Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26192.t1 | XP_003616150.2 | 94.7 | 488 | 26 | 0 | 1 | 488 | 1 | 488 | 1.50E-271 | 944.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26192.t1 | Q6NQJ8 | 56.4 | 491 | 201 | 6 | 1 | 487 | 1 | 482 | 1.3e-154 | 547.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26192.t1 | G7KFS1 | 94.7 | 488 | 26 | 0 | 1 | 488 | 1 | 488 | 1.1e-271 | 944.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26192.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26192.t1 | MTR_5g076640 | 94.672 | 488 | 26 | 0 | 1 | 488 | 1 | 488 | 0.0 | 946 |
| MS.gene26192.t1 | MTR_1g077040 | 26.316 | 285 | 178 | 10 | 52 | 315 | 33 | 306 | 2.29e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26192.t1 | AT5G17240 | 56.415 | 491 | 201 | 6 | 1 | 487 | 1 | 482 | 0.0 | 559 |
| MS.gene26192.t1 | AT5G17240 | 56.731 | 416 | 171 | 5 | 76 | 487 | 1 | 411 | 2.88e-167 | 479 |
Find 96 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTCATTAAAGCAGATTT+TGG | 0.219025 | 5.4:+57781765 | None:intergenic |
| GTCGGACATCTTGCATATTC+TGG | 0.229958 | 5.4:-57778497 | MS.gene26192:CDS |
| AACATTTAAGGCTTGGGTTT+GGG | 0.237108 | 5.4:-57779536 | MS.gene26192:CDS |
| TTGTTAAACTTATGTCATTC+AGG | 0.257944 | 5.4:-57778319 | MS.gene26192:CDS |
| TTCTTCTCTCTCCTCTGTTC+AGG | 0.263063 | 5.4:-57781691 | MS.gene26192:intron |
| CTATGGAACATACACAAATT+TGG | 0.272520 | 5.4:-57778714 | MS.gene26192:CDS |
| AGCTTCTTTCCATTCTGATT+TGG | 0.281371 | 5.4:+57779600 | None:intergenic |
| GACTAGTGAGAGTGTTATTA+TGG | 0.303299 | 5.4:-57781748 | MS.gene26192:CDS |
| CAACACTCTCTTTCCTCTCT+TGG | 0.303355 | 5.4:-57782057 | MS.gene26192:CDS |
| CACTTCTACTTCATGGTCTA+AGG | 0.325752 | 5.4:-57778612 | MS.gene26192:CDS |
| TAACATTTAAGGCTTGGGTT+TGG | 0.329689 | 5.4:-57779537 | MS.gene26192:CDS |
| CATGACTATAATTTCATTGT+TGG | 0.340261 | 5.4:+57778460 | None:intergenic |
| TTGGAGCTTCTTGAACACTA+TGG | 0.346357 | 5.4:-57778695 | MS.gene26192:CDS |
| GGGCAACCCCTCATAATAAA+AGG | 0.361144 | 5.4:-57778526 | MS.gene26192:CDS |
| AGTCGTAACTTTGCGGCAAA+TGG | 0.362498 | 5.4:+57779837 | None:intergenic |
| CTATGTACACTTCTACTTCA+TGG | 0.363522 | 5.4:-57778619 | MS.gene26192:CDS |
| GGTGGAAATTAGCTGTCTTA+TGG | 0.372422 | 5.4:-57778199 | MS.gene26192:CDS |
| GACTACACTCCAATGCATTC+AGG | 0.375734 | 5.4:+57778366 | None:intergenic |
| TAATTAAACAAGTCACCAAC+AGG | 0.396024 | 5.4:+57779229 | None:intergenic |
| GCCTTTCTTGTAATTTGTCC+TGG | 0.398351 | 5.4:+57779045 | None:intergenic |
| TACGACTTGCTAGCCATGTT+TGG | 0.399670 | 5.4:-57779821 | MS.gene26192:CDS |
| GAAAGAAGCTCATGCCTTGA+TGG | 0.405482 | 5.4:-57779587 | MS.gene26192:CDS |
| AGGAAAGAGAGTGTTGAGAT+TGG | 0.416473 | 5.4:+57782064 | None:intergenic |
| ATCATTTCATGAAAGAATCT+AGG | 0.419097 | 5.4:+57778123 | None:intergenic |
| GCACCTGGAGAGGACCTATC+TGG | 0.423204 | 5.4:-57779202 | MS.gene26192:CDS |
| AGAATGGTGCAGTAGAGGTT+TGG | 0.431010 | 5.4:-57781832 | MS.gene26192:intron |
| TTCTAGCTGCGTTACGATTG+TGG | 0.436159 | 5.4:-57778547 | MS.gene26192:CDS |
| GATTGGTCGGTGTTTGTTGT+TGG | 0.440882 | 5.4:+57782081 | None:intergenic |
| ATGAAATTATAGTCATGAAA+TGG | 0.451259 | 5.4:-57778454 | MS.gene26192:CDS |
| CTTGTTATACGAAGTTGGTA+AGG | 0.457725 | 5.4:-57779891 | MS.gene26192:CDS |
| TCTAGCTGCGTTACGATTGT+GGG | 0.460277 | 5.4:-57778546 | MS.gene26192:CDS |
| GTTTGCTTGTTATACGAAGT+TGG | 0.462021 | 5.4:-57779896 | MS.gene26192:CDS |
| CTACCTTTCCTCACTCTGGC+GGG | 0.467292 | 5.4:-57782017 | MS.gene26192:intron |
| GAATGGTGCAGTAGAGGTTT+GGG | 0.467488 | 5.4:-57781831 | MS.gene26192:intron |
| GTGCTGTGAGAGATCTTAAG+AGG | 0.468743 | 5.4:-57781809 | MS.gene26192:CDS |
| CACCAGGTTCTATTATGCTA+TGG | 0.472726 | 5.4:-57778731 | MS.gene26192:intron |
| TTGGGTTTGGGCTGCTGCAA+CGG | 0.478013 | 5.4:-57779524 | MS.gene26192:intron |
| CTCCAATGCATTCAGGAGTA+AGG | 0.484839 | 5.4:+57778373 | None:intergenic |
| TGTTAAACTTATGTCATTCA+GGG | 0.485910 | 5.4:-57778318 | MS.gene26192:CDS |
| TATGAAAACGAGAAGGTCAA+TGG | 0.486866 | 5.4:-57778225 | MS.gene26192:CDS |
| AACTTTGCGGCAAATGGACG+AGG | 0.497147 | 5.4:+57779843 | None:intergenic |
| TGCGGCAAATGGACGAGGTA+AGG | 0.498856 | 5.4:+57779848 | None:intergenic |
| AGCTATGTCTTGCTGTCAAT+AGG | 0.499734 | 5.4:-57781716 | MS.gene26192:CDS |
| GCTAGCAAGTCGTAACTTTG+CGG | 0.510142 | 5.4:+57779830 | None:intergenic |
| GTTTCTACCTTTCCTCACTC+TGG | 0.514945 | 5.4:-57782021 | MS.gene26192:CDS |
| TAGCTGTCTTATGGAGGCTC+GGG | 0.520018 | 5.4:-57778190 | MS.gene26192:CDS |
| GCCAGGACAAATTACAAGAA+AGG | 0.522389 | 5.4:-57779046 | MS.gene26192:CDS |
| AAGAGAGTGTTGAGATTGGT+CGG | 0.523760 | 5.4:+57782068 | None:intergenic |
| TTAGCTGTCTTATGGAGGCT+CGG | 0.525826 | 5.4:-57778191 | MS.gene26192:CDS |
| GAATGTATCTCTTATTGCAA+TGG | 0.527122 | 5.4:-57778149 | MS.gene26192:CDS |
| TATATTATGAGCTTCTAAGA+AGG | 0.528878 | 5.4:+57778283 | None:intergenic |
| GCTGGTTGTTTATGCCCTGT+TGG | 0.537691 | 5.4:-57779244 | MS.gene26192:CDS |
| TTTCTCAAATTCACCAAACA+TGG | 0.542605 | 5.4:+57779808 | None:intergenic |
| TACCTTACTCCTGAATGCAT+TGG | 0.549106 | 5.4:-57778375 | MS.gene26192:CDS |
| GAAGTAGAAGTGTACATAGC+AGG | 0.549201 | 5.4:+57778623 | None:intergenic |
| AAACATGAGTTCCTCCATCA+AGG | 0.553023 | 5.4:+57779573 | None:intergenic |
| CTCAGAGACTAACTGATGGT+GGG | 0.556902 | 5.4:-57779102 | MS.gene26192:CDS |
| TTGTTTAATTACGATGCACC+TGG | 0.559289 | 5.4:-57779217 | MS.gene26192:CDS |
| ATACCAGATAGGTCCTCTCC+AGG | 0.561435 | 5.4:+57779199 | None:intergenic |
| TCTCAGAGACTAACTGATGG+TGG | 0.562053 | 5.4:-57779103 | MS.gene26192:CDS |
| AAGAACATGGAAGCTTTGAA+AGG | 0.566087 | 5.4:-57782143 | MS.gene26192:CDS |
| GTGTACATAGCAGGTTCCAA+AGG | 0.569923 | 5.4:+57778632 | None:intergenic |
| TCTACCTTTCCTCACTCTGG+CGG | 0.572108 | 5.4:-57782018 | MS.gene26192:CDS |
| AAATTACAAGAAAGGCGACC+AGG | 0.572285 | 5.4:-57779038 | MS.gene26192:intron |
| CTCGGACATTGCATATACCA+TGG | 0.573706 | 5.4:-57779273 | MS.gene26192:CDS |
| CTACGTCGTCAATACCAGAT+AGG | 0.574667 | 5.4:+57779188 | None:intergenic |
| CGAGAAGGTCAATGGATAGG+TGG | 0.576592 | 5.4:-57778217 | MS.gene26192:CDS |
| TTGTTATACGAAGTTGGTAA+GGG | 0.583923 | 5.4:-57779890 | MS.gene26192:CDS |
| GCTTTGAAAGGTTCTTAACA+TGG | 0.587490 | 5.4:-57782131 | MS.gene26192:CDS |
| TCGGACATTGCATATACCAT+GGG | 0.588653 | 5.4:-57779272 | MS.gene26192:CDS |
| GTATCGTCTTCAATAGATGT+TGG | 0.593968 | 5.4:+57778395 | None:intergenic |
| TAGAAGATGGAACAAGAACA+TGG | 0.594815 | 5.4:-57782156 | None:intergenic |
| TAATTACGATGCACCTGGAG+AGG | 0.595408 | 5.4:-57779212 | MS.gene26192:CDS |
| TGCTGTGAGAGATCTTAAGA+GGG | 0.596123 | 5.4:-57781808 | MS.gene26192:CDS |
| GGAAATTAGCTGTCTTATGG+AGG | 0.596583 | 5.4:-57778196 | MS.gene26192:CDS |
| TGTACATAGCAGGTTCCAAA+GGG | 0.596868 | 5.4:+57778633 | None:intergenic |
| CATATACCATGGGATGAAGC+TGG | 0.602506 | 5.4:-57779262 | MS.gene26192:CDS |
| CATAATAAAAGGAGGTCTGT+CGG | 0.606789 | 5.4:-57778515 | MS.gene26192:CDS |
| AAACGAGAAGGTCAATGGAT+AGG | 0.609984 | 5.4:-57778220 | MS.gene26192:CDS |
| GGGAGTTACCCGCCAGAGTG+AGG | 0.610390 | 5.4:+57782009 | None:intergenic |
| AATTCTCAGAGACTAACTGA+TGG | 0.621388 | 5.4:-57779106 | MS.gene26192:CDS |
| GCAGAGAGAATGACCAAGAG+AGG | 0.631070 | 5.4:+57782044 | None:intergenic |
| AGAAGCTCATGCCTTGATGG+AGG | 0.631236 | 5.4:-57779584 | MS.gene26192:CDS |
| AAACAACCAGCTTCATCCCA+TGG | 0.633574 | 5.4:+57779256 | None:intergenic |
| TTTCATCTATGAAAACGAGA+AGG | 0.633735 | 5.4:-57778232 | MS.gene26192:CDS |
| TTGGTGAATCTGATATTCCA+AGG | 0.633842 | 5.4:+57782100 | None:intergenic |
| GCAGCTAGAAGCGCAAACGA+AGG | 0.634016 | 5.4:+57778560 | None:intergenic |
| TCACTCTATATCCATCCCAT+CGG | 0.638406 | 5.4:-57778587 | MS.gene26192:CDS |
| ATCAGGTGGATGAAGCTATG+TGG | 0.641575 | 5.4:-57779648 | MS.gene26192:intron |
| TTAACATGGACATCACACCT+TGG | 0.645130 | 5.4:-57782117 | MS.gene26192:CDS |
| TTACCCGCCAGAGTGAGGAA+AGG | 0.662573 | 5.4:+57782014 | None:intergenic |
| CAACCCCTCATAATAAAAGG+AGG | 0.668522 | 5.4:-57778523 | MS.gene26192:CDS |
| AATAAGAGATACATTCAATG+AGG | 0.670385 | 5.4:+57778156 | None:intergenic |
| GTAAGGGAAAGACTTCAAGA+TGG | 0.690936 | 5.4:-57779874 | MS.gene26192:CDS |
| GCTGTGAGAGATCTTAAGAG+GGG | 0.713261 | 5.4:-57781807 | MS.gene26192:CDS |
| AATTAAACAAGTCACCAACA+GGG | 0.716642 | 5.4:+57779230 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATACAAAAAACTAT+TGG | + | chr5.4:57778951-57778970 | None:intergenic | 10.0% |
| !! | TGTAATTGTAATAAAAAAAA+AGG | + | chr5.4:57778311-57778330 | None:intergenic | 10.0% |
| !!! | ATTTAATTTTTGAAATTGTA+AGG | - | chr5.4:57778963-57778982 | MS.gene26192:intron | 10.0% |
| !!! | ATTTATGATAAATTTTATTC+AGG | + | chr5.4:57781333-57781352 | None:intergenic | 10.0% |
| !!! | TTTATGATAAATTTTATTCA+GGG | + | chr5.4:57781332-57781351 | None:intergenic | 10.0% |
| !! | CAATAATTCTAACAAAAAAT+TGG | + | chr5.4:57780224-57780243 | None:intergenic | 15.0% |
| !! | TCGAATTGAAAATATTTATA+TGG | + | chr5.4:57781445-57781464 | None:intergenic | 15.0% |
| !!! | AAAAATGTAAAGTTTTGATT+GGG | + | chr5.4:57778288-57778307 | None:intergenic | 15.0% |
| !! | AATTGAATATGTAAACCTAA+TGG | + | chr5.4:57781293-57781312 | None:intergenic | 20.0% |
| !! | ATGAAATTATAGTCATGAAA+TGG | - | chr5.4:57781820-57781839 | MS.gene26192:CDS | 20.0% |
| !! | ATTCTAACAAAAAATTGGAT+TGG | + | chr5.4:57780219-57780238 | None:intergenic | 20.0% |
| !! | GAAAGGTAATTAAAATTAAG+AGG | + | chr5.4:57780183-57780202 | None:intergenic | 20.0% |
| !! | TGATGTATGATTTCAATTTA+GGG | - | chr5.4:57779113-57779132 | MS.gene26192:CDS | 20.0% |
| !!! | ATAAGTTATTTCTATAGCAA+AGG | + | chr5.4:57780075-57780094 | None:intergenic | 20.0% |
| !!! | ATTTTTTAGTTTATCTCGTT+AGG | - | chr5.4:57780518-57780537 | MS.gene26192:intron | 20.0% |
| !!! | GAAAAATGTAAAGTTTTGAT+TGG | + | chr5.4:57778289-57778308 | None:intergenic | 20.0% |
| !!! | GAAATTTTAACATAACCATT+AGG | - | chr5.4:57781275-57781294 | MS.gene26192:intron | 20.0% |
| !!! | GTAGATAATTTTCAATCAAA+TGG | - | chr5.4:57781105-57781124 | MS.gene26192:intron | 20.0% |
| !!! | TAAGTTATTTCTATAGCAAA+GGG | + | chr5.4:57780074-57780093 | None:intergenic | 20.0% |
| ! | AACAAATTGAGGACTATAAA+AGG | + | chr5.4:57779265-57779284 | None:intergenic | 25.0% |
| ! | AATTTGATCCATGAAATAGT+AGG | - | chr5.4:57778699-57778718 | MS.gene26192:CDS | 25.0% |
| ! | ACTAAATTAACCGATCTAAA+GGG | + | chr5.4:57779065-57779084 | None:intergenic | 25.0% |
| ! | ATGTTGTAACAGACTTATTT+CGG | - | chr5.4:57780807-57780826 | MS.gene26192:intron | 25.0% |
| ! | ATTGAAATCATACATCACAT+TGG | + | chr5.4:57779110-57779129 | None:intergenic | 25.0% |
| ! | CATGACTATAATTTCATTGT+TGG | + | chr5.4:57781817-57781836 | None:intergenic | 25.0% |
| ! | GTGATGTATGATTTCAATTT+AGG | - | chr5.4:57779112-57779131 | MS.gene26192:CDS | 25.0% |
| ! | TGACATTGCAAAATGTTAAT+CGG | - | chr5.4:57778770-57778789 | MS.gene26192:intron | 25.0% |
| ! | TGTTAAACTTATGTCATTCA+GGG | - | chr5.4:57781956-57781975 | MS.gene26192:intron | 25.0% |
| ! | TGTTAGAATTATTGTATGCA+TGG | - | chr5.4:57780230-57780249 | MS.gene26192:intron | 25.0% |
| ! | TTCTTAACTTTACTTTAGTG+AGG | - | chr5.4:57778612-57778631 | MS.gene26192:CDS | 25.0% |
| ! | TTGGTTCAATAAACAATGAA+AGG | + | chr5.4:57780200-57780219 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTATGTCATTC+AGG | - | chr5.4:57781955-57781974 | MS.gene26192:intron | 25.0% |
| ! | TTTACTCATGACAACTAAAA+TGG | + | chr5.4:57780919-57780938 | None:intergenic | 25.0% |
| !! | TAGGTTAGATTATAGCATTT+TGG | - | chr5.4:57780537-57780556 | MS.gene26192:intron | 25.0% |
| !! | TATATTATGAGCTTCTAAGA+AGG | + | chr5.4:57781994-57782013 | None:intergenic | 25.0% |
| !! | TTTAAGTCTTAGAGTATTCT+TGG | + | chr5.4:57779196-57779215 | None:intergenic | 25.0% |
| !!! | AAACTTTGCATTTGTTTTCT+TGG | - | chr5.4:57778330-57778349 | MS.gene26192:CDS | 25.0% |
| !!! | AACTTTGCATTTGTTTTCTT+GGG | - | chr5.4:57778331-57778350 | MS.gene26192:CDS | 25.0% |
| !!! | AGTTTTTAACATTTAAGGCT+TGG | - | chr5.4:57780731-57780750 | MS.gene26192:intron | 25.0% |
| !!! | CATCTTAATTTGTGATTATC+AGG | - | chr5.4:57780609-57780628 | MS.gene26192:intron | 25.0% |
| !!! | GCTGTTTTCATAAGTTATAT+TGG | + | chr5.4:57780018-57780037 | None:intergenic | 25.0% |
| !!! | GTTTTTAACATTTAAGGCTT+GGG | - | chr5.4:57780732-57780751 | MS.gene26192:intron | 25.0% |
| !!! | TGTTGAACATTGATTCATTT+TGG | - | chr5.4:57780848-57780867 | MS.gene26192:intron | 25.0% |
| AACTTAACATGCTTGACATT+TGG | + | chr5.4:57779782-57779801 | None:intergenic | 30.0% | |
| AATTAAACAAGTCACCAACA+GGG | + | chr5.4:57781047-57781066 | None:intergenic | 30.0% | |
| ACCTAATTAACAGGTGATAA+TGG | - | chr5.4:57778919-57778938 | MS.gene26192:intron | 30.0% | |
| ATCATTCCCTATCTACTAAA+TGG | + | chr5.4:57781508-57781527 | None:intergenic | 30.0% | |
| ATTCCACCATTTAGTAGATA+GGG | - | chr5.4:57781499-57781518 | MS.gene26192:intron | 30.0% | |
| ATTGTATGCATGGTTAAATC+AGG | - | chr5.4:57780240-57780259 | MS.gene26192:intron | 30.0% | |
| CCAAAACAGTACAACAAAAA+GGG | + | chr5.4:57778422-57778441 | None:intergenic | 30.0% | |
| CTATGGAACATACACAAATT+TGG | - | chr5.4:57781560-57781579 | MS.gene26192:intron | 30.0% | |
| GAATGTATCTCTTATTGCAA+TGG | - | chr5.4:57782125-57782144 | MS.gene26192:CDS | 30.0% | |
| GACTAAATTAACCGATCTAA+AGG | + | chr5.4:57779066-57779085 | None:intergenic | 30.0% | |
| GATACATTCCTACTATTTCA+TGG | + | chr5.4:57778710-57778729 | None:intergenic | 30.0% | |
| GCCTTAAATGTTAAAAACTG+AGG | + | chr5.4:57780730-57780749 | None:intergenic | 30.0% | |
| TAATTAAACAAGTCACCAAC+AGG | + | chr5.4:57781048-57781067 | None:intergenic | 30.0% | |
| TACAAAAAGCCAAATCAGAA+TGG | - | chr5.4:57780665-57780684 | MS.gene26192:intron | 30.0% | |
| TCAAAAACCAGATATCTTCT+CGG | - | chr5.4:57780983-57781002 | MS.gene26192:intron | 30.0% | |
| TCCAAAACAGTACAACAAAA+AGG | + | chr5.4:57778423-57778442 | None:intergenic | 30.0% | |
| TCCATTATCACCTGTTAATT+AGG | + | chr5.4:57778923-57778942 | None:intergenic | 30.0% | |
| TGTAGACTATGAACTATTAC+AGG | - | chr5.4:57781402-57781421 | MS.gene26192:intron | 30.0% | |
| TTCTTGGGTGATTAATCAAA+GGG | - | chr5.4:57778346-57778365 | MS.gene26192:CDS | 30.0% | |
| TTTCATCTATGAAAACGAGA+AGG | - | chr5.4:57782042-57782061 | MS.gene26192:CDS | 30.0% | |
| TTTCTCAAATTCACCAAACA+TGG | + | chr5.4:57780469-57780488 | None:intergenic | 30.0% | |
| TTTCTTGGGTGATTAATCAA+AGG | - | chr5.4:57778345-57778364 | MS.gene26192:CDS | 30.0% | |
| TTTGTAATTTCCTTAACTGC+AGG | + | chr5.4:57779005-57779024 | None:intergenic | 30.0% | |
| ! | CTAGTCATTAAAGCAGATTT+TGG | + | chr5.4:57778512-57778531 | None:intergenic | 30.0% |
| ! | GCCTCAGTTTTTAACATTTA+AGG | - | chr5.4:57780726-57780745 | MS.gene26192:intron | 30.0% |
| ! | GGGATGAAAATTTTGTCATT+CGG | + | chr5.4:57781624-57781643 | None:intergenic | 30.0% |
| ! | TGACAAAATTTTCATCCCTT+TGG | - | chr5.4:57781626-57781645 | MS.gene26192:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr5.4:57779927-57779946 | MS.gene26192:intron | 30.0% |
| !! | CTTAATTTGTGATTATCAGG+TGG | - | chr5.4:57780612-57780631 | MS.gene26192:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr5.4:57779928-57779947 | MS.gene26192:intron | 30.0% |
| !! | TTGTTATACGAAGTTGGTAA+GGG | - | chr5.4:57780384-57780403 | MS.gene26192:intron | 30.0% |
| !! | TTTTGTACAGCTTTTTCTGT+TGG | + | chr5.4:57780652-57780671 | None:intergenic | 30.0% |
| AAGAACAAAAACCTGAACAG+AGG | + | chr5.4:57778597-57778616 | None:intergenic | 35.0% | |
| AATAGAACCTGGTGAAAACA+AGG | + | chr5.4:57781537-57781556 | None:intergenic | 35.0% | |
| AATTCTCAGAGACTAACTGA+TGG | - | chr5.4:57781168-57781187 | MS.gene26192:intron | 35.0% | |
| ACAAATTGTTGCCTGTCTTA+TGG | - | chr5.4:57781378-57781397 | MS.gene26192:intron | 35.0% | |
| AGCTTCTTTCCATTCTGATT+TGG | + | chr5.4:57780677-57780696 | None:intergenic | 35.0% | |
| ATAAGCGCTCATCATGATAA+GGG | - | chr5.4:57780097-57780116 | MS.gene26192:intron | 35.0% | |
| ATAGTCTACATCCATAAGAC+AGG | + | chr5.4:57781392-57781411 | None:intergenic | 35.0% | |
| ATTCCCTATCTACTAAATGG+TGG | + | chr5.4:57781505-57781524 | None:intergenic | 35.0% | |
| CATAATAAAAGGAGGTCTGT+CGG | - | chr5.4:57781759-57781778 | MS.gene26192:CDS | 35.0% | |
| CATTCCACCATTTAGTAGAT+AGG | - | chr5.4:57781498-57781517 | MS.gene26192:intron | 35.0% | |
| CTATGTACACTTCTACTTCA+TGG | - | chr5.4:57781655-57781674 | MS.gene26192:intron | 35.0% | |
| GAAACCAAATCCTAACAAGT+AGG | + | chr5.4:57780273-57780292 | None:intergenic | 35.0% | |
| GTATCGTCTTCAATAGATGT+TGG | + | chr5.4:57781882-57781901 | None:intergenic | 35.0% | |
| TATGAAAACGAGAAGGTCAA+TGG | - | chr5.4:57782049-57782068 | MS.gene26192:CDS | 35.0% | |
| TGAAGATAGAGCGAAAACAA+TGG | + | chr5.4:57781480-57781499 | None:intergenic | 35.0% | |
| TGTGCAATGTTAGAGACTAA+TGG | - | chr5.4:57779867-57779886 | MS.gene26192:CDS | 35.0% | |
| TTAACATGCTTGACATTTGG+TGG | + | chr5.4:57779779-57779798 | None:intergenic | 35.0% | |
| TTAGAGACTAATGGTCTGTT+TGG | - | chr5.4:57779876-57779895 | MS.gene26192:CDS | 35.0% | |
| TTCCATAGCATAATAGAACC+TGG | + | chr5.4:57781548-57781567 | None:intergenic | 35.0% | |
| TTGGTGAATCTGATATTCCA+AGG | + | chr5.4:57778177-57778196 | None:intergenic | 35.0% | |
| TTGTTTAATTACGATGCACC+TGG | - | chr5.4:57781057-57781076 | MS.gene26192:intron | 35.0% | |
| ! | AACATTTAAGGCTTGGGTTT+GGG | - | chr5.4:57780738-57780757 | MS.gene26192:intron | 35.0% |
| ! | ACAGACCTCCTTTTATTATG+AGG | + | chr5.4:57781759-57781778 | None:intergenic | 35.0% |
| ! | AGACCTCCTTTTATTATGAG+GGG | + | chr5.4:57781757-57781776 | None:intergenic | 35.0% |
| ! | AGGCAATTTGGTTTATGAAC+TGG | + | chr5.4:57779843-57779862 | None:intergenic | 35.0% |
| ! | ATTTGGTTTATGAACTGGAC+TGG | + | chr5.4:57779838-57779857 | None:intergenic | 35.0% |
| ! | CAGACCTCCTTTTATTATGA+GGG | + | chr5.4:57781758-57781777 | None:intergenic | 35.0% |
| ! | GCTTTAAGCTGCAAATAAGT+TGG | - | chr5.4:57780125-57780144 | MS.gene26192:intron | 35.0% |
| ! | TAACATTTAAGGCTTGGGTT+TGG | - | chr5.4:57780737-57780756 | MS.gene26192:intron | 35.0% |
| !! | AAGAACATGGAAGCTTTGAA+AGG | - | chr5.4:57778131-57778150 | MS.gene26192:CDS | 35.0% |
| !! | AATAAGTTGGTTGTCCAAAC+AGG | - | chr5.4:57780138-57780157 | MS.gene26192:intron | 35.0% |
| !! | ATGCATATTGCTTTTATGCC+AGG | - | chr5.4:57781211-57781230 | MS.gene26192:intron | 35.0% |
| !! | CCCTTTTTGTTGTACTGTTT+TGG | - | chr5.4:57778419-57778438 | MS.gene26192:CDS | 35.0% |
| !! | CCTCAATTTGTTGACTTGAT+GGG | - | chr5.4:57779273-57779292 | MS.gene26192:CDS | 35.0% |
| !! | CTTGTTATACGAAGTTGGTA+AGG | - | chr5.4:57780383-57780402 | MS.gene26192:intron | 35.0% |
| !! | GACTAGTGAGAGTGTTATTA+TGG | - | chr5.4:57778526-57778545 | MS.gene26192:CDS | 35.0% |
| !! | GCTTTGAAAGGTTCTTAACA+TGG | - | chr5.4:57778143-57778162 | MS.gene26192:CDS | 35.0% |
| !! | GTTTGCTTGTTATACGAAGT+TGG | - | chr5.4:57780378-57780397 | MS.gene26192:intron | 35.0% |
| !! | TCCTCAATTTGTTGACTTGA+TGG | - | chr5.4:57779272-57779291 | MS.gene26192:CDS | 35.0% |
| !!! | TAAGTTACCTTGTTTTCACC+AGG | - | chr5.4:57781527-57781546 | MS.gene26192:intron | 35.0% |
| !!! | TGTTGTACTGTTTTGGAGAA+TGG | - | chr5.4:57778426-57778445 | MS.gene26192:CDS | 35.0% |
| AAACATGAGTTCCTCCATCA+AGG | + | chr5.4:57780704-57780723 | None:intergenic | 40.0% | |
| AAACGAGAAGGTCAATGGAT+AGG | - | chr5.4:57782054-57782073 | MS.gene26192:CDS | 40.0% | |
| AAATTACAAGAAAGGCGACC+AGG | - | chr5.4:57781236-57781255 | MS.gene26192:intron | 40.0% | |
| AACAGAGTCTGATCAAGAGA+CGG | - | chr5.4:57778896-57778915 | MS.gene26192:intron | 40.0% | |
| AAGAGACGGACCTAATTAAC+AGG | - | chr5.4:57778910-57778929 | MS.gene26192:intron | 40.0% | |
| ACAAATGTCTACGCCTTAAC+AGG | + | chr5.4:57779723-57779742 | None:intergenic | 40.0% | |
| ACATCACATTGGACTCATGA+AGG | + | chr5.4:57779099-57779118 | None:intergenic | 40.0% | |
| ATTGCACACTTCAGGCAATT+TGG | + | chr5.4:57779855-57779874 | None:intergenic | 40.0% | |
| CAACCCCTCATAATAAAAGG+AGG | - | chr5.4:57781751-57781770 | MS.gene26192:CDS | 40.0% | |
| CACCAGGTTCTATTATGCTA+TGG | - | chr5.4:57781543-57781562 | MS.gene26192:intron | 40.0% | |
| CACTTCTACTTCATGGTCTA+AGG | - | chr5.4:57781662-57781681 | MS.gene26192:intron | 40.0% | |
| CATAAGCGCTCATCATGATA+AGG | - | chr5.4:57780096-57780115 | MS.gene26192:intron | 40.0% | |
| CATTGATCCTAGTACCAGAA+AGG | + | chr5.4:57780790-57780809 | None:intergenic | 40.0% | |
| CCCATCAAGTCAACAAATTG+AGG | + | chr5.4:57779276-57779295 | None:intergenic | 40.0% | |
| CGTTCTGATTCTAGTCTGAA+CGG | + | chr5.4:57779229-57779248 | None:intergenic | 40.0% | |
| CTTGACCATTTAGACCTGTT+TGG | + | chr5.4:57780155-57780174 | None:intergenic | 40.0% | |
| GACAAGTAATGCGCATGAAA+AGG | + | chr5.4:57780885-57780904 | None:intergenic | 40.0% | |
| GACTAATGGTCTGTTTGGAT+TGG | - | chr5.4:57779881-57779900 | MS.gene26192:CDS | 40.0% | |
| GCCAGGACAAATTACAAGAA+AGG | - | chr5.4:57781228-57781247 | MS.gene26192:intron | 40.0% | |
| GGAAATTAGCTGTCTTATGG+AGG | - | chr5.4:57782078-57782097 | MS.gene26192:CDS | 40.0% | |
| GGTGGAAATTAGCTGTCTTA+TGG | - | chr5.4:57782075-57782094 | MS.gene26192:CDS | 40.0% | |
| GTAAGGGAAAGACTTCAAGA+TGG | - | chr5.4:57780400-57780419 | MS.gene26192:intron | 40.0% | |
| GTTGTCCAAACAGGTCTAAA+TGG | - | chr5.4:57780147-57780166 | MS.gene26192:intron | 40.0% | |
| TACCTTACTCCTGAATGCAT+TGG | - | chr5.4:57781899-57781918 | MS.gene26192:intron | 40.0% | |
| TCACTCTATATCCATCCCAT+CGG | - | chr5.4:57781687-57781706 | MS.gene26192:intron | 40.0% | |
| TCGGACATTGCATATACCAT+GGG | - | chr5.4:57781002-57781021 | MS.gene26192:intron | 40.0% | |
| TCTCTAACATTGCACACTTC+AGG | + | chr5.4:57779863-57779882 | None:intergenic | 40.0% | |
| TGCTGTGAGAGATCTTAAGA+GGG | - | chr5.4:57778466-57778485 | MS.gene26192:CDS | 40.0% | |
| TGTACATAGCAGGTTCCAAA+GGG | + | chr5.4:57781644-57781663 | None:intergenic | 40.0% | |
| TTAACATGGACATCACACCT+TGG | - | chr5.4:57778157-57778176 | MS.gene26192:CDS | 40.0% | |
| TTAGTAAGCTCATGCCTTTC+TGG | - | chr5.4:57780773-57780792 | MS.gene26192:intron | 40.0% | |
| TTGGAGCTTCTTGAACACTA+TGG | - | chr5.4:57781579-57781598 | MS.gene26192:intron | 40.0% | |
| TTGTTCACGTGTTACAACAG+TGG | - | chr5.4:57779152-57779171 | MS.gene26192:CDS | 40.0% | |
| ! | AATCGGATTTGTTCCTCTGT+TGG | - | chr5.4:57778787-57778806 | MS.gene26192:intron | 40.0% |
| ! | AGCTATGTCTTGCTGTCAAT+AGG | - | chr5.4:57778558-57778577 | MS.gene26192:CDS | 40.0% |
| ! | GAAGTAGAAGTGTACATAGC+AGG | + | chr5.4:57781654-57781673 | None:intergenic | 40.0% |
| ! | GACAGGCAACAATTTGTTTC+TGG | + | chr5.4:57781375-57781394 | None:intergenic | 40.0% |
| ! | GCCTTTCTTGTAATTTGTCC+TGG | + | chr5.4:57781232-57781251 | None:intergenic | 40.0% |
| ! | TGAGCCTACTTGTTAGGATT+TGG | - | chr5.4:57780266-57780285 | MS.gene26192:intron | 40.0% |
| !! | AAGAGAGTGTTGAGATTGGT+CGG | + | chr5.4:57778209-57778228 | None:intergenic | 40.0% |
| !! | ACATTTGGTGGACTGTAAAC+TGG | + | chr5.4:57779767-57779786 | None:intergenic | 40.0% |
| !! | AGGAAAGAGAGTGTTGAGAT+TGG | + | chr5.4:57778213-57778232 | None:intergenic | 40.0% |
| !! | TTTATGAACTGGACTGGCAT+GGG | + | chr5.4:57779832-57779851 | None:intergenic | 40.0% |
| AAACAACCAGCTTCATCCCA+TGG | + | chr5.4:57781021-57781040 | None:intergenic | 45.0% | |
| ACCAAACGTCAAGCCTGTTA+AGG | - | chr5.4:57779707-57779726 | MS.gene26192:intron | 45.0% | |
| AGAATGGTGCAGTAGAGGTT+TGG | - | chr5.4:57778442-57778461 | MS.gene26192:CDS | 45.0% | |
| AGGTCGTGAGACACTTGAAT+GGG | - | chr5.4:57779468-57779487 | MS.gene26192:intron | 45.0% | |
| AGTCGTAACTTTGCGGCAAA+TGG | + | chr5.4:57780440-57780459 | None:intergenic | 45.0% | |
| ATATAGCGAGCCACATGGTA+TGG | - | chr5.4:57779661-57779680 | MS.gene26192:intron | 45.0% | |
| ATCAGGTGGATGAAGCTATG+TGG | - | chr5.4:57780626-57780645 | MS.gene26192:intron | 45.0% | |
| ATTGTAAGGAGCAGACGATC+TGG | - | chr5.4:57778977-57778996 | MS.gene26192:intron | 45.0% | |
| CAACACTCTCTTTCCTCTCT+TGG | - | chr5.4:57778217-57778236 | MS.gene26192:CDS | 45.0% | |
| CATATACCATGGGATGAAGC+TGG | - | chr5.4:57781012-57781031 | MS.gene26192:intron | 45.0% | |
| CTACGTCGTCAATACCAGAT+AGG | + | chr5.4:57781089-57781108 | None:intergenic | 45.0% | |
| CTCAGAGACTAACTGATGGT+GGG | - | chr5.4:57781172-57781191 | MS.gene26192:intron | 45.0% | |
| CTCCAATGCATTCAGGAGTA+AGG | + | chr5.4:57781904-57781923 | None:intergenic | 45.0% | |
| CTCGGACATTGCATATACCA+TGG | - | chr5.4:57781001-57781020 | MS.gene26192:intron | 45.0% | |
| GAAAGAAGCTCATGCCTTGA+TGG | - | chr5.4:57780687-57780706 | MS.gene26192:intron | 45.0% | |
| GAATGGTGCAGTAGAGGTTT+GGG | - | chr5.4:57778443-57778462 | MS.gene26192:CDS | 45.0% | |
| GACTACACTCCAATGCATTC+AGG | + | chr5.4:57781911-57781930 | None:intergenic | 45.0% | |
| GCAATGTCCGAGAAGATATC+TGG | + | chr5.4:57780993-57781012 | None:intergenic | 45.0% | |
| GCTAGCAAGTCGTAACTTTG+CGG | + | chr5.4:57780447-57780466 | None:intergenic | 45.0% | |
| GCTGTGAGAGATCTTAAGAG+GGG | - | chr5.4:57778467-57778486 | MS.gene26192:CDS | 45.0% | |
| GGGCAACCCCTCATAATAAA+AGG | - | chr5.4:57781748-57781767 | MS.gene26192:CDS | 45.0% | |
| GTATAGACGACCATACCATG+TGG | + | chr5.4:57779674-57779693 | None:intergenic | 45.0% | |
| GTCGGACATCTTGCATATTC+TGG | - | chr5.4:57781777-57781796 | MS.gene26192:CDS | 45.0% | |
| GTGCTGTGAGAGATCTTAAG+AGG | - | chr5.4:57778465-57778484 | MS.gene26192:CDS | 45.0% | |
| GTGTACATAGCAGGTTCCAA+AGG | + | chr5.4:57781645-57781664 | None:intergenic | 45.0% | |
| GTTCCTACGAATACCAACAG+AGG | + | chr5.4:57778803-57778822 | None:intergenic | 45.0% | |
| GTTCCTCTGTTGGTATTCGT+AGG | - | chr5.4:57778797-57778816 | MS.gene26192:intron | 45.0% | |
| GTTTCTACCTTTCCTCACTC+TGG | - | chr5.4:57778253-57778272 | MS.gene26192:CDS | 45.0% | |
| TAATTACGATGCACCTGGAG+AGG | - | chr5.4:57781062-57781081 | MS.gene26192:intron | 45.0% | |
| TCAAGATATAGCGAGCCACA+TGG | - | chr5.4:57779656-57779675 | MS.gene26192:intron | 45.0% | |
| TCGCTCTAGTCCCTTTAGAT+CGG | - | chr5.4:57779052-57779071 | MS.gene26192:CDS | 45.0% | |
| TCTAGCTGCGTTACGATTGT+GGG | - | chr5.4:57781728-57781747 | MS.gene26192:CDS | 45.0% | |
| TCTCAGAGACTAACTGATGG+TGG | - | chr5.4:57781171-57781190 | MS.gene26192:intron | 45.0% | |
| TTAACAGGCTTGACGTTTGG+TGG | + | chr5.4:57779708-57779727 | None:intergenic | 45.0% | |
| TTAGCTGTCTTATGGAGGCT+CGG | - | chr5.4:57782083-57782102 | MS.gene26192:CDS | 45.0% | |
| TTCTTCTCTCTCCTCTGTTC+AGG | - | chr5.4:57778583-57778602 | MS.gene26192:CDS | 45.0% | |
| TTTGGAGAATGGTGCAGTAG+AGG | - | chr5.4:57778437-57778456 | MS.gene26192:CDS | 45.0% | |
| ! | GCAAACGAAGGTTTTCCGAT+GGG | + | chr5.4:57781705-57781724 | None:intergenic | 45.0% |
| ! | TTCTAGCTGCGTTACGATTG+TGG | - | chr5.4:57781727-57781746 | MS.gene26192:CDS | 45.0% |
| !! | AGGCATTGAGCCTACTTGTT+AGG | - | chr5.4:57780260-57780279 | MS.gene26192:intron | 45.0% |
| !! | CTGTGCAAATCAGCTTGTTG+TGG | + | chr5.4:57779495-57779514 | None:intergenic | 45.0% |
| !! | GATTGGTCGGTGTTTGTTGT+TGG | + | chr5.4:57778196-57778215 | None:intergenic | 45.0% |
| !! | GGTGGACTGTAAACTGGTAT+GGG | + | chr5.4:57779761-57779780 | None:intergenic | 45.0% |
| !! | GTTTATGAACTGGACTGGCA+TGG | + | chr5.4:57779833-57779852 | None:intergenic | 45.0% |
| !! | TACGACTTGCTAGCCATGTT+TGG | - | chr5.4:57780453-57780472 | MS.gene26192:intron | 45.0% |
| !! | TGGTGGACTGTAAACTGGTA+TGG | + | chr5.4:57779762-57779781 | None:intergenic | 45.0% |
| AACTTTGCGGCAAATGGACG+AGG | + | chr5.4:57780434-57780453 | None:intergenic | 50.0% | |
| ACCAGGTAGTGCACAACTCT+TGG | - | chr5.4:57781253-57781272 | MS.gene26192:intron | 50.0% | |
| AGAAGCTCATGCCTTGATGG+AGG | - | chr5.4:57780690-57780709 | MS.gene26192:intron | 50.0% | |
| AGCAAGATCCAACTCAGCAC+TGG | + | chr5.4:57779625-57779644 | None:intergenic | 50.0% | |
| AGGCTGGACTTTATTGGACG+AGG | - | chr5.4:57779572-57779591 | MS.gene26192:CDS | 50.0% | |
| ATACCAGATAGGTCCTCTCC+AGG | + | chr5.4:57781078-57781097 | None:intergenic | 50.0% | |
| CAGGTCGTGAGACACTTGAA+TGG | - | chr5.4:57779467-57779486 | MS.gene26192:intron | 50.0% | |
| CGAGAAGGTCAATGGATAGG+TGG | - | chr5.4:57782057-57782076 | MS.gene26192:CDS | 50.0% | |
| CGTTATTCGTACGTGACACG+CGG | - | chr5.4:57779397-57779416 | MS.gene26192:intron | 50.0% | |
| GCAGAGAGAATGACCAAGAG+AGG | + | chr5.4:57778233-57778252 | None:intergenic | 50.0% | |
| GCCTTAACAGGCTTGACGTT+TGG | + | chr5.4:57779711-57779730 | None:intergenic | 50.0% | |
| GCTGGTTGTTTATGCCCTGT+TGG | - | chr5.4:57781030-57781049 | MS.gene26192:intron | 50.0% | |
| GGTCGTGAGACACTTGAATG+GGG | - | chr5.4:57779469-57779488 | MS.gene26192:intron | 50.0% | |
| GTATTCTTGGAGCTCCTCCT+AGG | + | chr5.4:57779183-57779202 | None:intergenic | 50.0% | |
| GTGCTGAGGCTGGACTTTAT+TGG | - | chr5.4:57779566-57779585 | MS.gene26192:CDS | 50.0% | |
| GTGGCTCGCTATATCTTGAC+TGG | + | chr5.4:57779655-57779674 | None:intergenic | 50.0% | |
| TAGCTGTCTTATGGAGGCTC+GGG | - | chr5.4:57782084-57782103 | MS.gene26192:CDS | 50.0% | |
| TCAACTTCACGTGCGCTGTA+TGG | + | chr5.4:57779356-57779375 | None:intergenic | 50.0% | |
| TCCAAGAGTTGTGCACTACC+TGG | + | chr5.4:57781257-57781276 | None:intergenic | 50.0% | |
| TCTACCTTTCCTCACTCTGG+CGG | - | chr5.4:57778256-57778275 | MS.gene26192:CDS | 50.0% | |
| TGAAAGCCAAGCTAGTGCTG+AGG | - | chr5.4:57779552-57779571 | MS.gene26192:CDS | 50.0% | |
| TTACAACAGTGGAGCTGCCT+AGG | - | chr5.4:57779163-57779182 | MS.gene26192:CDS | 50.0% | |
| ! | ACGAAGGTTTTCCGATGGGA+TGG | + | chr5.4:57781701-57781720 | None:intergenic | 50.0% |
| ! | CACTCAAACCAGTGCTGAGT+TGG | - | chr5.4:57779614-57779633 | MS.gene26192:CDS | 50.0% |
| ! | CGATCTGGTTCCTGCAGTTA+AGG | - | chr5.4:57778992-57779011 | MS.gene26192:intron | 50.0% |
| ! | CGCAAACGAAGGTTTTCCGA+TGG | + | chr5.4:57781706-57781725 | None:intergenic | 50.0% |
| ! | CTGATTTGCACAGCCCAGTT+GGG | - | chr5.4:57779502-57779521 | MS.gene26192:intron | 50.0% |
| ! | GCTCATGCCTTTCTGGTACT+AGG | - | chr5.4:57780780-57780799 | MS.gene26192:intron | 50.0% |
| ! | TGACTTGATGGGTCTCTCGT+TGG | - | chr5.4:57779284-57779303 | MS.gene26192:intron | 50.0% |
| ! | TGATTTGCACAGCCCAGTTG+GGG | - | chr5.4:57779503-57779522 | MS.gene26192:intron | 50.0% |
| ! | TTGATGGGTCTCTCGTTGGT+TGG | - | chr5.4:57779288-57779307 | MS.gene26192:intron | 50.0% |
| !! | ACGTTTGGTGGACTGTGGTT+TGG | + | chr5.4:57779696-57779715 | None:intergenic | 50.0% |
| CTACCTTTCCTCACTCTGGC+GGG | - | chr5.4:57778257-57778276 | MS.gene26192:CDS | 55.0% | |
| GATTTGCACAGCCCAGTTGG+GGG | - | chr5.4:57779504-57779523 | MS.gene26192:intron | 55.0% | |
| GCTTACGTAACTGTGCTGCG+TGG | - | chr5.4:57779444-57779463 | MS.gene26192:intron | 55.0% | |
| GGTACGGCTACAACTGTGCA+TGG | - | chr5.4:57779313-57779332 | MS.gene26192:intron | 55.0% | |
| TGCGGCAAATGGACGAGGTA+AGG | + | chr5.4:57780429-57780448 | None:intergenic | 55.0% | |
| TTACCCGCCAGAGTGAGGAA+AGG | + | chr5.4:57778263-57778282 | None:intergenic | 55.0% | |
| TTGGGTTTGGGCTGCTGCAA+CGG | - | chr5.4:57780750-57780769 | MS.gene26192:intron | 55.0% | |
| ! | CTCTCGTTGGTTGGCTGGTA+CGG | - | chr5.4:57779297-57779316 | MS.gene26192:intron | 55.0% |
| ! | GCAGCTAGAAGCGCAAACGA+AGG | + | chr5.4:57781717-57781736 | None:intergenic | 55.0% |
| !! | GCTGATTTGCACAGCCCAGT+TGG | - | chr5.4:57779501-57779520 | MS.gene26192:intron | 55.0% |
| !! | GCTTGACGTTTGGTGGACTG+TGG | + | chr5.4:57779701-57779720 | None:intergenic | 55.0% |
| ACGTAACTGTGCTGCGTGGC+AGG | - | chr5.4:57779448-57779467 | MS.gene26192:intron | 60.0% | |
| CAACAGTGGAGCTGCCTAGG+AGG | - | chr5.4:57779166-57779185 | MS.gene26192:CDS | 60.0% | |
| GCACCTGGAGAGGACCTATC+TGG | - | chr5.4:57781072-57781091 | MS.gene26192:intron | 60.0% | |
| GTCCAGCCTCAGCACTAGCT+TGG | + | chr5.4:57779561-57779580 | None:intergenic | 60.0% | |
| ! | AGCCAAGCTAGTGCTGAGGC+TGG | - | chr5.4:57779556-57779575 | MS.gene26192:CDS | 60.0% |
| ! | TGGGTCTCTCGTTGGTTGGC+TGG | - | chr5.4:57779292-57779311 | MS.gene26192:intron | 60.0% |
| GGGAGTTACCCGCCAGAGTG+AGG | + | chr5.4:57778268-57778287 | None:intergenic | 65.0% | |
| ACGCCAAGCGCGCCCCCAAC+TGG | + | chr5.4:57779519-57779538 | None:intergenic | 75.0% | |
| CGCCAAGCGCGCCCCCAACT+GGG | + | chr5.4:57779518-57779537 | None:intergenic | 75.0% | |
| ! | AGCCCAGTTGGGGGCGCGCT+TGG | - | chr5.4:57779513-57779532 | MS.gene26192:intron | 75.0% |
| ! | AGTTGGGGGCGCGCTTGGCG+TGG | - | chr5.4:57779518-57779537 | MS.gene26192:intron | 75.0% |
| !! | GGGGGCGCGCTTGGCGTGGT+TGG | - | chr5.4:57779522-57779541 | MS.gene26192:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 57778124 | 57782172 | 57778124 | ID=MS.gene26192 |
| chr5.4 | mRNA | 57778124 | 57782172 | 57778124 | ID=MS.gene26192.t1;Parent=MS.gene26192 |
| chr5.4 | exon | 57782018 | 57782172 | 57782018 | ID=MS.gene26192.t1.exon1;Parent=MS.gene26192.t1 |
| chr5.4 | CDS | 57782018 | 57782172 | 57782018 | ID=cds.MS.gene26192.t1;Parent=MS.gene26192.t1 |
| chr5.4 | exon | 57781692 | 57781842 | 57781692 | ID=MS.gene26192.t1.exon2;Parent=MS.gene26192.t1 |
| chr5.4 | CDS | 57781692 | 57781842 | 57781692 | ID=cds.MS.gene26192.t1;Parent=MS.gene26192.t1 |
| chr5.4 | exon | 57779796 | 57779927 | 57779796 | ID=MS.gene26192.t1.exon3;Parent=MS.gene26192.t1 |
| chr5.4 | CDS | 57779796 | 57779927 | 57779796 | ID=cds.MS.gene26192.t1;Parent=MS.gene26192.t1 |
| chr5.4 | exon | 57779525 | 57779665 | 57779525 | ID=MS.gene26192.t1.exon4;Parent=MS.gene26192.t1 |
| chr5.4 | CDS | 57779525 | 57779665 | 57779525 | ID=cds.MS.gene26192.t1;Parent=MS.gene26192.t1 |
| chr5.4 | exon | 57779039 | 57779302 | 57779039 | ID=MS.gene26192.t1.exon5;Parent=MS.gene26192.t1 |
| chr5.4 | CDS | 57779039 | 57779302 | 57779039 | ID=cds.MS.gene26192.t1;Parent=MS.gene26192.t1 |
| chr5.4 | exon | 57778124 | 57778747 | 57778124 | ID=MS.gene26192.t1.exon6;Parent=MS.gene26192.t1 |
| chr5.4 | CDS | 57778124 | 57778747 | 57778124 | ID=cds.MS.gene26192.t1;Parent=MS.gene26192.t1 |
| Gene Sequence |
| Protein sequence |
