Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26312.t1 | PNX89523.1 | 40 | 95 | 56 | 1 | 7 | 101 | 2 | 95 | 6.20E-08 | 68.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26312.t1 | A0A2K3MFE8 | 40.0 | 95 | 56 | 1 | 7 | 101 | 2 | 95 | 4.5e-08 | 68.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26312.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAAATAATAATTGA+TGG | + | 37906:40525-40544 | MS.gene26312:intron | 10.0% |
| !! | ACTAAAAAATAATAATTGAT+GGG | + | 37906:40526-40545 | MS.gene26312:intron | 10.0% |
| !! | TATTTAAGAAGAAAAAAAAA+CGG | - | 37906:39587-39606 | None:intergenic | 10.0% |
| !!! | TATATTATTATTTTAGTTGT+TGG | - | 37906:40217-40236 | None:intergenic | 10.0% |
| !!! | TTTTTATAAAAAAAATCGAT+AGG | + | 37906:40453-40472 | MS.gene26312:intron | 10.0% |
| !! | AAAATAACTCACAATATTAA+CGG | - | 37906:40437-40456 | None:intergenic | 15.0% |
| !! | AAAATTTGCAATACATTTAT+AGG | + | 37906:39905-39924 | MS.gene26312:intron | 15.0% |
| !! | AAATTTGCAATACATTTATA+GGG | + | 37906:39906-39925 | MS.gene26312:intron | 15.0% |
| !! | ATAAGAAATTGCAAAAAATT+TGG | + | 37906:40943-40962 | MS.gene26312:intron | 15.0% |
| !! | GGTATTTAATTAGATTAAAT+CGG | + | 37906:40168-40187 | MS.gene26312:intron | 15.0% |
| !! | TAAGAAATTGCAAAAAATTT+GGG | + | 37906:40944-40963 | MS.gene26312:intron | 15.0% |
| !! | TGTTAAGATTAAATTTGTAT+AGG | + | 37906:40147-40166 | MS.gene26312:intron | 15.0% |
| !!! | GAATATATTAAGCAAATTTT+TGG | - | 37906:40598-40617 | None:intergenic | 15.0% |
| !!! | TTATAGATTTTCAATACTTT+TGG | + | 37906:41131-41150 | MS.gene26312:intron | 15.0% |
| !! | AAAAAAAAAAAGAGAAGAAC+CGG | + | 37906:40749-40768 | MS.gene26312:intron | 20.0% |
| !! | AATTTGCAATACATTTATAG+GGG | + | 37906:39907-39926 | MS.gene26312:intron | 20.0% |
| !! | CTTTATACAGTTATTTATTG+TGG | + | 37906:42053-42072 | MS.gene26312:intron | 20.0% |
| !! | GGTTTATATAAGAAATTCAA+GGG | + | 37906:39990-40009 | MS.gene26312:intron | 20.0% |
| !! | GTCTATTAAATTATGTTTGT+TGG | - | 37906:40290-40309 | None:intergenic | 20.0% |
| !! | GTTTATATAAGAAATTCAAG+GGG | + | 37906:39991-40010 | MS.gene26312:intron | 20.0% |
| !! | TAATTATAACCATTGTTCTA+AGG | - | 37906:41003-41022 | None:intergenic | 20.0% |
| !! | TATATAAACCCCTATAAATT+GGG | - | 37906:39980-39999 | None:intergenic | 20.0% |
| !! | TATTGAAAATCTATAAGCAA+AGG | - | 37906:41127-41146 | None:intergenic | 20.0% |
| !! | TTAACGTTTAATACTTTACA+AGG | - | 37906:40485-40504 | None:intergenic | 20.0% |
| !! | TTATATAAACCCCTATAAAT+TGG | - | 37906:39981-40000 | None:intergenic | 20.0% |
| !!! | TATTAAACGTTAATTTTGTG+AGG | + | 37906:40492-40511 | MS.gene26312:intron | 20.0% |
| !!! | TTTACCATAGTTTTAAAACT+CGG | + | 37906:40015-40034 | MS.gene26312:intron | 20.0% |
| ! | AAAGAAATTGCCCAATTTAT+AGG | + | 37906:39967-39986 | MS.gene26312:intron | 25.0% |
| ! | AAGAAATTGCCCAATTTATA+GGG | + | 37906:39968-39987 | MS.gene26312:intron | 25.0% |
| ! | ACACAACAAAATACAAAGAA+TGG | - | 37906:39842-39861 | None:intergenic | 25.0% |
| ! | ATAAATAACTGTATAAAGCG+TGG | - | 37906:42051-42070 | None:intergenic | 25.0% |
| ! | GGGTTTATATAAGAAATTCA+AGG | + | 37906:39989-40008 | MS.gene26312:intron | 25.0% |
| ! | GTGTATGAGAAACAAAATTA+TGG | - | 37906:39817-39836 | None:intergenic | 25.0% |
| ! | TACAGTTATTTATTGTGGTT+TGG | + | 37906:42058-42077 | MS.gene26312:intron | 25.0% |
| ! | TATTAAGTGGAATGAAAAAC+CGG | + | 37906:42227-42246 | MS.gene26312:CDS | 25.0% |
| ! | TTGTAGATTCCCTTAAAAAA+GGG | + | 37906:39744-39763 | MS.gene26312:intron | 25.0% |
| !!! | TATTTTTACGAACGTTTCAA+AGG | + | 37906:41212-41231 | MS.gene26312:CDS | 25.0% |
| !!! | TTAGGAAGTTGTTTCTTATT+GGG | + | 37906:40663-40682 | MS.gene26312:intron | 25.0% |
| AAACGTTCGTAAAAATACCA+TGG | - | 37906:41209-41228 | None:intergenic | 30.0% | |
| AAATTGCAAAAAATTTGGGC+CGG | + | 37906:40948-40967 | MS.gene26312:intron | 30.0% | |
| AACGTTCGTAAAAATACCAT+GGG | - | 37906:41208-41227 | None:intergenic | 30.0% | |
| AGAAATTGCCCAATTTATAG+GGG | + | 37906:39969-39988 | MS.gene26312:intron | 30.0% | |
| AGTATCCAATCGATATTAAG+TGG | + | 37906:42214-42233 | MS.gene26312:CDS | 30.0% | |
| CATCATTAATTGGATTTGAC+GGG | - | 37906:41703-41722 | None:intergenic | 30.0% | |
| CCTTCAAAAAAGAGAAAAAC+TGG | - | 37906:41026-41045 | None:intergenic | 30.0% | |
| GCATCATTAATTGGATTTGA+CGG | - | 37906:41704-41723 | None:intergenic | 30.0% | |
| GTTGTAGATTCCCTTAAAAA+AGG | + | 37906:39743-39762 | MS.gene26312:intron | 30.0% | |
| TAGATTAAATCGGATTGAAC+CGG | + | 37906:40178-40197 | MS.gene26312:intron | 30.0% | |
| TCATTCCACTTAATATCGAT+TGG | - | 37906:42222-42241 | None:intergenic | 30.0% | |
| TGTTTGTATTCTGTAGCTTA+CGG | + | 37906:41175-41194 | MS.gene26312:intron | 30.0% | |
| TTACAAAAAATGCCACAGAT+GGG | - | 37906:40707-40726 | None:intergenic | 30.0% | |
| ! | CAGCAGCATTAATTTGAAAT+TGG | - | 37906:41583-41602 | None:intergenic | 30.0% |
| ! | TAATATCGATTGGATACTCA+CGG | - | 37906:42212-42231 | None:intergenic | 30.0% |
| ! | TTTCGATATTGGTGATAATG+AGG | + | 37906:41874-41893 | MS.gene26312:CDS | 30.0% |
| !! | GTTAGGAAGTTGTTTCTTAT+TGG | + | 37906:40662-40681 | MS.gene26312:intron | 30.0% |
| !!! | AATCCCATAGTTTTGAAACT+CGG | - | 37906:40920-40939 | None:intergenic | 30.0% |
| !!! | ATTGCAAATTTTTTTTCGCC+CGG | - | 37906:39897-39916 | None:intergenic | 30.0% |
| !!! | CCAGTTTTTCTCTTTTTTGA+AGG | + | 37906:41023-41042 | MS.gene26312:intron | 30.0% |
| !!! | TTTTTTTTACCCTGCATATG+CGG | - | 37906:39791-39810 | None:intergenic | 30.0% |
| AAAACCGGATAAAGCTACAT+CGG | + | 37906:42242-42261 | MS.gene26312:CDS | 35.0% | |
| AAAATCTATAAGCAAAGGCG+AGG | - | 37906:41122-41141 | None:intergenic | 35.0% | |
| AAAATGAACAAGCACTTCAG+TGG | + | 37906:40640-40659 | MS.gene26312:intron | 35.0% | |
| AAATAAATCAGCAGCAGCAA+CGG | - | 37906:41648-41667 | None:intergenic | 35.0% | |
| AAATCTATAAGCAAAGGCGA+GGG | - | 37906:41121-41140 | None:intergenic | 35.0% | |
| AATCGTAGGTTTAGACCTAA+TGG | - | 37906:41365-41384 | None:intergenic | 35.0% | |
| AATTAATGCTGCTGCTATTG+TGG | + | 37906:41589-41608 | MS.gene26312:intron | 35.0% | |
| AGGTAACTAATCGTCAATTG+AGG | + | 37906:41441-41460 | MS.gene26312:CDS | 35.0% | |
| ATATCACCATCATCAGGAAT+GGG | - | 37906:41740-41759 | None:intergenic | 35.0% | |
| ATTAATGCTGCTGCTATTGT+GGG | + | 37906:41590-41609 | MS.gene26312:intron | 35.0% | |
| GATCATTATGAGCAACCATT+AGG | + | 37906:41347-41366 | MS.gene26312:CDS | 35.0% | |
| GGAATCTACAACTACAACAT+TGG | - | 37906:39735-39754 | None:intergenic | 35.0% | |
| GTCAAATAGAGCATAGAGTT+TGG | + | 37906:41234-41253 | MS.gene26312:CDS | 35.0% | |
| GTTACAAAAAATGCCACAGA+TGG | - | 37906:40708-40727 | None:intergenic | 35.0% | |
| TAAAACATGTGTCTCCAACT+GGG | - | 37906:41957-41976 | None:intergenic | 35.0% | |
| TTAAAACATGTGTCTCCAAC+TGG | - | 37906:41958-41977 | None:intergenic | 35.0% | |
| TTATCACCAATATCGAAAGC+AGG | - | 37906:41872-41891 | None:intergenic | 35.0% | |
| ! | AAGCTACATCGGTATTTTTC+AGG | + | 37906:42253-42272 | MS.gene26312:CDS | 35.0% |
| ! | AGCATCGCATTTTGAATCAT+TGG | - | 37906:39433-39452 | None:intergenic | 35.0% |
| ! | AGCTACATCGGTATTTTTCA+GGG | + | 37906:42254-42273 | MS.gene26312:CDS | 35.0% |
| ! | CAAAGTATCTAAATGTACGC+AGG | - | 37906:41505-41524 | None:intergenic | 35.0% |
| ! | TCTAGGTTTGGAGTATGTTA+CGG | + | 37906:41275-41294 | MS.gene26312:CDS | 35.0% |
| ! | TTGTACCAGCAAAATTTGCT+CGG | + | 37906:42133-42152 | MS.gene26312:CDS | 35.0% |
| !! | AATACCGATGTAGCTTTATC+CGG | - | 37906:42249-42268 | None:intergenic | 35.0% |
| !! | GAAGTTGTTTCTTATTGGGT+GGG | + | 37906:40667-40686 | MS.gene26312:intron | 35.0% |
| !! | GTATTTTGTTGTGTTGTGAG+TGG | + | 37906:39848-39867 | MS.gene26312:intron | 35.0% |
| !! | TAATTTCTGGGATGATGATG+AGG | + | 37906:41844-41863 | MS.gene26312:CDS | 35.0% |
| !!! | CATAGTTTTAAAACTCGGCT+CGG | + | 37906:40020-40039 | MS.gene26312:intron | 35.0% |
| !!! | TTGCAAATTTTTTTTCGCCC+GGG | - | 37906:39896-39915 | None:intergenic | 35.0% |
| !!! | TTTTTTTACCCTGCATATGC+GGG | - | 37906:39790-39809 | None:intergenic | 35.0% |
| AAAACATGTGTCTCCAACTG+GGG | - | 37906:41956-41975 | None:intergenic | 40.0% | |
| AAACATCCCGTTATCGTCAT+AGG | - | 37906:41390-41409 | None:intergenic | 40.0% | |
| AATGCAACATCCACCAGATA+TGG | - | 37906:39502-39521 | None:intergenic | 40.0% | |
| ACTACCATATCACCATCATC+AGG | - | 37906:41746-41765 | None:intergenic | 40.0% | |
| AGAGAGAACAGATTTGTGGA+AGG | + | 37906:42297-42316 | MS.gene26312:CDS | 40.0% | |
| ATTCACTCTTGACATGGATG+AGG | + | 37906:41421-41440 | MS.gene26312:CDS | 40.0% | |
| CATATCACCATCATCAGGAA+TGG | - | 37906:41741-41760 | None:intergenic | 40.0% | |
| CGATTGACCTATGACGATAA+CGG | + | 37906:41380-41399 | MS.gene26312:CDS | 40.0% | |
| CGGTCAAACTCGGTAAAAAT+CGG | - | 37906:40800-40819 | None:intergenic | 40.0% | |
| CGTTAGAGAGAACAGATTTG+TGG | + | 37906:42293-42312 | MS.gene26312:CDS | 40.0% | |
| GAGCCGAGTTTCAAAACTAT+GGG | + | 37906:40914-40933 | MS.gene26312:intron | 40.0% | |
| GAGTTGTGCGCATCATTAAT+TGG | - | 37906:41713-41732 | None:intergenic | 40.0% | |
| GATTGACCTATGACGATAAC+GGG | + | 37906:41381-41400 | MS.gene26312:CDS | 40.0% | |
| GTATGTTACGGAGAGATCAA+TGG | + | 37906:41287-41306 | MS.gene26312:CDS | 40.0% | |
| GTTGCTCATAATGATCAAGC+AGG | - | 37906:41343-41362 | None:intergenic | 40.0% | |
| TATCGTCATAGGTCAATCGT+AGG | - | 37906:41379-41398 | None:intergenic | 40.0% | |
| TATGGATGTCGAAATGGATG+TGG | + | 37906:41904-41923 | MS.gene26312:CDS | 40.0% | |
| TCAGAACGTGGCTAATTTCT+GGG | + | 37906:41832-41851 | MS.gene26312:CDS | 40.0% | |
| TCATCCATGTCAAGAGTGAA+TGG | - | 37906:41422-41441 | None:intergenic | 40.0% | |
| TTCAGAACGTGGCTAATTTC+TGG | + | 37906:41831-41850 | MS.gene26312:CDS | 40.0% | |
| TTTATTTCCAGCAGTTCCAC+CGG | + | 37906:41661-41680 | MS.gene26312:intron | 40.0% | |
| ! | AATTAGCCACGTTCTGAATC+TGG | - | 37906:41829-41848 | None:intergenic | 40.0% |
| ! | ACCAGATATGGAAGTGTATC+GGG | - | 37906:39490-39509 | None:intergenic | 40.0% |
| ! | AGAGCATAGAGTTTGGTTTC+AGG | + | 37906:41241-41260 | MS.gene26312:CDS | 40.0% |
| ! | ATTAGCCACGTTCTGAATCT+GGG | - | 37906:41828-41847 | None:intergenic | 40.0% |
| ! | CACCAGATATGGAAGTGTAT+CGG | - | 37906:39491-39510 | None:intergenic | 40.0% |
| ! | CCATGATTTTTATGAAGCCC+GGG | + | 37906:39876-39895 | MS.gene26312:intron | 40.0% |
| ! | CGATATTGGTGATAATGAGG+AGG | + | 37906:41877-41896 | MS.gene26312:CDS | 40.0% |
| ! | CGATTTTTACCGAGTTTGAC+CGG | + | 37906:40798-40817 | MS.gene26312:intron | 40.0% |
| ! | GCCATGATTTTTATGAAGCC+CGG | + | 37906:39875-39894 | MS.gene26312:intron | 40.0% |
| ! | TGATAATGAGGAGGCTGATA+TGG | + | 37906:41886-41905 | MS.gene26312:CDS | 40.0% |
| ! | TTTGGTTTCAGGATACCAGA+GGG | + | 37906:41252-41271 | MS.gene26312:CDS | 40.0% |
| !! | ATAACCATTGTTCTAAGGCC+CGG | - | 37906:40998-41017 | None:intergenic | 40.0% |
| !! | CATTCCTGATGATGGTGATA+TGG | + | 37906:41739-41758 | MS.gene26312:CDS | 40.0% |
| !! | GATGACTCGGTTAGATAACT+CGG | + | 37906:40124-40143 | MS.gene26312:intron | 40.0% |
| !! | GCTACATCGGTATTTTTCAG+GGG | + | 37906:42255-42274 | MS.gene26312:CDS | 40.0% |
| !! | GGAAGTTGTTTCTTATTGGG+TGG | + | 37906:40666-40685 | MS.gene26312:intron | 40.0% |
| !! | TGCATGCATTGATTCATCAG+TGG | + | 37906:39521-39540 | MS.gene26312:intron | 40.0% |
| !! | TTTTGTTGTGTTGTGAGTGG+CGG | + | 37906:39851-39870 | MS.gene26312:intron | 40.0% |
| !!! | CGAGCCGAGTTTTAAAACTA+TGG | - | 37906:40022-40041 | None:intergenic | 40.0% |
| AATGGATGTGGTAGATGCTG+AGG | + | 37906:41916-41935 | MS.gene26312:CDS | 45.0% | |
| ACAAGTTCAACTCCCATCTG+TGG | + | 37906:40692-40711 | MS.gene26312:intron | 45.0% | |
| AGACGAAGACGAAGATGAGT+CGG | - | 37906:41531-41550 | None:intergenic | 45.0% | |
| AGTCATCCGATTCTGTCATG+CGG | - | 37906:40111-40130 | None:intergenic | 45.0% | |
| CATGACAGAATCGGATGACT+CGG | + | 37906:40111-40130 | MS.gene26312:intron | 45.0% | |
| CATGGTGAAATGCAGCAACA+TGG | + | 37906:41991-42010 | MS.gene26312:CDS | 45.0% | |
| CCCGGGCTTCATAAAAATCA+TGG | - | 37906:39879-39898 | None:intergenic | 45.0% | |
| CGAGCCGAGTTTCAAAACTA+TGG | + | 37906:40913-40932 | MS.gene26312:intron | 45.0% | |
| CGATACACTTCCATATCTGG+TGG | + | 37906:39489-39508 | MS.gene26312:intron | 45.0% | |
| CGATGTTGAATACCCTCCTT+TGG | - | 37906:39369-39388 | None:intergenic | 45.0% | |
| CTCGGTAAAAATCGGTGACT+CGG | - | 37906:40792-40811 | None:intergenic | 45.0% | |
| GAACAAGCACTTCAGTGGTT+AGG | + | 37906:40645-40664 | MS.gene26312:intron | 45.0% | |
| GAGGAACCTGCTTTCGATAT+TGG | + | 37906:41863-41882 | MS.gene26312:CDS | 45.0% | |
| GCTTCCATTCACTCTTGACA+TGG | + | 37906:41415-41434 | MS.gene26312:CDS | 45.0% | |
| GGAACTATGACCATAGCTCA+AGG | + | 37906:41462-41481 | MS.gene26312:CDS | 45.0% | |
| GGCTGATATGGATGTCGAAA+TGG | + | 37906:41898-41917 | MS.gene26312:CDS | 45.0% | |
| GTTGAACCGCATGACAGAAT+CGG | + | 37906:40102-40121 | MS.gene26312:intron | 45.0% | |
| TCCCGATACACTTCCATATC+TGG | + | 37906:39486-39505 | MS.gene26312:intron | 45.0% | |
| TCCCTTAAAAAAGGGCAACC+CGG | + | 37906:39752-39771 | MS.gene26312:intron | 45.0% | |
| TCGTCTTCGTCATCTGATGA+TGG | + | 37906:41557-41576 | MS.gene26312:intron | 45.0% | |
| TGACATGCAACCTTGAGCTA+TGG | - | 37906:41475-41494 | None:intergenic | 45.0% | |
| TGGTTGAACCATCAGGTCAT+TGG | + | 37906:40080-40099 | MS.gene26312:intron | 45.0% | |
| TGTTACGGAGAGATCAATGG+CGG | + | 37906:41290-41309 | MS.gene26312:CDS | 45.0% | |
| TGTTGGAGTAATCGAGTCAC+CGG | - | 37906:40200-40219 | None:intergenic | 45.0% | |
| TTATTTCCAGCAGTTCCACC+GGG | + | 37906:41662-41681 | MS.gene26312:intron | 45.0% | |
| ! | AAATTTGCTCGGCGAGCATT+TGG | + | 37906:42144-42163 | MS.gene26312:CDS | 45.0% |
| ! | AACCGGTTCAACCCATAACT+CGG | + | 37906:40766-40785 | MS.gene26312:intron | 45.0% |
| ! | AATTTGCTCGGCGAGCATTT+GGG | + | 37906:42145-42164 | MS.gene26312:CDS | 45.0% |
| ! | ACAGATTTGTGGAAGGCACA+AGG | + | 37906:42304-42323 | MS.gene26312:CDS | 45.0% |
| ! | CAGATTTGTGGAAGGCACAA+GGG | + | 37906:42305-42324 | MS.gene26312:CDS | 45.0% |
| ! | GAAGATTAGAGCACCATACC+TGG | - | 37906:39405-39424 | None:intergenic | 45.0% |
| ! | GGATTTTGTTCTTCCACCAC+TGG | - | 37906:41785-41804 | None:intergenic | 45.0% |
| ! | GTTTGGTTTCAGGATACCAG+AGG | + | 37906:41251-41270 | MS.gene26312:CDS | 45.0% |
| ! | TAGAGCACCATACCTGGTTT+GGG | - | 37906:39399-39418 | None:intergenic | 45.0% |
| ! | TATCGATTGGATACTCACGG+TGG | - | 37906:42209-42228 | None:intergenic | 45.0% |
| ! | TTAGAGCACCATACCTGGTT+TGG | - | 37906:39400-39419 | None:intergenic | 45.0% |
| ! | TTTAACGCTTGCTGCGTACA+TGG | + | 37906:41973-41992 | MS.gene26312:CDS | 45.0% |
| !! | AAGGAGGGTATTCAACATCG+CGG | + | 37906:39369-39388 | MS.gene26312:CDS | 45.0% |
| !! | GTTGCTGTTGGTGGTGATAA+TGG | + | 37906:41620-41639 | MS.gene26312:intron | 45.0% |
| !!! | ACATCGGTATTTTTCAGGGG+CGG | + | 37906:42258-42277 | MS.gene26312:CDS | 45.0% |
| !!! | ACCGGGTTGCCCTTTTTTAA+GGG | - | 37906:39756-39775 | None:intergenic | 45.0% |
| !!! | TTTTGAAACTCGGCTCGAAC+CGG | - | 37906:40910-40929 | None:intergenic | 45.0% |
| !!! | TTATAATTATATTTTTGTTA+GGG | + | 37906:40378-40397 | MS.gene26312:intron | 5.0% |
| !!! | TTTATAATTATATTTTTGTT+AGG | + | 37906:40377-40396 | MS.gene26312:intron | 5.0% |
| AAAAAATTTGGGCCGGAGCC+CGG | + | 37906:40955-40974 | MS.gene26312:intron | 50.0% | |
| ACTCACGGTGGAACTCATCT+CGG | - | 37906:42197-42216 | None:intergenic | 50.0% | |
| AGTAGCCCAGATTCAGAACG+TGG | + | 37906:41820-41839 | MS.gene26312:CDS | 50.0% | |
| CGGTTCAACCAATGACCTGA+TGG | - | 37906:40091-40110 | None:intergenic | 50.0% | |
| CTCATCTCGGATCGTGATGA+AGG | - | 37906:42184-42203 | None:intergenic | 50.0% | |
| GAGTCGATGGTTGAACCATC+AGG | + | 37906:40073-40092 | MS.gene26312:intron | 50.0% | |
| GATACCAGAGGGTCTAGGTT+TGG | + | 37906:41263-41282 | MS.gene26312:CDS | 50.0% | |
| GTAGATGCTGAGGATGCACA+TGG | + | 37906:41926-41945 | MS.gene26312:CDS | 50.0% | |
| GTTCGAGCATACCTTCGGAT+CGG | - | 37906:40847-40866 | None:intergenic | 50.0% | |
| GTTCTTCCACCACTGGTACT+GGG | - | 37906:41778-41797 | None:intergenic | 50.0% | |
| TACTCCAAACCTAGACCCTC+TGG | - | 37906:41270-41289 | None:intergenic | 50.0% | |
| TCACCATCATCAGGAATGGG+AGG | - | 37906:41737-41756 | None:intergenic | 50.0% | |
| TCTCCTCCCATTCCTGATGA+TGG | + | 37906:41731-41750 | MS.gene26312:CDS | 50.0% | |
| TCTCGGATCGTGATGAAGGT+TGG | - | 37906:42180-42199 | None:intergenic | 50.0% | |
| TGTTCTTCCACCACTGGTAC+TGG | - | 37906:41779-41798 | None:intergenic | 50.0% | |
| TTCAGGATACCAGAGGGTCT+AGG | + | 37906:41258-41277 | MS.gene26312:CDS | 50.0% | |
| !! | GACTGGTTCGAGCATACCTT+CGG | - | 37906:40852-40871 | None:intergenic | 50.0% |
| !!! | CACCGGGTTGCCCTTTTTTA+AGG | - | 37906:39757-39776 | None:intergenic | 50.0% |
| !!! | GGTATTTTTCAGGGGCGGTT+GGG | + | 37906:42263-42282 | MS.gene26312:CDS | 50.0% |
| !!! | GTATTTTTCAGGGGCGGTTG+GGG | + | 37906:42264-42283 | MS.gene26312:CDS | 50.0% |
| AAAAATTTGGGCCGGAGCCC+GGG | + | 37906:40956-40975 | MS.gene26312:intron | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | 37906:39778-39797 | MS.gene26312:intron | 55.0% | |
| CGGTCAACCCAAACCAGGTA+TGG | + | 37906:39389-39408 | MS.gene26312:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | 37906:39779-39798 | MS.gene26312:intron | 55.0% | |
| CTGAATCTGGGCTACTGCAG+CGG | - | 37906:41816-41835 | None:intergenic | 55.0% | |
| GCACTGAGTCACTGAGTCGA+TGG | + | 37906:40060-40079 | MS.gene26312:intron | 55.0% | |
| GCTGCTGCTATTGTGGGTTC+TGG | + | 37906:41596-41615 | MS.gene26312:intron | 55.0% | |
| GGCGGTGGTTGCTTCTATTC+AGG | + | 37906:41308-41327 | MS.gene26312:CDS | 55.0% | |
| GTTCCACCGGGTTTCGAAGT+AGG | + | 37906:41674-41693 | MS.gene26312:CDS | 55.0% | |
| TACGGAGAGATCAATGGCGG+TGG | + | 37906:41293-41312 | MS.gene26312:CDS | 55.0% | |
| TGCACATGGCAATCCCCAGT+TGG | + | 37906:41940-41959 | MS.gene26312:CDS | 55.0% | |
| TGTTCCTGACCCAGTACCAG+TGG | + | 37906:41766-41785 | MS.gene26312:CDS | 55.0% | |
| ! | GCTCGCCGAGCAAATTTTGC+TGG | - | 37906:42141-42160 | None:intergenic | 55.0% |
| ! | GGCCGAGTTATGGGTTGAAC+CGG | - | 37906:40771-40790 | None:intergenic | 55.0% |
| !! | GGTTCTGGTGTTGCTGTTGG+TGG | + | 37906:41611-41630 | MS.gene26312:intron | 55.0% |
| !! | GTGGGTTCTGGTGTTGCTGT+TGG | + | 37906:41608-41627 | MS.gene26312:intron | 55.0% |
| !!! | CGGTATTTTTCAGGGGCGGT+TGG | + | 37906:42262-42281 | MS.gene26312:CDS | 55.0% |
| AACTGTCCTGCACGTGAGGC+AGG | + | 37906:42356-42375 | MS.gene26312:CDS | 60.0% | |
| ACCCAACTGTCCTGCACGTG+AGG | + | 37906:42352-42371 | MS.gene26312:CDS | 60.0% | |
| AGCTTACGGCTCGTGTCCCA+TGG | + | 37906:41189-41208 | MS.gene26312:intron | 60.0% | |
| CAACTGCATGGCCGATCCGA+AGG | + | 37906:40833-40852 | MS.gene26312:intron | 60.0% | |
| CATCGCGGTCAACCCAAACC+AGG | + | 37906:39384-39403 | MS.gene26312:CDS | 60.0% | |
| CCACCGGGTTTCGAAGTAGG+AGG | + | 37906:41677-41696 | MS.gene26312:CDS | 60.0% | |
| CCTCCTACTTCGAAACCCGG+TGG | - | 37906:41680-41699 | None:intergenic | 60.0% | |
| CGGCGAGAACCGGTCAAACT+CGG | - | 37906:40810-40829 | None:intergenic | 60.0% | |
| CTCGCCGGGCCTTAGAACAA+TGG | + | 37906:40991-41010 | MS.gene26312:intron | 60.0% | |
| CTTCGGATCGGCCATGCAGT+TGG | - | 37906:40835-40854 | None:intergenic | 60.0% | |
| GATCGGCCATGCAGTTGGCT+CGG | - | 37906:40830-40849 | None:intergenic | 60.0% | |
| GCACGTGAGGCAGGTCGTTA+TGG | + | 37906:42365-42384 | MS.gene26312:CDS | 60.0% | |
| GCCTCACGTGCAGGACAGTT+GGG | - | 37906:42356-42375 | None:intergenic | 60.0% | |
| GCTACTGCAGCGGCAGTTTG+TGG | - | 37906:41806-41825 | None:intergenic | 60.0% | |
| GCTCGAACCAGTCTACCCAC+CGG | + | 37906:40859-40878 | MS.gene26312:intron | 60.0% | |
| GGGCCTCCTACTTCGAAACC+CGG | - | 37906:41683-41702 | None:intergenic | 60.0% | |
| TAACGACCTGCCTCACGTGC+AGG | - | 37906:42365-42384 | None:intergenic | 60.0% | |
| TCCTGACCCAGTACCAGTGG+TGG | + | 37906:41769-41788 | MS.gene26312:CDS | 60.0% | |
| TCGAAACCCGGTGGAACTGC+TGG | - | 37906:41671-41690 | None:intergenic | 60.0% | |
| TGCCTCACGTGCAGGACAGT+TGG | - | 37906:42357-42376 | None:intergenic | 60.0% | |
| TTCTCGCCGAGCCAACTGCA+TGG | + | 37906:40821-40840 | MS.gene26312:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | 37906:39774-39793 | None:intergenic | 60.0% |
| ! | CGGTGACTCGGCCGAGTTAT+GGG | - | 37906:40780-40799 | None:intergenic | 60.0% |
| ! | TCCACCACTGGTACTGGGTC+AGG | - | 37906:41773-41792 | None:intergenic | 60.0% |
| ! | TCGGTGACTCGGCCGAGTTA+TGG | - | 37906:40781-40800 | None:intergenic | 60.0% |
| !! | ACTCGGCTCGGTCATCGACT+CGG | + | 37906:40032-40051 | MS.gene26312:intron | 60.0% |
| ! | GAAACTCGGCTCGAACCGGC+CGG | - | 37906:40906-40925 | None:intergenic | 65.0% |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | 37906:39773-39792 | None:intergenic | 65.0% |
| !! | CCAGTCTACCCACCGGTTCC+CGG | + | 37906:40866-40885 | MS.gene26312:intron | 65.0% |
| !! | CTCGGTCATCGACTCGGCAG+AGG | + | 37906:40038-40057 | MS.gene26312:intron | 65.0% |
| !! | GCAGTTGGCTCGGCGAGAAC+CGG | - | 37906:40820-40839 | None:intergenic | 65.0% |
| CCGGGAACCGGTGGGTAGAC+TGG | - | 37906:40869-40888 | None:intergenic | 70.0% | |
| CCGGTTGGACCGGTCGAACC+GGG | - | 37906:40887-40906 | None:intergenic | 70.0% | |
| CGGTCGAACCGGGAACCGGT+GGG | - | 37906:40877-40896 | None:intergenic | 70.0% | |
| CTCGAACCGGCCGGTTGGAC+CGG | - | 37906:40897-40916 | None:intergenic | 70.0% | |
| GCCGGTTGGACCGGTCGAAC+CGG | - | 37906:40888-40907 | None:intergenic | 70.0% | |
| GGACCGGTCGAACCGGGAAC+CGG | - | 37906:40881-40900 | None:intergenic | 70.0% | |
| GTTCGACCGGTCCAACCGGC+CGG | + | 37906:40888-40907 | MS.gene26312:intron | 70.0% | |
| ! | CCCGGTTCGACCGGTCCAAC+CGG | + | 37906:40884-40903 | MS.gene26312:intron | 70.0% |
| !! | CCACCGGTTCCCGGTTCGAC+CGG | + | 37906:40875-40894 | MS.gene26312:intron | 70.0% |
| !! | GTTCTAAGGCCCGGCGAGCC+CGG | - | 37906:40989-41008 | None:intergenic | 70.0% |
| !! | TTCTAAGGCCCGGCGAGCCC+GGG | - | 37906:40988-41007 | None:intergenic | 70.0% |
| CCGGTCGAACCGGGAACCGG+TGG | - | 37906:40878-40897 | None:intergenic | 75.0% | |
| ! | CTCGGCTCGAACCGGCCGGT+TGG | - | 37906:40902-40921 | None:intergenic | 75.0% |
| ! | CCGGAGCCCGGGCGAGTGCC+CGG | + | 37906:40967-40986 | MS.gene26312:intron | 85.0% |
| ! | CCGGGCACTCGCCCGGGCTC+CGG | - | 37906:40970-40989 | None:intergenic | 85.0% |
| ! | CGGAGCCCGGGCGAGTGCCC+GGG | + | 37906:40968-40987 | MS.gene26312:intron | 85.0% |
| ! | GCGAGCCCGGGCACTCGCCC+GGG | - | 37906:40976-40995 | None:intergenic | 85.0% |
| ! | GGCGAGCCCGGGCACTCGCC+CGG | - | 37906:40977-40996 | None:intergenic | 85.0% |
| ! | GGCGAGTGCCCGGGCTCGCC+GGG | + | 37906:40977-40996 | MS.gene26312:intron | 85.0% |
| ! | GGGCGAGTGCCCGGGCTCGC+CGG | + | 37906:40976-40995 | MS.gene26312:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 37906 | gene | 39358 | 42392 | 39358 | ID=MS.gene26312 |
| 37906 | mRNA | 39358 | 42392 | 39358 | ID=MS.gene26312.t1;Parent=MS.gene26312 |
| 37906 | exon | 39358 | 39405 | 39358 | ID=MS.gene26312.t1.exon1;Parent=MS.gene26312.t1 |
| 37906 | CDS | 39358 | 39405 | 39358 | ID=cds.MS.gene26312.t1;Parent=MS.gene26312.t1 |
| 37906 | exon | 41191 | 41506 | 41191 | ID=MS.gene26312.t1.exon2;Parent=MS.gene26312.t1 |
| 37906 | CDS | 41191 | 41506 | 41191 | ID=cds.MS.gene26312.t1;Parent=MS.gene26312.t1 |
| 37906 | exon | 41672 | 42012 | 41672 | ID=MS.gene26312.t1.exon3;Parent=MS.gene26312.t1 |
| 37906 | CDS | 41672 | 42012 | 41672 | ID=cds.MS.gene26312.t1;Parent=MS.gene26312.t1 |
| 37906 | exon | 42132 | 42392 | 42132 | ID=MS.gene26312.t1.exon4;Parent=MS.gene26312.t1 |
| 37906 | CDS | 42132 | 42392 | 42132 | ID=cds.MS.gene26312.t1;Parent=MS.gene26312.t1 |
| Gene Sequence |
| Protein sequence |
