Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26055.t1 | XP_013456909.1 | 86.3 | 73 | 10 | 0 | 55 | 127 | 231 | 303 | 1.20E-28 | 136.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26055.t1 | Q9S7L2 | 65.9 | 82 | 22 | 1 | 55 | 136 | 227 | 302 | 4.1e-25 | 115.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26055.t1 | A0A072UYL7 | 86.3 | 73 | 10 | 0 | 55 | 127 | 231 | 303 | 8.8e-29 | 136.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene26055.t1 | TF | MYB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26055.t1 | MTR_7g451170 | 78.824 | 85 | 12 | 1 | 55 | 139 | 201 | 279 | 2.11e-40 | 140 |
MS.gene26055.t1 | MTR_4g088015 | 86.301 | 73 | 10 | 0 | 55 | 127 | 231 | 303 | 8.28e-40 | 139 |
MS.gene26055.t1 | MTR_7g037260 | 72.941 | 85 | 17 | 1 | 55 | 139 | 155 | 233 | 1.09e-36 | 129 |
MS.gene26055.t1 | MTR_1g057980 | 67.442 | 86 | 22 | 1 | 54 | 139 | 89 | 168 | 4.40e-35 | 124 |
MS.gene26055.t1 | MTR_7g037130 | 77.941 | 68 | 15 | 0 | 55 | 122 | 155 | 222 | 9.06e-33 | 119 |
MS.gene26055.t1 | MTR_7g035350 | 56.881 | 109 | 31 | 2 | 56 | 154 | 236 | 338 | 5.64e-31 | 116 |
MS.gene26055.t1 | MTR_3g077650 | 63.529 | 85 | 25 | 1 | 55 | 139 | 191 | 269 | 2.71e-29 | 111 |
MS.gene26055.t1 | MTR_3g463400 | 61.728 | 81 | 25 | 1 | 56 | 136 | 144 | 218 | 4.39e-29 | 110 |
MS.gene26055.t1 | MTR_5g049190 | 58.824 | 85 | 29 | 1 | 55 | 139 | 29 | 107 | 1.26e-28 | 105 |
MS.gene26055.t1 | MTR_4g105660 | 62.195 | 82 | 25 | 1 | 55 | 136 | 190 | 265 | 1.35e-28 | 109 |
MS.gene26055.t1 | MTR_5g070020 | 59.259 | 81 | 27 | 1 | 56 | 136 | 133 | 207 | 9.25e-28 | 106 |
MS.gene26055.t1 | MTR_7g450950 | 57.647 | 85 | 30 | 1 | 55 | 139 | 167 | 245 | 3.40e-26 | 101 |
MS.gene26055.t1 | MTR_7g061330 | 62.687 | 67 | 25 | 0 | 56 | 122 | 124 | 190 | 1.57e-23 | 96.3 |
MS.gene26055.t1 | MTR_7g461410 | 62.687 | 67 | 25 | 0 | 56 | 122 | 124 | 190 | 1.57e-23 | 96.3 |
MS.gene26055.t1 | MTR_7g061330 | 62.687 | 67 | 25 | 0 | 56 | 122 | 88 | 154 | 2.06e-23 | 95.9 |
MS.gene26055.t1 | MTR_1g026870 | 55.882 | 68 | 30 | 0 | 55 | 122 | 95 | 162 | 7.42e-23 | 94.4 |
MS.gene26055.t1 | MTR_3g110028 | 54.412 | 68 | 31 | 0 | 55 | 122 | 95 | 162 | 4.14e-22 | 92.0 |
MS.gene26055.t1 | MTR_5g010650 | 55.882 | 68 | 30 | 0 | 55 | 122 | 120 | 187 | 1.24e-20 | 87.8 |
MS.gene26055.t1 | MTR_4g019370 | 50.000 | 68 | 34 | 0 | 55 | 122 | 48 | 115 | 8.66e-19 | 81.6 |
MS.gene26055.t1 | MTR_1g008970 | 63.462 | 52 | 19 | 0 | 71 | 122 | 117 | 168 | 7.83e-18 | 77.8 |
MS.gene26055.t1 | MTR_4g094982 | 49.254 | 67 | 34 | 0 | 56 | 122 | 16 | 82 | 1.09e-17 | 77.8 |
MS.gene26055.t1 | MTR_3g101290 | 44.118 | 68 | 38 | 0 | 55 | 122 | 47 | 114 | 3.93e-16 | 72.8 |
MS.gene26055.t1 | MTR_6g027370 | 49.254 | 67 | 34 | 0 | 56 | 122 | 110 | 176 | 1.51e-15 | 72.8 |
MS.gene26055.t1 | MTR_6g027340 | 46.269 | 67 | 36 | 0 | 56 | 122 | 27 | 93 | 2.14e-15 | 70.5 |
MS.gene26055.t1 | MTR_5g082910 | 46.377 | 69 | 37 | 0 | 55 | 123 | 29 | 97 | 3.59e-15 | 71.2 |
MS.gene26055.t1 | MTR_5g016510 | 45.588 | 68 | 37 | 0 | 55 | 122 | 15 | 82 | 3.71e-15 | 71.6 |
MS.gene26055.t1 | MTR_2g064160 | 41.463 | 82 | 41 | 2 | 56 | 136 | 24 | 99 | 5.42e-15 | 70.9 |
MS.gene26055.t1 | MTR_4g082040 | 46.269 | 67 | 36 | 0 | 56 | 122 | 116 | 182 | 7.65e-15 | 71.2 |
MS.gene26055.t1 | MTR_6g074860 | 38.095 | 105 | 55 | 2 | 56 | 160 | 15 | 109 | 1.02e-14 | 69.3 |
MS.gene26055.t1 | MTR_5g041570 | 46.269 | 67 | 36 | 0 | 56 | 122 | 145 | 211 | 1.62e-14 | 70.1 |
MS.gene26055.t1 | MTR_6g027360 | 44.776 | 67 | 37 | 0 | 56 | 122 | 89 | 155 | 1.76e-14 | 69.7 |
MS.gene26055.t1 | MTR_5g038910 | 52.542 | 59 | 28 | 0 | 64 | 122 | 45 | 103 | 3.03e-14 | 69.3 |
MS.gene26055.t1 | MTR_5g038910 | 52.542 | 59 | 28 | 0 | 64 | 122 | 45 | 103 | 4.43e-14 | 68.9 |
MS.gene26055.t1 | MTR_3g052450 | 40.964 | 83 | 42 | 2 | 55 | 136 | 52 | 128 | 4.45e-14 | 68.9 |
MS.gene26055.t1 | MTR_5g007370 | 42.683 | 82 | 37 | 3 | 59 | 136 | 25 | 100 | 8.93e-14 | 67.4 |
MS.gene26055.t1 | MTR_3g052430 | 39.759 | 83 | 43 | 2 | 55 | 136 | 53 | 129 | 1.53e-13 | 67.4 |
MS.gene26055.t1 | MTR_5g029840 | 37.805 | 82 | 44 | 2 | 56 | 136 | 25 | 100 | 1.86e-13 | 67.0 |
MS.gene26055.t1 | MTR_6g015455 | 42.647 | 68 | 39 | 0 | 55 | 122 | 15 | 82 | 2.22e-13 | 67.0 |
MS.gene26055.t1 | MTR_8g017340 | 47.143 | 70 | 30 | 2 | 68 | 136 | 38 | 101 | 2.64e-13 | 66.6 |
MS.gene26055.t1 | MTR_8g468380 | 42.647 | 68 | 39 | 0 | 55 | 122 | 32 | 99 | 3.13e-13 | 66.6 |
MS.gene26055.t1 | MTR_4g478180 | 39.759 | 83 | 43 | 2 | 55 | 136 | 25 | 101 | 3.85e-13 | 66.2 |
MS.gene26055.t1 | MTR_8g017350 | 50.000 | 58 | 28 | 1 | 68 | 124 | 38 | 95 | 4.23e-13 | 66.2 |
MS.gene26055.t1 | MTR_3g074520 | 40.244 | 82 | 42 | 2 | 56 | 136 | 25 | 100 | 4.89e-13 | 65.9 |
MS.gene26055.t1 | MTR_2g099740 | 40.244 | 82 | 42 | 2 | 56 | 136 | 25 | 100 | 5.06e-13 | 65.9 |
MS.gene26055.t1 | MTR_4g100720 | 41.463 | 82 | 41 | 2 | 56 | 136 | 26 | 101 | 6.57e-13 | 63.5 |
MS.gene26055.t1 | MTR_7g086960 | 49.254 | 67 | 34 | 0 | 56 | 122 | 100 | 166 | 6.84e-13 | 65.5 |
MS.gene26055.t1 | MTR_4g091490 | 41.463 | 82 | 41 | 2 | 56 | 136 | 26 | 101 | 7.66e-13 | 65.1 |
MS.gene26055.t1 | MTR_7g110830 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 7.84e-13 | 65.1 |
MS.gene26055.t1 | MTR_2g011660 | 41.463 | 82 | 41 | 2 | 56 | 136 | 26 | 101 | 8.77e-13 | 65.1 |
MS.gene26055.t1 | MTR_1g085040 | 37.805 | 82 | 44 | 2 | 56 | 136 | 25 | 100 | 1.15e-12 | 64.7 |
MS.gene26055.t1 | MTR_8g017440 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 1.21e-12 | 64.7 |
MS.gene26055.t1 | MTR_3g097450 | 39.130 | 92 | 39 | 2 | 45 | 136 | 26 | 100 | 1.35e-12 | 64.3 |
MS.gene26055.t1 | MTR_2g089620 | 39.759 | 83 | 43 | 2 | 55 | 136 | 24 | 100 | 1.44e-12 | 64.3 |
MS.gene26055.t1 | MTR_2g089450 | 43.662 | 71 | 39 | 1 | 56 | 125 | 25 | 95 | 1.47e-12 | 63.5 |
MS.gene26055.t1 | MTR_8g095390 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 1.47e-12 | 64.3 |
MS.gene26055.t1 | MTR_8g017500 | 41.176 | 68 | 39 | 1 | 56 | 122 | 25 | 92 | 1.65e-12 | 64.3 |
MS.gene26055.t1 | MTR_8g017540 | 39.024 | 82 | 43 | 2 | 56 | 136 | 71 | 146 | 1.68e-12 | 64.3 |
MS.gene26055.t1 | MTR_1g085640 | 37.805 | 82 | 44 | 2 | 56 | 136 | 25 | 100 | 1.73e-12 | 64.3 |
MS.gene26055.t1 | MTR_7g115650 | 39.286 | 84 | 42 | 3 | 55 | 136 | 24 | 100 | 1.75e-12 | 62.8 |
MS.gene26055.t1 | MTR_1g112760 | 37.805 | 82 | 44 | 2 | 56 | 136 | 26 | 101 | 1.85e-12 | 63.2 |
MS.gene26055.t1 | MTR_3g077110 | 37.805 | 82 | 44 | 2 | 56 | 136 | 25 | 100 | 1.94e-12 | 63.9 |
MS.gene26055.t1 | MTR_7g111290 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 1.95e-12 | 64.3 |
MS.gene26055.t1 | MTR_3g089045 | 47.761 | 67 | 35 | 0 | 56 | 122 | 27 | 93 | 2.06e-12 | 63.5 |
MS.gene26055.t1 | MTR_8g042410 | 39.286 | 84 | 42 | 3 | 55 | 136 | 49 | 125 | 2.31e-12 | 63.9 |
MS.gene26055.t1 | MTR_0008s0390 | 39.024 | 82 | 43 | 2 | 56 | 136 | 26 | 101 | 2.82e-12 | 63.2 |
MS.gene26055.t1 | MTR_0251s0050 | 39.024 | 82 | 43 | 2 | 56 | 136 | 26 | 101 | 3.44e-12 | 62.8 |
MS.gene26055.t1 | MTR_4g073420 | 49.153 | 59 | 24 | 1 | 78 | 136 | 48 | 100 | 3.81e-12 | 62.8 |
MS.gene26055.t1 | MTR_4g082290 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 3.84e-12 | 63.2 |
MS.gene26055.t1 | MTR_4g105130 | 38.554 | 83 | 42 | 3 | 56 | 136 | 25 | 100 | 3.88e-12 | 63.2 |
MS.gene26055.t1 | MTR_0008s0470 | 37.805 | 82 | 44 | 2 | 56 | 136 | 26 | 101 | 5.99e-12 | 62.4 |
MS.gene26055.t1 | MTR_4g082230 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 7.39e-12 | 62.4 |
MS.gene26055.t1 | MTR_1g021230 | 42.029 | 69 | 39 | 1 | 55 | 122 | 69 | 137 | 8.57e-12 | 62.4 |
MS.gene26055.t1 | MTR_3g028740 | 44.286 | 70 | 32 | 2 | 68 | 136 | 47 | 110 | 8.80e-12 | 62.0 |
MS.gene26055.t1 | MTR_4g125520 | 39.583 | 96 | 41 | 2 | 41 | 136 | 22 | 100 | 9.29e-12 | 62.0 |
MS.gene26055.t1 | MTR_2g067420 | 40.244 | 82 | 42 | 2 | 56 | 136 | 27 | 102 | 1.13e-11 | 61.6 |
MS.gene26055.t1 | MTR_3g011610 | 35.714 | 84 | 47 | 2 | 54 | 136 | 48 | 125 | 1.18e-11 | 62.0 |
MS.gene26055.t1 | MTR_7g096930 | 36.905 | 84 | 44 | 3 | 55 | 136 | 24 | 100 | 1.34e-11 | 61.2 |
MS.gene26055.t1 | MTR_8g031360 | 41.176 | 85 | 40 | 4 | 55 | 136 | 25 | 102 | 1.63e-11 | 61.2 |
MS.gene26055.t1 | MTR_6g009430 | 37.349 | 83 | 44 | 3 | 55 | 136 | 25 | 100 | 1.84e-11 | 61.2 |
MS.gene26055.t1 | MTR_7g111290 | 45.763 | 59 | 26 | 1 | 78 | 136 | 6 | 58 | 2.13e-11 | 61.2 |
MS.gene26055.t1 | MTR_7g076740 | 47.458 | 59 | 25 | 1 | 78 | 136 | 49 | 101 | 2.42e-11 | 60.8 |
MS.gene26055.t1 | MTR_8g027345 | 40.000 | 85 | 42 | 3 | 54 | 136 | 23 | 100 | 2.48e-11 | 60.8 |
MS.gene26055.t1 | MTR_6g012690 | 41.176 | 68 | 39 | 1 | 56 | 122 | 25 | 92 | 2.50e-11 | 60.8 |
MS.gene26055.t1 | MTR_7g117730 | 38.095 | 84 | 45 | 2 | 54 | 136 | 23 | 100 | 2.61e-11 | 60.5 |
MS.gene26055.t1 | MTR_2g097910 | 41.429 | 70 | 34 | 2 | 68 | 136 | 45 | 108 | 2.98e-11 | 60.5 |
MS.gene26055.t1 | MTR_4g063100 | 39.024 | 82 | 43 | 2 | 56 | 136 | 20 | 95 | 3.17e-11 | 60.1 |
MS.gene26055.t1 | MTR_5g042030 | 40.244 | 82 | 42 | 2 | 56 | 136 | 20 | 95 | 3.27e-11 | 60.5 |
MS.gene26055.t1 | MTR_1g062940 | 37.805 | 82 | 44 | 2 | 56 | 136 | 19 | 94 | 3.45e-11 | 59.7 |
MS.gene26055.t1 | MTR_8g017390 | 41.667 | 72 | 35 | 2 | 68 | 138 | 38 | 103 | 3.62e-11 | 60.5 |
MS.gene26055.t1 | MTR_7g061550 | 36.782 | 87 | 46 | 2 | 54 | 137 | 16 | 96 | 3.99e-11 | 60.5 |
MS.gene26055.t1 | MTR_2g089420 | 36.585 | 82 | 45 | 2 | 56 | 136 | 24 | 99 | 4.00e-11 | 60.5 |
MS.gene26055.t1 | MTR_1g043050 | 37.349 | 83 | 45 | 2 | 55 | 136 | 24 | 100 | 5.43e-11 | 59.3 |
MS.gene26055.t1 | MTR_4g485530 | 36.585 | 82 | 45 | 2 | 56 | 136 | 25 | 100 | 6.00e-11 | 58.5 |
MS.gene26055.t1 | MTR_7g011170 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 7.20e-11 | 59.3 |
MS.gene26055.t1 | MTR_5g010020 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 8.28e-11 | 59.3 |
MS.gene26055.t1 | MTR_1g076150 | 36.145 | 83 | 46 | 2 | 55 | 136 | 24 | 100 | 9.04e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26055.t1 | AT4G18770 | 63.529 | 85 | 25 | 1 | 55 | 139 | 227 | 305 | 3.78e-31 | 116 |
MS.gene26055.t1 | AT3G27785 | 63.529 | 85 | 25 | 1 | 55 | 139 | 199 | 277 | 1.64e-29 | 112 |
MS.gene26055.t1 | AT5G40360 | 62.195 | 82 | 25 | 1 | 55 | 136 | 168 | 243 | 1.54e-28 | 108 |
MS.gene26055.t1 | AT5G11050 | 65.672 | 67 | 23 | 0 | 56 | 122 | 116 | 182 | 9.49e-27 | 104 |
MS.gene26055.t1 | AT5G58850 | 62.687 | 67 | 25 | 0 | 56 | 122 | 116 | 182 | 9.47e-26 | 101 |
MS.gene26055.t1 | AT5G11510 | 55.882 | 68 | 30 | 0 | 55 | 122 | 91 | 158 | 5.23e-24 | 97.8 |
MS.gene26055.t1 | AT5G11510 | 55.882 | 68 | 30 | 0 | 55 | 122 | 91 | 158 | 5.23e-24 | 97.8 |
MS.gene26055.t1 | AT5G11510 | 55.882 | 68 | 30 | 0 | 55 | 122 | 91 | 158 | 5.23e-24 | 97.8 |
MS.gene26055.t1 | AT5G11510 | 55.882 | 68 | 30 | 0 | 55 | 122 | 91 | 158 | 7.03e-24 | 97.4 |
MS.gene26055.t1 | AT5G11510 | 55.882 | 68 | 30 | 0 | 55 | 122 | 91 | 158 | 7.93e-24 | 97.1 |
MS.gene26055.t1 | AT2G25230 | 68.966 | 58 | 18 | 0 | 67 | 124 | 48 | 105 | 2.65e-23 | 92.0 |
MS.gene26055.t1 | AT3G09370 | 53.086 | 81 | 32 | 1 | 56 | 136 | 141 | 215 | 1.66e-22 | 93.2 |
MS.gene26055.t1 | AT3G09370 | 58.209 | 67 | 28 | 0 | 56 | 122 | 154 | 220 | 1.69e-22 | 93.2 |
MS.gene26055.t1 | AT3G09370 | 53.086 | 81 | 32 | 1 | 56 | 136 | 146 | 220 | 1.80e-22 | 93.2 |
MS.gene26055.t1 | AT5G40430 | 62.712 | 59 | 22 | 0 | 66 | 124 | 74 | 132 | 3.50e-22 | 89.7 |
MS.gene26055.t1 | AT5G02320 | 56.716 | 67 | 29 | 0 | 56 | 122 | 138 | 204 | 4.85e-22 | 92.0 |
MS.gene26055.t1 | AT5G02320 | 56.716 | 67 | 29 | 0 | 56 | 122 | 138 | 204 | 4.85e-22 | 92.0 |
MS.gene26055.t1 | AT5G02320 | 56.716 | 67 | 29 | 0 | 56 | 122 | 78 | 144 | 5.45e-22 | 91.7 |
MS.gene26055.t1 | AT4G32730 | 52.941 | 68 | 32 | 0 | 55 | 122 | 97 | 164 | 1.31e-21 | 90.9 |
MS.gene26055.t1 | AT4G32730 | 52.941 | 68 | 32 | 0 | 55 | 122 | 97 | 164 | 1.31e-21 | 90.9 |
MS.gene26055.t1 | AT4G32730 | 52.941 | 68 | 32 | 0 | 55 | 122 | 97 | 164 | 1.31e-21 | 90.9 |
MS.gene26055.t1 | AT4G32730 | 52.941 | 68 | 32 | 0 | 55 | 122 | 97 | 164 | 1.31e-21 | 90.9 |
MS.gene26055.t1 | AT4G32730 | 52.941 | 68 | 32 | 0 | 55 | 122 | 97 | 164 | 1.42e-21 | 90.9 |
MS.gene26055.t1 | AT3G55730 | 49.275 | 69 | 35 | 0 | 54 | 122 | 65 | 133 | 9.40e-17 | 76.6 |
MS.gene26055.t1 | AT4G33450 | 47.761 | 67 | 35 | 0 | 56 | 122 | 30 | 96 | 1.33e-16 | 74.7 |
MS.gene26055.t1 | AT3G09230 | 50.000 | 68 | 34 | 0 | 55 | 122 | 65 | 132 | 1.63e-16 | 75.9 |
MS.gene26055.t1 | AT3G29020 | 40.196 | 102 | 60 | 1 | 56 | 157 | 76 | 176 | 9.95e-16 | 72.0 |
MS.gene26055.t1 | AT3G29020 | 49.254 | 67 | 34 | 0 | 56 | 122 | 78 | 144 | 2.02e-15 | 72.0 |
MS.gene26055.t1 | AT4G37260 | 47.059 | 68 | 36 | 0 | 55 | 122 | 23 | 90 | 2.31e-15 | 72.0 |
MS.gene26055.t1 | AT4G00540 | 58.182 | 55 | 23 | 0 | 68 | 122 | 129 | 183 | 4.42e-15 | 71.6 |
MS.gene26055.t1 | AT3G11440 | 41.667 | 72 | 41 | 1 | 54 | 124 | 52 | 123 | 4.89e-15 | 71.6 |
MS.gene26055.t1 | AT4G00540 | 58.182 | 55 | 23 | 0 | 68 | 122 | 127 | 181 | 5.26e-15 | 71.6 |
MS.gene26055.t1 | AT3G11440 | 41.667 | 72 | 41 | 1 | 54 | 124 | 52 | 123 | 5.61e-15 | 71.6 |
MS.gene26055.t1 | AT3G11440 | 41.667 | 72 | 41 | 1 | 54 | 124 | 52 | 123 | 5.61e-15 | 71.6 |
MS.gene26055.t1 | AT3G11440 | 41.667 | 72 | 41 | 1 | 54 | 124 | 52 | 123 | 5.61e-15 | 71.6 |
MS.gene26055.t1 | AT1G17950 | 44.776 | 67 | 37 | 0 | 56 | 122 | 16 | 82 | 6.95e-15 | 70.1 |
MS.gene26055.t1 | AT3G50060 | 43.284 | 67 | 38 | 0 | 56 | 122 | 17 | 83 | 1.22e-14 | 70.1 |
MS.gene26055.t1 | AT1G69560 | 44.776 | 67 | 37 | 0 | 56 | 122 | 134 | 200 | 3.25e-14 | 68.9 |
MS.gene26055.t1 | AT1G69560 | 44.776 | 67 | 37 | 0 | 56 | 122 | 118 | 184 | 3.29e-14 | 68.9 |
MS.gene26055.t1 | AT1G26780 | 44.776 | 67 | 37 | 0 | 56 | 122 | 109 | 175 | 3.61e-14 | 68.6 |
MS.gene26055.t1 | AT1G26780 | 44.776 | 67 | 37 | 0 | 56 | 122 | 109 | 175 | 5.06e-14 | 68.6 |
MS.gene26055.t1 | AT5G67300 | 44.776 | 67 | 37 | 0 | 56 | 122 | 17 | 83 | 6.34e-14 | 68.2 |
MS.gene26055.t1 | AT3G12720 | 44.118 | 68 | 37 | 1 | 56 | 122 | 35 | 102 | 7.17e-14 | 67.8 |
MS.gene26055.t1 | AT2G23290 | 45.588 | 68 | 37 | 0 | 55 | 122 | 23 | 90 | 7.56e-14 | 67.8 |
MS.gene26055.t1 | AT2G26960 | 43.056 | 72 | 40 | 1 | 55 | 125 | 32 | 103 | 1.15e-13 | 67.8 |
MS.gene26055.t1 | AT5G17800 | 46.269 | 67 | 36 | 0 | 56 | 122 | 104 | 170 | 1.23e-13 | 67.4 |
MS.gene26055.t1 | AT3G13890 | 42.647 | 68 | 38 | 1 | 56 | 122 | 25 | 92 | 2.82e-13 | 66.6 |
MS.gene26055.t1 | AT1G14350 | 41.176 | 68 | 40 | 0 | 55 | 122 | 35 | 102 | 3.35e-13 | 66.6 |
MS.gene26055.t1 | AT1G14350 | 41.176 | 68 | 40 | 0 | 55 | 122 | 35 | 102 | 3.35e-13 | 66.6 |
MS.gene26055.t1 | AT3G28470 | 40.964 | 83 | 41 | 3 | 55 | 136 | 25 | 100 | 3.44e-13 | 66.2 |
MS.gene26055.t1 | AT2G32460 | 40.000 | 85 | 42 | 3 | 54 | 136 | 29 | 106 | 3.91e-13 | 66.2 |
MS.gene26055.t1 | AT1G09540 | 39.759 | 83 | 42 | 3 | 55 | 136 | 25 | 100 | 4.35e-13 | 65.9 |
MS.gene26055.t1 | AT4G01680 | 37.805 | 82 | 44 | 2 | 56 | 136 | 25 | 100 | 5.55e-13 | 64.7 |
MS.gene26055.t1 | AT2G39880 | 41.176 | 68 | 40 | 0 | 55 | 122 | 60 | 127 | 5.90e-13 | 65.5 |
MS.gene26055.t1 | AT3G13890 | 38.961 | 77 | 37 | 1 | 56 | 122 | 25 | 101 | 6.69e-13 | 65.5 |
MS.gene26055.t1 | AT4G01680 | 37.805 | 82 | 44 | 2 | 56 | 136 | 25 | 100 | 6.90e-13 | 65.5 |
MS.gene26055.t1 | AT1G57560 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 7.00e-13 | 64.7 |
MS.gene26055.t1 | AT1G57560 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 8.24e-13 | 65.1 |
MS.gene26055.t1 | AT4G05100 | 41.463 | 82 | 41 | 2 | 56 | 136 | 26 | 101 | 1.03e-12 | 64.7 |
MS.gene26055.t1 | AT5G26660 | 39.286 | 84 | 34 | 2 | 53 | 136 | 3 | 69 | 1.05e-12 | 64.7 |
MS.gene26055.t1 | AT5G65230 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 1.12e-12 | 64.7 |
MS.gene26055.t1 | AT5G06100 | 39.130 | 69 | 41 | 1 | 55 | 122 | 44 | 112 | 1.16e-12 | 65.1 |
MS.gene26055.t1 | AT5G06100 | 39.130 | 69 | 41 | 1 | 55 | 122 | 44 | 112 | 1.22e-12 | 65.1 |
MS.gene26055.t1 | AT5G06100 | 39.130 | 69 | 41 | 1 | 55 | 122 | 44 | 112 | 1.22e-12 | 65.1 |
MS.gene26055.t1 | AT5G06100 | 39.130 | 69 | 41 | 1 | 55 | 122 | 44 | 112 | 1.22e-12 | 65.1 |
MS.gene26055.t1 | AT5G06100 | 39.130 | 69 | 41 | 1 | 55 | 122 | 44 | 112 | 1.22e-12 | 65.1 |
MS.gene26055.t1 | AT4G21440 | 41.463 | 82 | 41 | 2 | 56 | 136 | 25 | 100 | 1.43e-12 | 64.3 |
MS.gene26055.t1 | AT5G26660 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 1.44e-12 | 64.3 |
MS.gene26055.t1 | AT5G16770 | 40.964 | 83 | 39 | 3 | 58 | 136 | 24 | 100 | 1.87e-12 | 63.9 |
MS.gene26055.t1 | AT5G16770 | 40.964 | 83 | 39 | 3 | 58 | 136 | 24 | 100 | 1.87e-12 | 63.9 |
MS.gene26055.t1 | AT5G55020 | 37.349 | 83 | 45 | 2 | 55 | 136 | 38 | 114 | 2.02e-12 | 64.3 |
MS.gene26055.t1 | AT2G02820 | 44.068 | 59 | 33 | 0 | 64 | 122 | 49 | 107 | 2.42e-12 | 63.9 |
MS.gene26055.t1 | AT5G10280 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 2.42e-12 | 63.9 |
MS.gene26055.t1 | AT2G02820 | 44.068 | 59 | 33 | 0 | 64 | 122 | 49 | 107 | 2.45e-12 | 63.9 |
MS.gene26055.t1 | AT4G01680 | 34.043 | 94 | 43 | 2 | 56 | 136 | 25 | 112 | 2.49e-12 | 63.9 |
MS.gene26055.t1 | AT5G16770 | 43.478 | 69 | 35 | 2 | 58 | 122 | 24 | 92 | 2.72e-12 | 63.5 |
MS.gene26055.t1 | AT5G16770 | 43.478 | 69 | 35 | 2 | 58 | 122 | 24 | 92 | 2.72e-12 | 63.5 |
MS.gene26055.t1 | AT5G39700 | 43.284 | 67 | 38 | 0 | 56 | 122 | 67 | 133 | 2.76e-12 | 62.0 |
MS.gene26055.t1 | AT2G02820 | 44.068 | 59 | 33 | 0 | 64 | 122 | 49 | 107 | 3.47e-12 | 63.2 |
MS.gene26055.t1 | AT4G38620 | 49.153 | 59 | 24 | 1 | 78 | 136 | 48 | 100 | 3.87e-12 | 62.8 |
MS.gene26055.t1 | AT2G32460 | 40.000 | 85 | 42 | 3 | 54 | 136 | 17 | 94 | 3.97e-12 | 63.5 |
MS.gene26055.t1 | AT5G12870 | 41.463 | 82 | 41 | 2 | 56 | 136 | 31 | 106 | 4.09e-12 | 62.8 |
MS.gene26055.t1 | AT4G26930 | 33.663 | 101 | 57 | 3 | 37 | 136 | 16 | 107 | 4.24e-12 | 63.2 |
MS.gene26055.t1 | AT1G34670 | 41.176 | 68 | 39 | 1 | 56 | 122 | 25 | 92 | 4.30e-12 | 63.2 |
MS.gene26055.t1 | AT1G22640 | 39.759 | 83 | 43 | 2 | 55 | 136 | 24 | 100 | 4.62e-12 | 62.4 |
MS.gene26055.t1 | AT4G28110 | 40.244 | 82 | 42 | 2 | 56 | 136 | 25 | 100 | 5.11e-12 | 62.4 |
MS.gene26055.t1 | AT3G61250 | 39.759 | 83 | 43 | 2 | 55 | 136 | 24 | 100 | 5.55e-12 | 62.4 |
MS.gene26055.t1 | AT4G09460 | 40.244 | 82 | 42 | 2 | 56 | 136 | 25 | 100 | 7.22e-12 | 61.6 |
MS.gene26055.t1 | AT5G54230 | 42.647 | 68 | 38 | 1 | 56 | 122 | 25 | 92 | 9.56e-12 | 62.0 |
MS.gene26055.t1 | AT5G56110 | 39.024 | 82 | 43 | 2 | 56 | 136 | 25 | 100 | 1.03e-11 | 62.0 |
MS.gene26055.t1 | AT5G14750 | 38.554 | 83 | 44 | 2 | 55 | 136 | 28 | 104 | 1.30e-11 | 60.5 |
MS.gene26055.t1 | AT3G23250 | 38.095 | 84 | 43 | 3 | 55 | 136 | 24 | 100 | 1.30e-11 | 61.6 |
MS.gene26055.t1 | AT3G53200 | 39.759 | 83 | 41 | 3 | 56 | 136 | 22 | 97 | 1.31e-11 | 60.8 |
MS.gene26055.t1 | AT5G59780 | 38.554 | 83 | 44 | 2 | 55 | 136 | 20 | 96 | 1.67e-11 | 60.5 |
MS.gene26055.t1 | AT3G46130 | 39.759 | 83 | 43 | 2 | 55 | 136 | 21 | 97 | 2.27e-11 | 60.5 |
MS.gene26055.t1 | AT1G73410 | 44.776 | 67 | 37 | 0 | 56 | 122 | 17 | 83 | 3.30e-11 | 59.3 |
MS.gene26055.t1 | AT5G52600 | 39.759 | 83 | 43 | 2 | 55 | 136 | 24 | 100 | 3.78e-11 | 59.3 |
MS.gene26055.t1 | AT1G73410 | 44.776 | 67 | 37 | 0 | 56 | 122 | 17 | 83 | 3.80e-11 | 59.7 |
MS.gene26055.t1 | AT3G08500 | 44.286 | 70 | 32 | 2 | 68 | 136 | 55 | 118 | 3.99e-11 | 60.5 |
MS.gene26055.t1 | AT1G79180 | 38.554 | 83 | 42 | 3 | 56 | 136 | 27 | 102 | 5.37e-11 | 59.7 |
MS.gene26055.t1 | AT2G16720 | 45.763 | 59 | 26 | 1 | 78 | 136 | 48 | 100 | 5.52e-11 | 59.7 |
MS.gene26055.t1 | AT1G63910 | 40.244 | 82 | 42 | 2 | 56 | 136 | 25 | 100 | 5.97e-11 | 60.1 |
MS.gene26055.t1 | AT3G01530 | 37.349 | 83 | 45 | 2 | 55 | 136 | 37 | 113 | 6.26e-11 | 58.5 |
MS.gene26055.t1 | AT3G27920 | 36.905 | 84 | 46 | 2 | 54 | 136 | 25 | 102 | 6.67e-11 | 58.9 |
MS.gene26055.t1 | AT3G02940 | 39.706 | 68 | 40 | 1 | 56 | 122 | 25 | 92 | 7.87e-11 | 59.3 |
MS.gene26055.t1 | AT3G02940 | 39.706 | 68 | 40 | 1 | 56 | 122 | 25 | 92 | 9.46e-11 | 59.3 |
MS.gene26055.t1 | AT3G02940 | 39.706 | 68 | 40 | 1 | 56 | 122 | 25 | 92 | 9.46e-11 | 59.3 |
MS.gene26055.t1 | AT4G34990 | 47.458 | 59 | 25 | 1 | 78 | 136 | 48 | 100 | 9.91e-11 | 58.9 |
Find 43 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAACACTAGCAAAGGAATT+TGG | 0.146907 | 7.4:+54146057 | MS.gene26055:CDS |
GGTTCTTCCTCTTGGCATTT+TGG | 0.165983 | 7.4:-54148887 | None:intergenic |
GTATGACTTCCATCTTATTA+TGG | 0.228235 | 7.4:-54146025 | None:intergenic |
GTGGTTCTTGATGGAGTTCT+TGG | 0.268414 | 7.4:-54148844 | None:intergenic |
TCCAATTGGTGGATCACTTT+GGG | 0.286919 | 7.4:+54146523 | MS.gene26055:CDS |
ACTTCCATCTTATTATGGTT+TGG | 0.326900 | 7.4:-54146020 | None:intergenic |
GGCGTTCCAGTGGTTCTTGA+TGG | 0.329167 | 7.4:-54148853 | None:intergenic |
TAACACTAGCAAAGGAATTT+GGG | 0.340692 | 7.4:+54146058 | MS.gene26055:CDS |
TATGATTTCAGAAGGATTCA+TGG | 0.372361 | 7.4:+54148734 | MS.gene26055:intron |
TTGTAGGGTTCTTGTCCAAT+TGG | 0.386156 | 7.4:+54146509 | MS.gene26055:intron |
CCATCTTCGACCAGACATTA+AGG | 0.396221 | 7.4:+54146620 | MS.gene26055:CDS |
TTTCATAAACTTAGCAATAC+AGG | 0.405950 | 7.4:-54146559 | None:intergenic |
AAGTTTATGAAAGGCAGAAC+TGG | 0.415305 | 7.4:+54146570 | MS.gene26055:CDS |
CTTACCCCGGTTCTTCCTCT+TGG | 0.419409 | 7.4:-54148895 | None:intergenic |
GTCCAATTGGTGGATCACTT+TGG | 0.421631 | 7.4:+54146522 | MS.gene26055:CDS |
AAAATGCCAAGAGGAAGAAC+CGG | 0.423904 | 7.4:+54148889 | MS.gene26055:CDS |
ATCACTTTGGGCTAAGAAAA+TGG | 0.428054 | 7.4:+54146535 | MS.gene26055:CDS |
ATCGAAGCTCACAAAATAGT+TGG | 0.446030 | 7.4:+54148781 | MS.gene26055:CDS |
TAGGGTTCTTGTCCAATTGG+TGG | 0.446482 | 7.4:+54146512 | MS.gene26055:intron |
ATGGAGTTCTTGGTGCGTCC+TGG | 0.459822 | 7.4:-54148834 | None:intergenic |
GCCCAAAGTGATCCACCAAT+TGG | 0.461579 | 7.4:-54146524 | None:intergenic |
TGGTGAAACTTCACAACCTC+GGG | 0.489214 | 7.4:+54146109 | MS.gene26055:CDS |
AAGAATGAGACCTTAATGTC+TGG | 0.513472 | 7.4:-54146630 | None:intergenic |
TTCCCTTTGAACTCTTACCC+CGG | 0.526884 | 7.4:-54148908 | None:intergenic |
CCTTAATGTCTGGTCGAAGA+TGG | 0.530937 | 7.4:-54146620 | None:intergenic |
ACAAAATAGTTGGAAACAAG+TGG | 0.538861 | 7.4:+54148791 | MS.gene26055:CDS |
TGAAATTCAAGAAGATTGCC+AGG | 0.542608 | 7.4:+54148816 | MS.gene26055:CDS |
TGTATTGCTAAGTTTATGAA+AGG | 0.547549 | 7.4:+54146561 | MS.gene26055:CDS |
TGCACCAAACCATAATAAGA+TGG | 0.552990 | 7.4:+54146016 | MS.gene26055:CDS |
AAATGCCAAGAGGAAGAACC+GGG | 0.554441 | 7.4:+54148890 | MS.gene26055:CDS |
AAATTCTCTCTGATACCCAT+TGG | 0.560239 | 7.4:-54145967 | None:intergenic |
AGAACTCCATCAAGAACCAC+TGG | 0.561205 | 7.4:+54148847 | MS.gene26055:CDS |
AACCGGGGTAAGAGTTCAAA+GGG | 0.562064 | 7.4:+54148906 | MS.gene26055:CDS |
GGCGCTTAGTGGCGTTCCAG+TGG | 0.575961 | 7.4:-54148863 | None:intergenic |
GAACCGGGGTAAGAGTTCAA+AGG | 0.590922 | 7.4:+54148905 | MS.gene26055:CDS |
GAAAACAGTGCAGAGAGAGA+TGG | 0.592975 | 7.4:+54146592 | MS.gene26055:CDS |
GGTCGTCTTAACACTAGCAA+AGG | 0.596222 | 7.4:+54146050 | MS.gene26055:CDS |
GGATTCATGGTCTGAAGAGG+AGG | 0.599345 | 7.4:+54148747 | MS.gene26055:CDS |
GAAGGATTCATGGTCTGAAG+AGG | 0.605924 | 7.4:+54148744 | MS.gene26055:intron |
AATAAGATGGAAGTCATACA+TGG | 0.614721 | 7.4:+54146029 | MS.gene26055:CDS |
ATGGTGAAACTTCACAACCT+CGG | 0.620631 | 7.4:+54146108 | MS.gene26055:CDS |
AGCGCCGCCAAAATGCCAAG+AGG | 0.692200 | 7.4:+54148880 | MS.gene26055:CDS |
AATGCCAAGAGGAAGAACCG+GGG | 0.791379 | 7.4:+54148891 | MS.gene26055:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCATAAATACTTAATAAA+CGG | - | chr7.4:54148167-54148186 | None:intergenic | 10.0% |
!! | TGTTAATTATATTTAATGTA+AGG | - | chr7.4:54148686-54148705 | None:intergenic | 10.0% |
!! | TTTAATGAATTAAAAAGAAA+GGG | - | chr7.4:54147416-54147435 | None:intergenic | 10.0% |
!!! | TCTTTATCTATTTTTAATTT+TGG | + | chr7.4:54147499-54147518 | MS.gene26055:intron | 10.0% |
!!! | TTTTAATGAATTAAAAAGAA+AGG | - | chr7.4:54147417-54147436 | None:intergenic | 10.0% |
!! | AATAAAACGAAAACAAATTA+TGG | + | chr7.4:54146788-54146807 | MS.gene26055:intron | 15.0% |
!! | ACAAAAAATTTCTTTCAATA+TGG | + | chr7.4:54146089-54146108 | MS.gene26055:CDS | 15.0% |
!! | ATTTACATAGATTTATTAAG+CGG | + | chr7.4:54148385-54148404 | MS.gene26055:intron | 15.0% |
!! | CAATAAAAAAGTAATAGATA+AGG | - | chr7.4:54147237-54147256 | None:intergenic | 15.0% |
!! | CTATTAATTAAAAACAGTTA+TGG | - | chr7.4:54147140-54147159 | None:intergenic | 15.0% |
!! | TAGTTTAATATTCATTTCAT+TGG | + | chr7.4:54146898-54146917 | MS.gene26055:intron | 15.0% |
!! | TCCAAAAATTGATTAAAAAA+AGG | - | chr7.4:54147320-54147339 | None:intergenic | 15.0% |
!!! | ATGTGTTTATGATTTTATAA+AGG | + | chr7.4:54146850-54146869 | MS.gene26055:intron | 15.0% |
!!! | CAATTTTATATAATCAATGT+AGG | - | chr7.4:54147607-54147626 | None:intergenic | 15.0% |
!!! | TCAAATATTTTATCATACAT+TGG | + | chr7.4:54148267-54148286 | MS.gene26055:intron | 15.0% |
!!! | TCCTTTTTTTAATCAATTTT+TGG | + | chr7.4:54147316-54147335 | MS.gene26055:intron | 15.0% |
!!! | TGTTTTTAATTAATAGTTGA+GGG | + | chr7.4:54147144-54147163 | MS.gene26055:intron | 15.0% |
!!! | TTGTTTAAAATCTAATATTG+AGG | + | chr7.4:54147453-54147472 | MS.gene26055:intron | 15.0% |
!!! | TTTAACAAGAGATTTTTTAA+GGG | + | chr7.4:54148414-54148433 | MS.gene26055:intron | 15.0% |
!! | AAAAAAATACCTACGAAAAA+AGG | - | chr7.4:54147180-54147199 | None:intergenic | 20.0% |
!! | AAAAAATACCTACGAAAAAA+GGG | - | chr7.4:54147179-54147198 | None:intergenic | 20.0% |
!! | AATTTGTAAGTATTTGATAG+AGG | + | chr7.4:54147707-54147726 | MS.gene26055:intron | 20.0% |
!! | TCTATCAAATACTTACAAAT+TGG | - | chr7.4:54147708-54147727 | None:intergenic | 20.0% |
!! | TTAAACTATACTAAATTTGC+AGG | + | chr7.4:54148317-54148336 | MS.gene26055:intron | 20.0% |
!! | TTATGAAATTGTGGTATATA+TGG | - | chr7.4:54148544-54148563 | None:intergenic | 20.0% |
!!! | ATAGATGAATTTTACACAAA+TGG | + | chr7.4:54147531-54147550 | MS.gene26055:intron | 20.0% |
!!! | CTGTTTTTAATTAATAGTTG+AGG | + | chr7.4:54147143-54147162 | MS.gene26055:intron | 20.0% |
!!! | CTTTAACAAGAGATTTTTTA+AGG | + | chr7.4:54148413-54148432 | MS.gene26055:intron | 20.0% |
!!! | GTTTTTAATTAATAGTTGAG+GGG | + | chr7.4:54147145-54147164 | MS.gene26055:intron | 20.0% |
!!! | TCTATATTTGTCATTTCAAA+TGG | - | chr7.4:54148365-54148384 | None:intergenic | 20.0% |
! | AAAATAGACAACTAAAGTAG+TGG | - | chr7.4:54146953-54146972 | None:intergenic | 25.0% |
! | AACAGTTATGGATAAAACTT+AGG | - | chr7.4:54147128-54147147 | None:intergenic | 25.0% |
! | AGAATCAGTCATTACTAAAT+TGG | + | chr7.4:54148645-54148664 | MS.gene26055:intron | 25.0% |
! | ATAAAAAGGAAAGATTGACT+TGG | - | chr7.4:54147785-54147804 | None:intergenic | 25.0% |
! | ATAGATAAGGAAATAAAGAG+TGG | - | chr7.4:54147224-54147243 | None:intergenic | 25.0% |
! | ATGAATTAAAAAGAAAGGGA+AGG | - | chr7.4:54147412-54147431 | None:intergenic | 25.0% |
! | CTAACAAAAACATATGTGAA+AGG | - | chr7.4:54147581-54147600 | None:intergenic | 25.0% |
! | CTTACAAATGAGACATAAAA+AGG | - | chr7.4:54147799-54147818 | None:intergenic | 25.0% |
! | GAAAGAGTTAAGTTATAAGA+AGG | - | chr7.4:54147752-54147771 | None:intergenic | 25.0% |
! | GAATAATGAAATTCAACACA+AGG | + | chr7.4:54146301-54146320 | MS.gene26055:intron | 25.0% |
! | TGTATTGCTAAGTTTATGAA+AGG | + | chr7.4:54146561-54146580 | MS.gene26055:CDS | 25.0% |
! | TTGGTCTATATGTGTTAAAT+TGG | + | chr7.4:54148465-54148484 | MS.gene26055:intron | 25.0% |
! | TTGTTATGTATGATTTCAGA+AGG | + | chr7.4:54148726-54148745 | MS.gene26055:intron | 25.0% |
! | TTTCATAAACTTAGCAATAC+AGG | - | chr7.4:54146562-54146581 | None:intergenic | 25.0% |
! | TTTCTTGCTTTATGAAATTG+TGG | - | chr7.4:54148553-54148572 | None:intergenic | 25.0% |
!! | ACAAATTACTTCTTGATGAT+AGG | - | chr7.4:54147011-54147030 | None:intergenic | 25.0% |
!!! | AAGAGTGTTATTCATACAAT+TGG | + | chr7.4:54148446-54148465 | MS.gene26055:intron | 25.0% |
!!! | ATTATTTACCCTTTTTTCGT+AGG | + | chr7.4:54147168-54147187 | MS.gene26055:intron | 25.0% |
!!! | TGTTTTTGTCCTTTATTCAA+GGG | + | chr7.4:54147261-54147280 | MS.gene26055:intron | 25.0% |
AAATCCAGAGAAAATGATCA+AGG | + | chr7.4:54146236-54146255 | MS.gene26055:intron | 30.0% | |
AAGGATCTCAATCAAATCAA+GGG | + | chr7.4:54146320-54146339 | MS.gene26055:intron | 30.0% | |
AATAAGATGGAAGTCATACA+TGG | + | chr7.4:54146029-54146048 | MS.gene26055:CDS | 30.0% | |
ACAAAATAGTTGGAAACAAG+TGG | + | chr7.4:54148791-54148810 | MS.gene26055:CDS | 30.0% | |
ACTTCCATCTTATTATGGTT+TGG | - | chr7.4:54146023-54146042 | None:intergenic | 30.0% | |
AGATATTCAACTTCAAGTGT+TGG | - | chr7.4:54148206-54148225 | None:intergenic | 30.0% | |
ATATAAGCCATGTAAGCTTA+TGG | + | chr7.4:54148226-54148245 | MS.gene26055:intron | 30.0% | |
ATCATACATAACAATGTGTG+TGG | - | chr7.4:54148720-54148739 | None:intergenic | 30.0% | |
ATGTAATTAGAAACAGAGCA+TGG | - | chr7.4:54148027-54148046 | None:intergenic | 30.0% | |
CATGAGTTTCTTTCACTTAA+TGG | + | chr7.4:54147646-54147665 | MS.gene26055:intron | 30.0% | |
GATAGAGAATCATAAACAAG+AGG | - | chr7.4:54148515-54148534 | None:intergenic | 30.0% | |
GTATGACTTCCATCTTATTA+TGG | - | chr7.4:54146028-54146047 | None:intergenic | 30.0% | |
TAACACTAGCAAAGGAATTT+GGG | + | chr7.4:54146058-54146077 | MS.gene26055:CDS | 30.0% | |
TATGATTTCAGAAGGATTCA+TGG | + | chr7.4:54148734-54148753 | MS.gene26055:intron | 30.0% | |
TCAATTAATCATGAGCTTCA+AGG | + | chr7.4:54146182-54146201 | MS.gene26055:intron | 30.0% | |
TCCTATCAAAATAATTCCTG+TGG | + | chr7.4:54147996-54148015 | MS.gene26055:intron | 30.0% | |
TTAACACTAGCAAAGGAATT+TGG | + | chr7.4:54146057-54146076 | MS.gene26055:CDS | 30.0% | |
! | GTTTTTGTCCTTTATTCAAG+GGG | + | chr7.4:54147262-54147281 | MS.gene26055:intron | 30.0% |
!!! | ATTTTTGGAGCATGTGATAT+AGG | + | chr7.4:54147331-54147350 | MS.gene26055:intron | 30.0% |
!!! | CTGTTTTTGTCCTTTATTCA+AGG | + | chr7.4:54147260-54147279 | MS.gene26055:intron | 30.0% |
!!! | GGAATTATTTTGATAGGAAG+CGG | - | chr7.4:54147994-54148013 | None:intergenic | 30.0% |
!!! | TCCACAGGAATTATTTTGAT+AGG | - | chr7.4:54148000-54148019 | None:intergenic | 30.0% |
AAACCAAACCCCTTGAATAA+AGG | - | chr7.4:54147273-54147292 | None:intergenic | 35.0% | |
AAGAATGAGACCTTAATGTC+TGG | - | chr7.4:54146633-54146652 | None:intergenic | 35.0% | |
AAGTTTATGAAAGGCAGAAC+TGG | + | chr7.4:54146570-54146589 | MS.gene26055:CDS | 35.0% | |
AGAGGTGAAAATTTGAACTC+AGG | + | chr7.4:54147725-54147744 | MS.gene26055:intron | 35.0% | |
ATAGCATGTATTTGTTCCCA+CGG | - | chr7.4:54148605-54148624 | None:intergenic | 35.0% | |
ATCACTTTGGGCTAAGAAAA+TGG | + | chr7.4:54146535-54146554 | MS.gene26055:CDS | 35.0% | |
ATCGAAGCTCACAAAATAGT+TGG | + | chr7.4:54148781-54148800 | MS.gene26055:CDS | 35.0% | |
CAAGGATCTCAATCAAATCA+AGG | + | chr7.4:54146319-54146338 | MS.gene26055:intron | 35.0% | |
TCAATCAAATCAAGGGACAA+TGG | + | chr7.4:54146327-54146346 | MS.gene26055:intron | 35.0% | |
TGAAATTCAAGAAGATTGCC+AGG | + | chr7.4:54148816-54148835 | MS.gene26055:CDS | 35.0% | |
TGCACCAAACCATAATAAGA+TGG | + | chr7.4:54146016-54146035 | MS.gene26055:CDS | 35.0% | |
! | AAGGAAAAGAGTGTACAAGA+AGG | - | chr7.4:54147301-54147320 | None:intergenic | 35.0% |
! | AATGGACTTCAAATGAGGAT+CGG | + | chr7.4:54146345-54146364 | MS.gene26055:intron | 35.0% |
! | AGGAAAAGAGTGTACAAGAA+GGG | - | chr7.4:54147300-54147319 | None:intergenic | 35.0% |
! | CTTTCATGCAATGATGGAAT+TGG | + | chr7.4:54146209-54146228 | MS.gene26055:intron | 35.0% |
! | GAATCCTTGATCATTTTCTC+TGG | - | chr7.4:54146243-54146262 | None:intergenic | 35.0% |
! | TTTATTCAAGGGGTTTGGTT+TGG | + | chr7.4:54147272-54147291 | MS.gene26055:intron | 35.0% |
!! | AAAAGGAAAGATTGACTTGG+TGG | - | chr7.4:54147782-54147801 | None:intergenic | 35.0% |
AAAATGCCAAGAGGAAGAAC+CGG | + | chr7.4:54148889-54148908 | MS.gene26055:CDS | 40.0% | |
ATGGTGAAACTTCACAACCT+CGG | + | chr7.4:54146108-54146127 | MS.gene26055:CDS | 40.0% | |
GGAGATCTTTCATGCAATGA+TGG | + | chr7.4:54146203-54146222 | MS.gene26055:intron | 40.0% | |
TGATCGACCATAAGCTTACA+TGG | - | chr7.4:54148236-54148255 | None:intergenic | 40.0% | |
TGGAGCATGTGATATAGGAT+GGG | + | chr7.4:54147336-54147355 | MS.gene26055:intron | 40.0% | |
TGTCCTTTATTCAAGGGGTT+TGG | + | chr7.4:54147267-54147286 | MS.gene26055:intron | 40.0% | |
TGTGCATCATAAGCTAGTGA+TGG | - | chr7.4:54146152-54146171 | None:intergenic | 40.0% | |
TTGGAGCATGTGATATAGGA+TGG | + | chr7.4:54147335-54147354 | MS.gene26055:intron | 40.0% | |
TTGTAGGGTTCTTGTCCAAT+TGG | + | chr7.4:54146509-54146528 | MS.gene26055:intron | 40.0% | |
! | CCAAGATTTTGTTCTCCTCA+CGG | + | chr7.4:54148574-54148593 | MS.gene26055:intron | 40.0% |
! | GGAAAAGAGTGTACAAGAAG+GGG | - | chr7.4:54147299-54147318 | None:intergenic | 40.0% |
! | TCATAAGCTAGTGATGGTGA+TGG | - | chr7.4:54146146-54146165 | None:intergenic | 40.0% |
! | TCCAATTGGTGGATCACTTT+GGG | + | chr7.4:54146523-54146542 | MS.gene26055:CDS | 40.0% |
!! | AAAAGAAAGGGAAGGCATCA+AGG | - | chr7.4:54147404-54147423 | None:intergenic | 40.0% |
!! | AAAGAAAGGGAAGGCATCAA+GGG | - | chr7.4:54147403-54147422 | None:intergenic | 40.0% |
AAATGCCAAGAGGAAGAACC+GGG | + | chr7.4:54148890-54148909 | MS.gene26055:CDS | 45.0% | |
AACCGGGGTAAGAGTTCAAA+GGG | + | chr7.4:54148906-54148925 | MS.gene26055:CDS | 45.0% | |
ACAGAGCATGGTTATTCCAC+AGG | - | chr7.4:54148015-54148034 | None:intergenic | 45.0% | |
AGAACTCCATCAAGAACCAC+TGG | + | chr7.4:54148847-54148866 | MS.gene26055:CDS | 45.0% | |
CCATCTTCGACCAGACATTA+AGG | + | chr7.4:54146620-54146639 | MS.gene26055:CDS | 45.0% | |
CCGTGAGGAGAACAAAATCT+TGG | - | chr7.4:54148577-54148596 | None:intergenic | 45.0% | |
CCTTAATGTCTGGTCGAAGA+TGG | - | chr7.4:54146623-54146642 | None:intergenic | 45.0% | |
GAAAACAGTGCAGAGAGAGA+TGG | + | chr7.4:54146592-54146611 | MS.gene26055:CDS | 45.0% | |
GAAGGATTCATGGTCTGAAG+AGG | + | chr7.4:54148744-54148763 | MS.gene26055:intron | 45.0% | |
GAGCATGTGATATAGGATGG+GGG | + | chr7.4:54147338-54147357 | MS.gene26055:intron | 45.0% | |
GGAGCATGTGATATAGGATG+GGG | + | chr7.4:54147337-54147356 | MS.gene26055:intron | 45.0% | |
GGTCGTCTTAACACTAGCAA+AGG | + | chr7.4:54146050-54146069 | MS.gene26055:CDS | 45.0% | |
GTGGTTCTTGATGGAGTTCT+TGG | - | chr7.4:54148847-54148866 | None:intergenic | 45.0% | |
TAGGGTTCTTGTCCAATTGG+TGG | + | chr7.4:54146512-54146531 | MS.gene26055:intron | 45.0% | |
TGGTGAAACTTCACAACCTC+GGG | + | chr7.4:54146109-54146128 | MS.gene26055:CDS | 45.0% | |
TTCCCTTTGAACTCTTACCC+CGG | - | chr7.4:54148911-54148930 | None:intergenic | 45.0% | |
! | GGGACAATGGACTTCAAATG+AGG | + | chr7.4:54146340-54146359 | MS.gene26055:intron | 45.0% |
! | GGTTCTTCCTCTTGGCATTT+TGG | - | chr7.4:54148890-54148909 | None:intergenic | 45.0% |
! | GTCCAATTGGTGGATCACTT+TGG | + | chr7.4:54146522-54146541 | MS.gene26055:CDS | 45.0% |
! | TCTTCCTCTTGGCATTTTGG+CGG | - | chr7.4:54148887-54148906 | None:intergenic | 45.0% |
!! | AAAGATTGACTTGGTGGCTG+AGG | - | chr7.4:54147776-54147795 | None:intergenic | 45.0% |
!! | AAGAAAGGGAAGGCATCAAG+GGG | - | chr7.4:54147402-54147421 | None:intergenic | 45.0% |
!! | AAAAAAAATAATAATAATCA+AGG | - | chr7.4:54146440-54146459 | None:intergenic | 5.0% |
!!! | AATTATTTTATATTTTTGTA+GGG | + | chr7.4:54146494-54146513 | MS.gene26055:intron | 5.0% |
!!! | TAATTATTTTATATTTTTGT+AGG | + | chr7.4:54146493-54146512 | MS.gene26055:intron | 5.0% |
AATGCCAAGAGGAAGAACCG+GGG | + | chr7.4:54148891-54148910 | MS.gene26055:CDS | 50.0% | |
ACTAGACATCCCAACCAGGT+TGG | - | chr7.4:54147377-54147396 | None:intergenic | 50.0% | |
ATATAGGATGGGGGCTGCTA+TGG | + | chr7.4:54147347-54147366 | MS.gene26055:intron | 50.0% | |
GAACCGGGGTAAGAGTTCAA+AGG | + | chr7.4:54148905-54148924 | MS.gene26055:CDS | 50.0% | |
GCATGTATTTGTTCCCACGG+TGG | - | chr7.4:54148602-54148621 | None:intergenic | 50.0% | |
GCCCAAAGTGATCCACCAAT+TGG | - | chr7.4:54146527-54146546 | None:intergenic | 50.0% | |
GGATTCATGGTCTGAAGAGG+AGG | + | chr7.4:54148747-54148766 | MS.gene26055:CDS | 50.0% | |
TCGTGCTCAGTGTCCAAAAG+CGG | + | chr7.4:54146261-54146280 | MS.gene26055:intron | 50.0% | |
! | TATGGAGTGCCAACCTGGTT+GGG | + | chr7.4:54147365-54147384 | MS.gene26055:intron | 50.0% |
!! | AGCTAGTGATGGTGATGGAG+AGG | - | chr7.4:54146141-54146160 | None:intergenic | 50.0% |
!! | GAATCCTCTTCAGCCGCTTT+TGG | - | chr7.4:54146277-54146296 | None:intergenic | 50.0% |
!! | GCTAGTGATGGTGATGGAGA+GGG | - | chr7.4:54146140-54146159 | None:intergenic | 50.0% |
CTTACCCCGGTTCTTCCTCT+TGG | - | chr7.4:54148898-54148917 | None:intergenic | 55.0% | |
GGCAACTAGACATCCCAACC+AGG | - | chr7.4:54147381-54147400 | None:intergenic | 55.0% | |
GGCGTTCCAGTGGTTCTTGA+TGG | - | chr7.4:54148856-54148875 | None:intergenic | 55.0% | |
GTGTCCAAAAGCGGCTGAAG+AGG | + | chr7.4:54146270-54146289 | MS.gene26055:intron | 55.0% | |
! | ATGGAGTTCTTGGTGCGTCC+TGG | - | chr7.4:54148837-54148856 | None:intergenic | 55.0% |
! | CTATGGAGTGCCAACCTGGT+TGG | + | chr7.4:54147364-54147383 | MS.gene26055:intron | 55.0% |
AGCGCCGCCAAAATGCCAAG+AGG | + | chr7.4:54148880-54148899 | MS.gene26055:CDS | 60.0% | |
GATGGAGAGGGACTTACCCG+AGG | - | chr7.4:54146128-54146147 | None:intergenic | 60.0% | |
! | GCTGCTATGGAGTGCCAACC+TGG | + | chr7.4:54147360-54147379 | MS.gene26055:intron | 60.0% |
!! | GGCATTTTGGCGGCGCTTAG+TGG | - | chr7.4:54148877-54148896 | None:intergenic | 60.0% |
GGCGCTTAGTGGCGTTCCAG+TGG | - | chr7.4:54148866-54148885 | None:intergenic | 65.0% | |
!! | TCTCCTCACGGTGCCACCGT+GGG | + | chr7.4:54148586-54148605 | MS.gene26055:intron | 65.0% |
!! | TTCTCCTCACGGTGCCACCG+TGG | + | chr7.4:54148585-54148604 | MS.gene26055:intron | 65.0% |
GTTCCCACGGTGGCACCGTG+AGG | - | chr7.4:54148592-54148611 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 54145970 | 54148942 | 54145970 | ID=MS.gene26055 |
chr7.4 | mRNA | 54145970 | 54148942 | 54145970 | ID=MS.gene26055.t1;Parent=MS.gene26055 |
chr7.4 | exon | 54145970 | 54146130 | 54145970 | ID=MS.gene26055.t1.exon1;Parent=MS.gene26055.t1 |
chr7.4 | CDS | 54145970 | 54146130 | 54145970 | ID=cds.MS.gene26055.t1;Parent=MS.gene26055.t1 |
chr7.4 | exon | 54146515 | 54146641 | 54146515 | ID=MS.gene26055.t1.exon2;Parent=MS.gene26055.t1 |
chr7.4 | CDS | 54146515 | 54146641 | 54146515 | ID=cds.MS.gene26055.t1;Parent=MS.gene26055.t1 |
chr7.4 | exon | 54148745 | 54148942 | 54148745 | ID=MS.gene26055.t1.exon3;Parent=MS.gene26055.t1 |
chr7.4 | CDS | 54148745 | 54148942 | 54148745 | ID=cds.MS.gene26055.t1;Parent=MS.gene26055.t1 |
Gene Sequence |
Protein sequence |