Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26389.t1 | RHN62346.1 | 95.9 | 319 | 12 | 1 | 1 | 319 | 1 | 318 | 2.20E-178 | 634.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26389.t1 | F4HY61 | 59.1 | 328 | 96 | 12 | 1 | 313 | 1 | 305 | 2.2e-94 | 347.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26389.t1 | A0A396I9R1 | 95.9 | 319 | 12 | 1 | 1 | 319 | 1 | 318 | 1.6e-178 | 634.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26389.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26389.t1 | MTR_4g088245 | 95.298 | 319 | 14 | 1 | 1 | 319 | 1 | 318 | 0.0 | 633 |
| MS.gene26389.t1 | MTR_8g069160 | 97.309 | 223 | 6 | 0 | 1 | 223 | 1 | 223 | 4.91e-164 | 457 |
| MS.gene26389.t1 | MTR_2g014680 | 61.231 | 325 | 92 | 8 | 1 | 314 | 1 | 302 | 1.31e-135 | 387 |
| MS.gene26389.t1 | MTR_4g078875 | 65.201 | 273 | 84 | 6 | 29 | 295 | 10 | 277 | 7.63e-122 | 351 |
| MS.gene26389.t1 | MTR_2g090735 | 66.078 | 283 | 84 | 8 | 27 | 305 | 10 | 284 | 7.71e-119 | 343 |
| MS.gene26389.t1 | MTR_8g102240 | 70.588 | 204 | 47 | 5 | 47 | 241 | 30 | 229 | 3.21e-95 | 290 |
| MS.gene26389.t1 | MTR_8g102240 | 70.588 | 204 | 47 | 5 | 47 | 241 | 30 | 229 | 3.30e-95 | 290 |
| MS.gene26389.t1 | MTR_5g053430 | 58.081 | 198 | 80 | 2 | 44 | 241 | 36 | 230 | 1.69e-75 | 238 |
| MS.gene26389.t1 | MTR_5g053430 | 58.081 | 198 | 80 | 2 | 44 | 241 | 36 | 230 | 2.94e-75 | 238 |
| MS.gene26389.t1 | MTR_1g093680 | 55.721 | 201 | 86 | 2 | 44 | 244 | 36 | 233 | 1.71e-71 | 229 |
| MS.gene26389.t1 | MTR_7g033320 | 55.978 | 184 | 74 | 3 | 47 | 227 | 36 | 215 | 1.04e-64 | 212 |
| MS.gene26389.t1 | MTR_1g093670 | 47.549 | 204 | 87 | 2 | 42 | 245 | 2 | 185 | 7.56e-54 | 179 |
| MS.gene26389.t1 | MTR_4g078895 | 65.152 | 66 | 19 | 2 | 45 | 109 | 16 | 78 | 2.85e-20 | 83.6 |
| MS.gene26389.t1 | MTR_6g084430 | 30.159 | 189 | 109 | 6 | 68 | 249 | 5 | 177 | 1.54e-15 | 76.3 |
| MS.gene26389.t1 | MTR_6g032770 | 30.698 | 215 | 105 | 10 | 68 | 267 | 18 | 203 | 1.91e-15 | 76.6 |
| MS.gene26389.t1 | MTR_6g012670 | 32.394 | 142 | 79 | 4 | 68 | 208 | 20 | 145 | 7.28e-15 | 74.3 |
| MS.gene26389.t1 | MTR_3g435150 | 30.952 | 168 | 93 | 5 | 68 | 228 | 16 | 167 | 7.49e-15 | 74.3 |
| MS.gene26389.t1 | MTR_1g008740 | 32.335 | 167 | 92 | 6 | 68 | 228 | 13 | 164 | 1.14e-14 | 73.9 |
| MS.gene26389.t1 | MTR_1g008740 | 30.769 | 182 | 104 | 7 | 68 | 242 | 27 | 193 | 1.57e-14 | 73.9 |
| MS.gene26389.t1 | MTR_2g014700 | 66.667 | 45 | 15 | 0 | 133 | 177 | 44 | 88 | 4.95e-14 | 67.4 |
| MS.gene26389.t1 | MTR_7g085260 | 34.104 | 173 | 83 | 8 | 68 | 227 | 17 | 171 | 2.10e-13 | 70.5 |
| MS.gene26389.t1 | MTR_3g109340 | 30.337 | 178 | 102 | 7 | 53 | 225 | 8 | 168 | 2.53e-13 | 70.1 |
| MS.gene26389.t1 | MTR_2g078700 | 31.579 | 171 | 90 | 7 | 68 | 228 | 23 | 176 | 1.29e-12 | 68.2 |
| MS.gene26389.t1 | MTR_2g080010 | 29.012 | 162 | 96 | 5 | 54 | 212 | 1 | 146 | 2.04e-12 | 67.4 |
| MS.gene26389.t1 | MTR_3g088110 | 31.034 | 145 | 78 | 6 | 68 | 209 | 7 | 132 | 2.46e-11 | 63.9 |
| MS.gene26389.t1 | MTR_7g005280 | 28.571 | 175 | 98 | 9 | 68 | 237 | 15 | 167 | 4.57e-11 | 62.8 |
| MS.gene26389.t1 | MTR_8g094580 | 29.861 | 144 | 83 | 5 | 68 | 210 | 7 | 133 | 6.68e-11 | 62.4 |
| MS.gene26389.t1 | MTR_4g089135 | 29.114 | 158 | 93 | 6 | 54 | 208 | 1 | 142 | 9.02e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26389.t1 | AT1G28470 | 58.967 | 329 | 97 | 12 | 1 | 314 | 1 | 306 | 1.99e-119 | 346 |
| MS.gene26389.t1 | AT4G28500 | 70.464 | 237 | 60 | 5 | 1 | 236 | 1 | 228 | 7.30e-118 | 342 |
| MS.gene26389.t1 | AT4G29230 | 70.000 | 200 | 48 | 2 | 47 | 238 | 31 | 226 | 1.17e-98 | 298 |
| MS.gene26389.t1 | AT4G29230 | 70.000 | 200 | 48 | 2 | 47 | 238 | 31 | 226 | 4.65e-98 | 298 |
| MS.gene26389.t1 | AT4G29230 | 70.000 | 200 | 47 | 2 | 47 | 238 | 31 | 225 | 2.01e-97 | 296 |
| MS.gene26389.t1 | AT5G56620 | 65.174 | 201 | 56 | 4 | 47 | 236 | 25 | 222 | 7.37e-89 | 272 |
| MS.gene26389.t1 | AT5G56620 | 65.174 | 201 | 56 | 4 | 47 | 236 | 25 | 222 | 7.72e-89 | 271 |
| MS.gene26389.t1 | AT5G56620 | 65.174 | 201 | 56 | 4 | 47 | 236 | 25 | 222 | 1.06e-88 | 271 |
| MS.gene26389.t1 | AT1G25580 | 59.140 | 186 | 67 | 4 | 47 | 232 | 39 | 215 | 1.08e-69 | 224 |
| MS.gene26389.t1 | AT5G14490 | 49.206 | 189 | 91 | 4 | 45 | 232 | 34 | 218 | 1.14e-55 | 182 |
| MS.gene26389.t1 | AT5G14490 | 49.206 | 189 | 91 | 4 | 45 | 232 | 37 | 221 | 1.46e-55 | 184 |
| MS.gene26389.t1 | AT5G14490 | 49.206 | 189 | 91 | 4 | 45 | 232 | 34 | 218 | 1.47e-55 | 184 |
| MS.gene26389.t1 | AT5G14490 | 49.206 | 189 | 91 | 4 | 45 | 232 | 37 | 221 | 2.04e-55 | 184 |
| MS.gene26389.t1 | AT3G01600 | 48.387 | 186 | 92 | 3 | 45 | 229 | 34 | 216 | 3.65e-52 | 176 |
| MS.gene26389.t1 | AT3G04060 | 32.597 | 181 | 98 | 6 | 58 | 230 | 10 | 174 | 2.17e-18 | 84.7 |
| MS.gene26389.t1 | AT5G18270 | 34.078 | 179 | 92 | 7 | 61 | 230 | 14 | 175 | 1.34e-16 | 79.7 |
| MS.gene26389.t1 | AT5G18270 | 34.078 | 179 | 92 | 7 | 61 | 230 | 14 | 175 | 2.24e-16 | 79.0 |
| MS.gene26389.t1 | AT5G07680 | 32.738 | 168 | 90 | 5 | 68 | 228 | 3 | 154 | 1.55e-15 | 76.3 |
| MS.gene26389.t1 | AT5G07680 | 32.738 | 168 | 90 | 5 | 68 | 228 | 17 | 168 | 2.02e-15 | 76.3 |
| MS.gene26389.t1 | AT3G18400 | 31.481 | 162 | 91 | 5 | 68 | 225 | 5 | 150 | 3.89e-15 | 75.1 |
| MS.gene26389.t1 | AT5G61430 | 30.952 | 168 | 93 | 5 | 68 | 228 | 16 | 167 | 1.30e-14 | 73.9 |
| MS.gene26389.t1 | AT1G33060 | 31.176 | 170 | 88 | 8 | 55 | 217 | 11 | 158 | 4.17e-13 | 70.5 |
| MS.gene26389.t1 | AT1G33060 | 31.176 | 170 | 88 | 8 | 55 | 217 | 11 | 158 | 4.24e-13 | 70.5 |
| MS.gene26389.t1 | AT1G01720 | 30.201 | 149 | 86 | 5 | 62 | 209 | 1 | 132 | 1.71e-12 | 67.4 |
| MS.gene26389.t1 | AT4G35580 | 30.667 | 150 | 85 | 6 | 61 | 207 | 2 | 135 | 3.63e-12 | 67.4 |
| MS.gene26389.t1 | AT4G35580 | 30.667 | 150 | 85 | 6 | 61 | 207 | 2 | 135 | 3.87e-12 | 67.4 |
| MS.gene26389.t1 | AT4G35580 | 30.667 | 150 | 85 | 6 | 61 | 207 | 2 | 135 | 4.82e-12 | 67.0 |
| MS.gene26389.t1 | AT1G76420 | 30.208 | 192 | 98 | 9 | 67 | 247 | 21 | 187 | 1.63e-11 | 64.7 |
| MS.gene26389.t1 | AT1G02230 | 33.108 | 148 | 76 | 6 | 69 | 210 | 4 | 134 | 2.03e-11 | 64.7 |
| MS.gene26389.t1 | AT5G14000 | 28.659 | 164 | 91 | 6 | 68 | 225 | 15 | 158 | 3.40e-11 | 62.4 |
Find 83 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCATGTTGGTCATAATT+TGG | 0.115945 | 4.4:+24738475 | MS.gene26389:CDS |
| TAACCAAGTTTGGAATAAAT+TGG | 0.141092 | 4.4:-24738511 | None:intergenic |
| TGCAGTATCCTTGATAATAT+TGG | 0.229118 | 4.4:-24738357 | None:intergenic |
| CAATGAACTACCGGGTTTAC+CGG | 0.282184 | 4.4:+24735838 | MS.gene26389:CDS |
| GGCCACATGAGGGGCAAGTT+AGG | 0.308122 | 4.4:-24735590 | None:intergenic |
| CCTGTTGTGTATGCTTTAGA+TGG | 0.308469 | 4.4:-24738053 | None:intergenic |
| GTACTTTCATTGCTAGTTCC+AGG | 0.310383 | 4.4:-24735525 | None:intergenic |
| GACCATGTTGGTCATAATTT+GGG | 0.314192 | 4.4:+24738476 | MS.gene26389:CDS |
| GATACTGCAAGTTATGAAAA+TGG | 0.315715 | 4.4:+24738371 | MS.gene26389:CDS |
| ATCAATAAGAGGATGAAGTT+TGG | 0.318163 | 4.4:-24735933 | None:intergenic |
| TCACCTTGCATAACCAAGTT+TGG | 0.330649 | 4.4:-24738521 | None:intergenic |
| GAGACAAGATGGCACAAAAC+AGG | 0.362354 | 4.4:+24738119 | MS.gene26389:CDS |
| AACCAAGTTTGGAATAAATT+GGG | 0.365436 | 4.4:-24738510 | None:intergenic |
| TCAAGAGATACTTCAGCATT+TGG | 0.367315 | 4.4:+24735886 | MS.gene26389:CDS |
| CTAGTCCTCTACACCAACTA+TGG | 0.382144 | 4.4:+24738194 | MS.gene26389:CDS |
| ATGACTCACATGATCAAGAT+AGG | 0.387971 | 4.4:+24735472 | MS.gene26389:CDS |
| GAGGAGCTTCATTATCATCT+TGG | 0.390234 | 4.4:-24738418 | None:intergenic |
| AAAATTAAAATACCTGATCT+TGG | 0.400632 | 4.4:-24735626 | None:intergenic |
| GATCTTGGAATTCAATGTTA+TGG | 0.401417 | 4.4:-24735611 | None:intergenic |
| ATCCCAATTTATTCCAAACT+TGG | 0.402709 | 4.4:+24738508 | MS.gene26389:CDS |
| ATCCATTGCCAATCGAATAA+AGG | 0.406204 | 4.4:-24738552 | None:intergenic |
| TCAATAAGAGGATGAAGTTT+GGG | 0.408567 | 4.4:-24735932 | None:intergenic |
| CACATTGTCGAGGCTGTGTC+TGG | 0.424638 | 4.4:-24738322 | None:intergenic |
| ATAACATCTACTGTTATTCC+TGG | 0.425471 | 4.4:+24735507 | MS.gene26389:CDS |
| CCGTTCTCTCCTTCAAGTGT+TGG | 0.428976 | 4.4:-24735965 | None:intergenic |
| GCAATGGATGCAAACAAAGC+TGG | 0.432392 | 4.4:+24738566 | MS.gene26389:CDS |
| TGGCTCTTCCTTTATTCGAT+TGG | 0.446932 | 4.4:+24738544 | MS.gene26389:CDS |
| TGAAGTATCTCTTGATCATT+CGG | 0.452486 | 4.4:-24735878 | None:intergenic |
| TTCCTTTATTCGATTGGCAA+TGG | 0.456787 | 4.4:+24738550 | MS.gene26389:CDS |
| TTTGGAAGCAAAGGTTCTGT+TGG | 0.466993 | 4.4:+24735904 | MS.gene26389:CDS |
| GCCACATGAGGGGCAAGTTA+GGG | 0.468972 | 4.4:-24735589 | None:intergenic |
| CCATCTAAAGCATACACAAC+AGG | 0.476509 | 4.4:+24738053 | MS.gene26389:CDS |
| TAACATTGAATTCCAAGATC+AGG | 0.478563 | 4.4:+24735614 | MS.gene26389:CDS |
| GTATTGATGCATCACCCAAT+TGG | 0.485290 | 4.4:-24738240 | None:intergenic |
| AGAAGCCAGAGAAAACCAAT+TGG | 0.487035 | 4.4:+24738225 | MS.gene26389:CDS |
| TGATAATGAAGCTCCTCCTA+TGG | 0.487564 | 4.4:+24738424 | MS.gene26389:CDS |
| GCCTTCCATAGTTGGTGTAG+AGG | 0.488969 | 4.4:-24738199 | None:intergenic |
| GGGTGGAATCAATGAACTAC+CGG | 0.491627 | 4.4:+24735829 | MS.gene26389:intron |
| TTTATTGATGGTGTTATGAA+AGG | 0.492139 | 4.4:+24738158 | MS.gene26389:CDS |
| TTCATAAATTATGACCATGT+TGG | 0.496915 | 4.4:+24738464 | MS.gene26389:CDS |
| GAGTTCATACCAACACTTGA+AGG | 0.498892 | 4.4:+24735956 | MS.gene26389:CDS |
| ACTTCAGCATTTGGAAGCAA+AGG | 0.499727 | 4.4:+24735895 | MS.gene26389:CDS |
| GCAAGTTAGGGTTCGAACTT+CGG | 0.505146 | 4.4:-24735577 | None:intergenic |
| TTCACTCCCGCCGGTAAACC+CGG | 0.515913 | 4.4:-24735848 | None:intergenic |
| TGGTGAAATAGTTGTTTCAA+AGG | 0.519548 | 4.4:+24738292 | MS.gene26389:CDS |
| AGATCAGGCACTTCTTTCAC+AGG | 0.523371 | 4.4:+24738030 | MS.gene26389:CDS |
| AATGGACTGATGATAAATCA+AGG | 0.525858 | 4.4:+24738389 | MS.gene26389:CDS |
| AAATAATTCCAATATTATCA+AGG | 0.530116 | 4.4:+24738349 | MS.gene26389:CDS |
| GGTATGAACTCATCAATAAG+AGG | 0.531878 | 4.4:-24735944 | None:intergenic |
| ATTCCAAACTTGGTTATGCA+AGG | 0.537547 | 4.4:+24738518 | MS.gene26389:CDS |
| TGACTCACATGATCAAGATA+GGG | 0.539762 | 4.4:+24735473 | MS.gene26389:CDS |
| TCTCTTCTTCATTACTACCA+AGG | 0.544705 | 4.4:-24738265 | None:intergenic |
| AGTAATGAAGAAGAGAAAGA+TGG | 0.544775 | 4.4:+24738272 | MS.gene26389:CDS |
| GAAGCCAGAGAAAACCAATT+GGG | 0.545727 | 4.4:+24738226 | MS.gene26389:CDS |
| GTTAGGGTTCGAACTTCGGT+TGG | 0.551703 | 4.4:-24735573 | None:intergenic |
| AAGGTTCAAACTGATGAAGA+AGG | 0.557893 | 4.4:+24738092 | MS.gene26389:CDS |
| TGAGAATTGTAGTAATCCAT+AGG | 0.559542 | 4.4:-24738440 | None:intergenic |
| AAGAAGGAAGTGAGACAAGA+TGG | 0.561201 | 4.4:+24738108 | MS.gene26389:CDS |
| AGGAACAAGGAAAAGAAGAA+AGG | 0.568088 | 4.4:+24738073 | MS.gene26389:CDS |
| TTCAATGTTATGGCCACATG+AGG | 0.572377 | 4.4:-24735601 | None:intergenic |
| GAACTACCGGGTTTACCGGC+GGG | 0.574315 | 4.4:+24735842 | MS.gene26389:CDS |
| CAATGGATGCAAACAAAGCT+GGG | 0.577780 | 4.4:+24738567 | MS.gene26389:CDS |
| TCCTCTACACCAACTATGGA+AGG | 0.579155 | 4.4:+24738198 | MS.gene26389:CDS |
| AACTTGGTTATGCAAGGTGA+TGG | 0.581693 | 4.4:+24738524 | MS.gene26389:CDS |
| ACACATCCAGAAAAGCTACC+AGG | 0.603148 | 4.4:+24735998 | MS.gene26389:CDS |
| CAATGTTATGGCCACATGAG+GGG | 0.604114 | 4.4:-24735599 | None:intergenic |
| ACCCTAACTTGCCCCTCATG+TGG | 0.610760 | 4.4:+24735588 | MS.gene26389:CDS |
| TCAATGTTATGGCCACATGA+GGG | 0.611845 | 4.4:-24735600 | None:intergenic |
| AGACAAGATGGCACAAAACA+GGG | 0.622480 | 4.4:+24738120 | MS.gene26389:CDS |
| CTTCTTCATTACTACCAAGG+TGG | 0.625108 | 4.4:-24738262 | None:intergenic |
| AAGCATACACAACAGGAACA+AGG | 0.626885 | 4.4:+24738060 | MS.gene26389:CDS |
| TTATTTCCACCACATTGTCG+AGG | 0.627002 | 4.4:-24738332 | None:intergenic |
| CCAACACTTGAAGGAGAGAA+CGG | 0.633139 | 4.4:+24735965 | MS.gene26389:CDS |
| GGATCAAACTTCACTCCCGC+CGG | 0.638080 | 4.4:-24735857 | None:intergenic |
| GACTCACATGATCAAGATAG+GGG | 0.642351 | 4.4:+24735474 | MS.gene26389:CDS |
| ACACAGCCTCGACAATGTGG+TGG | 0.657333 | 4.4:+24738326 | MS.gene26389:CDS |
| GAATTGTAGTAATCCATAGG+AGG | 0.664154 | 4.4:-24738437 | None:intergenic |
| CAATCGAAGAGATCATGACA+TGG | 0.666033 | 4.4:+24735445 | None:intergenic |
| TGAACTACCGGGTTTACCGG+CGG | 0.666476 | 4.4:+24735841 | MS.gene26389:CDS |
| GTGATGCATCAATACCACCT+TGG | 0.670736 | 4.4:+24738248 | MS.gene26389:CDS |
| CAGACACAGCCTCGACAATG+TGG | 0.682956 | 4.4:+24738323 | MS.gene26389:CDS |
| TTCCCAAATTATGACCAACA+TGG | 0.685630 | 4.4:-24738478 | None:intergenic |
| GGTGGAATCAATGAACTACC+GGG | 0.690700 | 4.4:+24735830 | MS.gene26389:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAACAATAAATAAAGTT+TGG | - | chr4.4:24735779-24735798 | None:intergenic | 10.0% |
| !!! | TAATATATATTTACTCTTTT+TGG | + | chr4.4:24736410-24736429 | MS.gene26389:intron | 10.0% |
| !!! | TAATTATTTTTTTTTGGATT+CGG | - | chr4.4:24737532-24737551 | None:intergenic | 10.0% |
| !!! | TTTAAAATTATATAGATAGA+TGG | + | chr4.4:24736473-24736492 | MS.gene26389:intron | 10.0% |
| !! | AAAAAAAAATACAAACACTA+AGG | - | chr4.4:24735670-24735689 | None:intergenic | 15.0% |
| !! | AAAAAAAATACAAACACTAA+GGG | - | chr4.4:24735669-24735688 | None:intergenic | 15.0% |
| !! | AAATAATTCCAATATTATCA+AGG | + | chr4.4:24738349-24738368 | MS.gene26389:CDS | 15.0% |
| !! | ATACAATGTATATATTTCAT+AGG | - | chr4.4:24736560-24736579 | None:intergenic | 15.0% |
| !! | TTGATTATATTTAACTCATA+AGG | + | chr4.4:24737016-24737035 | MS.gene26389:intron | 15.0% |
| !!! | AAAAAAATAGCTGTATTTTT+TGG | - | chr4.4:24736355-24736374 | None:intergenic | 15.0% |
| !!! | ATATACATTGTATTTTTTGA+TGG | + | chr4.4:24736567-24736586 | MS.gene26389:intron | 15.0% |
| !!! | ATGTTTTATCTAAAATTTAG+TGG | + | chr4.4:24736213-24736232 | MS.gene26389:intron | 15.0% |
| !!! | TAATACATGAACATTTTATT+TGG | - | chr4.4:24737791-24737810 | None:intergenic | 15.0% |
| !!! | TGTCTCTAATTATTTTTTTT+TGG | - | chr4.4:24737538-24737557 | None:intergenic | 15.0% |
| !!! | TTTGTATTATGTTAATTTTC+AGG | - | chr4.4:24736943-24736962 | None:intergenic | 15.0% |
| !!! | TTTTTATAACACTTTTTTGA+AGG | + | chr4.4:24736279-24736298 | MS.gene26389:intron | 15.0% |
| !! | AAAATTAAAATACCTGATCT+TGG | - | chr4.4:24735629-24735648 | None:intergenic | 20.0% |
| !! | AAAGTTTAATAACTAGAGTT+GGG | + | chr4.4:24736596-24736615 | MS.gene26389:intron | 20.0% |
| !! | AATTTATTTAATAAAGACCC+TGG | + | chr4.4:24736647-24736666 | MS.gene26389:intron | 20.0% |
| !! | ACTCTAGTTATTAAACTTTA+AGG | - | chr4.4:24736595-24736614 | None:intergenic | 20.0% |
| !! | TAAAGTTTAATAACTAGAGT+TGG | + | chr4.4:24736595-24736614 | MS.gene26389:intron | 20.0% |
| !!! | AAAGTGTAAGACATTTTTTT+TGG | - | chr4.4:24737656-24737675 | None:intergenic | 20.0% |
| !!! | ATGAAGTCATCTTTAATTTT+TGG | - | chr4.4:24737084-24737103 | None:intergenic | 20.0% |
| ! | AAAAAATTAATTGCATCTCC+AGG | - | chr4.4:24737337-24737356 | None:intergenic | 25.0% |
| ! | AACTGCACATAATTATCAAA+AGG | + | chr4.4:24737284-24737303 | MS.gene26389:intron | 25.0% |
| ! | AAGTTTAATAACTAGAGTTG+GGG | + | chr4.4:24736597-24736616 | MS.gene26389:intron | 25.0% |
| ! | ACTGCACATAATTATCAAAA+GGG | + | chr4.4:24737285-24737304 | MS.gene26389:intron | 25.0% |
| ! | ATAACACCATCAATAAAAAC+TGG | - | chr4.4:24738155-24738174 | None:intergenic | 25.0% |
| ! | GTAAAATGTTAATTAAGACC+TGG | - | chr4.4:24736019-24736038 | None:intergenic | 25.0% |
| ! | GTACACTATTCTTTAATCAT+GGG | + | chr4.4:24736901-24736920 | MS.gene26389:intron | 25.0% |
| ! | TACTTGAGTTACATAAAAAC+AGG | - | chr4.4:24737153-24737172 | None:intergenic | 25.0% |
| ! | TAGATCTAAACAAATTGGTT+CGG | + | chr4.4:24737913-24737932 | MS.gene26389:intron | 25.0% |
| ! | TAGTAGTATATGCATAAAAC+AGG | - | chr4.4:24736092-24736111 | None:intergenic | 25.0% |
| ! | TGACATGTGATTAATGTTTA+GGG | - | chr4.4:24737253-24737272 | None:intergenic | 25.0% |
| ! | TGGTAAAATATCTTATTCCA+GGG | - | chr4.4:24736667-24736686 | None:intergenic | 25.0% |
| ! | TGTACACTATTCTTTAATCA+TGG | + | chr4.4:24736900-24736919 | MS.gene26389:intron | 25.0% |
| ! | TGTTTACACAAACTTCTATT+TGG | - | chr4.4:24736978-24736997 | None:intergenic | 25.0% |
| ! | TTCATAAATTATGACCATGT+TGG | + | chr4.4:24738464-24738483 | MS.gene26389:CDS | 25.0% |
| ! | TTGACATGTGATTAATGTTT+AGG | - | chr4.4:24737254-24737273 | None:intergenic | 25.0% |
| !! | AACCAAGTTTGGAATAAATT+GGG | - | chr4.4:24738513-24738532 | None:intergenic | 25.0% |
| !! | CACATGTCCTTTTAATATTT+TGG | - | chr4.4:24737614-24737633 | None:intergenic | 25.0% |
| !! | GTTTTATGCATATACTACTA+GGG | + | chr4.4:24736092-24736111 | MS.gene26389:intron | 25.0% |
| !! | TAACCAAGTTTGGAATAAAT+TGG | - | chr4.4:24738514-24738533 | None:intergenic | 25.0% |
| !! | TAAGATATTTTACCAGTCAA+AGG | + | chr4.4:24736672-24736691 | MS.gene26389:intron | 25.0% |
| !! | TGTTTTATGCATATACTACT+AGG | + | chr4.4:24736091-24736110 | MS.gene26389:intron | 25.0% |
| !!! | AGTCATCTTTAATTTTTGGA+AGG | - | chr4.4:24737080-24737099 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTGGATTCGGAT+CGG | - | chr4.4:24737527-24737546 | None:intergenic | 25.0% |
| !!! | GTCCTTTTAATATTTTGGAA+CGG | - | chr4.4:24737609-24737628 | None:intergenic | 25.0% |
| !!! | TAACACTTTTTTGAAGGAAA+CGG | + | chr4.4:24736285-24736304 | MS.gene26389:intron | 25.0% |
| !!! | TCCTTTTAATATTTTGGAAC+GGG | - | chr4.4:24737608-24737627 | None:intergenic | 25.0% |
| !!! | TTACTTTCTAACTTTTTCTC+TGG | + | chr4.4:24736035-24736054 | MS.gene26389:intron | 25.0% |
| !!! | TTGGTTTGTGAAATAATTAG+CGG | + | chr4.4:24736621-24736640 | MS.gene26389:intron | 25.0% |
| !!! | TTTATTGATGGTGTTATGAA+AGG | + | chr4.4:24738158-24738177 | MS.gene26389:CDS | 25.0% |
| AGTAATGAAGAAGAGAAAGA+TGG | + | chr4.4:24738272-24738291 | MS.gene26389:CDS | 30.0% | |
| AGTTTAATAACTAGAGTTGG+GGG | + | chr4.4:24736598-24736617 | MS.gene26389:intron | 30.0% | |
| ATAACATCTACTGTTATTCC+TGG | + | chr4.4:24735507-24735526 | MS.gene26389:CDS | 30.0% | |
| ATAGAGATAAAACACAGACT+CGG | + | chr4.4:24737561-24737580 | MS.gene26389:intron | 30.0% | |
| ATCAATAAGAGGATGAAGTT+TGG | - | chr4.4:24735936-24735955 | None:intergenic | 30.0% | |
| ATCCCAATTTATTCCAAACT+TGG | + | chr4.4:24738508-24738527 | MS.gene26389:CDS | 30.0% | |
| ATGAAAATAAAGCACAAGGA+AGG | + | chr4.4:24737191-24737210 | MS.gene26389:intron | 30.0% | |
| CTGGTAAAATATCTTATTCC+AGG | - | chr4.4:24736668-24736687 | None:intergenic | 30.0% | |
| GAAGAAATTAAGCAAATGAG+AGG | + | chr4.4:24736791-24736810 | MS.gene26389:intron | 30.0% | |
| GAGTAACAGATTGACATAAA+TGG | - | chr4.4:24737393-24737412 | None:intergenic | 30.0% | |
| GATACTGCAAGTTATGAAAA+TGG | + | chr4.4:24738371-24738390 | MS.gene26389:CDS | 30.0% | |
| GATCTTGGAATTCAATGTTA+TGG | - | chr4.4:24735614-24735633 | None:intergenic | 30.0% | |
| GCATTCTCAGTGATAAAATT+TGG | + | chr4.4:24736325-24736344 | MS.gene26389:intron | 30.0% | |
| GGGTTTAGATCTAAACAAAT+TGG | + | chr4.4:24737908-24737927 | MS.gene26389:intron | 30.0% | |
| TAAAAAAAGATGGACAGATC+AGG | + | chr4.4:24738015-24738034 | MS.gene26389:CDS | 30.0% | |
| TAACATTGAATTCCAAGATC+AGG | + | chr4.4:24735614-24735633 | MS.gene26389:CDS | 30.0% | |
| TCAATAAGAGGATGAAGTTT+GGG | - | chr4.4:24735935-24735954 | None:intergenic | 30.0% | |
| TGAGAATTGTAGTAATCCAT+AGG | - | chr4.4:24738443-24738462 | None:intergenic | 30.0% | |
| TGTGTGTGAATGATTGAATA+GGG | + | chr4.4:24735809-24735828 | MS.gene26389:intron | 30.0% | |
| TTGTGTGTGAATGATTGAAT+AGG | + | chr4.4:24735808-24735827 | MS.gene26389:intron | 30.0% | |
| ! | ACTAGACCAGTTTTTATTGA+TGG | + | chr4.4:24738146-24738165 | MS.gene26389:CDS | 30.0% |
| ! | ACTATTTGACAACGTGTTTT+GGG | + | chr4.4:24737810-24737829 | MS.gene26389:intron | 30.0% |
| ! | ATTTTATCACTGAGAATGCA+AGG | - | chr4.4:24736324-24736343 | None:intergenic | 30.0% |
| ! | TACTATTTGACAACGTGTTT+TGG | + | chr4.4:24737809-24737828 | MS.gene26389:intron | 30.0% |
| ! | TGAAGTATCTCTTGATCATT+CGG | - | chr4.4:24735881-24735900 | None:intergenic | 30.0% |
| ! | TGCAGTATCCTTGATAATAT+TGG | - | chr4.4:24738360-24738379 | None:intergenic | 30.0% |
| ! | TGGTGAAATAGTTGTTTCAA+AGG | + | chr4.4:24738292-24738311 | MS.gene26389:CDS | 30.0% |
| ! | TTTTATCACTGAGAATGCAA+GGG | - | chr4.4:24736323-24736342 | None:intergenic | 30.0% |
| !! | AATGGACTGATGATAAATCA+AGG | + | chr4.4:24738389-24738408 | MS.gene26389:CDS | 30.0% |
| !! | AGTCTTTTGTTATAACATGC+AGG | + | chr4.4:24737990-24738009 | MS.gene26389:intron | 30.0% |
| !! | ATCTCTTTTCCGTTTGTTTT+CGG | + | chr4.4:24737449-24737468 | MS.gene26389:intron | 30.0% |
| !!! | CCTTGTGCTTTATTTTCATT+GGG | - | chr4.4:24737190-24737209 | None:intergenic | 30.0% |
| !!! | TCCTTGTGCTTTATTTTCAT+TGG | - | chr4.4:24737191-24737210 | None:intergenic | 30.0% |
| AAGGTTCAAACTGATGAAGA+AGG | + | chr4.4:24738092-24738111 | MS.gene26389:CDS | 35.0% | |
| AGGAACAAGGAAAAGAAGAA+AGG | + | chr4.4:24738073-24738092 | MS.gene26389:CDS | 35.0% | |
| ATCCATTGCCAATCGAATAA+AGG | - | chr4.4:24738555-24738574 | None:intergenic | 35.0% | |
| ATGACTCACATGATCAAGAT+AGG | + | chr4.4:24735472-24735491 | MS.gene26389:CDS | 35.0% | |
| ATTCCAAACTTGGTTATGCA+AGG | + | chr4.4:24738518-24738537 | MS.gene26389:CDS | 35.0% | |
| CAATCCAAAAGCTTAAGTGT+CGG | - | chr4.4:24737501-24737520 | None:intergenic | 35.0% | |
| CATGCAGGTGTAAAAAAAGA+TGG | + | chr4.4:24738005-24738024 | MS.gene26389:intron | 35.0% | |
| CCCAATGAAAATAAAGCACA+AGG | + | chr4.4:24737187-24737206 | MS.gene26389:intron | 35.0% | |
| GAAAGAACTAACCAAAATCC+TGG | + | chr4.4:24737316-24737335 | MS.gene26389:intron | 35.0% | |
| GAAGGAGACAAAAATGAGAA+AGG | + | chr4.4:24737209-24737228 | MS.gene26389:intron | 35.0% | |
| GAATTGTAGTAATCCATAGG+AGG | - | chr4.4:24738440-24738459 | None:intergenic | 35.0% | |
| GACCATGTTGGTCATAATTT+GGG | + | chr4.4:24738476-24738495 | MS.gene26389:CDS | 35.0% | |
| GCCCGTTCCAAAATATTAAA+AGG | + | chr4.4:24737604-24737623 | MS.gene26389:intron | 35.0% | |
| GGTATGAACTCATCAATAAG+AGG | - | chr4.4:24735947-24735966 | None:intergenic | 35.0% | |
| TAGAGATAAAACACAGACTC+GGG | + | chr4.4:24737562-24737581 | MS.gene26389:intron | 35.0% | |
| TCAAGAGATACTTCAGCATT+TGG | + | chr4.4:24735886-24735905 | MS.gene26389:CDS | 35.0% | |
| TCTCTTCTTCATTACTACCA+AGG | - | chr4.4:24738268-24738287 | None:intergenic | 35.0% | |
| TGACCATGTTGGTCATAATT+TGG | + | chr4.4:24738475-24738494 | MS.gene26389:CDS | 35.0% | |
| TGACTCACATGATCAAGATA+GGG | + | chr4.4:24735473-24735492 | MS.gene26389:CDS | 35.0% | |
| TGAGTGTACAAAAAGTGAGT+TGG | - | chr4.4:24737969-24737988 | None:intergenic | 35.0% | |
| TTATGAGCAGAAATCGAACT+CGG | + | chr4.4:24735703-24735722 | MS.gene26389:intron | 35.0% | |
| TTCCCAAATTATGACCAACA+TGG | - | chr4.4:24738481-24738500 | None:intergenic | 35.0% | |
| TTCCTTTATTCGATTGGCAA+TGG | + | chr4.4:24738550-24738569 | MS.gene26389:CDS | 35.0% | |
| TTGGAAGGATCATCAAGAAA+AGG | - | chr4.4:24737065-24737084 | None:intergenic | 35.0% | |
| TTTATCACTGAGAATGCAAG+GGG | - | chr4.4:24736322-24736341 | None:intergenic | 35.0% | |
| ! | ATGCATGATGGTTTGGATTA+TGG | + | chr4.4:24736062-24736081 | MS.gene26389:intron | 35.0% |
| ! | GACACTTAAGCTTTTGGATT+GGG | + | chr4.4:24737500-24737519 | MS.gene26389:intron | 35.0% |
| ! | GATTGACATAAATGGCTTGT+TGG | - | chr4.4:24737385-24737404 | None:intergenic | 35.0% |
| ! | TAATTGCATCTCCAGGATTT+TGG | - | chr4.4:24737330-24737349 | None:intergenic | 35.0% |
| AACTTGGTTATGCAAGGTGA+TGG | + | chr4.4:24738524-24738543 | MS.gene26389:CDS | 40.0% | |
| AAGAAGGAAGTGAGACAAGA+TGG | + | chr4.4:24738108-24738127 | MS.gene26389:CDS | 40.0% | |
| AAGCATACACAACAGGAACA+AGG | + | chr4.4:24738060-24738079 | MS.gene26389:CDS | 40.0% | |
| ACTTCAGCATTTGGAAGCAA+AGG | + | chr4.4:24735895-24735914 | MS.gene26389:CDS | 40.0% | |
| ACTTTCAACACTCACACACA+TGG | + | chr4.4:24735734-24735753 | MS.gene26389:intron | 40.0% | |
| AGAAGCCAGAGAAAACCAAT+TGG | + | chr4.4:24738225-24738244 | MS.gene26389:CDS | 40.0% | |
| AGACAAGATGGCACAAAACA+GGG | + | chr4.4:24738120-24738139 | MS.gene26389:CDS | 40.0% | |
| CAATGGATGCAAACAAAGCT+GGG | + | chr4.4:24738567-24738586 | MS.gene26389:CDS | 40.0% | |
| CAGTCAAAGGAATAACGTCT+AGG | + | chr4.4:24736685-24736704 | MS.gene26389:intron | 40.0% | |
| CTAGACGTTATTCCTTTGAC+TGG | - | chr4.4:24736687-24736706 | None:intergenic | 40.0% | |
| CTTCTTCATTACTACCAAGG+TGG | - | chr4.4:24738265-24738284 | None:intergenic | 40.0% | |
| GAAGCCAGAGAAAACCAATT+GGG | + | chr4.4:24738226-24738245 | MS.gene26389:CDS | 40.0% | |
| GACTCACATGATCAAGATAG+GGG | + | chr4.4:24735474-24735493 | MS.gene26389:CDS | 40.0% | |
| GAGGAGCTTCATTATCATCT+TGG | - | chr4.4:24738421-24738440 | None:intergenic | 40.0% | |
| GAGTTCATACCAACACTTGA+AGG | + | chr4.4:24735956-24735975 | MS.gene26389:CDS | 40.0% | |
| GTACTTTCATTGCTAGTTCC+AGG | - | chr4.4:24735528-24735547 | None:intergenic | 40.0% | |
| GTGTGAATGATTGAATAGGG+TGG | + | chr4.4:24735812-24735831 | MS.gene26389:intron | 40.0% | |
| TAATAACTAGAGTTGGGGGT+TGG | + | chr4.4:24736602-24736621 | MS.gene26389:intron | 40.0% | |
| TCAATGTTATGGCCACATGA+GGG | - | chr4.4:24735603-24735622 | None:intergenic | 40.0% | |
| TCACCTTGCATAACCAAGTT+TGG | - | chr4.4:24738524-24738543 | None:intergenic | 40.0% | |
| TGGCTCTTCCTTTATTCGAT+TGG | + | chr4.4:24738544-24738563 | MS.gene26389:CDS | 40.0% | |
| TGGTTTGATGCATGATGGTT+TGG | + | chr4.4:24736055-24736074 | MS.gene26389:intron | 40.0% | |
| TTATTTCCACCACATTGTCG+AGG | - | chr4.4:24738335-24738354 | None:intergenic | 40.0% | |
| TTCAATGTTATGGCCACATG+AGG | - | chr4.4:24735604-24735623 | None:intergenic | 40.0% | |
| TTTGGAAGCAAAGGTTCTGT+TGG | + | chr4.4:24735904-24735923 | MS.gene26389:CDS | 40.0% | |
| ! | AAGTTTGGAGCGTAAGTGAT+TGG | - | chr4.4:24735764-24735783 | None:intergenic | 40.0% |
| ! | CCATCTAAAGCATACACAAC+AGG | + | chr4.4:24738053-24738072 | MS.gene26389:CDS | 40.0% |
| ! | CCTGTTGTGTATGCTTTAGA+TGG | - | chr4.4:24738056-24738075 | None:intergenic | 40.0% |
| ! | CGACACTTAAGCTTTTGGAT+TGG | + | chr4.4:24737499-24737518 | MS.gene26389:intron | 40.0% |
| ! | CTTCTTTTGCCTTCCATAGT+TGG | - | chr4.4:24738210-24738229 | None:intergenic | 40.0% |
| ! | GTATTGATGCATCACCCAAT+TGG | - | chr4.4:24738243-24738262 | None:intergenic | 40.0% |
| ! | TGATAATGAAGCTCCTCCTA+TGG | + | chr4.4:24738424-24738443 | MS.gene26389:CDS | 40.0% |
| ! | TTAAGACCTGGTAGCTTTTC+TGG | - | chr4.4:24736007-24736026 | None:intergenic | 40.0% |
| ! | TTCTCTGGTTTGATGCATGA+TGG | + | chr4.4:24736050-24736069 | MS.gene26389:intron | 40.0% |
| !! | AATTGGTTCGGTCTAATGTC+AGG | + | chr4.4:24737925-24737944 | MS.gene26389:intron | 40.0% |
| !! | ATTGGTTCGGTCTAATGTCA+GGG | + | chr4.4:24737926-24737945 | MS.gene26389:intron | 40.0% |
| !!! | AACGTGTTTTGGGATCATTC+TGG | + | chr4.4:24737820-24737839 | MS.gene26389:intron | 40.0% |
| !!! | ATCACCCAATTGGTTTTCTC+TGG | - | chr4.4:24738233-24738252 | None:intergenic | 40.0% |
| !!! | TTAATATTTTGGAACGGGCC+AGG | - | chr4.4:24737603-24737622 | None:intergenic | 40.0% |
| ACACATCCAGAAAAGCTACC+AGG | + | chr4.4:24735998-24736017 | MS.gene26389:CDS | 45.0% | |
| AGAAATCGAACTCGGTACTC+TGG | + | chr4.4:24735711-24735730 | MS.gene26389:intron | 45.0% | |
| AGATCAGGCACTTCTTTCAC+AGG | + | chr4.4:24738030-24738049 | MS.gene26389:CDS | 45.0% | |
| AGTGTGATCGGGTTAAGAGA+CGG | + | chr4.4:24737887-24737906 | MS.gene26389:intron | 45.0% | |
| CAATGAACTACCGGGTTTAC+CGG | + | chr4.4:24735838-24735857 | MS.gene26389:CDS | 45.0% | |
| CAATGTTATGGCCACATGAG+GGG | - | chr4.4:24735602-24735621 | None:intergenic | 45.0% | |
| CCAACACTTGAAGGAGAGAA+CGG | + | chr4.4:24735965-24735984 | MS.gene26389:CDS | 45.0% | |
| CTAGTCCTCTACACCAACTA+TGG | + | chr4.4:24738194-24738213 | MS.gene26389:CDS | 45.0% | |
| GAGACAAGATGGCACAAAAC+AGG | + | chr4.4:24738119-24738138 | MS.gene26389:CDS | 45.0% | |
| GCAAGTTAGGGTTCGAACTT+CGG | - | chr4.4:24735580-24735599 | None:intergenic | 45.0% | |
| GCAATGGATGCAAACAAAGC+TGG | + | chr4.4:24738566-24738585 | MS.gene26389:CDS | 45.0% | |
| GGGTGGAATCAATGAACTAC+CGG | + | chr4.4:24735829-24735848 | MS.gene26389:intron | 45.0% | |
| GGTGGAATCAATGAACTACC+GGG | + | chr4.4:24735830-24735849 | MS.gene26389:CDS | 45.0% | |
| GTGATGCATCAATACCACCT+TGG | + | chr4.4:24738248-24738267 | MS.gene26389:CDS | 45.0% | |
| TCCTCTACACCAACTATGGA+AGG | + | chr4.4:24738198-24738217 | MS.gene26389:CDS | 45.0% | |
| TGCATGCAAACTTGTCGAGT+TGG | - | chr4.4:24736838-24736857 | None:intergenic | 45.0% | |
| !! | TTTCCGTTTGTTTTCGGCAG+TGG | + | chr4.4:24737455-24737474 | MS.gene26389:intron | 45.0% |
| !!! | TATATATATATATTTTTTGA+AGG | + | chr4.4:24736507-24736526 | MS.gene26389:intron | 5.0% |
| ACGCCACTGCCGAAAACAAA+CGG | - | chr4.4:24737461-24737480 | None:intergenic | 50.0% | |
| AGTTGGATGTGTCCCTCACT+TGG | - | chr4.4:24737952-24737971 | None:intergenic | 50.0% | |
| CAATGCCACCACACTGAGTT+TGG | - | chr4.4:24736869-24736888 | None:intergenic | 50.0% | |
| CCGTTCTCTCCTTCAAGTGT+TGG | - | chr4.4:24735968-24735987 | None:intergenic | 50.0% | |
| CGTACCTCATCGAGTGTGAT+CGG | + | chr4.4:24737875-24737894 | MS.gene26389:intron | 50.0% | |
| CTAATGTCAGGGCCAAGTGA+GGG | + | chr4.4:24737937-24737956 | MS.gene26389:intron | 50.0% | |
| GTACCTCATCGAGTGTGATC+GGG | + | chr4.4:24737876-24737895 | MS.gene26389:intron | 50.0% | |
| GTGTGATCGGGTTAAGAGAC+GGG | + | chr4.4:24737888-24737907 | MS.gene26389:intron | 50.0% | |
| GTTAGGGTTCGAACTTCGGT+TGG | - | chr4.4:24735576-24735595 | None:intergenic | 50.0% | |
| TAACCCGATCACACTCGATG+AGG | - | chr4.4:24737882-24737901 | None:intergenic | 50.0% | |
| TCTAATGTCAGGGCCAAGTG+AGG | + | chr4.4:24737936-24737955 | MS.gene26389:intron | 50.0% | |
| TGAGTGCACCAAACTCAGTG+TGG | + | chr4.4:24736858-24736877 | MS.gene26389:intron | 50.0% | |
| TGGCGTCACAAAACCTGATC+CGG | + | chr4.4:24737475-24737494 | MS.gene26389:intron | 50.0% | |
| ! | GCCTTCCATAGTTGGTGTAG+AGG | - | chr4.4:24738202-24738221 | None:intergenic | 50.0% |
| !! | CCAAAAGCTTAAGTGTCGGC+CGG | - | chr4.4:24737497-24737516 | None:intergenic | 50.0% |
| ACACAGCCTCGACAATGTGG+TGG | + | chr4.4:24738326-24738345 | MS.gene26389:CDS | 55.0% | |
| ACAGACTCGGGTTAACCCTC+GGG | + | chr4.4:24737574-24737593 | MS.gene26389:intron | 55.0% | |
| CACAGACTCGGGTTAACCCT+CGG | + | chr4.4:24737573-24737592 | MS.gene26389:intron | 55.0% | |
| CACATTGTCGAGGCTGTGTC+TGG | - | chr4.4:24738325-24738344 | None:intergenic | 55.0% | |
| CAGACACAGCCTCGACAATG+TGG | + | chr4.4:24738323-24738342 | MS.gene26389:CDS | 55.0% | |
| GCCACATGAGGGGCAAGTTA+GGG | - | chr4.4:24735592-24735611 | None:intergenic | 55.0% | |
| GGATCAAACTTCACTCCCGC+CGG | - | chr4.4:24735860-24735879 | None:intergenic | 55.0% | |
| GTGCACCAAACTCAGTGTGG+TGG | + | chr4.4:24736861-24736880 | MS.gene26389:intron | 55.0% | |
| TGAACTACCGGGTTTACCGG+CGG | + | chr4.4:24735841-24735860 | MS.gene26389:CDS | 55.0% | |
| ! | ACCCTAACTTGCCCCTCATG+TGG | + | chr4.4:24735588-24735607 | MS.gene26389:CDS | 55.0% |
| ! | CCGGCCGACACTTAAGCTTT+TGG | + | chr4.4:24737494-24737513 | MS.gene26389:intron | 55.0% |
| GAACTACCGGGTTTACCGGC+GGG | + | chr4.4:24735842-24735861 | MS.gene26389:CDS | 60.0% | |
| GGCCACATGAGGGGCAAGTT+AGG | - | chr4.4:24735593-24735612 | None:intergenic | 60.0% | |
| GGGTTAACCCTCGGGTTACC+TGG | + | chr4.4:24737582-24737601 | MS.gene26389:intron | 60.0% | |
| TTCACTCCCGCCGGTAAACC+CGG | - | chr4.4:24735851-24735870 | None:intergenic | 60.0% | |
| !! | GCTTAAGTGTCGGCCGGATC+AGG | - | chr4.4:24737491-24737510 | None:intergenic | 60.0% |
| GAACGGGCCAGGTAACCCGA+GGG | - | chr4.4:24737592-24737611 | None:intergenic | 65.0% | |
| GGAACGGGCCAGGTAACCCG+AGG | - | chr4.4:24737593-24737612 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 24735459 | 24738604 | 24735459 | ID=MS.gene26389 |
| chr4.4 | mRNA | 24735459 | 24738604 | 24735459 | ID=MS.gene26389.t1;Parent=MS.gene26389 |
| chr4.4 | exon | 24735459 | 24735635 | 24735459 | ID=MS.gene26389.t1.exon1;Parent=MS.gene26389.t1 |
| chr4.4 | CDS | 24735459 | 24735635 | 24735459 | ID=cds.MS.gene26389.t1;Parent=MS.gene26389.t1 |
| chr4.4 | exon | 24735830 | 24736019 | 24735830 | ID=MS.gene26389.t1.exon2;Parent=MS.gene26389.t1 |
| chr4.4 | CDS | 24735830 | 24736019 | 24735830 | ID=cds.MS.gene26389.t1;Parent=MS.gene26389.t1 |
| chr4.4 | exon | 24738012 | 24738604 | 24738012 | ID=MS.gene26389.t1.exon3;Parent=MS.gene26389.t1 |
| chr4.4 | CDS | 24738012 | 24738604 | 24738012 | ID=cds.MS.gene26389.t1;Parent=MS.gene26389.t1 |
| Gene Sequence |
| Protein sequence |
