.t1 AT3G46130 48.000 75 38 1 223 297 23 96 4.20e-16 77.8
MS.gene26044.t1 AT3G46130 48.000 75 38 1 223 297 13 86 5.66e-16 77.0
MS.gene26044.t1 AT1G56650 41.237 97 56 1 190 285 10 106 5.89e-16 77.4
MS.gene26044.t1 AT3G06490 42.105 95 54 1 190 283 21 115 9.47e-16 78.2
MS.gene26044.t1 AT5G40350 52.459 61 29 0 223 283 8 68 9.56e-16 75.1
MS.gene26044.t1 AT2G36890 40.367 109 62 3 187 292 11 119 1.32e-15 77.4
MS.gene26044.t1 AT1G66390 42.708 96 54 1 190 284 10 105 1.63e-15 76.3
MS.gene26044.t1 AT2G36890 40.367 109 62 3 187 292 52 160 1.92e-15 77.4
MS.gene26044.t1 AT1G22640 58.621 58 23 1 234 290 2 59 2.68e-15 74.7
MS.gene26044.t1 AT2G37630 35.537 121 75 1 192 309 6 126 2.77e-15 77.4
MS.gene26044.t1 AT3G47600 47.826 69 35 1 223 290 42 110 1.94e-14 74.3
MS.gene26044.t1 AT5G14750 35.955 89 55 1 234 322 2 88 6.49e-14 68.9
MS.gene26044.t1 AT5G14750 35.955 89 55 1 234 322 2 88 6.49e-14 68.9
MS.gene26044.t1 AT1G71030 40.625 64 38 0 226 289 5 68 4.11e-13 67.8
MS.gene26044.t1 AT5G49620 34.058 138 72 3 161 283 3 136 4.38e-13 70.1
MS.gene26044.t1 AT1G71030 40.625 64 38 0 226 289 19 82 4.73e-13 68.2
MS.gene26044.t1 AT3G23250 44.928 69 37 1 234 301 2 70 2.11e-12 66.6
MS.gene26044.t1 AT1G14350 33.962 106 54 3 208 310 13 105 8.11e-12 67.0
MS.gene26044.t1 AT1G14350 33.962 106 54 3 208 310 13 105 8.11e-12 67.0
MS.gene26044.t1 AT1G09770 35.484 93 58 2 191 282 8 99 1.31e-11 67.0
MS.gene26044.t1 AT1G66380 47.619 63 33 0 223 285 11 73 6.41e-11 59.7

Find 108 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCTGAGCTTTCAAAATT+TGG 0.042476 7.4:-53984847 None:intergenic
TAACACTAGCAAAGGAATTT+TGG 0.152151 7.4:+53981917 MS.gene26044:CDS
GAATCCTCTTCAGCCGCTTT+TGG 0.192256 7.4:-53982133 None:intergenic
GTATGTCTTCCATCTTATTA+TGG 0.265624 7.4:-53981884 None:intergenic
TCCAATTGGTGGATCACTTT+GGG 0.286919 7.4:+53982382 MS.gene26044:CDS
TAAGTTGAGTGCACTGATTT+TGG 0.290593 7.4:-53981692 None:intergenic
AATTATGAGTTTGGATCATA+TGG 0.312481 7.4:+53984979 MS.gene26044:CDS
AGATCAATTTCTTGCTTAAG+AGG 0.316151 7.4:-53985024 None:intergenic
GGTTCTTCCTCTTGGCATTT+AGG 0.324518 7.4:-53984705 None:intergenic
TACCGATTGGCTGGGATCAT+AGG 0.328430 7.4:-53981789 None:intergenic
CATTGTCCCTTGATTTGATT+AGG 0.334812 7.4:-53982185 None:intergenic
GGCATTTAGGCGGCGCTTAG+TGG 0.335034 7.4:-53984692 None:intergenic
CTATCATGCAATGATGGAAT+TGG 0.335430 7.4:+53982068 MS.gene26044:CDS
TCTTCCATCTTATTATGGTT+TGG 0.336573 7.4:-53981879 None:intergenic
TGGAACATACCTACAAATTT+CGG 0.353979 7.4:-53984905 None:intergenic
ACCACAATGAATTATGAGTT+TGG 0.360754 7.4:+53984970 MS.gene26044:CDS
GGTGATAGAGAGGGACTTAC+CGG 0.362616 7.4:-53981987 None:intergenic
TCTACTTCTGAAATACATAA+TGG 0.377911 7.4:+53984750 MS.gene26044:CDS
CTACAGAGACCGAAATTTGT+AGG 0.385609 7.4:+53984896 MS.gene26044:CDS
TTGTAGGGTTCTTGTCCAAT+TGG 0.386156 7.4:+53982368 MS.gene26044:intron
CCATCTTCGACCAGACATTA+AGG 0.395516 7.4:+53982479 MS.gene26044:CDS
AAATCAGTGCACTCAACTTA+AGG 0.406941 7.4:+53981695 MS.gene26044:CDS
GATCATAGGGAATGGGTTGA+TGG 0.412841 7.4:-53981775 None:intergenic
CTTACCCCGGTTCTTCCTCT+TGG 0.419409 7.4:-53984713 None:intergenic
GTCCAATTGGTGGATCACTT+TGG 0.421631 7.4:+53982381 MS.gene26044:CDS
AAATTCCTTTGCTAGTGTTA+AGG 0.422850 7.4:-53981914 None:intergenic
ATCACTTTGGGCTAAGAAAA+TGG 0.428054 7.4:+53982394 MS.gene26044:CDS
TAAATGCCAAGAGGAAGAAC+CGG 0.428642 7.4:+53984707 MS.gene26044:CDS
GTAGCCTTGTACCGATTGGC+TGG 0.429943 7.4:-53981798 None:intergenic
AAGTTTATGAAAGGAAGAAT+TGG 0.434545 7.4:+53982429 MS.gene26044:CDS
TCATCACCATTGAACATCAT+TGG 0.435028 7.4:-53984925 None:intergenic
GTGGTTCTTGATACAGTTAT+CGG 0.436683 7.4:-53984662 None:intergenic
CTTATTATGGTTTGGTGCAA+AGG 0.441532 7.4:-53981871 None:intergenic
TAGGGTTCTTGTCCAATTGG+TGG 0.446482 7.4:+53982371 MS.gene26044:intron
TCAATTAATCCTGAGCTTCA+AGG 0.447008 7.4:+53982041 MS.gene26044:CDS
CATAGGGAATGGGTTGATGG+GGG 0.452078 7.4:-53981772 None:intergenic
GCCCAAAGTGATCCACCAAT+TGG 0.461579 7.4:-53982383 None:intergenic
GAAATTTCAAGAAGATTGCC+AGG 0.467461 7.4:+53984634 MS.gene26044:CDS
TCATAGGGAATGGGTTGATG+GGG 0.470069 7.4:-53981773 None:intergenic
GATGGAATGGCAAGTGGATC+TGG 0.471586 7.4:+53984946 MS.gene26044:CDS
TAAGCAAGAAATTGATCTCA+TGG 0.473623 7.4:+53985029 MS.gene26044:CDS
ATCATAGGGAATGGGTTGAT+GGG 0.475991 7.4:-53981774 None:intergenic
CAAGGATCCTAATCAAATCA+AGG 0.479925 7.4:+53982178 MS.gene26044:CDS
GATAGATGTCCTTGAAGCTC+AGG 0.483878 7.4:-53982050 None:intergenic
CAATGCTAAGGAAGTTGAAA+AGG 0.493311 7.4:+53984780 MS.gene26044:CDS
TGGTGAAACTTCACAACCTC+CGG 0.502115 7.4:+53981968 MS.gene26044:CDS
ATAATGGTTCCTTCTCAACT+AGG 0.506235 7.4:+53981627 None:intergenic
AAGAATGAGACCTTAATGTC+TGG 0.513472 7.4:-53982489 None:intergenic
CGTATTGCTAAGTTTATGAA+AGG 0.517758 7.4:+53982420 MS.gene26044:CDS
ACCGATTGGCTGGGATCATA+GGG 0.518832 7.4:-53981788 None:intergenic
GGACATCTATCATGCAATGA+TGG 0.521532 7.4:+53982062 MS.gene26044:CDS
ACAAGGCTACTCACACCAAT+GGG 0.525641 7.4:+53981811 MS.gene26044:CDS
ATGATGTTCAATGGTGATGA+TGG 0.528337 7.4:+53984928 MS.gene26044:CDS
CCTTAATGTCTGGTCGAAGA+TGG 0.530232 7.4:-53982479 None:intergenic
GTGCCCAAAAGCGGCTGAAG+AGG 0.530335 7.4:+53982129 MS.gene26044:CDS
TCCCTATGATCCCAGCCAAT+CGG 0.532240 7.4:+53981787 MS.gene26044:CDS
GTGATGGTTAGCCTCATTCA+AGG 0.534181 7.4:-53981724 None:intergenic
TTCCCTTTGAACTCTTACCC+CGG 0.540518 7.4:-53984726 None:intergenic
ATTGAAGCTCACAAAACAGT+TGG 0.541332 7.4:+53984598 MS.gene26044:CDS
AAATCCCGAGAAAATGATCA+AGG 0.547568 7.4:+53982095 MS.gene26044:CDS
AGATTTGAACCTAGTTGAGA+AGG 0.550181 7.4:-53981636 None:intergenic
TGCACCAAACCATAATAAGA+TGG 0.552990 7.4:+53981875 MS.gene26044:CDS
AAATGCCAAGAGGAAGAACC+GGG 0.554441 7.4:+53984708 MS.gene26044:CDS
TGAGTTTGGATCATATGGAA+TGG 0.555173 7.4:+53984984 MS.gene26044:CDS
ATACAGTTATCGGTGCGCCC+TGG 0.556713 7.4:-53984652 None:intergenic
GATCCCAGCCAATCGGTACA+AGG 0.559254 7.4:+53981794 MS.gene26044:CDS
AAATTCTCTCTGATACCCAT+TGG 0.560239 7.4:-53981826 None:intergenic
TGGCTGGGATCATAGGGAAT+GGG 0.560756 7.4:-53981782 None:intergenic
AACCGGGGTAAGAGTTCAAA+GGG 0.562064 7.4:+53984724 MS.gene26044:CDS
CTAATCAAATCAAGGGACAA+TGG 0.563071 7.4:+53982186 MS.gene26044:CDS
TTGGCTGGGATCATAGGGAA+TGG 0.563619 7.4:-53981783 None:intergenic
GGCGCTTAGTGGCATTCCAG+TGG 0.563856 7.4:-53984681 None:intergenic
TATGTTCCAATGATGTTCAA+TGG 0.564980 7.4:+53984919 MS.gene26044:CDS
GACGTATTCTACGAGCATGA+TGG 0.566078 7.4:+53984810 MS.gene26044:CDS
TACAAGGCTACTCACACCAA+TGG 0.568722 7.4:+53981810 MS.gene26044:CDS
GAAAACAGTGCAGAGAGAGA+TGG 0.572643 7.4:+53982451 MS.gene26044:CDS
AATGGAAGTCACCAATGCTA+AGG 0.573363 7.4:+53984768 MS.gene26044:CDS
TAAGGAACATCCCTTGAATG+AGG 0.585109 7.4:+53981713 MS.gene26044:CDS
AGCTAGTGATGGTGATAGAG+AGG 0.585984 7.4:-53981997 None:intergenic
ATAACTGTATCAAGAACCAC+TGG 0.587796 7.4:+53984665 MS.gene26044:CDS
GAACCGGGGTAAGAGTTCAA+AGG 0.590922 7.4:+53984723 MS.gene26044:CDS
ACAAAACAGTTGGAAACAAG+TGG 0.591819 7.4:+53984608 MS.gene26044:CDS
TAGCCTTGTACCGATTGGCT+GGG 0.595235 7.4:-53981797 None:intergenic
TACAAATATGTGGTGTGTGA+TGG 0.595663 7.4:-53981669 None:intergenic
TCGTGCTCAGTGCCCAAAAG+CGG 0.606665 7.4:+53982120 MS.gene26044:CDS
GAAGGATGCATGGACTGAAG+AGG 0.608291 7.4:+53984561 MS.gene26044:intron
TATGATTGCAGAAGGATGCA+TGG 0.609027 7.4:+53984551 MS.gene26044:intron
GTTCAATGGTGATGATGGAA+TGG 0.611388 7.4:+53984933 MS.gene26044:CDS
GGGACAATGGACTTCAAATG+AGG 0.612328 7.4:+53982199 MS.gene26044:CDS
AAGGATCCTAATCAAATCAA+GGG 0.616665 7.4:+53982179 MS.gene26044:CDS
GGTCGCCTTAACACTAGCAA+AGG 0.621057 7.4:+53981909 MS.gene26044:CDS
GCTAGTGATGGTGATAGAGA+GGG 0.625596 7.4:-53981996 None:intergenic
TGATGGTTAGCCTCATTCAA+GGG 0.632215 7.4:-53981723 None:intergenic
AATAAGATGGAAGACATACA+TGG 0.632344 7.4:+53981888 MS.gene26044:CDS
GTGAGTAGCCTTGTACCGAT+TGG 0.636096 7.4:-53981802 None:intergenic
GGTGATGATGGAATGGCAAG+TGG 0.637638 7.4:+53984940 MS.gene26044:CDS
GGATGCATGGACTGAAGAGG+AGG 0.642594 7.4:+53984564 MS.gene26044:CDS
AATGGACTTCAAATGAGGAT+CGG 0.644601 7.4:+53982204 MS.gene26044:CDS
AAATTTCAAGAAGATTGCCA+GGG 0.649002 7.4:+53984635 MS.gene26044:CDS
GAATAATGAAATTCAACACA+AGG 0.657330 7.4:+53982160 MS.gene26044:CDS
TCCAAACTCATAATTCATTG+TGG 0.657863 7.4:-53984971 None:intergenic
ATGCTCGTAGAATACGTCAT+CGG 0.676177 7.4:-53984805 None:intergenic
TCTTCCTCTTGGCATTTAGG+CGG 0.677072 7.4:-53984702 None:intergenic
TATGTGGTGTGTGATGGTGA+AGG 0.681997 7.4:-53981663 None:intergenic
TGTGCATCATAAGCTAGTGA+TGG 0.682566 7.4:-53982008 None:intergenic
GATAGAGAGGGACTTACCGG+AGG 0.706969 7.4:-53981984 None:intergenic
AGCGCCGCCTAAATGCCAAG+AGG 0.709993 7.4:+53984698 MS.gene26044:CDS
AATGCCAAGAGGAAGAACCG+GGG 0.791379 7.4:+53984709 MS.gene26044:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGTTTTATATTTTTGTA+GGG + chr7.4:53982353-53982372 MS.gene26044:intron 10.0%
!!! TAATTGTTTTATATTTTTGT+AGG + chr7.4:53982352-53982371 MS.gene26044:intron 10.0%
!!! TCTTTATCTATTTTTAATTT+TGG + chr7.4:53983356-53983375 MS.gene26044:intron 10.0%
!!! TGTTTTTAATTAATATTTGA+GGG + chr7.4:53983001-53983020 MS.gene26044:intron 10.0%
!! AAAAGTAACATATTTATCAT+CGG - chr7.4:53982925-53982944 None:intergenic 15.0%
!! AACACTTATAAATAAAACTT+AGG - chr7.4:53982985-53983004 None:intergenic 15.0%
!! GTAAAAATCAAATATGTTAA+GGG - chr7.4:53982605-53982624 None:intergenic 15.0%
!! TAGTTTAATAAACATTTCAT+TGG + chr7.4:53982757-53982776 MS.gene26044:intron 15.0%
!! TGTAAAAATCAAATATGTTA+AGG - chr7.4:53982606-53982625 None:intergenic 15.0%
!! TTGTTTAATATCTAATATTG+AGG + chr7.4:53983310-53983329 MS.gene26044:intron 15.0%
!!! ACAATTTTATATAATCAATG+TGG - chr7.4:53983465-53983484 None:intergenic 15.0%
!!! CAATTTTATATAATCAATGT+GGG - chr7.4:53983464-53983483 None:intergenic 15.0%
!!! CTATATATTTTCATTTCAAA+TGG - chr7.4:53984180-53984199 None:intergenic 15.0%
!!! GTGTTTTTAATTAATATTTG+AGG + chr7.4:53983000-53983019 MS.gene26044:intron 15.0%
!!! GTTTTTAATTAATATTTGAG+GGG + chr7.4:53983002-53983021 MS.gene26044:intron 15.0%
!! AAAAATAGACAACTAAATAG+TGG - chr7.4:53982812-53982831 None:intergenic 20.0%
!! AATATGCCTATATGTTAAAT+TGG + chr7.4:53984294-53984313 MS.gene26044:intron 20.0%
!! ACAAAAAATCTCTTTCAATA+TGG + chr7.4:53981948-53981967 MS.gene26044:CDS 20.0%
!! ATACTAGAGATAAAGTATAT+AGG - chr7.4:53983837-53983856 None:intergenic 20.0%
!! GCTCATAAATACTTATTAAA+TGG - chr7.4:53984029-53984048 None:intergenic 20.0%
!! TCAAATATTTCATCATACAT+TGG + chr7.4:53984083-53984102 MS.gene26044:intron 20.0%
!! TCAATGTATTATTTAAGTCA+TGG + chr7.4:53983485-53983504 MS.gene26044:intron 20.0%
!! TTTAATGAATCAAAAAGCAA+GGG - chr7.4:53983273-53983292 None:intergenic 20.0%
!! TTTACATTGTTTGACAATTA+AGG - chr7.4:53983986-53984005 None:intergenic 20.0%
!!! ACAAATTACTTATTGATGAT+AGG - chr7.4:53982869-53982888 None:intergenic 20.0%
!!! ACTTTTTGTAGAGAATAAAA+CGG + chr7.4:53982939-53982958 MS.gene26044:intron 20.0%
!!! ATGTGTTGATGATTTTATAA+AGG + chr7.4:53982709-53982728 MS.gene26044:intron 20.0%
!!! ATTATTTACCCTTTTTTCTT+AGG + chr7.4:53983025-53983044 MS.gene26044:intron 20.0%
!!! TTATTTACCCTTTTTTCTTA+GGG + chr7.4:53983026-53983045 MS.gene26044:intron 20.0%
!!! TTTTAATGAATCAAAAAGCA+AGG - chr7.4:53983274-53983293 None:intergenic 20.0%
! AAAAACATCCCTAAGAAAAA+AGG - chr7.4:53983037-53983056 None:intergenic 25.0%
! AAAACATCCCTAAGAAAAAA+GGG - chr7.4:53983036-53983055 None:intergenic 25.0%
! AAGTTTATGAAAGGAAGAAT+TGG + chr7.4:53982429-53982448 MS.gene26044:CDS 25.0%
! AATTATGAGTTTGGATCATA+TGG + chr7.4:53984979-53984998 MS.gene26044:CDS 25.0%
! AATTTGCAAGTATTTGATAG+AGG + chr7.4:53983570-53983589 MS.gene26044:intron 25.0%
! ATAAAAAAGCAAGAGATCTA+AGG - chr7.4:53983093-53983112 None:intergenic 25.0%
! ATCATACAAAACAATATGTG+TGG - chr7.4:53984537-53984556 None:intergenic 25.0%
! CAAACACCAATTTAACATAT+AGG - chr7.4:53984303-53984322 None:intergenic 25.0%
! CTAACAAAAACATATGTGAA+AGG - chr7.4:53983438-53983457 None:intergenic 25.0%
! CTTACAAATGAGACATAAAA+GGG - chr7.4:53983658-53983677 None:intergenic 25.0%
! GAAAGAGTTAAGTTATAAGA+AGG - chr7.4:53983615-53983634 None:intergenic 25.0%
! GAATAATGAAATTCAACACA+AGG + chr7.4:53982160-53982179 MS.gene26044:CDS 25.0%
! GACAATGAATCATAAACAAA+AGG - chr7.4:53984332-53984351 None:intergenic 25.0%
! TCCTATCAAAATAATTCATG+TGG + chr7.4:53983914-53983933 MS.gene26044:intron 25.0%
! TCTTACAAATGAGACATAAA+AGG - chr7.4:53983659-53983678 None:intergenic 25.0%
!!! ATATGTGTGGATTAGATATA+TGG - chr7.4:53984524-53984543 None:intergenic 25.0%
!!! TCCACATGAATTATTTTGAT+AGG - chr7.4:53983918-53983937 None:intergenic 25.0%
!!! TCTACTTCTGAAATACATAA+TGG + chr7.4:53984750-53984769 MS.gene26044:CDS 25.0%
AAATTCCTTTGCTAGTGTTA+AGG - chr7.4:53981917-53981936 None:intergenic 30.0%
AAATTTCAAGAAGATTGCCA+GGG + chr7.4:53984635-53984654 MS.gene26044:CDS 30.0%
AAGGATCCTAATCAAATCAA+GGG + chr7.4:53982179-53982198 MS.gene26044:CDS 30.0%
AATAAGATGGAAGACATACA+TGG + chr7.4:53981888-53981907 MS.gene26044:CDS 30.0%
ACCACAATGAATTATGAGTT+TGG + chr7.4:53984970-53984989 MS.gene26044:CDS 30.0%
AGACATAAAAGGGAGTTATA+AGG - chr7.4:53983648-53983667 None:intergenic 30.0%
AGATCAATTTCTTGCTTAAG+AGG - chr7.4:53985027-53985046 None:intergenic 30.0%
ATAAAAGGGAGTTATAAGGT+TGG - chr7.4:53983644-53983663 None:intergenic 30.0%
ATAGCATGTATTTGTTCCAA+CGG - chr7.4:53984422-53984441 None:intergenic 30.0%
ATCATCAATTTAGCAATGAC+TGG - chr7.4:53984469-53984488 None:intergenic 30.0%
ATGGAGTTTCTTTCACTTAA+TGG + chr7.4:53983504-53983523 MS.gene26044:intron 30.0%
CGTATTGCTAAGTTTATGAA+AGG + chr7.4:53982420-53982439 MS.gene26044:CDS 30.0%
GTAAACTTTACTAAATCTGC+AGG + chr7.4:53984132-53984151 MS.gene26044:intron 30.0%
GTATGTCTTCCATCTTATTA+TGG - chr7.4:53981887-53981906 None:intergenic 30.0%
TAAGCAAGAAATTGATCTCA+TGG + chr7.4:53985029-53985048 MS.gene26044:CDS 30.0%
TAGTATGTAACTCTTAGTCA+TGG + chr7.4:53983851-53983870 MS.gene26044:intron 30.0%
TATGTTCCAATGATGTTCAA+TGG + chr7.4:53984919-53984938 MS.gene26044:CDS 30.0%
TCCAAACTCATAATTCATTG+TGG - chr7.4:53984974-53984993 None:intergenic 30.0%
TCTTCCATCTTATTATGGTT+TGG - chr7.4:53981882-53981901 None:intergenic 30.0%
TGGAACATACCTACAAATTT+CGG - chr7.4:53984908-53984927 None:intergenic 30.0%
! AAAAAAGAGTGTACAAGAAG+GGG - chr7.4:53983156-53983175 None:intergenic 30.0%
! AGAAAAAAGAGTGTACAAGA+AGG - chr7.4:53983158-53983177 None:intergenic 30.0%
! GAAAAAAGAGTGTACAAGAA+GGG - chr7.4:53983157-53983176 None:intergenic 30.0%
! GTATCGATCATAAACTTACA+TGG - chr7.4:53984051-53984070 None:intergenic 30.0%
! TAACACTAGCAAAGGAATTT+TGG + chr7.4:53981917-53981936 MS.gene26044:CDS 30.0%
!! AACCAAATTTTGAAAGCTCA+GGG + chr7.4:53984845-53984864 MS.gene26044:CDS 30.0%
!! AAGAGCGTTATTCATACAAT+TGG + chr7.4:53984262-53984281 MS.gene26044:intron 30.0%
!! CTGATTTTGGTACAAATATG+TGG - chr7.4:53981682-53981701 None:intergenic 30.0%
!! TTGTTTTGTATGATTGCAGA+AGG + chr7.4:53984543-53984562 MS.gene26044:intron 30.0%
!! TTTAACACGAGGTTTTTCAA+GGG + chr7.4:53984230-53984249 MS.gene26044:intron 30.0%
!!! ATTTTTCGAGCATGTGATAT+AGG + chr7.4:53983188-53983207 MS.gene26044:intron 30.0%
!!! TAGGGATGTTTTTTTAGAGA+TGG + chr7.4:53983044-53983063 MS.gene26044:intron 30.0%
!!! TGATTTTAGAACTGAAGGTT+TGG + chr7.4:53984870-53984889 MS.gene26044:CDS 30.0%
AAATCAGTGCACTCAACTTA+AGG + chr7.4:53981695-53981714 MS.gene26044:CDS 35.0%
AAATCCCGAGAAAATGATCA+AGG + chr7.4:53982095-53982114 MS.gene26044:CDS 35.0%
AAATTCTCTCTGATACCCAT+TGG - chr7.4:53981829-53981848 None:intergenic 35.0%
AAGAATGAGACCTTAATGTC+TGG - chr7.4:53982492-53982511 None:intergenic 35.0%
ACAAAACAGTTGGAAACAAG+TGG + chr7.4:53984608-53984627 MS.gene26044:CDS 35.0%
AGATTTGAACCTAGTTGAGA+AGG - chr7.4:53981639-53981658 None:intergenic 35.0%
AGCAATGTAACTTTAACACG+AGG + chr7.4:53984219-53984238 MS.gene26044:intron 35.0%
ATAACTGTATCAAGAACCAC+TGG + chr7.4:53984665-53984684 MS.gene26044:CDS 35.0%
ATCACTTTGGGCTAAGAAAA+TGG + chr7.4:53982394-53982413 MS.gene26044:CDS 35.0%
ATGAATCAAAAAGCAAGGGA+AGG - chr7.4:53983269-53983288 None:intergenic 35.0%
ATTGAAGCTCACAAAACAGT+TGG + chr7.4:53984598-53984617 MS.gene26044:CDS 35.0%
CAAGGATCCTAATCAAATCA+AGG + chr7.4:53982178-53982197 MS.gene26044:CDS 35.0%
CAATGCTAAGGAAGTTGAAA+AGG + chr7.4:53984780-53984799 MS.gene26044:CDS 35.0%
CTAATCAAATCAAGGGACAA+TGG + chr7.4:53982186-53982205 MS.gene26044:CDS 35.0%
GAAATTTCAAGAAGATTGCC+AGG + chr7.4:53984634-53984653 MS.gene26044:CDS 35.0%
GTGGTTCTTGATACAGTTAT+CGG - chr7.4:53984665-53984684 None:intergenic 35.0%
TACAAATATGTGGTGTGTGA+TGG - chr7.4:53981672-53981691 None:intergenic 35.0%
TCAATTAATCCTGAGCTTCA+AGG + chr7.4:53982041-53982060 MS.gene26044:CDS 35.0%
TCATCACCATTGAACATCAT+TGG - chr7.4:53984928-53984947 None:intergenic 35.0%
TGAGTTTGGATCATATGGAA+TGG + chr7.4:53984984-53985003 MS.gene26044:CDS 35.0%
TGCACCAAACCATAATAAGA+TGG + chr7.4:53981875-53981894 MS.gene26044:CDS 35.0%
TTGCAGAAAAACTAGAGTGA+TGG - chr7.4:53981743-53981762 None:intergenic 35.0%
! AATGGACTTCAAATGAGGAT+CGG + chr7.4:53982204-53982223 MS.gene26044:CDS 35.0%
! ATGATGTTCAATGGTGATGA+TGG + chr7.4:53984928-53984947 MS.gene26044:CDS 35.0%
! CATTGTCCCTTGATTTGATT+AGG - chr7.4:53982188-53982207 None:intergenic 35.0%
! CGAATCCTTGATCATTTTCT+CGG - chr7.4:53982103-53982122 None:intergenic 35.0%
! CTATCATGCAATGATGGAAT+TGG + chr7.4:53982068-53982087 MS.gene26044:CDS 35.0%
! CTTTAACACGAGGTTTTTCA+AGG + chr7.4:53984229-53984248 MS.gene26044:intron 35.0%
! CTTTTCAACTTCCTTAGCAT+TGG - chr7.4:53984782-53984801 None:intergenic 35.0%
! GAATCCTTGATCATTTTCTC+GGG - chr7.4:53982102-53982121 None:intergenic 35.0%
!! CAACCAAATTTTGAAAGCTC+AGG + chr7.4:53984844-53984863 MS.gene26044:CDS 35.0%
!! CTTATTATGGTTTGGTGCAA+AGG - chr7.4:53981874-53981893 None:intergenic 35.0%
!!! CTGTTTTTGTCCTTATTCGA+GGG + chr7.4:53983118-53983137 MS.gene26044:intron 35.0%
!!! TAAGTTGAGTGCACTGATTT+TGG - chr7.4:53981695-53981714 None:intergenic 35.0%
!!! TCTGTTTTTGTCCTTATTCG+AGG + chr7.4:53983117-53983136 MS.gene26044:intron 35.0%
!!! TGGAATGGAGTTTTTTTCTG+AGG + chr7.4:53984999-53985018 MS.gene26044:CDS 35.0%
AATGGAAGTCACCAATGCTA+AGG + chr7.4:53984768-53984787 MS.gene26044:CDS 40.0%
ATGCTCGTAGAATACGTCAT+CGG - chr7.4:53984808-53984827 None:intergenic 40.0%
CAAACCAAAACCCTCGAATA+AGG - chr7.4:53983131-53983150 None:intergenic 40.0%
CTACAGAGACCGAAATTTGT+AGG + chr7.4:53984896-53984915 MS.gene26044:CDS 40.0%
CTCCCTGAGCTTTCAAAATT+TGG - chr7.4:53984850-53984869 None:intergenic 40.0%
GGACATCTATCATGCAATGA+TGG + chr7.4:53982062-53982081 MS.gene26044:CDS 40.0%
TAAATGCCAAGAGGAAGAAC+CGG + chr7.4:53984707-53984726 MS.gene26044:CDS 40.0%
TAAGGAACATCCCTTGAATG+AGG + chr7.4:53981713-53981732 MS.gene26044:CDS 40.0%
TATGATTGCAGAAGGATGCA+TGG + chr7.4:53984551-53984570 MS.gene26044:intron 40.0%
TCGAGCATGTGATATAGGAT+GGG + chr7.4:53983193-53983212 MS.gene26044:intron 40.0%
TGAAATTGACAACCGTCATG+TGG + chr7.4:53983784-53983803 MS.gene26044:intron 40.0%
TGTAAAAGCAAGCCACATGA+CGG - chr7.4:53983799-53983818 None:intergenic 40.0%
TGTGCATCATAAGCTAGTGA+TGG - chr7.4:53982011-53982030 None:intergenic 40.0%
TTCGAGCATGTGATATAGGA+TGG + chr7.4:53983192-53983211 MS.gene26044:intron 40.0%
TTGTAGGGTTCTTGTCCAAT+TGG + chr7.4:53982368-53982387 MS.gene26044:intron 40.0%
! TCCAATTGGTGGATCACTTT+GGG + chr7.4:53982382-53982401 MS.gene26044:CDS 40.0%
! TTGTCCTTATTCGAGGGTTT+TGG + chr7.4:53983124-53983143 MS.gene26044:intron 40.0%
!! ATCATAGGGAATGGGTTGAT+GGG - chr7.4:53981777-53981796 None:intergenic 40.0%
!! GTTCAATGGTGATGATGGAA+TGG + chr7.4:53984933-53984952 MS.gene26044:CDS 40.0%
!! TGATGGTTAGCCTCATTCAA+GGG - chr7.4:53981726-53981745 None:intergenic 40.0%
!!! CTTATTCGAGGGTTTTGGTT+TGG + chr7.4:53983129-53983148 MS.gene26044:intron 40.0%
!!! GGGAGTGATTTTAGAACTGA+AGG + chr7.4:53984865-53984884 MS.gene26044:CDS 40.0%
AAATGCCAAGAGGAAGAACC+GGG + chr7.4:53984708-53984727 MS.gene26044:CDS 45.0%
AACCGGGGTAAGAGTTCAAA+GGG + chr7.4:53984724-53984743 MS.gene26044:CDS 45.0%
ACAAGGCTACTCACACCAAT+GGG + chr7.4:53981811-53981830 MS.gene26044:CDS 45.0%
CCAAGATATTGTTCTCCGCA+CGG + chr7.4:53984391-53984410 MS.gene26044:intron 45.0%
CCATCTTCGACCAGACATTA+AGG + chr7.4:53982479-53982498 MS.gene26044:CDS 45.0%
CCTTAATGTCTGGTCGAAGA+TGG - chr7.4:53982482-53982501 None:intergenic 45.0%
CGAGCATGTGATATAGGATG+GGG + chr7.4:53983194-53983213 MS.gene26044:intron 45.0%
GAAAACAGTGCAGAGAGAGA+TGG + chr7.4:53982451-53982470 MS.gene26044:CDS 45.0%
GACGTATTCTACGAGCATGA+TGG + chr7.4:53984810-53984829 MS.gene26044:CDS 45.0%
GAGCATGTGATATAGGATGG+GGG + chr7.4:53983195-53983214 MS.gene26044:intron 45.0%
GATAGATGTCCTTGAAGCTC+AGG - chr7.4:53982053-53982072 None:intergenic 45.0%
GCATGTATTTGTTCCAACGG+TGG - chr7.4:53984419-53984438 None:intergenic 45.0%
GGTTCTTCCTCTTGGCATTT+AGG - chr7.4:53984708-53984727 None:intergenic 45.0%
TACAAGGCTACTCACACCAA+TGG + chr7.4:53981810-53981829 MS.gene26044:CDS 45.0%
TAGGGTTCTTGTCCAATTGG+TGG + chr7.4:53982371-53982390 MS.gene26044:intron 45.0%
TCTTCCTCTTGGCATTTAGG+CGG - chr7.4:53984705-53984724 None:intergenic 45.0%
TGGTGAAACTTCACAACCTC+CGG + chr7.4:53981968-53981987 MS.gene26044:CDS 45.0%
TTCCCTTTGAACTCTTACCC+CGG - chr7.4:53984729-53984748 None:intergenic 45.0%
! AAAAGCAAGGGAAGGCATGA+AGG - chr7.4:53983261-53983280 None:intergenic 45.0%
! AAAGCAAGGGAAGGCATGAA+GGG - chr7.4:53983260-53983279 None:intergenic 45.0%
! AGCTAGTGATGGTGATAGAG+AGG - chr7.4:53982000-53982019 None:intergenic 45.0%
! AGGGAGTTATAAGGTTGGCT+TGG - chr7.4:53983639-53983658 None:intergenic 45.0%
! GCTAGTGATGGTGATAGAGA+GGG - chr7.4:53981999-53982018 None:intergenic 45.0%
! GGGACAATGGACTTCAAATG+AGG + chr7.4:53982199-53982218 MS.gene26044:CDS 45.0%
! GTCCAATTGGTGGATCACTT+TGG + chr7.4:53982381-53982400 MS.gene26044:CDS 45.0%
! TATGGAGTGTCAACCTGGTT+GGG + chr7.4:53983222-53983241 MS.gene26044:intron 45.0%
! TATGTGGTGTGTGATGGTGA+AGG - chr7.4:53981666-53981685 None:intergenic 45.0%
!! GATCATAGGGAATGGGTTGA+TGG - chr7.4:53981778-53981797 None:intergenic 45.0%
!! GTGATGGTTAGCCTCATTCA+AGG - chr7.4:53981727-53981746 None:intergenic 45.0%
!! TCATAGGGAATGGGTTGATG+GGG - chr7.4:53981776-53981795 None:intergenic 45.0%
!!! AATCCTCTTCAGCCGCTTTT+GGG - chr7.4:53982135-53982154 None:intergenic 45.0%
!! AAAAAATAATAATATAATCA+AGG - chr7.4:53982299-53982318 None:intergenic 5.0%
!! AATAAAACAAAAAAAAATTA+TGG + chr7.4:53982647-53982666 MS.gene26044:intron 5.0%
AATGCCAAGAGGAAGAACCG+GGG + chr7.4:53984709-53984728 MS.gene26044:CDS 50.0%
CCGTGCGGAGAACAATATCT+TGG - chr7.4:53984394-53984413 None:intergenic 50.0%
GAACCGGGGTAAGAGTTCAA+AGG + chr7.4:53984723-53984742 MS.gene26044:CDS 50.0%
GATGGAATGGCAAGTGGATC+TGG + chr7.4:53984946-53984965 MS.gene26044:CDS 50.0%
GCCCAAAGTGATCCACCAAT+TGG - chr7.4:53982386-53982405 None:intergenic 50.0%
GGTCGCCTTAACACTAGCAA+AGG + chr7.4:53981909-53981928 MS.gene26044:CDS 50.0%
GGTGATAGAGAGGGACTTAC+CGG - chr7.4:53981990-53982009 None:intergenic 50.0%
TCCCTATGATCCCAGCCAAT+CGG + chr7.4:53981787-53981806 MS.gene26044:CDS 50.0%
TGGCTGGGATCATAGGGAAT+GGG - chr7.4:53981785-53981804 None:intergenic 50.0%
TTGGCTGGGATCATAGGGAA+TGG - chr7.4:53981786-53981805 None:intergenic 50.0%
! ACCAGGTTGACACTCCATAG+CGG - chr7.4:53983221-53983240 None:intergenic 50.0%
! ACCGATTGGCTGGGATCATA+GGG - chr7.4:53981791-53981810 None:intergenic 50.0%
! CTATGGAGTGTCAACCTGGT+TGG + chr7.4:53983221-53983240 MS.gene26044:intron 50.0%
! GAAGGATGCATGGACTGAAG+AGG + chr7.4:53984561-53984580 MS.gene26044:intron 50.0%
! TACCGATTGGCTGGGATCAT+AGG - chr7.4:53981792-53981811 None:intergenic 50.0%
!! CATAGGGAATGGGTTGATGG+GGG - chr7.4:53981775-53981794 None:intergenic 50.0%
!! GAATCCTCTTCAGCCGCTTT+TGG - chr7.4:53982136-53982155 None:intergenic 50.0%
!! GGTGATGATGGAATGGCAAG+TGG + chr7.4:53984940-53984959 MS.gene26044:CDS 50.0%
!! GTGAGTAGCCTTGTACCGAT+TGG - chr7.4:53981805-53981824 None:intergenic 50.0%
!! TAGCCTTGTACCGATTGGCT+GGG - chr7.4:53981800-53981819 None:intergenic 50.0%
ATACAGTTATCGGTGCGCCC+TGG - chr7.4:53984655-53984674 None:intergenic 55.0%
ATATAGGATGGGGGCCGCTA+TGG + chr7.4:53983204-53983223 MS.gene26044:intron 55.0%
CTTACCCCGGTTCTTCCTCT+TGG - chr7.4:53984716-53984735 None:intergenic 55.0%
GATAGAGAGGGACTTACCGG+AGG - chr7.4:53981987-53982006 None:intergenic 55.0%
GATCCCAGCCAATCGGTACA+AGG + chr7.4:53981794-53981813 MS.gene26044:CDS 55.0%
TCGTGCTCAGTGCCCAAAAG+CGG + chr7.4:53982120-53982139 MS.gene26044:CDS 55.0%
! GAAGGCATGAAGGGACGACT+AGG - chr7.4:53983251-53983270 None:intergenic 55.0%
! GGATGCATGGACTGAAGAGG+AGG + chr7.4:53984564-53984583 MS.gene26044:CDS 55.0%
!! GTAGCCTTGTACCGATTGGC+TGG - chr7.4:53981801-53981820 None:intergenic 55.0%
AGCGCCGCCTAAATGCCAAG+AGG + chr7.4:53984698-53984717 MS.gene26044:CDS 60.0%
GACGACTAGGCATCCCAACC+AGG - chr7.4:53983238-53983257 None:intergenic 60.0%
GGCATTTAGGCGGCGCTTAG+TGG - chr7.4:53984695-53984714 None:intergenic 60.0%
GGCGCTTAGTGGCATTCCAG+TGG - chr7.4:53984684-53984703 None:intergenic 60.0%
GTGCCCAAAAGCGGCTGAAG+AGG + chr7.4:53982129-53982148 MS.gene26044:CDS 60.0%
! GCCGCTATGGAGTGTCAACC+TGG + chr7.4:53983217-53983236 MS.gene26044:intron 60.0%
!! GGGAATGGGTTGATGGGGGA+AGG - chr7.4:53981771-53981790 None:intergenic 60.0%
GTTCCAACGGTGGCACCGTG+CGG - chr7.4:53984409-53984428 None:intergenic 65.0%
!! TCTCCGCACGGTGCCACCGT+TGG + chr7.4:53984403-53984422 MS.gene26044:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 53981630 53985074 53981630 ID=MS.gene26044
chr7.4 mRNA 53981630 53985074 53981630 ID=MS.gene26044.t1;Parent=MS.gene26044
chr7.4 exon 53981630 53982225 53981630 ID=MS.gene26044.t1.exon1;Parent=MS.gene26044.t1
chr7.4 CDS 53981630 53982225 53981630 ID=cds.MS.gene26044.t1;Parent=MS.gene26044.t1
chr7.4 exon 53982374 53982500 53982374 ID=MS.gene26044.t1.exon2;Parent=MS.gene26044.t1
chr7.4 CDS 53982374 53982500 53982374 ID=cds.MS.gene26044.t1;Parent=MS.gene26044.t1
chr7.4 exon 53984562 53985074 53984562 ID=MS.gene26044.t1.exon3;Parent=MS.gene26044.t1
chr7.4 CDS 53984562 53985074 53984562 ID=cds.MS.gene26044.t1;Parent=MS.gene26044.t1
Gene Sequence

>MS.gene26044

ATGGTTCCTTCTCAACTAGGTTCAAATCTTTCACCTTCACCATCACACACCACATATTTGTACCAAAATCAGTGCACTCAACTTAAGGAACATCCCTTGAATGAGGCTAACCATCACTCTAGTTTTTCTGCAATGATTCCTTCCCCCATCAACCCATTCCCTATGATCCCAGCCAATCGGTACAAGGCTACTCACACCAATGGGTATCAGAGAGAATTTATCAGTGCTCGAAATTCAATGACCTTTGCACCAAACCATAATAAGATGGAAGACATACATGGTCGCCTTAACACTAGCAAAGGAATTTTGGATTTGTCTACAAAAAATCTCTTTCAATATGGTGAAACTTCACAACCTCCGGTAAGTCCCTCTCTATCACCATCACTAGCTTATGATGCACATAAATATGTGTCAATTAATCCTGAGCTTCAAGGACATCTATCATGCAATGATGGAATTGGAAACAAATCCCGAGAAAATGATCAAGGATTCGTGCTCAGTGCCCAAAAGCGGCTGAAGAGGATTCAAAAGAATAATGAAATTCAACACAAGGATCCTAATCAAATCAAGGGACAATGGACTTCAAATGAGGATCGGTATATCAAATCATTTAAAATTTTGTATTGTCTTTGTTTATTGTTTTAATTCTCAATTTGATTCATCTTACCTTGATTATATTATTATTTTTTGTTATTTGTTCTTGACATATGATAAACAATGAATAATTGTTTTATATTTTTGTAGGGTTCTTGTCCAATTGGTGGATCACTTTGGGCTAAGAAAATGGTCGCGTATTGCTAAGTTTATGAAAGGAAGAATTGGAAAACAGTGCAGAGAGAGATGGAACAACCATCTTCGACCAGACATTAAGGTCTCATTCTTTTTAATCTTTTATAGATTTTATCTCTTATACATACACATATAAATAAAATCATATCAGCTGTAAGCAATATTGATTCTTGCTTACTTTTTCCCTTAACATATTTGATTTTTACATGCATACATATAGCTGCATCAAATAAAACAAAAAAAAATTATGGATGCATGTAAATAAATGAATCAATGCAAGTAAAATCATTATGTGTTGATGATTTTATAAAGGAAAGCAGAATTTGTAACTATCATAATAGTTTAATAAACATTTCATTGGATTTATAATGATATTTTTGTAATACATCACCACTATTTAGTTGTCTATTTTTATAAATAAACATTGTACTAAATCTTTTTATTGTTCCTATCATCAATAAGTAATTTGTTTAAAATATTTTTTTTAAACATTTTTTAAAATACCGATGATAAATATGTTACTTTTTGTAGAGAATAAAACGGACGATGTCTATAAGAGTGCACCTAAGTTTTATTTATAAGTGTTTTTAATTAATATTTGAGGGGATTATTTACCCTTTTTTCTTAGGGATGTTTTTTTAGAGATGGTCACAGACTTTCACTCTTTATTTCCTTAGATCTCTTGCTTTTTTATTGTTTCTGTTTTTGTCCTTATTCGAGGGTTTTGGTTTGGACCCCTTCTTGTACACTCTTTTTTCTTTTTTAATCAATTTTTCGAGCATGTGATATAGGATGGGGGCCGCTATGGAGTGTCAACCTGGTTGGGATGCCTAGTCGTCCCTTCATGCCTTCCCTTGCTTTTTGATTCATTAAAAAAAATTAATAAGTTTTTTGTTTAATATCTAATATTGAGGTCATTTTTGTTTATAGAAATTTATCTTTATCTATTTTTAATTTTGGTAATTTCGAATAGATGAATTTTACACGAATGATATTTGACTTATTTTCACGAAACTCCTTTCACATATGTTTTTGTTAGAGTCCCACATTGATTATATAAAATTGTTCAATGTATTATTTAAGTCATGGAGTTTCTTTCACTTAATGGACTAGACTATCTGTTTTTTTTTTTTTTTAAACAATGTTATGCTAATTTGCAAGTATTTGATAGAGGTGAAAATTTGAACTCAAATCCTTCTTATAACTTAACTCTTTCGCCAAGCCAACCTTATAACTCCCTTTTATGTCTCATTTGTAAGACTAATATTTCTTATTTTATACAAAAAGACTAATAATGTTTAAGATATCTCTCATTTTTTTTCAATTTTTTTTTTGTCTCATTTGTAAGACTAATATATAGTAGCATGAAATTGACAACCGTCATGTGGCTTGCTTTTACACTATTCGTTCTGTTACCTATATACTTTATCTCTAGTATGTAACTCTTAGTCATGGTTTATGTTAAAAACTTATTTTGTTTTGTTTCGTCGTTGCTTCCTATCAAAATAATTCATGTGGATAAACTATGCTTTGTTTTTAATTACATTGCGTTGTAAAATGTTATCCTTAATTGTCAAACAATGTAAATGATCGATGTCAAAATTATTCCATTTAATAAGTATTTATGAGCCATGTAAGTTTATGATCGATACATTACTCGTATTTCAAATATTTCATCATACATTGGACTGAAATAAATTGATGATTTTTTTTGTAAACTTTACTAAATCTGCAGGTTTGATATAGTCAATCAATTTTCCATTTGAAATGAAAATATATAGAATTTACATAGATTTATTAAGCAATGTAACTTTAACACGAGGTTTTTCAAGGGAATTTTAACAAGAGCGTTATTCATACAATTGGTAGATCTTCAATATGCCTATATGTTAAATTGGTGTTTGATTTCGCCTTTTGTTTATGATTCATTGTCACAATGTCATATATACTACAATTTCATGAAGCAAGAAATCCAAGATATTGTTCTCCGCACGGTGCCACCGTTGGAACAAATACATGCTATATTTTGTTAGATAGCTAATTAGAACCAGTCATTGCTAAATTGATGATATGTGAATCTTTCTTACATTAAATATAATTAACCATATATCTAATCCACACATATTGTTTTGTATGATTGCAGAAGGATGCATGGACTGAAGAGGAGGACAAAATACTAATTGAAGCTCACAAAACAGTTGGAAACAAGTGGACTGAAATTTCAAGAAGATTGCCAGGGCGCACCGATAACTGTATCAAGAACCACTGGAATGCCACTAAGCGCCGCCTAAATGCCAAGAGGAAGAACCGGGGTAAGAGTTCAAAGGGAATTCTACTTCTGAAATACATAATGGAAGTCACCAATGCTAAGGAAGTTGAAAAGGAGCCGATGACGTATTCTACGAGCATGATGGATATTAGAAATCAACCAAATTTTGAAAGCTCAGGGAGTGATTTTAGAACTGAAGGTTTGGCTACTACAGAGACCGAAATTTGTAGGTATGTTCCAATGATGTTCAATGGTGATGATGGAATGGCAAGTGGATCTGGTACCACAATGAATTATGAGTTTGGATCATATGGAATGGAGTTTTTTTCTGAGGTTCCTCTTAAGCAAGAAATTGATCTCATGGAGATGATATATAAAAACCCTTAA
Protein sequence

>MS.gene26044.t1

MVPSQLGSNLSPSPSHTTYLYQNQCTQLKEHPLNEANHHSSFSAMIPSPINPFPMIPANRYKATHTNGYQREFISARNSMTFAPNHNKMEDIHGRLNTSKGILDLSTKNLFQYGETSQPPVSPSLSPSLAYDAHKYVSINPELQGHLSCNDGIGNKSRENDQGFVLSAQKRLKRIQKNNEIQHKDPNQIKGQWTSNEDRVLVQLVDHFGLRKWSRIAKFMKGRIGKQCRERWNNHLRPDIKKDAWTEEEDKILIEAHKTVGNKWTEISRRLPGRTDNCIKNHWNATKRRLNAKRKNRGKSSKGILLLKYIMEVTNAKEVEKEPMTYSTSMMDIRNQPNFESSGSDFRTEGLATTETEICRYVPMMFNGDDGMASGSGTTMNYEFGSYGMEFFSEVPLKQEIDLMEMIYKNP