AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26064

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26064.t1 MTR_7g450950 78.761 339 60 2 1 328 1 338 0.0 546
MS.gene26064.t1 MTR_7g451170 43.305 351 156 7 14 327 34 378 3.24e-76 239
MS.gene26064.t1 MTR_7g037260 42.857 329 141 9 33 319 8 331 7.68e-74 232
MS.gene26064.t1 MTR_7g037130 42.216 334 144 10 29 319 4 331 8.68e-71 224
MS.gene26064.t1 MTR_7g035350 35.539 408 167 8 13 327 29 433 4.66e-67 217
MS.gene26064.t1 MTR_4g088015 43.333 300 138 6 13 285 63 357 4.77e-65 212
MS.gene26064.t1 MTR_1g057980 48.198 222 105 5 59 280 1 212 4.07e-59 192
MS.gene26064.t1 MTR_3g077650 56.849 146 60 1 136 281 171 313 6.65e-49 169
MS.gene26064.t1 MTR_4g105660 38.057 247 119 5 51 277 76 308 9.42e-47 163
MS.gene26064.t1 MTR_3g463400 54.545 132 56 2 145 273 132 262 5.07e-43 154
MS.gene26064.t1 MTR_5g049190 50.714 140 63 1 142 281 15 148 2.85e-42 147
MS.gene26064.t1 MTR_5g070020 50.746 134 62 1 145 274 121 254 6.20e-42 149
MS.gene26064.t1 MTR_7g061330 38.547 179 88 3 145 304 112 287 5.44e-32 125
MS.gene26064.t1 MTR_7g461410 38.547 179 88 3 145 304 112 287 5.44e-32 125
MS.gene26064.t1 MTR_7g061330 38.547 179 88 3 145 304 76 251 6.65e-32 125
MS.gene26064.t1 MTR_1g026870 52.336 107 50 1 145 250 84 190 1.03e-31 125
MS.gene26064.t1 MTR_3g110028 54.206 107 48 1 145 250 84 190 1.19e-31 125
MS.gene26064.t1 MTR_4g019370 50.000 100 50 0 145 244 37 136 1.63e-31 121
MS.gene26064.t1 MTR_3g101290 46.939 98 52 0 145 242 36 133 1.16e-29 113
MS.gene26064.t1 MTR_5g010650 51.042 96 47 0 145 240 109 204 3.99e-29 117
MS.gene26064.t1 MTR_5g082910 48.980 98 50 0 145 242 18 115 4.52e-28 110
MS.gene26064.t1 MTR_5g041570 43.443 122 64 1 146 267 134 250 7.14e-27 110
MS.gene26064.t1 MTR_4g094982 44.643 112 61 1 145 255 4 115 7.25e-27 107
MS.gene26064.t1 MTR_7g035300 37.500 200 76 6 114 310 45 198 2.75e-26 104
MS.gene26064.t1 MTR_4g082040 36.538 156 95 2 116 267 74 229 7.42e-26 107
MS.gene26064.t1 MTR_6g027340 36.364 165 98 2 132 289 2 166 7.81e-26 102
MS.gene26064.t1 MTR_5g016510 45.794 107 57 1 145 250 4 110 1.03e-25 105
MS.gene26064.t1 MTR_0008s0470 35.714 140 87 2 140 276 9 148 1.91e-25 103
MS.gene26064.t1 MTR_2g064160 42.453 106 59 2 146 249 13 118 4.24e-25 103
MS.gene26064.t1 MTR_0008s0390 38.889 126 72 3 146 268 15 138 4.46e-25 102
MS.gene26064.t1 MTR_3g052450 42.202 109 61 2 146 252 42 150 3.36e-24 103
MS.gene26064.t1 MTR_6g074860 44.792 96 53 0 146 241 4 99 4.23e-24 99.0
MS.gene26064.t1 MTR_3g065440 42.308 130 67 3 146 273 14 137 4.28e-24 100
MS.gene26064.t1 MTR_1g062940 44.211 95 52 1 146 239 8 102 7.33e-24 97.8
MS.gene26064.t1 MTR_3g097450 44.144 111 56 3 143 249 11 119 7.78e-24 99.4
MS.gene26064.t1 MTR_1g086530 31.884 207 109 7 146 327 35 234 8.11e-24 99.0
MS.gene26064.t1 MTR_0251s0050 39.823 113 64 2 146 257 15 124 9.66e-24 98.6
MS.gene26064.t1 MTR_6g015455 43.878 98 55 0 145 242 4 101 1.21e-23 102
MS.gene26064.t1 MTR_3g011610 35.294 136 86 2 119 252 12 147 1.60e-23 101
MS.gene26064.t1 MTR_4g102380 41.284 109 63 1 146 253 14 122 1.76e-23 97.8
MS.gene26064.t1 MTR_3g052430 41.284 109 62 2 146 252 43 151 2.21e-23 100
MS.gene26064.t1 MTR_4g100720 44.330 97 53 1 146 241 15 111 3.02e-23 94.7
MS.gene26064.t1 MTR_1g112760 38.679 106 61 2 146 250 15 117 3.53e-23 96.3
MS.gene26064.t1 MTR_6g027360 37.410 139 83 1 126 264 58 192 4.34e-23 97.8
MS.gene26064.t1 MTR_8g095390 41.284 109 62 2 143 249 11 119 5.73e-23 97.4
MS.gene26064.t1 MTR_6g027370 38.462 130 76 1 135 264 88 213 6.20e-23 97.8
MS.gene26064.t1 MTR_5g078140 41.818 110 61 2 146 253 14 122 8.59e-23 97.1
MS.gene26064.t1 MTR_3g077110 40.187 107 58 3 146 250 14 116 8.62e-23 97.4
MS.gene26064.t1 MTR_4g063100 38.318 107 65 1 146 251 9 115 9.00e-23 95.5
MS.gene26064.t1 MTR_5g029840 39.450 109 65 1 146 253 14 122 9.84e-23 97.1
MS.gene26064.t1 MTR_4g073420 43.396 106 55 2 142 244 10 113 1.29e-22 95.9
MS.gene26064.t1 MTR_1g086510 35.374 147 87 3 122 267 4 143 1.40e-22 95.5
MS.gene26064.t1 MTR_2g011660 39.316 117 69 2 146 261 15 130 2.17e-22 96.3
MS.gene26064.t1 MTR_8g020490 43.299 97 54 1 146 241 10 106 2.53e-22 94.4
MS.gene26064.t1 MTR_8g042410 42.202 109 61 2 146 252 39 147 2.73e-22 97.8
MS.gene26064.t1 MTR_8g017440 37.000 100 62 1 146 244 14 113 2.80e-22 95.9
MS.gene26064.t1 MTR_2g089450 39.474 114 64 2 146 258 14 123 3.24e-22 94.0
MS.gene26064.t1 MTR_1g045610 37.795 127 70 3 146 266 23 146 3.59e-22 94.0
MS.gene26064.t1 MTR_4g091490 38.017 121 73 2 146 265 15 134 3.88e-22 95.9
MS.gene26064.t1 MTR_5g088640 39.200 125 74 2 142 264 10 134 3.97e-22 94.4
MS.gene26064.t1 MTR_5g062790 41.667 108 61 2 144 249 9 116 4.26e-22 94.7
MS.gene26064.t1 MTR_5g088080 39.200 125 74 2 142 264 10 134 4.45e-22 94.0
MS.gene26064.t1 MTR_5g088150 39.200 125 74 2 142 264 10 134 4.45e-22 94.0
MS.gene26064.t1 MTR_5g488210 39.200 125 74 2 142 264 10 134 4.45e-22 94.0
MS.gene26064.t1 MTR_7g076740 44.340 106 56 3 146 248 14 119 4.85e-22 94.7
MS.gene26064.t1 MTR_8g027345 44.444 99 50 2 146 241 14 110 4.95e-22 94.7
MS.gene26064.t1 MTR_8g017540 37.000 100 62 1 146 244 60 159 5.73e-22 95.9
MS.gene26064.t1 MTR_2g089420 37.190 121 68 3 146 258 13 133 5.84e-22 96.3
MS.gene26064.t1 MTR_5g007370 40.367 109 64 1 146 253 14 122 6.01e-22 94.4
MS.gene26064.t1 MTR_1g021230 46.875 96 50 1 146 240 59 154 6.10e-22 96.3
MS.gene26064.t1 MTR_1g073170 40.000 95 56 1 146 239 22 116 6.52e-22 93.2
MS.gene26064.t1 MTR_5g010020 42.268 97 55 1 146 241 14 110 6.86e-22 94.7
MS.gene26064.t1 MTR_2g096380 41.000 100 58 1 146 244 8 107 7.68e-22 92.8
MS.gene26064.t1 MTR_8g031360 45.455 99 50 3 146 241 15 112 7.71e-22 94.0
MS.gene26064.t1 MTR_2g089620 41.667 108 60 2 146 250 14 121 8.36e-22 94.4
MS.gene26064.t1 MTR_3g089045 45.370 108 56 1 146 250 16 123 8.62e-22 93.6
MS.gene26064.t1 MTR_5g488170 42.056 107 60 2 142 246 10 116 1.06e-21 92.4
MS.gene26064.t1 MTR_7g117730 40.179 112 61 3 146 253 14 123 1.19e-21 92.8
MS.gene26064.t1 MTR_7g086960 46.875 96 51 0 146 241 89 184 1.20e-21 94.4
MS.gene26064.t1 MTR_4g125520 36.752 117 73 1 146 261 14 130 1.39e-21 93.6
MS.gene26064.t1 MTR_4g478180 40.367 109 64 1 146 253 15 123 1.45e-21 94.0
MS.gene26064.t1 MTR_2g099740 37.736 106 62 2 146 250 14 116 2.05e-21 94.4
MS.gene26064.t1 MTR_4g105130 34.646 127 78 3 146 271 14 136 2.11e-21 94.0
MS.gene26064.t1 MTR_7g035075 44.211 95 52 1 146 239 16 110 2.49e-21 90.5
MS.gene26064.t1 MTR_8g006470 41.509 106 60 2 143 246 9 114 2.68e-21 92.4
MS.gene26064.t1 MTR_3g028740 41.121 107 59 2 146 251 24 127 2.82e-21 93.2
MS.gene26064.t1 MTR_1g110460 35.714 112 71 1 146 256 28 139 2.96e-21 92.4
MS.gene26064.t1 MTR_8g017500 37.624 101 60 2 146 244 14 113 4.34e-21 92.8
MS.gene26064.t1 MTR_5g038910 36.567 134 83 1 126 259 8 139 4.39e-21 93.2
MS.gene26064.t1 MTR_5g038910 36.567 134 83 1 126 259 8 139 4.80e-21 93.6
MS.gene26064.t1 MTR_3g074520 32.886 149 96 3 146 293 14 159 5.27e-21 92.4
MS.gene26064.t1 MTR_5g079670 37.615 109 67 1 146 253 13 121 5.76e-21 89.7
MS.gene26064.t1 MTR_8g098860 40.206 97 57 1 146 241 14 110 7.93e-21 91.7
MS.gene26064.t1 MTR_2g097910 38.793 116 66 3 146 260 22 133 8.14e-21 91.7
MS.gene26064.t1 MTR_8g017350 39.252 107 60 3 146 250 14 117 8.36e-21 93.6
MS.gene26064.t1 MTR_8g017340 39.252 107 60 3 146 250 14 117 1.01e-20 92.8
MS.gene26064.t1 MTR_1g100653 36.800 125 74 2 146 267 14 136 1.52e-20 90.5
MS.gene26064.t1 MTR_4g065017 38.793 116 66 2 146 260 19 130 1.72e-20 90.9
MS.gene26064.t1 MTR_7g096930 41.414 99 53 2 146 241 14 110 1.75e-20 89.7
MS.gene26064.t1 MTR_6g006030 43.158 95 53 1 146 239 16 110 2.09e-20 88.2
MS.gene26064.t1 MTR_7g115650 40.816 98 53 2 146 240 14 109 2.35e-20 87.8
MS.gene26064.t1 MTR_8g017390 36.449 107 63 3 146 250 14 117 3.33e-20 91.3
MS.gene26064.t1 MTR_6g009430 34.513 113 73 1 142 253 10 122 3.99e-20 89.7
MS.gene26064.t1 MTR_5g088610 41.509 106 60 2 144 247 9 114 4.77e-20 89.7
MS.gene26064.t1 MTR_1g085040 35.514 107 65 2 146 251 14 117 6.20e-20 89.7
MS.gene26064.t1 MTR_0063s0090 41.121 107 59 3 146 249 14 119 7.72e-20 87.0
MS.gene26064.t1 MTR_1g085640 36.792 106 65 2 146 249 14 119 9.55e-20 89.4
MS.gene26064.t1 MTR_7g110830 37.736 106 64 2 146 249 14 119 1.03e-19 89.0
MS.gene26064.t1 MTR_4g029540 38.462 104 62 2 146 247 12 115 1.19e-19 87.8
MS.gene26064.t1 MTR_4g082290 36.697 109 68 1 146 253 14 122 1.29e-19 89.4
MS.gene26064.t1 MTR_1g017000 37.500 112 66 3 146 253 14 125 1.32e-19 87.0
MS.gene26064.t1 MTR_3g461490 34.862 109 70 1 146 253 14 122 1.62e-19 87.8
MS.gene26064.t1 MTR_2g034790 38.655 119 64 4 146 260 14 127 1.78e-19 87.8
MS.gene26064.t1 MTR_2g088170 44.144 111 56 3 146 252 31 139 1.92e-19 89.0
MS.gene26064.t1 MTR_1g043080 40.404 99 54 2 146 241 14 110 2.14e-19 86.3
MS.gene26064.t1 MTR_7g111290 38.542 96 58 1 146 240 14 109 2.39e-19 88.2
MS.gene26064.t1 MTR_4g485530 39.000 100 60 1 146 244 14 113 2.55e-19 84.7
MS.gene26064.t1 MTR_1g043050 39.669 121 65 4 146 261 14 131 2.57e-19 86.3
MS.gene26064.t1 MTR_5g042030 38.532 109 66 1 146 253 9 117 2.91e-19 86.7
MS.gene26064.t1 MTR_7g011170 33.846 130 84 2 146 273 14 143 4.50e-19 86.7
MS.gene26064.t1 MTR_3g039990 36.719 128 75 2 146 272 15 137 4.75e-19 86.3
MS.gene26064.t1 MTR_4g082230 35.780 109 69 1 146 253 14 122 4.93e-19 87.4
MS.gene26064.t1 MTR_5g014990 37.815 119 69 3 146 262 14 129 7.72e-19 85.9
MS.gene26064.t1 MTR_7g010210 38.261 115 67 2 146 259 14 125 9.26e-19 85.1
MS.gene26064.t1 MTR_0197s0010 34.646 127 79 3 149 272 6 131 1.15e-18 84.0
MS.gene26064.t1 MTR_7g017260 39.394 99 57 1 146 241 27 125 1.15e-18 84.7
MS.gene26064.t1 MTR_4g121460 38.182 110 62 3 146 251 14 121 1.21e-18 85.5
MS.gene26064.t1 MTR_7g010210 38.938 113 65 2 146 257 14 123 1.28e-18 85.5
MS.gene26064.t1 MTR_0008s0280 36.364 99 62 1 144 241 12 110 1.48e-18 83.6
MS.gene26064.t1 MTR_3g083540 36.364 99 58 2 146 241 43 139 1.85e-18 84.7
MS.gene26064.t1 MTR_8g468380 39.130 115 69 1 127 241 4 117 2.39e-18 85.5
MS.gene26064.t1 MTR_4g097570 34.400 125 78 3 146 267 14 137 5.62e-18 83.2
MS.gene26064.t1 MTR_3g103570 39.344 122 71 3 146 265 14 134 5.68e-18 84.0
MS.gene26064.t1 MTR_1g076150 38.776 98 57 2 146 241 14 110 7.46e-18 82.0
MS.gene26064.t1 MTR_2g067420 39.175 97 58 1 146 241 16 112 9.85e-18 82.8
MS.gene26064.t1 MTR_1g017140 36.134 119 73 3 146 261 14 132 1.05e-17 83.2
MS.gene26064.t1 MTR_8g060940 38.947 95 57 1 146 239 9 103 1.20e-17 81.3
MS.gene26064.t1 MTR_1g083630 37.963 108 65 2 146 252 14 120 1.23e-17 84.0
MS.gene26064.t1 MTR_4g128190 39.623 106 51 3 146 250 13 106 1.23e-17 81.3
MS.gene26064.t1 MTR_1g100667 35.043 117 73 3 139 253 9 124 1.26e-17 81.6
MS.gene26064.t1 MTR_7g087130 40.206 97 57 1 146 241 14 110 1.38e-17 82.8
MS.gene26064.t1 MTR_0140s0030 37.500 112 66 2 146 256 15 123 1.49e-17 82.4
MS.gene26064.t1 MTR_0489s0020 37.500 112 66 2 146 256 15 123 1.49e-17 82.4
MS.gene26064.t1 MTR_4g128670 39.796 98 57 2 146 241 14 111 2.06e-17 82.4
MS.gene26064.t1 MTR_6g055910 36.449 107 65 2 146 249 16 122 2.20e-17 81.3
MS.gene26064.t1 MTR_2g033170 36.607 112 70 1 146 256 26 137 2.47e-17 81.6
MS.gene26064.t1 MTR_5g079120 30.625 160 101 2 115 264 23 182 2.55e-17 81.3
MS.gene26064.t1 MTR_4g097570 34.677 124 78 3 146 267 14 136 2.73e-17 81.3
MS.gene26064.t1 MTR_6g012180 39.175 97 58 1 146 241 14 110 2.92e-17 81.3
MS.gene26064.t1 MTR_6g012690 35.780 109 69 1 146 253 14 122 2.99e-17 82.0
MS.gene26064.t1 MTR_6g090405 38.384 99 57 2 146 241 14 111 3.60e-17 80.1
MS.gene26064.t1 MTR_2g095520 37.755 98 59 2 146 241 14 111 5.12e-17 80.9
MS.gene26064.t1 MTR_4g123040 36.607 112 70 1 146 256 26 137 5.30e-17 80.5
MS.gene26064.t1 MTR_0247s0040 37.000 100 62 1 146 244 9 108 6.23e-17 77.8
MS.gene26064.t1 MTR_5g079290 37.000 100 62 1 146 244 19 118 6.73e-17 79.7
MS.gene26064.t1 MTR_5g078910 37.000 100 62 1 146 244 9 108 7.95e-17 80.1
MS.gene26064.t1 MTR_0001s0360 37.113 97 60 1 146 241 9 105 9.16e-17 79.0
MS.gene26064.t1 MTR_1g008970 51.351 74 35 1 169 241 113 186 9.62e-17 79.0
MS.gene26064.t1 MTR_5g078950 35.000 100 64 1 146 244 9 108 1.00e-16 79.0
MS.gene26064.t1 MTR_4g057635 37.838 111 64 3 142 250 10 117 1.12e-16 79.7
MS.gene26064.t1 MTR_7g109320 43.434 99 51 2 146 241 14 110 4.24e-16 78.6
MS.gene26064.t1 MTR_7g061550 33.663 101 64 1 146 243 7 107 1.28e-15 77.0
MS.gene26064.t1 MTR_5g079220 36.000 100 63 1 146 244 23 122 1.43e-15 75.9
MS.gene26064.t1 MTR_5g078860 37.000 100 62 1 146 244 9 108 1.51e-15 76.3
MS.gene26064.t1 MTR_7g102110 30.000 130 87 3 146 273 14 141 4.16e-15 74.7
MS.gene26064.t1 MTR_5g078800 35.000 100 64 1 146 244 9 108 4.23e-15 74.3
MS.gene26064.t1 MTR_0193s0090 33.333 114 72 2 146 258 9 119 4.79e-15 73.2
MS.gene26064.t1 MTR_6g055910 41.096 73 41 1 179 249 21 93 5.94e-15 73.9
MS.gene26064.t1 MTR_7g111290 45.161 62 34 0 179 240 6 67 6.73e-15 74.7
MS.gene26064.t1 MTR_4g063100 35.366 82 51 1 172 251 5 86 7.57e-15 73.2
MS.gene26064.t1 MTR_5g078930 31.624 117 79 1 146 261 11 127 1.64e-14 72.0
MS.gene26064.t1 MTR_6g080360 36.538 104 64 2 145 247 478 580 3.15e-14 73.9
MS.gene26064.t1 MTR_6g080360 36.538 104 64 2 145 247 258 360 4.85e-14 73.6
MS.gene26064.t1 MTR_2g096380 38.667 75 44 1 172 244 14 88 1.24e-13 69.3
MS.gene26064.t1 MTR_1g085880 37.755 98 59 2 149 244 17 114 7.76e-13 66.6
MS.gene26064.t1 MTR_3g045430 29.032 124 86 2 146 268 15 137 2.16e-12 67.0
MS.gene26064.t1 MTR_1g085770 37.755 98 59 2 149 244 17 114 2.19e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26064.t1 AT4G18770 58.394 137 54 1 139 275 210 343 1.07e-50 174
MS.gene26064.t1 AT3G27785 49.718 177 81 3 104 277 150 321 2.72e-48 168
MS.gene26064.t1 AT5G40360 49.412 170 74 3 110 274 123 285 5.65e-47 162
MS.gene26064.t1 AT5G58850 52.174 138 56 2 145 272 104 241 1.98e-42 152
MS.gene26064.t1 AT5G11050 49.286 140 59 1 145 272 104 243 5.53e-41 148
MS.gene26064.t1 AT2G25230 44.667 150 78 2 126 274 6 151 1.03e-35 129
MS.gene26064.t1 AT5G40430 45.714 140 72 2 140 279 48 183 9.36e-35 127
MS.gene26064.t1 AT5G02320 53.704 108 47 1 145 252 66 170 1.59e-32 126
MS.gene26064.t1 AT5G11510 53.271 107 49 1 145 250 80 186 1.67e-32 128
MS.gene26064.t1 AT5G11510 53.271 107 49 1 145 250 80 186 1.67e-32 128
MS.gene26064.t1 AT5G11510 53.271 107 49 1 145 250 80 186 1.67e-32 128
MS.gene26064.t1 AT5G11510 53.271 107 49 1 145 250 80 186 1.78e-32 128
MS.gene26064.t1 AT5G02320 53.704 108 47 1 145 252 126 230 1.79e-32 127
MS.gene26064.t1 AT5G02320 53.704 108 47 1 145 252 126 230 1.79e-32 127
MS.gene26064.t1 AT5G11510 53.271 107 49 1 145 250 80 186 2.00e-32 127
MS.gene26064.t1 AT3G09370 54.630 108 46 1 145 252 129 233 3.47e-32 125
MS.gene26064.t1 AT3G09370 54.630 108 46 1 145 252 134 238 3.82e-32 125
MS.gene26064.t1 AT3G09370 54.630 108 46 1 145 252 142 246 5.42e-32 125
MS.gene26064.t1 AT4G32730 52.381 105 49 1 145 248 86 190 3.59e-30 121
MS.gene26064.t1 AT4G32730 52.381 105 49 1 145 248 86 190 3.59e-30 121
MS.gene26064.t1 AT4G32730 52.381 105 49 1 145 248 86 190 3.59e-30 121
MS.gene26064.t1 AT4G32730 52.381 105 49 1 145 248 86 190 3.59e-30 121
MS.gene26064.t1 AT4G32730 52.381 105 49 1 145 248 86 190 4.16e-30 121
MS.gene26064.t1 AT3G55730 47.115 104 55 0 141 244 51 154 3.38e-29 115
MS.gene26064.t1 AT3G09230 49.000 100 51 0 145 244 54 153 3.46e-28 113
MS.gene26064.t1 AT4G00540 53.000 100 44 1 146 242 103 202 5.08e-27 110
MS.gene26064.t1 AT4G00540 36.792 106 58 2 143 239 43 148 2.65e-13 70.5
MS.gene26064.t1 AT4G00540 53.000 100 44 1 146 242 101 200 1.11e-26 109
MS.gene26064.t1 AT4G00540 36.792 106 58 2 143 239 41 146 4.23e-13 70.1
MS.gene26064.t1 AT4G37260 45.536 112 58 1 145 256 12 120 1.87e-26 107
MS.gene26064.t1 AT1G26780 42.623 122 65 1 146 267 98 214 6.05e-26 104
MS.gene26064.t1 AT1G26780 42.623 122 65 1 146 267 98 214 1.19e-25 105
MS.gene26064.t1 AT3G12720 43.396 106 58 2 146 249 24 129 2.02e-25 103
MS.gene26064.t1 AT1G69560 40.833 120 66 1 146 265 107 221 3.38e-25 103
MS.gene26064.t1 AT1G69560 40.833 120 66 1 146 265 123 237 4.12e-25 103
MS.gene26064.t1 AT3G29020 45.833 96 52 0 146 241 65 160 6.08e-25 100
MS.gene26064.t1 AT5G67300 43.878 98 55 0 145 242 5 102 8.22e-25 102
MS.gene26064.t1 AT3G11440 41.284 109 62 2 146 252 43 151 8.38e-25 104
MS.gene26064.t1 AT2G39880 41.000 100 59 0 145 244 49 148 8.50e-25 103
MS.gene26064.t1 AT4G33450 42.982 114 61 1 146 259 19 128 1.12e-24 100
MS.gene26064.t1 AT3G29020 42.342 111 61 1 146 256 67 174 1.67e-24 101
MS.gene26064.t1 AT3G11440 41.284 109 62 2 146 252 43 151 2.22e-24 103
MS.gene26064.t1 AT3G11440 41.284 109 62 2 146 252 43 151 2.22e-24 103
MS.gene26064.t1 AT3G11440 41.284 109 62 2 146 252 43 151 2.22e-24 103
MS.gene26064.t1 AT3G50060 42.857 98 56 0 145 242 5 102 2.46e-24 100
MS.gene26064.t1 AT5G14750 45.361 97 52 1 146 241 18 114 5.98e-24 97.4
MS.gene26064.t1 AT2G32460 43.243 111 57 3 146 252 20 128 6.68e-24 102
MS.gene26064.t1 AT2G32460 43.243 111 57 3 146 252 8 116 6.75e-24 102
MS.gene26064.t1 AT5G17800 37.063 143 83 3 137 279 86 221 6.81e-24 100
MS.gene26064.t1 AT3G46130 40.517 116 64 2 146 260 11 122 7.14e-24 99.0
MS.gene26064.t1 AT2G23290 45.918 98 53 0 145 242 12 109 7.71e-24 99.8
MS.gene26064.t1 AT5G59780 39.655 116 65 2 146 260 10 121 7.76e-24 98.2
MS.gene26064.t1 AT1G17950 36.170 141 78 3 146 281 5 138 1.04e-23 98.2
MS.gene26064.t1 AT3G27920 46.392 97 51 1 146 241 16 112 1.46e-23 97.1
MS.gene26064.t1 AT5G55020 43.119 109 60 2 146 252 28 136 1.52e-23 101
MS.gene26064.t1 AT4G28110 42.593 108 59 2 146 250 14 121 2.27e-23 97.8
MS.gene26064.t1 AT4G05100 40.171 117 68 2 146 261 15 130 4.11e-23 98.2
MS.gene26064.t1 AT5G40330 44.330 97 53 1 146 241 14 110 4.63e-23 95.5
MS.gene26064.t1 AT4G12350 40.367 109 64 1 146 253 14 122 5.15e-23 97.1
MS.gene26064.t1 AT5G06100 30.220 182 121 4 146 324 34 212 5.40e-23 99.4
MS.gene26064.t1 AT4G22680 40.367 109 64 1 146 253 14 122 5.63e-23 96.7
MS.gene26064.t1 AT4G38620 44.340 106 54 2 142 244 10 113 5.82e-23 96.7
MS.gene26064.t1 AT4G21440 40.496 121 70 2 146 265 14 133 5.85e-23 98.2
MS.gene26064.t1 AT2G47190 37.500 136 78 2 146 280 22 151 6.79e-23 96.3
MS.gene26064.t1 AT3G53200 43.564 101 54 2 146 244 11 110 7.44e-23 95.5
MS.gene26064.t1 AT1G22640 42.727 110 61 2 142 249 10 119 7.66e-23 95.9
MS.gene26064.t1 AT5G06100 39.450 109 64 2 146 252 34 142 8.63e-23 99.4
MS.gene26064.t1 AT5G06100 39.450 109 64 2 146 252 34 142 8.63e-23 99.4
MS.gene26064.t1 AT5G06100 39.450 109 64 2 146 252 34 142 8.63e-23 99.4
MS.gene26064.t1 AT5G06100 39.450 109 64 2 146 252 34 142 8.63e-23 99.4
MS.gene26064.t1 AT4G26930 44.792 96 52 1 146 240 21 116 8.91e-23 98.2
MS.gene26064.t1 AT1G66230 40.909 110 62 2 146 253 14 122 1.11e-22 95.9
MS.gene26064.t1 AT3G28470 38.144 97 59 1 146 241 14 110 1.42e-22 96.3
MS.gene26064.t1 AT2G26950 37.097 124 69 2 131 249 3 122 2.33e-22 96.7
MS.gene26064.t1 AT3G61250 40.351 114 65 2 146 257 14 126 2.33e-22 95.5
MS.gene26064.t1 AT4G09460 44.144 111 56 3 142 248 10 118 5.70e-22 93.2
MS.gene26064.t1 AT5G26660 33.077 130 82 3 146 274 14 139 6.58e-22 95.1
MS.gene26064.t1 AT1G63910 42.268 97 55 1 146 241 14 110 9.59e-22 94.7
MS.gene26064.t1 AT3G30210 37.500 120 73 2 146 263 29 148 1.03e-21 93.2
MS.gene26064.t1 AT5G12870 38.136 118 68 2 138 250 8 125 1.38e-21 93.2
MS.gene26064.t1 AT4G34990 42.202 109 61 2 143 249 11 119 1.45e-21 92.8
MS.gene26064.t1 AT2G16720 43.243 111 57 3 143 249 11 119 1.57e-21 92.8
MS.gene26064.t1 AT3G24310 36.885 122 73 2 146 266 20 138 1.72e-21 92.4
MS.gene26064.t1 AT5G54230 38.525 122 73 2 146 266 14 134 2.09e-21 93.2
MS.gene26064.t1 AT5G10280 42.268 97 55 1 146 241 14 110 2.49e-21 93.2
MS.gene26064.t1 AT3G13890 37.736 106 62 2 146 250 14 116 2.51e-21 93.6
MS.gene26064.t1 AT4G13480 34.884 129 74 2 146 264 8 136 2.65e-21 91.7
MS.gene26064.t1 AT3G13890 36.522 115 60 2 146 250 14 125 2.65e-21 93.6
MS.gene26064.t1 AT3G01530 45.263 95 51 1 146 239 27 121 3.09e-21 90.5
MS.gene26064.t1 AT5G35550 38.298 141 82 3 146 283 16 154 3.10e-21 91.7
MS.gene26064.t1 AT1G74430 41.509 106 60 2 146 249 14 119 3.28e-21 91.7
MS.gene26064.t1 AT4G01680 36.697 109 65 2 146 253 14 119 6.27e-21 90.5
MS.gene26064.t1 AT1G68320 35.398 113 72 1 146 257 21 133 6.45e-21 91.3
MS.gene26064.t1 AT5G16770 38.760 129 61 2 146 273 14 125 6.72e-21 92.0
MS.gene26064.t1 AT5G16770 38.760 129 61 2 146 273 14 125 6.72e-21 92.0
MS.gene26064.t1 AT5G16770 38.760 129 61 2 146 273 14 125 8.34e-21 91.7
MS.gene26064.t1 AT5G16770 38.760 129 61 2 146 273 14 125 8.34e-21 91.7
MS.gene26064.t1 AT2G26960 37.795 127 75 2 122 247 1 124 8.70e-21 92.8
MS.gene26064.t1 AT3G27810 44.211 95 52 1 146 239 22 116 8.83e-21 89.7
MS.gene26064.t1 AT3G13540 29.444 180 105 5 146 305 25 202 9.28e-21 90.1
MS.gene26064.t1 AT1G48000 42.105 95 54 1 146 239 34 128 1.35e-20 89.4
MS.gene26064.t1 AT1G34670 33.588 131 85 2 146 275 14 143 1.38e-20 91.7
MS.gene26064.t1 AT3G08500 40.187 107 60 2 146 251 32 135 1.38e-20 91.3
MS.gene26064.t1 AT3G60460 41.748 103 58 2 146 246 13 115 1.39e-20 90.5
MS.gene26064.t1 AT5G60890 44.340 106 57 2 146 249 14 119 1.50e-20 90.5
MS.gene26064.t1 AT1G25340 41.489 94 51 1 146 239 20 109 1.53e-20 90.1
MS.gene26064.t1 AT4G01680 37.037 108 64 2 146 252 14 118 1.68e-20 90.9
MS.gene26064.t1 AT1G06180 32.432 185 118 5 146 326 14 195 2.09e-20 89.0
MS.gene26064.t1 AT5G65230 40.206 97 57 1 146 241 14 110 2.25e-20 90.1
MS.gene26064.t1 AT1G25340 41.489 94 51 1 146 239 20 109 2.27e-20 90.1
MS.gene26064.t1 AT1G57560 37.755 98 60 1 146 242 14 111 2.40e-20 89.4
MS.gene26064.t1 AT1G57560 39.394 99 57 2 146 242 14 111 2.59e-20 90.1
MS.gene26064.t1 AT5G40350 43.158 95 53 1 146 239 19 113 3.16e-20 87.8
MS.gene26064.t1 AT1G09540 38.318 107 62 2 146 251 14 117 3.17e-20 90.5
MS.gene26064.t1 AT2G31180 38.318 107 61 2 146 249 14 118 3.23e-20 88.6
MS.gene26064.t1 AT1G25340 42.105 95 54 1 146 239 20 114 3.98e-20 89.0
MS.gene26064.t1 AT5G16600 39.091 110 64 2 146 253 14 122 5.15e-20 89.4
MS.gene26064.t1 AT3G02940 38.532 109 66 1 146 253 14 122 5.41e-20 89.0
MS.gene26064.t1 AT5G56110 35.780 109 69 1 146 253 14 122 5.58e-20 89.4
MS.gene26064.t1 AT5G52600 40.594 101 59 1 142 241 10 110 6.42e-20 86.7
MS.gene26064.t1 AT1G73410 33.562 146 87 2 146 291 6 141 7.19e-20 86.7
MS.gene26064.t1 AT1G14350 33.884 121 80 0 149 269 28 148 7.30e-20 90.1
MS.gene26064.t1 AT1G14350 33.884 121 80 0 149 269 28 148 7.30e-20 90.1
MS.gene26064.t1 AT3G02940 38.532 109 66 1 146 253 14 122 7.98e-20 89.0
MS.gene26064.t1 AT3G02940 38.532 109 66 1 146 253 14 122 7.98e-20 89.0
MS.gene26064.t1 AT5G62320 42.727 110 54 4 146 246 15 124 8.46e-20 87.4
MS.gene26064.t1 AT2G02820 37.615 109 66 1 149 255 33 141 8.51e-20 89.0
MS.gene26064.t1 AT4G01680 34.167 120 63 2 146 252 14 130 1.11e-19 89.0
MS.gene26064.t1 AT1G73410 33.562 146 87 2 146 291 6 141 1.11e-19 87.0
MS.gene26064.t1 AT5G07690 42.157 102 58 1 146 246 14 115 1.13e-19 88.6
MS.gene26064.t1 AT2G02820 37.615 109 66 1 149 255 33 141 1.22e-19 89.7
MS.gene26064.t1 AT5G07700 43.299 97 54 1 146 241 14 110 1.22e-19 88.6
MS.gene26064.t1 AT5G07700 43.299 97 54 1 146 241 14 110 1.22e-19 88.6
MS.gene26064.t1 AT2G02820 37.615 109 66 1 149 255 33 141 1.47e-19 89.7
MS.gene26064.t1 AT5G61420 43.299 97 54 1 146 241 14 110 1.63e-19 88.6
MS.gene26064.t1 AT1G35515 38.318 107 64 2 142 246 10 116 1.80e-19 85.9
MS.gene26064.t1 AT4G17785 35.659 129 65 2 146 273 15 126 1.86e-19 88.2
MS.gene26064.t1 AT2G47460 32.867 143 77 3 146 287 14 138 2.13e-19 88.2
MS.gene26064.t1 AT5G62470 39.623 106 61 1 146 251 14 116 2.51e-19 87.8
MS.gene26064.t1 AT4G17785 35.659 129 65 2 146 273 15 126 2.58e-19 87.8
MS.gene26064.t1 AT3G23250 41.414 99 53 2 146 241 14 110 2.68e-19 86.7
MS.gene26064.t1 AT1G18570 40.741 108 61 2 146 250 15 122 2.99e-19 87.8
MS.gene26064.t1 AT5G15310 37.615 109 67 1 146 253 14 122 4.73e-19 85.5
MS.gene26064.t1 AT1G16490 38.261 115 65 3 142 252 12 124 4.92e-19 85.9
MS.gene26064.t1 AT5G15310 36.290 124 74 2 146 264 14 137 5.60e-19 86.3
MS.gene26064.t1 AT5G15310 36.290 124 74 2 146 264 14 137 5.61e-19 86.7
MS.gene26064.t1 AT1G74080 40.206 97 57 1 146 241 14 110 7.38e-19 86.3
MS.gene26064.t1 AT5G39700 38.947 95 58 0 147 241 57 151 1.07e-18 83.2
MS.gene26064.t1 AT5G52260 40.351 114 63 3 146 255 14 126 1.12e-18 84.7
MS.gene26064.t1 AT3G48920 39.474 114 65 2 146 258 20 130 1.18e-18 84.3
MS.gene26064.t1 AT5G14340 37.037 108 62 3 146 251 26 129 1.72e-18 84.3
MS.gene26064.t1 AT1G18710 38.679 106 63 2 146 249 14 119 1.77e-18 84.0
MS.gene26064.t1 AT4G37780 38.318 107 63 3 146 249 14 120 2.28e-18 84.3
MS.gene26064.t1 AT1G56160 38.776 98 57 2 146 241 16 112 2.45e-18 84.3
MS.gene26064.t1 AT3G47600 39.252 107 61 2 146 251 14 117 3.23e-18 84.3
MS.gene26064.t1 AT3G01140 36.697 109 68 1 146 253 57 165 6.46e-18 84.0
MS.gene26064.t1 AT5G62470 39.252 107 61 2 146 251 14 117 6.79e-18 83.6
MS.gene26064.t1 AT3G01140 36.697 109 68 1 146 253 14 122 7.65e-18 83.6
MS.gene26064.t1 AT5G49330 38.384 99 56 2 146 241 14 110 7.66e-18 83.6
MS.gene26064.t1 AT5G14750 47.619 63 33 0 179 241 18 80 8.18e-18 80.1
MS.gene26064.t1 AT1G56650 35.664 143 82 4 146 278 10 152 1.02e-17 81.6
MS.gene26064.t1 AT1G79180 36.893 103 60 2 142 241 12 112 1.03e-17 82.4
MS.gene26064.t1 AT5G23000 39.048 105 62 2 142 244 10 114 1.03e-17 82.8
MS.gene26064.t1 AT1G74650 38.938 113 65 2 146 257 14 123 1.04e-17 82.8
MS.gene26064.t1 AT5G57620 37.069 116 70 3 146 258 14 129 1.23e-17 82.8
MS.gene26064.t1 AT5G49620 35.938 128 78 2 133 256 12 139 1.42e-17 82.4
MS.gene26064.t1 AT5G26660 35.417 96 58 2 179 274 17 108 1.68e-17 82.4
MS.gene26064.t1 AT1G08810 36.842 114 71 1 146 258 14 127 1.91e-17 81.6
MS.gene26064.t1 AT1G66370 36.607 112 64 2 146 250 10 121 2.18e-17 80.5
MS.gene26064.t1 AT5G65790 37.838 111 66 3 146 253 14 124 2.23e-17 82.4
MS.gene26064.t1 AT3G62610 38.144 97 59 1 146 241 14 110 3.44e-17 81.6
MS.gene26064.t1 AT3G18100 39.583 96 58 0 144 239 544 639 4.80e-17 82.4
MS.gene26064.t1 AT3G18100 41.667 96 54 2 145 239 494 588 3.58e-15 77.0
MS.gene26064.t1 AT3G18100 39.583 96 58 0 144 239 496 591 5.45e-17 82.4
MS.gene26064.t1 AT3G18100 41.667 96 54 2 145 239 446 540 4.13e-15 76.6
MS.gene26064.t1 AT3G18100 39.583 96 58 0 144 239 383 478 5.90e-17 82.0
MS.gene26064.t1 AT3G18100 41.667 96 54 2 145 239 333 427 4.65e-15 76.3
MS.gene26064.t1 AT3G18100 39.583 96 58 0 144 239 331 426 7.00e-17 82.0
MS.gene26064.t1 AT3G18100 41.667 96 54 2 145 239 281 375 5.32e-15 76.3
MS.gene26064.t1 AT5G35550 45.570 79 41 1 179 255 53 131 9.06e-17 79.3
MS.gene26064.t1 AT3G49690 37.838 111 66 3 146 253 14 124 9.31e-17 80.1
MS.gene26064.t1 AT3G28910 39.583 96 57 1 146 240 14 109 9.58e-17 80.1
MS.gene26064.t1 AT3G06490 32.824 131 86 2 127 256 3 132 1.46e-16 79.7
MS.gene26064.t1 AT1G66380 41.667 96 55 1 146 240 10 105 1.89e-16 75.5
MS.gene26064.t1 AT4G25560 37.383 107 64 2 146 249 12 118 1.95e-16 78.6
MS.gene26064.t1 AT3G53200 46.970 66 35 0 179 244 12 77 4.54e-16 76.3
MS.gene26064.t1 AT3G12820 36.082 97 61 1 146 241 16 112 5.25e-16 76.6
MS.gene26064.t1 AT2G37630 33.043 115 71 2 146 257 4 115 1.09e-15 77.4
MS.gene26064.t1 AT3G27810 49.180 61 31 0 179 239 7 67 1.71e-15 73.9
MS.gene26064.t1 AT2G36890 37.037 108 65 3 146 250 14 121 2.51e-15 75.9
MS.gene26064.t1 AT2G36890 37.037 108 65 3 146 250 55 162 3.77e-15 75.5
MS.gene26064.t1 AT5G59780 39.024 82 46 1 179 260 23 100 7.93e-15 72.8
MS.gene26064.t1 AT3G46130 39.024 82 46 1 179 260 23 100 1.07e-14 72.8
MS.gene26064.t1 AT5G40350 47.541 61 32 0 179 239 8 68 1.07e-14 71.2
MS.gene26064.t1 AT3G46130 39.024 82 46 1 179 260 13 90 1.26e-14 72.4
MS.gene26064.t1 AT1G66390 40.206 97 57 1 146 241 10 106 2.69e-14 72.0
MS.gene26064.t1 AT5G49620 32.394 142 78 3 133 256 12 153 2.79e-14 72.8
MS.gene26064.t1 AT1G79180 29.851 134 60 3 142 241 12 145 3.06e-14 72.8
MS.gene26064.t1 AT3G47600 36.082 97 59 1 155 251 18 111 5.66e-14 72.0
MS.gene26064.t1 AT3G12820 44.444 63 35 0 179 241 2 64 7.49e-14 69.7
MS.gene26064.t1 AT1G22640 50.820 61 29 1 190 249 2 62 1.15e-13 69.3
MS.gene26064.t1 AT5G14750 43.478 69 38 1 190 257 2 70 1.35e-13 67.8
MS.gene26064.t1 AT5G14750 43.478 69 38 1 190 257 2 70 1.35e-13 67.8
MS.gene26064.t1 AT1G66380 47.458 59 31 0 182 240 14 72 1.21e-11 61.2
MS.gene26064.t1 AT1G14350 33.735 83 55 0 187 269 23 105 5.64e-11 63.5
MS.gene26064.t1 AT1G14350 33.735 83 55 0 187 269 23 105 5.64e-11 63.5

Find 83 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCTTCAAAACTATATT+AGG 0.144743 7.4:+54273070 MS.gene26064:CDS
TAAACACTGACAAAGGATTT+TGG 0.185679 7.4:+54271547 MS.gene26064:CDS
ACCATCTTCAACCAAATATT+AGG 0.197577 7.4:+54272136 MS.gene26064:CDS
GTCCAGTTCGTGAGTTTGTT+AGG 0.259199 7.4:+54272039 MS.gene26064:CDS
GAGAGAGAGACCCTAATATT+TGG 0.260215 7.4:-54272147 None:intergenic
GTCATATATTGCTGAATTCT+TGG 0.271338 7.4:+54272074 MS.gene26064:CDS
GGAGCTTAAACATCATTTCT+TGG 0.304090 7.4:-54271623 None:intergenic
CAATGAAATAAAGATGTTCT+TGG 0.313640 7.4:-54271644 None:intergenic
AAAATCCTTTGTCAGTGTTT+AGG 0.328248 7.4:-54271545 None:intergenic
GAAAAGGAAATGATGGATAA+TGG 0.333050 7.4:+54273117 MS.gene26064:CDS
GAAACCAGATATTCGTACTA+TGG 0.339568 7.4:+54271353 MS.gene26064:CDS
AACATCATTTCTTGGATTTG+AGG 0.356591 7.4:-54271615 None:intergenic
TAGATTGAAGGGAATTGATT+TGG 0.358824 7.4:-54271578 None:intergenic
GAAACCATAGTACGAATATC+TGG 0.365943 7.4:-54271357 None:intergenic
ATTGCTTCAAAACTATATTA+GGG 0.367936 7.4:+54273071 MS.gene26064:CDS
CCATCTTCAACCAAATATTA+GGG 0.392145 7.4:+54272137 MS.gene26064:CDS
ATTGATGCTCATAAAGAAGT+TGG 0.392391 7.4:+54272910 MS.gene26064:CDS
ATGACTTCAACTATGAAGAT+TGG 0.400351 7.4:+54273157 MS.gene26064:CDS
AGCATTCCAATGATTCTTGA+TGG 0.402407 7.4:-54272983 None:intergenic
GACATAATGGATTGTGAGGT+TGG 0.402522 7.4:+54273240 MS.gene26064:CDS
AGAATTCCATCAAGAATCAT+TGG 0.409549 7.4:+54272977 MS.gene26064:CDS
CTGAAGGTTTACTAGATTGA+AGG 0.409840 7.4:-54271590 None:intergenic
AAAAGGAAATGATGGATAAT+GGG 0.418778 7.4:+54273118 MS.gene26064:CDS
CCCTAATATTTGGTTGAAGA+TGG 0.419887 7.4:-54272137 None:intergenic
TCCAGTTCGTGAGTTTGTTA+GGG 0.424912 7.4:+54272040 MS.gene26064:CDS
GCCCTAACAAACTCACGAAC+TGG 0.432105 7.4:-54272041 None:intergenic
GTAGGTTTGAATGCAGGGCT+TGG 0.436775 7.4:-54271462 None:intergenic
AAAACCTTCTGCGGACTCAT+TGG 0.439145 7.4:-54271490 None:intergenic
CTCATACAATCAAAGGCAAA+TGG 0.440530 7.4:+54271775 MS.gene26064:CDS
GAATTCTTGGATGGAAAGAC+TGG 0.443900 7.4:+54272087 MS.gene26064:CDS
TAGGTTTGAATGCAGGGCTT+GGG 0.447471 7.4:-54271461 None:intergenic
GCATCCTCCTCTTCATTCCA+TGG 0.456852 7.4:-54272880 None:intergenic
GAAATTTCAAAGAGATTGCC+TGG 0.458029 7.4:+54272946 MS.gene26064:CDS
TTTGATTGTATGAGTAACTT+TGG 0.461263 7.4:-54271766 None:intergenic
GATGTTGGTGGCTATATTGA+TGG 0.461323 7.4:+54273195 MS.gene26064:CDS
TGACTTCAACTATGAAGATT+GGG 0.476506 7.4:+54273158 MS.gene26064:CDS
GTGTGTGTAGGTTTGAATGC+AGG 0.477954 7.4:-54271468 None:intergenic
GAGTCTTTGATCAGCATCCA+TGG 0.488892 7.4:-54271685 None:intergenic
TCTTGGATTTGAGGTTCTGA+AGG 0.490355 7.4:-54271606 None:intergenic
CCAAGATGAAATTAGAAAAG+AGG 0.491474 7.4:+54273025 MS.gene26064:CDS
TTGATGCTCATAAAGAAGTT+GGG 0.493054 7.4:+54272911 MS.gene26064:CDS
TATATTGCTGAATTCTTGGA+TGG 0.498048 7.4:+54272078 MS.gene26064:CDS
GGAAACAGTGTTGGGAGAGA+TGG 0.503752 7.4:+54272109 MS.gene26064:CDS
ATAAAGAAGTTGGGAACAAG+TGG 0.509921 7.4:+54272920 MS.gene26064:CDS
GCAATAGATCATTCCTCCAC+TGG 0.517180 7.4:+54271423 MS.gene26064:CDS
ATTAAATACAGAAGGGGCCA+TGG 0.521002 7.4:+54272863 MS.gene26064:intron
GAAAGACTGGGAAACAGTGT+TGG 0.523695 7.4:+54272100 MS.gene26064:CDS
TGTGTGTAGGTTTGAATGCA+GGG 0.526772 7.4:-54271467 None:intergenic
TGAAGGTTTACTAGATTGAA+GGG 0.528897 7.4:-54271589 None:intergenic
ATCATTGGAATGCTACTAAG+AGG 0.529236 7.4:+54272992 MS.gene26064:CDS
TGATGGTTAGCATCATTAAG+AGG 0.531273 7.4:-54271387 None:intergenic
GTTATTAACAAAACCTTCTG+CGG 0.531511 7.4:-54271499 None:intergenic
AGATTGTGAAAAGGAAATGA+TGG 0.531718 7.4:+54273110 MS.gene26064:CDS
AACAAAATGGAAGCCGTGCA+TGG 0.535185 7.4:+54271519 MS.gene26064:CDS
AATGGACTGCAGATGAGGAC+AGG 0.545420 7.4:+54271793 MS.gene26064:CDS
AGGGCTTGGGATCATAAGAA+AGG 0.546742 7.4:-54271448 None:intergenic
AATTGCTCAAGATTGTGAAA+AGG 0.546787 7.4:+54273101 MS.gene26064:CDS
AAAGTTACTCATACAATCAA+AGG 0.548539 7.4:+54271768 MS.gene26064:CDS
TTGCAGCCAAAACAAAATGA+TGG 0.549491 7.4:-54271404 None:intergenic
AAAGACTGGGAAACAGTGTT+GGG 0.552335 7.4:+54272101 MS.gene26064:CDS
GTTTGTTAGGGCTTAAACAA+TGG 0.552444 7.4:+54272052 MS.gene26064:CDS
AGTCTTTGATCAGCATCCAT+GGG 0.552934 7.4:-54271684 None:intergenic
AGTGTTTAGGTAGCCATGCA+CGG 0.563294 7.4:-54271532 None:intergenic
GCGGACTCATTGGTGTGTGT+AGG 0.564328 7.4:-54271480 None:intergenic
ATGGAATTCTCAGTACGTCC+AGG 0.572465 7.4:-54272964 None:intergenic
AGGCAAATGGACTGCAGATG+AGG 0.572483 7.4:+54271788 MS.gene26064:CDS
GGGCTTGGGATCATAAGAAA+GGG 0.573394 7.4:-54271447 None:intergenic
AATGATGGATAATGGGAATG+AGG 0.596781 7.4:+54273125 MS.gene26064:CDS
CATAAGAAAGGGACCAGTGG+AGG 0.605059 7.4:-54271436 None:intergenic
TGAAGATTGGGCAACTCAAG+AGG 0.606538 7.4:+54273170 MS.gene26064:CDS
ACTCAAGAGGATGATGTTGG+TGG 0.613174 7.4:+54273183 MS.gene26064:CDS
GGCTACCTAAACACTGACAA+AGG 0.631206 7.4:+54271540 MS.gene26064:CDS
CACACCAATGAGTCCGCAGA+AGG 0.636636 7.4:+54271486 MS.gene26064:CDS
GAAGGGGCCATGGAATGAAG+AGG 0.636638 7.4:+54272873 MS.gene26064:intron
GGGGCCATGGAATGAAGAGG+AGG 0.644373 7.4:+54272876 MS.gene26064:CDS
AATTCTTGGATGGAAAGACT+GGG 0.644480 7.4:+54272088 MS.gene26064:CDS
TAAAGAAGTTGGGAACAAGT+GGG 0.650172 7.4:+54272921 MS.gene26064:CDS
TAGAACTGAAAACAACCCCA+TGG 0.657754 7.4:+54271668 MS.gene26064:CDS
GCAACTCAAGAGGATGATGT+TGG 0.663745 7.4:+54273180 MS.gene26064:CDS
TGGTTAGCATCATTAAGAGG+TGG 0.664839 7.4:-54271384 None:intergenic
GTCTTTGATCAGCATCCATG+GGG 0.665839 7.4:-54271683 None:intergenic
ATATGACATAATGGATTGTG+AGG 0.688731 7.4:+54273236 MS.gene26064:CDS
GATCATAAGAAAGGGACCAG+TGG 0.690979 7.4:-54271439 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAATTGATATAATT+TGG - chr7.4:54272324-54272343 None:intergenic 10.0%
!! TTATGTAAATATCAATTTAG+TGG - chr7.4:54272458-54272477 None:intergenic 15.0%
!!! ATCTCTTTTTAAATACTTAA+TGG + chr7.4:54271873-54271892 MS.gene26064:intron 15.0%
!!! GTTTCATAAGATATATATTT+TGG - chr7.4:54272576-54272595 None:intergenic 15.0%
!!! TATTCATTTTATTCTAATGT+TGG + chr7.4:54271932-54271951 MS.gene26064:intron 15.0%
!! AAAAAATCATGAAATCATTG+TGG - chr7.4:54271851-54271870 None:intergenic 20.0%
!! AAAAATCATGAAATCATTGT+GGG - chr7.4:54271850-54271869 None:intergenic 20.0%
!! AATTGCTTCAAAACTATATT+AGG + chr7.4:54273070-54273089 MS.gene26064:CDS 20.0%
!! ATAACAACATAAAAATGAGA+AGG - chr7.4:54272269-54272288 None:intergenic 20.0%
!! ATGTACAAAAAATTGAATAG+AGG - chr7.4:54272830-54272849 None:intergenic 20.0%
!! ATTGCTTCAAAACTATATTA+GGG + chr7.4:54273071-54273090 MS.gene26064:CDS 20.0%
!!! AGGTTTTGTTAATAACAAAA+TGG + chr7.4:54271506-54271525 MS.gene26064:CDS 20.0%
! AAAGTTACTCATACAATCAA+AGG + chr7.4:54271768-54271787 MS.gene26064:CDS 25.0%
! CAATGAAATAAAGATGTTCT+TGG - chr7.4:54271647-54271666 None:intergenic 25.0%
! GAAAAATGGATATGACATAA+TGG + chr7.4:54273227-54273246 MS.gene26064:CDS 25.0%
! GATGGAAATGAAATGAAAAA+TGG + chr7.4:54273213-54273232 MS.gene26064:CDS 25.0%
! TTTGATTGTATGAGTAACTT+TGG - chr7.4:54271769-54271788 None:intergenic 25.0%
!!! AAAAGGAAATGATGGATAAT+GGG + chr7.4:54273118-54273137 MS.gene26064:CDS 25.0%
!!! ATATATATTTTGGCACAAGT+AGG - chr7.4:54272566-54272585 None:intergenic 25.0%
!!! TATATATTTTGGCACAAGTA+GGG - chr7.4:54272565-54272584 None:intergenic 25.0%
!!! TTTTGAAGCAATTTTCTTCT+TGG - chr7.4:54273063-54273082 None:intergenic 25.0%
AAAATCCTTTGTCAGTGTTT+AGG - chr7.4:54271548-54271567 None:intergenic 30.0%
AACATCATTTCTTGGATTTG+AGG - chr7.4:54271618-54271637 None:intergenic 30.0%
AATTGCTCAAGATTGTGAAA+AGG + chr7.4:54273101-54273120 MS.gene26064:CDS 30.0%
ACCATCTTCAACCAAATATT+AGG + chr7.4:54272136-54272155 MS.gene26064:CDS 30.0%
AGAATTCCATCAAGAATCAT+TGG + chr7.4:54272977-54272996 MS.gene26064:CDS 30.0%
AGATTGTGAAAAGGAAATGA+TGG + chr7.4:54273110-54273129 MS.gene26064:CDS 30.0%
ATCCACACATTAAATACAGA+AGG + chr7.4:54272855-54272874 MS.gene26064:intron 30.0%
ATGACTTCAACTATGAAGAT+TGG + chr7.4:54273157-54273176 MS.gene26064:CDS 30.0%
ATTGATGCTCATAAAGAAGT+TGG + chr7.4:54272910-54272929 MS.gene26064:CDS 30.0%
CCAAGATGAAATTAGAAAAG+AGG + chr7.4:54273025-54273044 MS.gene26064:CDS 30.0%
CCATCTTCAACCAAATATTA+GGG + chr7.4:54272137-54272156 MS.gene26064:CDS 30.0%
GTCATATATTGCTGAATTCT+TGG + chr7.4:54272074-54272093 MS.gene26064:CDS 30.0%
GTTATTAACAAAACCTTCTG+CGG - chr7.4:54271502-54271521 None:intergenic 30.0%
TAGATTGAAGGGAATTGATT+TGG - chr7.4:54271581-54271600 None:intergenic 30.0%
TATATTGCTGAATTCTTGGA+TGG + chr7.4:54272078-54272097 MS.gene26064:CDS 30.0%
TCCACACATTAAATACAGAA+GGG + chr7.4:54272856-54272875 MS.gene26064:intron 30.0%
TGAAGGTTTACTAGATTGAA+GGG - chr7.4:54271592-54271611 None:intergenic 30.0%
TGACTTCAACTATGAAGATT+GGG + chr7.4:54273158-54273177 MS.gene26064:CDS 30.0%
TTGATGCTCATAAAGAAGTT+GGG + chr7.4:54272911-54272930 MS.gene26064:CDS 30.0%
! CCTCTTTTCTAATTTCATCT+TGG - chr7.4:54273028-54273047 None:intergenic 30.0%
! TAAACACTGACAAAGGATTT+TGG + chr7.4:54271547-54271566 MS.gene26064:CDS 30.0%
! TTACTTGATCACTCTTTTGT+TGG - chr7.4:54271728-54271747 None:intergenic 30.0%
!! ATATGACATAATGGATTGTG+AGG + chr7.4:54273236-54273255 MS.gene26064:CDS 30.0%
!! GAAAAGGAAATGATGGATAA+TGG + chr7.4:54273117-54273136 MS.gene26064:CDS 30.0%
!! TGCTAACCATCATTTTGTTT+TGG + chr7.4:54271398-54271417 MS.gene26064:CDS 30.0%
AATTCTTGGATGGAAAGACT+GGG + chr7.4:54272088-54272107 MS.gene26064:CDS 35.0%
AGCATTCCAATGATTCTTGA+TGG - chr7.4:54272986-54273005 None:intergenic 35.0%
ATAAAGAAGTTGGGAACAAG+TGG + chr7.4:54272920-54272939 MS.gene26064:CDS 35.0%
ATCATTGGAATGCTACTAAG+AGG + chr7.4:54272992-54273011 MS.gene26064:CDS 35.0%
CCACACATTAAATACAGAAG+GGG + chr7.4:54272857-54272876 MS.gene26064:intron 35.0%
CCCTAATATTTGGTTGAAGA+TGG - chr7.4:54272140-54272159 None:intergenic 35.0%
CTCATACAATCAAAGGCAAA+TGG + chr7.4:54271775-54271794 MS.gene26064:CDS 35.0%
CTGAAGGTTTACTAGATTGA+AGG - chr7.4:54271593-54271612 None:intergenic 35.0%
GAAACCAGATATTCGTACTA+TGG + chr7.4:54271353-54271372 MS.gene26064:CDS 35.0%
GAAACCATAGTACGAATATC+TGG - chr7.4:54271360-54271379 None:intergenic 35.0%
GAAATTTCAAAGAGATTGCC+TGG + chr7.4:54272946-54272965 MS.gene26064:CDS 35.0%
GGAGCTTAAACATCATTTCT+TGG - chr7.4:54271626-54271645 None:intergenic 35.0%
TAAAGAAGTTGGGAACAAGT+GGG + chr7.4:54272921-54272940 MS.gene26064:CDS 35.0%
TGATGGTTAGCATCATTAAG+AGG - chr7.4:54271390-54271409 None:intergenic 35.0%
TTGCAGCCAAAACAAAATGA+TGG - chr7.4:54271407-54271426 None:intergenic 35.0%
! GGTCAATGCAACATATTTTG+AGG - chr7.4:54272544-54272563 None:intergenic 35.0%
! GTTTGTTAGGGCTTAAACAA+TGG + chr7.4:54272052-54272071 MS.gene26064:CDS 35.0%
!! AATGATGGATAATGGGAATG+AGG + chr7.4:54273125-54273144 MS.gene26064:CDS 35.0%
!!! GCAACATATTTTGAGGTGTA+AGG - chr7.4:54272537-54272556 None:intergenic 35.0%
AAAGACTGGGAAACAGTGTT+GGG + chr7.4:54272101-54272120 MS.gene26064:CDS 40.0%
AGTCTTTGATCAGCATCCAT+GGG - chr7.4:54271687-54271706 None:intergenic 40.0%
ATTAAATACAGAAGGGGCCA+TGG + chr7.4:54272863-54272882 MS.gene26064:intron 40.0%
CCCCTTCTGTATTTAATGTG+TGG - chr7.4:54272860-54272879 None:intergenic 40.0%
GAATTCTTGGATGGAAAGAC+TGG + chr7.4:54272087-54272106 MS.gene26064:CDS 40.0%
GAGAGAGAGACCCTAATATT+TGG - chr7.4:54272150-54272169 None:intergenic 40.0%
TAGAACTGAAAACAACCCCA+TGG + chr7.4:54271668-54271687 MS.gene26064:CDS 40.0%
TGGTTAGCATCATTAAGAGG+TGG - chr7.4:54271387-54271406 None:intergenic 40.0%
TGTGTGTAGGTTTGAATGCA+GGG - chr7.4:54271470-54271489 None:intergenic 40.0%
! TCTTGGATTTGAGGTTCTGA+AGG - chr7.4:54271609-54271628 None:intergenic 40.0%
!! GACATAATGGATTGTGAGGT+TGG + chr7.4:54273240-54273259 MS.gene26064:CDS 40.0%
!! GATGTTGGTGGCTATATTGA+TGG + chr7.4:54273195-54273214 MS.gene26064:CDS 40.0%
!! TCCAGTTCGTGAGTTTGTTA+GGG + chr7.4:54272040-54272059 MS.gene26064:CDS 40.0%
AAAACCTTCTGCGGACTCAT+TGG - chr7.4:54271493-54271512 None:intergenic 45.0%
AACAAAATGGAAGCCGTGCA+TGG + chr7.4:54271519-54271538 MS.gene26064:CDS 45.0%
ACTCAAGAGGATGATGTTGG+TGG + chr7.4:54273183-54273202 MS.gene26064:CDS 45.0%
AGGGCTTGGGATCATAAGAA+AGG - chr7.4:54271451-54271470 None:intergenic 45.0%
AGTGTTTAGGTAGCCATGCA+CGG - chr7.4:54271535-54271554 None:intergenic 45.0%
ATGGAATTCTCAGTACGTCC+AGG - chr7.4:54272967-54272986 None:intergenic 45.0%
GAAAGACTGGGAAACAGTGT+TGG + chr7.4:54272100-54272119 MS.gene26064:CDS 45.0%
GAGTCTTTGATCAGCATCCA+TGG - chr7.4:54271688-54271707 None:intergenic 45.0%
GATCATAAGAAAGGGACCAG+TGG - chr7.4:54271442-54271461 None:intergenic 45.0%
GCAACTCAAGAGGATGATGT+TGG + chr7.4:54273180-54273199 MS.gene26064:CDS 45.0%
GCAATAGATCATTCCTCCAC+TGG + chr7.4:54271423-54271442 MS.gene26064:CDS 45.0%
GGCTACCTAAACACTGACAA+AGG + chr7.4:54271540-54271559 MS.gene26064:CDS 45.0%
GGGCTTGGGATCATAAGAAA+GGG - chr7.4:54271450-54271469 None:intergenic 45.0%
GTCTTTGATCAGCATCCATG+GGG - chr7.4:54271686-54271705 None:intergenic 45.0%
GTGTGTGTAGGTTTGAATGC+AGG - chr7.4:54271471-54271490 None:intergenic 45.0%
TAGGTTTGAATGCAGGGCTT+GGG - chr7.4:54271464-54271483 None:intergenic 45.0%
TGAAGATTGGGCAACTCAAG+AGG + chr7.4:54273170-54273189 MS.gene26064:CDS 45.0%
! GTCCAGTTCGTGAGTTTGTT+AGG + chr7.4:54272039-54272058 MS.gene26064:CDS 45.0%
CATAAGAAAGGGACCAGTGG+AGG - chr7.4:54271439-54271458 None:intergenic 50.0%
GCATCCTCCTCTTCATTCCA+TGG - chr7.4:54272883-54272902 None:intergenic 50.0%
GCCCTAACAAACTCACGAAC+TGG - chr7.4:54272044-54272063 None:intergenic 50.0%
GTAGGTTTGAATGCAGGGCT+TGG - chr7.4:54271465-54271484 None:intergenic 50.0%
! GGAAACAGTGTTGGGAGAGA+TGG + chr7.4:54272109-54272128 MS.gene26064:CDS 50.0%
!! AATGGACTGCAGATGAGGAC+AGG + chr7.4:54271793-54271812 MS.gene26064:CDS 50.0%
!! AGGCAAATGGACTGCAGATG+AGG + chr7.4:54271788-54271807 MS.gene26064:CDS 50.0%
CACACCAATGAGTCCGCAGA+AGG + chr7.4:54271486-54271505 MS.gene26064:CDS 55.0%
GAAGGGGCCATGGAATGAAG+AGG + chr7.4:54272873-54272892 MS.gene26064:intron 55.0%
GCGGACTCATTGGTGTGTGT+AGG - chr7.4:54271483-54271502 None:intergenic 55.0%
GGGGCCATGGAATGAAGAGG+AGG + chr7.4:54272876-54272895 MS.gene26064:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 54271351 54273269 54271351 ID=MS.gene26064
chr7.4 mRNA 54271351 54273269 54271351 ID=MS.gene26064.t1;Parent=MS.gene26064
chr7.4 exon 54271351 54271814 54271351 ID=MS.gene26064.t1.exon1;Parent=MS.gene26064.t1
chr7.4 CDS 54271351 54271814 54271351 ID=cds.MS.gene26064.t1;Parent=MS.gene26064.t1
chr7.4 exon 54272032 54272158 54272032 ID=MS.gene26064.t1.exon2;Parent=MS.gene26064.t1
chr7.4 CDS 54272032 54272158 54272032 ID=cds.MS.gene26064.t1;Parent=MS.gene26064.t1
chr7.4 exon 54272874 54273269 54272874 ID=MS.gene26064.t1.exon3;Parent=MS.gene26064.t1
chr7.4 CDS 54272874 54273269 54272874 ID=cds.MS.gene26064.t1;Parent=MS.gene26064.t1
Gene Sequence

>MS.gene26064

ATGAAACCAGATATTCGTACTATGGTTTCTTTTCCACCTCTTAATGATGCTAACCATCATTTTGTTTTGGCTGCAATAGATCATTCCTCCACTGGTCCCTTTCTTATGATCCCAAGCCCTGCATTCAAACCTACACACACCAATGAGTCCGCAGAAGGTTTTGTTAATAACAAAATGGAAGCCGTGCATGGCTACCTAAACACTGACAAAGGATTTTGGAATTTCTACCAAATCAATTCCCTTCAATCTAGTAAACCTTCAGAACCTCAAATCCAAGAAATGATGTTTAAGCTCCAAGAACATCTTTATTTCATTGATAGAACTGAAAACAACCCCATGGATGCTGATCAAAGACTCGTTCTTGTTGACAAGAACCAACAAAAGAGTGATCAAGTAAAGAATAATGAAATTTTGACCAAAGTTACTCATACAATCAAAGGCAAATGGACTGCAGATGAGGACAGGTATAAAAATCATTCAAAATCTTGTATTCTCTCCCACAATGATTTCATGATTTTTTGCATCTCTTTTTAAATACTTAATGGTTATAAAAAATGTTTATTGAATTTTTTTGTTAATTTTATTCATTTTATTCTAATGTTGGTTTATAATTGTTTTGTTCAACTTGTTATCAATAGTTGACAAATGAAAAATAACTAATTGTATTTTATCATTTTGTAGCATTCTTGTCCAGTTCGTGAGTTTGTTAGGGCTTAAACAATGGTCATATATTGCTGAATTCTTGGATGGAAAGACTGGGAAACAGTGTTGGGAGAGATGGACTAACCATCTTCAACCAAATATTAGGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGCTTTCGTCCTTCTCATTTTTATGTTGTTATATTTTAGTCTTTCTCTTTTACGCACATATATACCAAATTATATCAATTTTCAAAAAAGTATATTCGTAATTTTTTATATTTTAACATCAAGTGTCATATATTTATTCAATAAATATTTTATACATTATTTTATAATAAAAAATGTAATTTATTGTAAAGAAATTTTCCACTAAATTGATATTTACATAAATTTTTGTGAAAAGTTAAATATATCTTAAACATTAAAGTTCTCAAATCATTGATTGCCTTACACCTCAAAATATGTTGCATTGACCCTACTTGTGCCAAAATATATATCTTATGAAACATAAGTTCTTCATATGTAAGTCTCATTAATTATTTTTGTTCAAAATCTTTTGTCACTGAAACACTTTTCATGAAATAACTATGTGATTCTTTTAATTACATGTGCAATATAAATTGTCTCGTTTAATTTCATATAGCATGTCTTGTTAGATAAGTCATACAAATATTACACAAAAAGACATGTTGATTACTTTAAAATCTTTCTTTAACAAATTGAAGAGATGATAATTTTCCTCTATTCAATTTTTTGTACATCTAATATCCACACATTAAATACAGAAGGGGCCATGGAATGAAGAGGAGGATGCAATTCTAATTGATGCTCATAAAGAAGTTGGGAACAAGTGGGCAGAAATTTCAAAGAGATTGCCTGGACGTACTGAGAATTCCATCAAGAATCATTGGAATGCTACTAAGAGGAGTCTGAAATCCAAGATGAAATTAGAAAAGAGGAGCAACACTAGTCCAAGAAGAAAATTGCTTCAAAACTATATTAGGGAAGTCACAATTGCTCAAGATTGTGAAAAGGAAATGATGGATAATGGGAATGAGGATGACAACAATGACTTCAACTATGAAGATTGGGCAACTCAAGAGGATGATGTTGGTGGCTATATTGATGGAAATGAAATGAAAAATGGATATGACATAATGGATTGTGAGGTTGGAATCTAG
Protein sequence

>MS.gene26064.t1

MKPDIRTMVSFPPLNDANHHFVLAAIDHSSTGPFLMIPSPAFKPTHTNESAEGFVNNKMEAVHGYLNTDKGFWNFYQINSLQSSKPSEPQIQEMMFKLQEHLYFIDRTENNPMDADQRLVLVDKNQQKSDQVKNNEILTKVTHTIKGKWTADEDSILVQFVSLLGLKQWSYIAEFLDGKTGKQCWERWTNHLQPNIRKGPWNEEEDAILIDAHKEVGNKWAEISKRLPGRTENSIKNHWNATKRSLKSKMKLEKRSNTSPRRKLLQNYIREVTIAQDCEKEMMDNGNEDDNNDFNYEDWATQEDDVGGYIDGNEMKNGYDIMDCEVGI