Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26413.t1 | KEH30946.1 | 76.6 | 410 | 69 | 3 | 1 | 410 | 1 | 383 | 6.80E-167 | 597 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26413.t1 | Q6X7J5 | 28.1 | 413 | 183 | 11 | 8 | 400 | 7 | 325 | 1.5e-26 | 122.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26413.t1 | A0A072UNJ4 | 76.6 | 410 | 69 | 3 | 1 | 410 | 1 | 383 | 4.9e-167 | 597.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26413.t1 | TF | HB-WOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26413.t1 | MTR_4g088070 | 77.317 | 410 | 66 | 3 | 1 | 410 | 1 | 383 | 0.0 | 605 |
| MS.gene26413.t1 | MTR_7g025010 | 57.882 | 406 | 149 | 6 | 8 | 399 | 7 | 404 | 3.01e-149 | 437 |
| MS.gene26413.t1 | MTR_4g088080 | 70.571 | 333 | 81 | 3 | 1 | 333 | 1 | 316 | 3.11e-146 | 419 |
| MS.gene26413.t1 | MTR_2g015000 | 36.180 | 445 | 193 | 16 | 8 | 403 | 7 | 409 | 2.30e-57 | 196 |
| MS.gene26413.t1 | MTR_3g462480 | 65.714 | 70 | 24 | 0 | 332 | 401 | 22 | 91 | 8.20e-26 | 100 |
| MS.gene26413.t1 | MTR_6g027390 | 63.333 | 60 | 22 | 0 | 35 | 94 | 24 | 83 | 1.23e-20 | 92.0 |
| MS.gene26413.t1 | MTR_7g086940 | 60.938 | 64 | 22 | 1 | 29 | 92 | 17 | 77 | 1.53e-18 | 85.5 |
| MS.gene26413.t1 | MTR_4g088065 | 46.903 | 113 | 45 | 4 | 52 | 163 | 134 | 232 | 5.90e-18 | 83.6 |
| MS.gene26413.t1 | MTR_4g084550 | 46.269 | 67 | 36 | 0 | 37 | 103 | 58 | 124 | 6.25e-17 | 79.0 |
| MS.gene26413.t1 | MTR_5g081990 | 37.778 | 90 | 50 | 1 | 14 | 103 | 10 | 93 | 1.89e-15 | 74.7 |
| MS.gene26413.t1 | MTR_8g107210 | 49.180 | 61 | 31 | 0 | 43 | 103 | 96 | 156 | 2.67e-15 | 77.4 |
| MS.gene26413.t1 | MTR_4g063735 | 30.508 | 177 | 91 | 3 | 43 | 189 | 25 | 199 | 9.31e-15 | 74.3 |
| MS.gene26413.t1 | MTR_1g019130 | 40.449 | 89 | 43 | 1 | 15 | 103 | 72 | 150 | 5.34e-14 | 71.6 |
| MS.gene26413.t1 | MTR_5g021930 | 41.975 | 81 | 45 | 2 | 43 | 122 | 30 | 109 | 6.96e-14 | 72.4 |
| MS.gene26413.t1 | MTR_1g019130 | 40.449 | 89 | 43 | 1 | 15 | 103 | 72 | 150 | 2.00e-13 | 70.1 |
| MS.gene26413.t1 | MTR_3g115620 | 33.010 | 103 | 62 | 1 | 41 | 143 | 80 | 175 | 4.59e-13 | 68.6 |
| MS.gene26413.t1 | MTR_7g060630 | 43.333 | 60 | 34 | 0 | 43 | 102 | 8 | 67 | 3.32e-12 | 65.9 |
| MS.gene26413.t1 | MTR_1g115315 | 41.270 | 63 | 37 | 0 | 40 | 102 | 82 | 144 | 9.78e-12 | 65.5 |
| MS.gene26413.t1 | MTR_1g115315 | 41.270 | 63 | 37 | 0 | 40 | 102 | 82 | 144 | 1.25e-11 | 65.1 |
| MS.gene26413.t1 | MTR_0777s0020 | 47.191 | 89 | 44 | 2 | 76 | 163 | 50 | 136 | 9.59e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26413.t1 | AT5G45980 | 47.244 | 127 | 51 | 2 | 9 | 119 | 8 | 134 | 5.23e-30 | 119 |
| MS.gene26413.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 7.58e-20 | 89.4 |
| MS.gene26413.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 1.24e-19 | 89.4 |
| MS.gene26413.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 1.82e-19 | 89.0 |
| MS.gene26413.t1 | AT5G17810 | 66.667 | 54 | 18 | 0 | 41 | 94 | 19 | 72 | 1.90e-19 | 88.2 |
| MS.gene26413.t1 | AT5G17810 | 66.667 | 54 | 18 | 0 | 41 | 94 | 19 | 72 | 2.09e-19 | 88.2 |
| MS.gene26413.t1 | AT5G17810 | 66.667 | 54 | 18 | 0 | 41 | 94 | 19 | 72 | 2.09e-19 | 88.2 |
| MS.gene26413.t1 | AT3G03660 | 47.872 | 94 | 39 | 2 | 1 | 94 | 1 | 84 | 2.55e-19 | 89.0 |
| MS.gene26413.t1 | AT3G18010 | 47.541 | 61 | 32 | 0 | 43 | 103 | 76 | 136 | 6.58e-15 | 76.3 |
| MS.gene26413.t1 | AT1G46480 | 47.826 | 69 | 35 | 1 | 35 | 103 | 83 | 150 | 3.17e-14 | 71.2 |
| MS.gene26413.t1 | AT5G59340 | 26.667 | 180 | 122 | 4 | 43 | 216 | 14 | 189 | 5.40e-14 | 72.0 |
| MS.gene26413.t1 | AT5G05770 | 43.333 | 60 | 34 | 0 | 43 | 102 | 29 | 88 | 7.48e-14 | 68.6 |
| MS.gene26413.t1 | AT3G11260 | 44.262 | 61 | 34 | 0 | 43 | 103 | 24 | 84 | 8.58e-14 | 70.1 |
| MS.gene26413.t1 | AT1G46480 | 47.826 | 69 | 35 | 1 | 35 | 103 | 83 | 150 | 1.42e-13 | 70.9 |
| MS.gene26413.t1 | AT2G33880 | 45.946 | 74 | 36 | 1 | 327 | 400 | 309 | 378 | 1.63e-13 | 72.0 |
| MS.gene26413.t1 | AT2G17950 | 50.000 | 62 | 30 | 1 | 43 | 103 | 38 | 99 | 1.82e-13 | 71.2 |
| MS.gene26413.t1 | AT2G33880 | 44.595 | 74 | 37 | 1 | 327 | 400 | 309 | 378 | 3.29e-13 | 71.2 |
| MS.gene26413.t1 | AT2G01500 | 49.091 | 55 | 28 | 0 | 43 | 97 | 61 | 115 | 6.70e-13 | 69.3 |
| MS.gene26413.t1 | AT2G28610 | 42.424 | 66 | 38 | 0 | 37 | 102 | 2 | 67 | 3.25e-12 | 66.6 |
| MS.gene26413.t1 | AT4G35550 | 42.857 | 63 | 36 | 0 | 41 | 103 | 97 | 159 | 3.73e-12 | 67.0 |
| MS.gene26413.t1 | AT1G20700 | 41.270 | 63 | 37 | 0 | 41 | 103 | 31 | 93 | 8.04e-12 | 63.5 |
| MS.gene26413.t1 | AT1G20700 | 36.486 | 74 | 47 | 0 | 30 | 103 | 82 | 155 | 1.06e-11 | 64.7 |
| MS.gene26413.t1 | AT1G20700 | 36.486 | 74 | 47 | 0 | 30 | 103 | 82 | 155 | 1.15e-11 | 64.3 |
Find 107 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAACAATTAGAAGAATT+TGG | 0.130042 | 4.1:+22270308 | MS.gene26413:CDS |
| CAAGACCCGCAATTTAATTT+TGG | 0.177107 | 4.1:+22270944 | MS.gene26413:CDS |
| TTAGAAGAATTTGGGAAAAT+TGG | 0.179693 | 4.1:+22270317 | MS.gene26413:CDS |
| CCATTGAGAAAGAGGAAAAT+AGG | 0.245649 | 4.1:-22270682 | None:intergenic |
| AATAAGTATCATCTTGCTTT+TGG | 0.259990 | 4.1:-22270619 | None:intergenic |
| AAAGGATTCACGAACGTTAA+AGG | 0.277504 | 4.1:-22271339 | None:intergenic |
| ATGCGGATTTGCTCAGGCTT+TGG | 0.283372 | 4.1:-22270224 | None:intergenic |
| ATGAACAATGAAAATGAAAA+TGG | 0.285973 | 4.1:+22270845 | MS.gene26413:CDS |
| CACTCTCCCATCATTAATAT+TGG | 0.292661 | 4.1:-22270564 | None:intergenic |
| GCCTGAGCAAATCCGCATTC+TGG | 0.308743 | 4.1:+22270229 | MS.gene26413:CDS |
| TGCGGATTTGCTCAGGCTTT+GGG | 0.308960 | 4.1:-22270223 | None:intergenic |
| TCAGGCTTTGGGTTCCATCT+TGG | 0.322968 | 4.1:-22270212 | None:intergenic |
| TTTCACTGGGAGAGGCTCTT+TGG | 0.326910 | 4.1:-22270514 | None:intergenic |
| GAAGTTGATCATCAGTAAAA+AGG | 0.326950 | 4.1:-22271060 | None:intergenic |
| TTTGGGTTCCATCTTGGCCT+TGG | 0.327019 | 4.1:-22270206 | None:intergenic |
| ATCACAATATCTAACAATAT+TGG | 0.329123 | 4.1:+22270536 | MS.gene26413:CDS |
| GGAGAGATTGTGGATGAATT+AGG | 0.338412 | 4.1:-22270593 | None:intergenic |
| GGTGGTGGTGGTGGGATTTG+TGG | 0.341213 | 4.1:-22270461 | None:intergenic |
| GTGGTGGTGGTGGGATTTGT+GGG | 0.343259 | 4.1:-22270460 | None:intergenic |
| GGTGAGGGTTCAATCATATT+CGG | 0.354951 | 4.1:-22270779 | None:intergenic |
| ATTTGTGGGAGAGAGTTATT+AGG | 0.358733 | 4.1:-22270446 | None:intergenic |
| GTGAACAATTAGAAGAATTT+GGG | 0.359582 | 4.1:+22270309 | MS.gene26413:CDS |
| TTCCATCTTGGCCTTGGTCC+AGG | 0.361114 | 4.1:-22270200 | None:intergenic |
| TGGTTGGAGTTCGACGAATT+TGG | 0.370437 | 4.1:-22269627 | None:intergenic |
| GATGGATTAGGTGGTGGTGG+TGG | 0.376558 | 4.1:-22270470 | None:intergenic |
| AGAGGCTCTTTGGTGATTAG+AGG | 0.377467 | 4.1:-22270504 | None:intergenic |
| TTTACTGATGATCAACTTCA+AGG | 0.378920 | 4.1:+22271064 | MS.gene26413:CDS |
| AATTAAATTGCGGGTCTTGT+TGG | 0.379122 | 4.1:-22270940 | None:intergenic |
| CTGGAAGCAATCTACAACTC+AGG | 0.386585 | 4.1:+22270248 | MS.gene26413:CDS |
| GAAGATGATGAAGATGGATT+AGG | 0.391757 | 4.1:-22270482 | None:intergenic |
| TGACACCAAAATTAAATTGC+GGG | 0.395460 | 4.1:-22270949 | None:intergenic |
| CCCCATTCATCGGTTAGAAC+CGG | 0.398111 | 4.1:-22271398 | None:intergenic |
| CCCGGTTCTAACCGATGAAT+GGG | 0.399463 | 4.1:+22271397 | MS.gene26413:CDS |
| GTTGTAGATCGGTTTCAGTT+GGG | 0.400667 | 4.1:-22270649 | None:intergenic |
| GAAAATGAAGAAAGAAATCC+TGG | 0.401206 | 4.1:+22270182 | MS.gene26413:CDS |
| CATTGAGAAAGAGGAAAATA+GGG | 0.407191 | 4.1:-22270681 | None:intergenic |
| ACGTTGCTTCTTCGTGATGA+TGG | 0.412885 | 4.1:+22273289 | MS.gene26413:CDS |
| GTGCATGTGCATCATATTCA+TGG | 0.415898 | 4.1:-22270918 | None:intergenic |
| TTAGGAGCTGGATCTGCAAT+TGG | 0.417412 | 4.1:-22270428 | None:intergenic |
| TCCAGAATGCGGATTTGCTC+AGG | 0.421812 | 4.1:-22270230 | None:intergenic |
| GTTAGATATTGTGATTTCAC+TGG | 0.434652 | 4.1:-22270528 | None:intergenic |
| TTTAACGTTCGTGAATCCTT+TGG | 0.434959 | 4.1:+22271341 | MS.gene26413:CDS |
| ATGATTCTCCATTGAGAAAG+AGG | 0.435482 | 4.1:-22270690 | None:intergenic |
| GGAATCTCCAATATTAATGA+TGG | 0.437319 | 4.1:+22270557 | MS.gene26413:CDS |
| GTGAGGGTTCAATCATATTC+GGG | 0.442014 | 4.1:-22270778 | None:intergenic |
| AAGGATTCACGAACGTTAAA+GGG | 0.443421 | 4.1:-22271338 | None:intergenic |
| ATCTTCTTGATTTCATCTAC+AGG | 0.443482 | 4.1:-22270284 | None:intergenic |
| CCCCGGTTCTAACCGATGAA+TGG | 0.455370 | 4.1:+22271396 | MS.gene26413:CDS |
| AGTTGTAGATCGGTTTCAGT+TGG | 0.468112 | 4.1:-22270650 | None:intergenic |
| CCCATTCATCGGTTAGAACC+GGG | 0.470305 | 4.1:-22271397 | None:intergenic |
| ATGGATTAGGTGGTGGTGGT+GGG | 0.472541 | 4.1:-22270469 | None:intergenic |
| ATGTCAATGGCCGGAGGTAG+AGG | 0.473475 | 4.1:-22271013 | None:intergenic |
| GGTGACTTTATAAACTTGCT+TGG | 0.474802 | 4.1:-22269606 | None:intergenic |
| ATGGAGAATCATGTTAATGA+AGG | 0.479722 | 4.1:+22270701 | MS.gene26413:CDS |
| CGTTGCTTCTTCGTGATGAT+GGG | 0.485799 | 4.1:+22273290 | MS.gene26413:CDS |
| TTGTAGATCGGTTTCAGTTG+GGG | 0.501118 | 4.1:-22270648 | None:intergenic |
| GAAGATGGATTAGGTGGTGG+TGG | 0.501572 | 4.1:-22270473 | None:intergenic |
| TATTGTGATTTCACTGGGAG+AGG | 0.511945 | 4.1:-22270522 | None:intergenic |
| CTGAACTTCAGAGGAGGATA+CGG | 0.512954 | 4.1:+22273260 | MS.gene26413:CDS |
| GGGAGAGAGTTATTAGGAGC+TGG | 0.513692 | 4.1:-22270440 | None:intergenic |
| ATCCTGGACCAAGGCCAAGA+TGG | 0.528279 | 4.1:+22270198 | MS.gene26413:CDS |
| GGTGCACTCATGTCAATGGC+CGG | 0.541661 | 4.1:-22271022 | None:intergenic |
| AGCAGGTGCACTCATGTCAA+TGG | 0.543766 | 4.1:-22271026 | None:intergenic |
| GTTAACCTCGATTACTTCGT+TGG | 0.544175 | 4.1:-22271309 | None:intergenic |
| AAAAGGAATGGAATATCAGC+AGG | 0.549420 | 4.1:-22271043 | None:intergenic |
| TCCATGGTAGAGTGAGTTGA+GGG | 0.553586 | 4.1:-22271426 | None:intergenic |
| TTCTTGATTTCATCTACAGG+TGG | 0.556034 | 4.1:-22270281 | None:intergenic |
| GAGGGTGACACCCCATTCAT+CGG | 0.558082 | 4.1:-22271408 | None:intergenic |
| TGGAGAATCATGTTAATGAA+GGG | 0.558945 | 4.1:+22270702 | MS.gene26413:CDS |
| TGATCAAGTGAATGTTCAAG+AGG | 0.560823 | 4.1:+22270892 | MS.gene26413:CDS |
| GTTTGACTCCTTCTGTACCC+CGG | 0.561060 | 4.1:+22271379 | MS.gene26413:CDS |
| TTAGAGGAAGATGATGAAGA+TGG | 0.564984 | 4.1:-22270488 | None:intergenic |
| AACCATCAAAATCGTCTGCA+TGG | 0.567329 | 4.1:+22269645 | MS.gene26413:CDS |
| GAATCTCCAATATTAATGAT+GGG | 0.575519 | 4.1:+22270558 | MS.gene26413:CDS |
| TTGCAGTTGCTGAACTTCAG+AGG | 0.580695 | 4.1:+22273251 | MS.gene26413:CDS |
| GGTTAGAACCGGGGTACAGA+AGG | 0.581477 | 4.1:-22271387 | None:intergenic |
| TTAGATATTGTGATTTCACT+GGG | 0.581998 | 4.1:-22270527 | None:intergenic |
| CTCCATGGTAGAGTGAGTTG+AGG | 0.583077 | 4.1:-22271427 | None:intergenic |
| TGATCTTGCTCCTCTACCTC+CGG | 0.584790 | 4.1:+22271003 | MS.gene26413:CDS |
| AATCCAAAATCAAATTGAGT+AGG | 0.586838 | 4.1:-22273330 | None:intergenic |
| GTGACACCAAAATTAAATTG+CGG | 0.589142 | 4.1:-22270950 | None:intergenic |
| TGGAAGCAATCTACAACTCA+GGG | 0.590445 | 4.1:+22270249 | MS.gene26413:CDS |
| ATGTTATCATAATTAAGCAC+AGG | 0.594226 | 4.1:-22270821 | None:intergenic |
| TTTCAAAACCGCAAGTCCAA+AGG | 0.599228 | 4.1:+22270362 | MS.gene26413:CDS |
| CCACGTAATAATCAGCTCCA+TGG | 0.601206 | 4.1:-22271442 | None:intergenic |
| TGTAGATTGCTTCCAGAATG+CGG | 0.605667 | 4.1:-22270241 | None:intergenic |
| AACTTCAGAGGAGGATACGG+AGG | 0.607611 | 4.1:+22273263 | MS.gene26413:CDS |
| GAAGTAATCGAGGTTAACGC+AGG | 0.607642 | 4.1:+22271314 | MS.gene26413:CDS |
| TACTGCCAACGAAGTAATCG+AGG | 0.608047 | 4.1:+22271304 | MS.gene26413:CDS |
| GGAGAATCATGTTAATGAAG+GGG | 0.615858 | 4.1:+22270703 | MS.gene26413:CDS |
| CAGAACTGCTCTATTACCAA+AGG | 0.619722 | 4.1:-22271357 | None:intergenic |
| AATGACATGACAACACTAGA+GGG | 0.631034 | 4.1:+22270734 | MS.gene26413:CDS |
| GATGATGAAGATGGATTAGG+TGG | 0.643509 | 4.1:-22270479 | None:intergenic |
| ACCCTCAACTCACTCTACCA+TGG | 0.647606 | 4.1:+22271425 | MS.gene26413:CDS |
| TAATGACATGACAACACTAG+AGG | 0.647700 | 4.1:+22270733 | MS.gene26413:CDS |
| GATGAAGATGGATTAGGTGG+TGG | 0.649565 | 4.1:-22270476 | None:intergenic |
| CTCGTAAGAAGAAAGTACAT+TGG | 0.652355 | 4.1:+22269583 | MS.gene26413:CDS |
| AAGAAAGAAATCCTGGACCA+AGG | 0.658709 | 4.1:+22270189 | MS.gene26413:CDS |
| CAGTTGCTGAACTTCAGAGG+AGG | 0.665330 | 4.1:+22273254 | MS.gene26413:CDS |
| CCATGGAGCTGATTATTACG+TGG | 0.665604 | 4.1:+22271442 | MS.gene26413:CDS |
| ACTTCAGAGGAGGATACGGA+GGG | 0.665784 | 4.1:+22273264 | MS.gene26413:CDS |
| AAGTAATCGAGGTTAACGCA+GGG | 0.673390 | 4.1:+22271315 | MS.gene26413:CDS |
| ATGACATGACAACACTAGAG+GGG | 0.676653 | 4.1:+22270735 | MS.gene26413:CDS |
| TATTAATGATGGGAGAGTGT+TGG | 0.676983 | 4.1:+22270568 | MS.gene26413:CDS |
| CCGGTTCTAACCGATGAATG+GGG | 0.682846 | 4.1:+22271398 | MS.gene26413:CDS |
| CCATTCATCGGTTAGAACCG+GGG | 0.687831 | 4.1:-22271396 | None:intergenic |
| GCACTCATGTCAATGGCCGG+AGG | 0.689498 | 4.1:-22271019 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATAATAATAAAATAA+TGG | + | chr4.1:22271896-22271915 | MS.gene26413:intron | 0.0% |
| !! | AAAAATTTACTAAAAAAAAG+AGG | + | chr4.1:22271970-22271989 | MS.gene26413:intron | 10.0% |
| !! | TAATAATAATAAAAAGTAGA+AGG | - | chr4.1:22269708-22269727 | None:intergenic | 10.0% |
| !!! | ATTTCTAAAACTATTTTTTA+TGG | - | chr4.1:22270055-22270074 | None:intergenic | 10.0% |
| !!! | CTTTTTACTAAAAAAATTAA+AGG | - | chr4.1:22271870-22271889 | None:intergenic | 10.0% |
| !!! | TTATTTTTCATATATAACTA+TGG | + | chr4.1:22272123-22272142 | MS.gene26413:intron | 10.0% |
| !!! | TTTCTAAAACTATTTTTTAT+GGG | - | chr4.1:22270054-22270073 | None:intergenic | 10.0% |
| !! | AATTACAAATATAGATGATT+TGG | + | chr4.1:22271585-22271604 | MS.gene26413:intron | 15.0% |
| !! | TATATAACTATGGATTTAAT+TGG | + | chr4.1:22272133-22272152 | MS.gene26413:intron | 15.0% |
| !! | TCCATATTACTATATTTATA+GGG | + | chr4.1:22273063-22273082 | MS.gene26413:intron | 15.0% |
| !!! | AAATAGTTGATTTTAGATTT+AGG | - | chr4.1:22269932-22269951 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAAAGCTAAGATT+AGG | - | chr4.1:22269902-22269921 | None:intergenic | 15.0% |
| !!! | TTATTTTGAAAATTACGTAT+AGG | + | chr4.1:22272217-22272236 | MS.gene26413:intron | 15.0% |
| !! | AAAAAATATTTACACCCATA+AGG | - | chr4.1:22272163-22272182 | None:intergenic | 20.0% |
| !! | AAACTAAATTCTTTCACATA+TGG | - | chr4.1:22272751-22272770 | None:intergenic | 20.0% |
| !! | ACCCTATAAATATAGTAATA+TGG | - | chr4.1:22273067-22273086 | None:intergenic | 20.0% |
| !! | ATCACAATATCTAACAATAT+TGG | + | chr4.1:22270536-22270555 | MS.gene26413:CDS | 20.0% |
| !! | ATGAACAATGAAAATGAAAA+TGG | + | chr4.1:22270845-22270864 | MS.gene26413:CDS | 20.0% |
| !! | ATTACCTAATCAAAATGATT+TGG | - | chr4.1:22271742-22271761 | None:intergenic | 20.0% |
| !! | ATTTAATTGGTATACCTTAT+GGG | + | chr4.1:22272146-22272165 | MS.gene26413:intron | 20.0% |
| !! | ATTTATGTAATTAATGATCG+TGG | + | chr4.1:22272700-22272719 | MS.gene26413:intron | 20.0% |
| !! | CAAACATTTCATCAAATATA+TGG | - | chr4.1:22272515-22272534 | None:intergenic | 20.0% |
| !! | CTCCATATTACTATATTTAT+AGG | + | chr4.1:22273062-22273081 | MS.gene26413:intron | 20.0% |
| !! | GCTTATAACAAATATTGTTT+AGG | + | chr4.1:22270155-22270174 | MS.gene26413:intron | 20.0% |
| !! | TATAACAAATATTGTTTAGG+TGG | + | chr4.1:22270158-22270177 | MS.gene26413:intron | 20.0% |
| !! | TTACCTAATCAAAATGATTT+GGG | - | chr4.1:22271741-22271760 | None:intergenic | 20.0% |
| !! | TTTATAAGGGAAAATGATTT+GGG | - | chr4.1:22271708-22271727 | None:intergenic | 20.0% |
| !! | TTTGATTAGGTAATGATATT+TGG | + | chr4.1:22271748-22271767 | MS.gene26413:intron | 20.0% |
| !!! | AACTATTTGATCTTTTCTAA+TGG | + | chr4.1:22269944-22269963 | MS.gene26413:intron | 20.0% |
| !!! | AATTAGTGTTGAAGAATTAA+TGG | - | chr4.1:22271777-22271796 | None:intergenic | 20.0% |
| !!! | CTTATTTTATTGTCAAAATG+AGG | + | chr4.1:22272929-22272948 | MS.gene26413:intron | 20.0% |
| !!! | GGGAACTTTTTTTTTTATAA+GGG | - | chr4.1:22271721-22271740 | None:intergenic | 20.0% |
| !!! | TCATAATTTTTCTTTCTTTC+CGG | - | chr4.1:22272678-22272697 | None:intergenic | 20.0% |
| !!! | TGGGAACTTTTTTTTTTATA+AGG | - | chr4.1:22271722-22271741 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTTTTCCATGTTA+GGG | + | chr4.1:22269824-22269843 | MS.gene26413:intron | 20.0% |
| !!! | TTTAGTTTTTTTTCCATGTT+AGG | + | chr4.1:22269823-22269842 | MS.gene26413:intron | 20.0% |
| !!! | TTTTATAAGGGAAAATGATT+TGG | - | chr4.1:22271709-22271728 | None:intergenic | 20.0% |
| ! | AAATAGAGAGATCAATAATG+TGG | - | chr4.1:22272060-22272079 | None:intergenic | 25.0% |
| ! | ATGTTATCATAATTAAGCAC+AGG | - | chr4.1:22270824-22270843 | None:intergenic | 25.0% |
| ! | ATTCTTTCACATATGGTAAA+TGG | - | chr4.1:22272744-22272763 | None:intergenic | 25.0% |
| ! | GAATCTCCAATATTAATGAT+GGG | + | chr4.1:22270558-22270577 | MS.gene26413:CDS | 25.0% |
| ! | GATTTAATTGGTATACCTTA+TGG | + | chr4.1:22272145-22272164 | MS.gene26413:intron | 25.0% |
| ! | GGAAAGAAAGAAAAATTATG+AGG | + | chr4.1:22272677-22272696 | MS.gene26413:intron | 25.0% |
| ! | GTGAACAATTAGAAGAATTT+GGG | + | chr4.1:22270309-22270328 | MS.gene26413:CDS | 25.0% |
| ! | TTAGAAGAATTTGGGAAAAT+TGG | + | chr4.1:22270317-22270336 | MS.gene26413:CDS | 25.0% |
| ! | TTAGATATTGTGATTTCACT+GGG | - | chr4.1:22270530-22270549 | None:intergenic | 25.0% |
| !! | AATAAGTATCATCTTGCTTT+TGG | - | chr4.1:22270622-22270641 | None:intergenic | 25.0% |
| !! | ATTTGATCTTTTCTAATGGT+CGG | + | chr4.1:22269948-22269967 | MS.gene26413:intron | 25.0% |
| !! | ATTTTATTGTCAAAATGAGG+AGG | + | chr4.1:22272932-22272951 | MS.gene26413:intron | 25.0% |
| !! | TAATTTGTACGTGTCTAATA+TGG | + | chr4.1:22271818-22271837 | MS.gene26413:intron | 25.0% |
| !! | TATAACGATTAGTTGATGTT+TGG | + | chr4.1:22271234-22271253 | MS.gene26413:intron | 25.0% |
| !!! | CATCTTTTGATCATTTTTAG+AGG | - | chr4.1:22271845-22271864 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTTTCCATGTTAG+GGG | + | chr4.1:22269825-22269844 | MS.gene26413:intron | 25.0% |
| !!! | TCGATATAATTTGTTTCGAT+TGG | - | chr4.1:22269803-22269822 | None:intergenic | 25.0% |
| AAAAAGTAGAAGGAGTTGTT+TGG | - | chr4.1:22269698-22269717 | None:intergenic | 30.0% | |
| ATCTTCTTGATTTCATCTAC+AGG | - | chr4.1:22270287-22270306 | None:intergenic | 30.0% | |
| ATGCTGATAACTCAATTGTA+AGG | - | chr4.1:22272604-22272623 | None:intergenic | 30.0% | |
| ATGGAGAATCATGTTAATGA+AGG | + | chr4.1:22270701-22270720 | MS.gene26413:CDS | 30.0% | |
| CACTTGATCAAAAAGATCAT+TGG | - | chr4.1:22270882-22270901 | None:intergenic | 30.0% | |
| CATTGAGAAAGAGGAAAATA+GGG | - | chr4.1:22270684-22270703 | None:intergenic | 30.0% | |
| CGTGAACAATTAGAAGAATT+TGG | + | chr4.1:22270308-22270327 | MS.gene26413:CDS | 30.0% | |
| CTAATATAGATCAAGTCCAA+TGG | - | chr4.1:22272001-22272020 | None:intergenic | 30.0% | |
| GAAAATGAAGAAAGAAATCC+TGG | + | chr4.1:22270182-22270201 | MS.gene26413:CDS | 30.0% | |
| GGAATCTCCAATATTAATGA+TGG | + | chr4.1:22270557-22270576 | MS.gene26413:CDS | 30.0% | |
| GTAAACTTTGCATGTTTGAT+CGG | + | chr4.1:22270133-22270152 | MS.gene26413:intron | 30.0% | |
| GTGACACCAAAATTAAATTG+CGG | - | chr4.1:22270953-22270972 | None:intergenic | 30.0% | |
| GTTAGATATTGTGATTTCAC+TGG | - | chr4.1:22270531-22270550 | None:intergenic | 30.0% | |
| TAGTAGAGATCATGTTTGTT+TGG | - | chr4.1:22269869-22269888 | None:intergenic | 30.0% | |
| TGACACCAAAATTAAATTGC+GGG | - | chr4.1:22270952-22270971 | None:intergenic | 30.0% | |
| TGATCATCAGTAAAAAGGAA+TGG | - | chr4.1:22271058-22271077 | None:intergenic | 30.0% | |
| TGGAGAATCATGTTAATGAA+GGG | + | chr4.1:22270702-22270721 | MS.gene26413:CDS | 30.0% | |
| TGTTAGCTCATTTCAACTAT+AGG | - | chr4.1:22272655-22272674 | None:intergenic | 30.0% | |
| TTAGGATTTCAATGCAAGTA+AGG | + | chr4.1:22269996-22270015 | MS.gene26413:intron | 30.0% | |
| TTGCTTGAATGTGTGAATTT+AGG | - | chr4.1:22270025-22270044 | None:intergenic | 30.0% | |
| TTTACTGATGATCAACTTCA+AGG | + | chr4.1:22271064-22271083 | MS.gene26413:CDS | 30.0% | |
| ! | AAAGAGGAAAATAGGGTTTT+AGG | - | chr4.1:22270677-22270696 | None:intergenic | 30.0% |
| ! | ACTATATACGCACAATCTTT+TGG | + | chr4.1:22272335-22272354 | MS.gene26413:intron | 30.0% |
| ! | GAAGTTGATCATCAGTAAAA+AGG | - | chr4.1:22271063-22271082 | None:intergenic | 30.0% |
| !! | AAGAATTTAGTTTGCGTGTT+AGG | + | chr4.1:22272758-22272777 | MS.gene26413:intron | 30.0% |
| !! | GTGTATTGATAGCATGTTTT+CGG | + | chr4.1:22272827-22272846 | MS.gene26413:intron | 30.0% |
| !!! | GGTTGTCTTTTTGATTTCTT+GGG | - | chr4.1:22270410-22270429 | None:intergenic | 30.0% |
| !!! | GTTCCCAAATCATTTTGATT+AGG | + | chr4.1:22271735-22271754 | MS.gene26413:intron | 30.0% |
| !!! | GTTGTCTTTTTGATTTCTTG+GGG | - | chr4.1:22270409-22270428 | None:intergenic | 30.0% |
| !!! | TGCTTTTTTGTTTTTGCCTT+TGG | - | chr4.1:22270381-22270400 | None:intergenic | 30.0% |
| !!! | TGGTTGTCTTTTTGATTTCT+TGG | - | chr4.1:22270411-22270430 | None:intergenic | 30.0% |
| !!! | TTAGTTGATGTTTGGTTTTC+AGG | + | chr4.1:22271242-22271261 | MS.gene26413:intron | 30.0% |
| !!! | TTGGTTTGTTAATGCACTTT+TGG | + | chr4.1:22272790-22272809 | MS.gene26413:intron | 30.0% |
| AAAAAAAGAGGATCCACCAT+TGG | + | chr4.1:22271982-22272001 | MS.gene26413:intron | 35.0% | |
| AAAAGGAATGGAATATCAGC+AGG | - | chr4.1:22271046-22271065 | None:intergenic | 35.0% | |
| AAAGGATTCACGAACGTTAA+AGG | - | chr4.1:22271342-22271361 | None:intergenic | 35.0% | |
| AAGGATTCACGAACGTTAAA+GGG | - | chr4.1:22271341-22271360 | None:intergenic | 35.0% | |
| AATGACATGACAACACTAGA+GGG | + | chr4.1:22270734-22270753 | MS.gene26413:CDS | 35.0% | |
| ACAATTGAGTTATCAGCATG+CGG | + | chr4.1:22272605-22272624 | MS.gene26413:intron | 35.0% | |
| ACCCAAAATTTCAAGCACAA+GGG | + | chr4.1:22271120-22271139 | MS.gene26413:intron | 35.0% | |
| ATATAGATCAAGTCCAATGG+TGG | - | chr4.1:22271998-22272017 | None:intergenic | 35.0% | |
| ATGATTCTCCATTGAGAAAG+AGG | - | chr4.1:22270693-22270712 | None:intergenic | 35.0% | |
| ATTTGTGGGAGAGAGTTATT+AGG | - | chr4.1:22270449-22270468 | None:intergenic | 35.0% | |
| CACTCTCCCATCATTAATAT+TGG | - | chr4.1:22270567-22270586 | None:intergenic | 35.0% | |
| CCATTGAGAAAGAGGAAAAT+AGG | - | chr4.1:22270685-22270704 | None:intergenic | 35.0% | |
| GATGAAATGTTTGAGAGTGA+TGG | + | chr4.1:22272522-22272541 | MS.gene26413:intron | 35.0% | |
| GGAGAATCATGTTAATGAAG+GGG | + | chr4.1:22270703-22270722 | MS.gene26413:CDS | 35.0% | |
| GGTAAATAGTGTGAAGTGAT+AGG | - | chr4.1:22272039-22272058 | None:intergenic | 35.0% | |
| TAATGACATGACAACACTAG+AGG | + | chr4.1:22270733-22270752 | MS.gene26413:CDS | 35.0% | |
| TAGTTGAAATGAGCTAACAC+CGG | + | chr4.1:22272656-22272675 | MS.gene26413:intron | 35.0% | |
| TCAAAATGAGGAGGAGATAA+TGG | + | chr4.1:22272941-22272960 | MS.gene26413:intron | 35.0% | |
| TCTTCATCGTTGTTGTATGA+AGG | - | chr4.1:22273211-22273230 | None:intergenic | 35.0% | |
| TGATCAAGTGAATGTTCAAG+AGG | + | chr4.1:22270892-22270911 | MS.gene26413:CDS | 35.0% | |
| TGTGAAGTGATAGGAAAAGA+GGG | - | chr4.1:22272030-22272049 | None:intergenic | 35.0% | |
| TGTTTATATGTCCCCTAACA+TGG | - | chr4.1:22269839-22269858 | None:intergenic | 35.0% | |
| TTACTGAACTCAATCACTTG+CGG | + | chr4.1:22273107-22273126 | MS.gene26413:intron | 35.0% | |
| TTAGAGGAAGATGATGAAGA+TGG | - | chr4.1:22270491-22270510 | None:intergenic | 35.0% | |
| TTCTTGATTTCATCTACAGG+TGG | - | chr4.1:22270284-22270303 | None:intergenic | 35.0% | |
| TTGAAGTCTATCTTGAACAG+AGG | + | chr4.1:22273151-22273170 | MS.gene26413:intron | 35.0% | |
| TTGCTTGACGGTGTAAATTT+AGG | + | chr4.1:22269978-22269997 | MS.gene26413:intron | 35.0% | |
| TTTAACGTTCGTGAATCCTT+TGG | + | chr4.1:22271341-22271360 | MS.gene26413:CDS | 35.0% | |
| TTTACACCGTCAAGCAAATA+TGG | - | chr4.1:22269975-22269994 | None:intergenic | 35.0% | |
| ! | AATTAAATTGCGGGTCTTGT+TGG | - | chr4.1:22270943-22270962 | None:intergenic | 35.0% |
| ! | ACCCTTGTGCTTGAAATTTT+GGG | - | chr4.1:22271124-22271143 | None:intergenic | 35.0% |
| ! | ATCAACATTTTGTTGAGGTG+AGG | - | chr4.1:22270798-22270817 | None:intergenic | 35.0% |
| ! | CCTATTTTCCTCTTTCTCAA+TGG | + | chr4.1:22270682-22270701 | MS.gene26413:CDS | 35.0% |
| ! | CTCGTAAGAAGAAAGTACAT+TGG | + | chr4.1:22269583-22269602 | MS.gene26413:CDS | 35.0% |
| ! | GAAGATGATGAAGATGGATT+AGG | - | chr4.1:22270485-22270504 | None:intergenic | 35.0% |
| ! | GGAAGATCAACATTTTGTTG+AGG | - | chr4.1:22270803-22270822 | None:intergenic | 35.0% |
| ! | GGTGACTTTATAAACTTGCT+TGG | - | chr4.1:22269609-22269628 | None:intergenic | 35.0% |
| ! | TACCCTTGTGCTTGAAATTT+TGG | - | chr4.1:22271125-22271144 | None:intergenic | 35.0% |
| ! | TATTAATGATGGGAGAGTGT+TGG | + | chr4.1:22270568-22270587 | MS.gene26413:CDS | 35.0% |
| ! | TCAACATTTTGTTGAGGTGA+GGG | - | chr4.1:22270797-22270816 | None:intergenic | 35.0% |
| ! | TGTTTTCGGCTTTCAAAATG+TGG | + | chr4.1:22272841-22272860 | MS.gene26413:intron | 35.0% |
| !! | CAAGACCCGCAATTTAATTT+TGG | + | chr4.1:22270944-22270963 | MS.gene26413:CDS | 35.0% |
| !! | GTATCATCTTGCTTTTGGTT+CGG | - | chr4.1:22270617-22270636 | None:intergenic | 35.0% |
| !!! | CTTTTTGATTTCTTGGGGTA+GGG | - | chr4.1:22270404-22270423 | None:intergenic | 35.0% |
| !!! | GACACGCATTTTTTTCAAAC+TGG | + | chr4.1:22272363-22272382 | MS.gene26413:intron | 35.0% |
| !!! | GATGTTTGGTTTTCAGGTTT+TGG | + | chr4.1:22271248-22271267 | MS.gene26413:intron | 35.0% |
| !!! | GCGCGTTTTTGAAACAATTT+TGG | + | chr4.1:22273036-22273055 | MS.gene26413:intron | 35.0% |
| !!! | GGTTTTAGGTAGTTGTAGAT+CGG | - | chr4.1:22270663-22270682 | None:intergenic | 35.0% |
| !!! | TCTTTTTGATTTCTTGGGGT+AGG | - | chr4.1:22270405-22270424 | None:intergenic | 35.0% |
| AACCATCAAAATCGTCTGCA+TGG | + | chr4.1:22269645-22269664 | MS.gene26413:CDS | 40.0% | |
| AAGAAAGAAATCCTGGACCA+AGG | + | chr4.1:22270189-22270208 | MS.gene26413:CDS | 40.0% | |
| AAGTAATCGAGGTTAACGCA+GGG | + | chr4.1:22271315-22271334 | MS.gene26413:CDS | 40.0% | |
| ATGACATGACAACACTAGAG+GGG | + | chr4.1:22270735-22270754 | MS.gene26413:CDS | 40.0% | |
| CACCCAAAATTTCAAGCACA+AGG | + | chr4.1:22271119-22271138 | MS.gene26413:intron | 40.0% | |
| CAGAACTGCTCTATTACCAA+AGG | - | chr4.1:22271360-22271379 | None:intergenic | 40.0% | |
| GCGTGTTAGGATTAAGAGTT+TGG | + | chr4.1:22272771-22272790 | MS.gene26413:intron | 40.0% | |
| GGAGAGATTGTGGATGAATT+AGG | - | chr4.1:22270596-22270615 | None:intergenic | 40.0% | |
| GGTGAGGGTTCAATCATATT+CGG | - | chr4.1:22270782-22270801 | None:intergenic | 40.0% | |
| GTGAAGTGATAGGAAAAGAG+GGG | - | chr4.1:22272029-22272048 | None:intergenic | 40.0% | |
| GTGAGGGTTCAATCATATTC+GGG | - | chr4.1:22270781-22270800 | None:intergenic | 40.0% | |
| GTGCATGTGCATCATATTCA+TGG | - | chr4.1:22270921-22270940 | None:intergenic | 40.0% | |
| GTGTGAAGTGATAGGAAAAG+AGG | - | chr4.1:22272031-22272050 | None:intergenic | 40.0% | |
| GTTAACCTCGATTACTTCGT+TGG | - | chr4.1:22271312-22271331 | None:intergenic | 40.0% | |
| TATTGTGATTTCACTGGGAG+AGG | - | chr4.1:22270525-22270544 | None:intergenic | 40.0% | |
| TGAAGTGATAGGAAAAGAGG+GGG | - | chr4.1:22272028-22272047 | None:intergenic | 40.0% | |
| TGAGTGAACAACAGTTGCTT+AGG | + | chr4.1:22271559-22271578 | MS.gene26413:intron | 40.0% | |
| TGGAAGCAATCTACAACTCA+GGG | + | chr4.1:22270249-22270268 | MS.gene26413:CDS | 40.0% | |
| TGTAGATTGCTTCCAGAATG+CGG | - | chr4.1:22270244-22270263 | None:intergenic | 40.0% | |
| TTATCAGCATGCGGTTGAAT+TGG | + | chr4.1:22272614-22272633 | MS.gene26413:intron | 40.0% | |
| TTCGGCTTTCAAAATGTGGA+CGG | + | chr4.1:22272845-22272864 | MS.gene26413:intron | 40.0% | |
| TTTCAAAACCGCAAGTCCAA+AGG | + | chr4.1:22270362-22270381 | MS.gene26413:CDS | 40.0% | |
| ! | AGTTGTAGATCGGTTTCAGT+TGG | - | chr4.1:22270653-22270672 | None:intergenic | 40.0% |
| ! | GTGATTCGAGTGTCTTTTAC+TGG | + | chr4.1:22270339-22270358 | MS.gene26413:CDS | 40.0% |
| ! | GTTGTAGATCGGTTTCAGTT+GGG | - | chr4.1:22270652-22270671 | None:intergenic | 40.0% |
| ! | TACCATGCAGACGATTTTGA+TGG | - | chr4.1:22269650-22269669 | None:intergenic | 40.0% |
| ! | TTGTAGATCGGTTTCAGTTG+GGG | - | chr4.1:22270651-22270670 | None:intergenic | 40.0% |
| !! | ATGAGGAGGAGATAATGGAA+CGG | + | chr4.1:22272946-22272965 | MS.gene26413:intron | 40.0% |
| !! | ATGCAGACGATTTTGATGGT+TGG | - | chr4.1:22269646-22269665 | None:intergenic | 40.0% |
| !! | GATGATGAAGATGGATTAGG+TGG | - | chr4.1:22270482-22270501 | None:intergenic | 40.0% |
| !! | TGTTTTTGCCTTTGGACTTG+CGG | - | chr4.1:22270373-22270392 | None:intergenic | 40.0% |
| !!! | TTGGTTTTCAGGTTTTGGTG+AGG | + | chr4.1:22271253-22271272 | MS.gene26413:intron | 40.0% |
| ACGTTGCTTCTTCGTGATGA+TGG | + | chr4.1:22273289-22273308 | MS.gene26413:CDS | 45.0% | |
| AGACCATTGAAGAGAGAGGA+GGG | - | chr4.1:22269675-22269694 | None:intergenic | 45.0% | |
| ATAGACGTGTGCAATGTGCA+TGG | + | chr4.1:22271166-22271185 | MS.gene26413:intron | 45.0% | |
| ATGCACATTGCACACGTCTA+TGG | - | chr4.1:22271167-22271186 | None:intergenic | 45.0% | |
| CCACGTAATAATCAGCTCCA+TGG | - | chr4.1:22271445-22271464 | None:intergenic | 45.0% | |
| CCATGGAGCTGATTATTACG+TGG | + | chr4.1:22271442-22271461 | MS.gene26413:CDS | 45.0% | |
| CGTTGCTTCTTCGTGATGAT+GGG | + | chr4.1:22273290-22273309 | MS.gene26413:CDS | 45.0% | |
| CTGAACTTCAGAGGAGGATA+CGG | + | chr4.1:22273260-22273279 | MS.gene26413:CDS | 45.0% | |
| CTGGAAGCAATCTACAACTC+AGG | + | chr4.1:22270248-22270267 | MS.gene26413:CDS | 45.0% | |
| GAAGTAATCGAGGTTAACGC+AGG | + | chr4.1:22271314-22271333 | MS.gene26413:CDS | 45.0% | |
| GTCGGACCATATTTGCTTGA+CGG | + | chr4.1:22269966-22269985 | MS.gene26413:intron | 45.0% | |
| TACTGCCAACGAAGTAATCG+AGG | + | chr4.1:22271304-22271323 | MS.gene26413:CDS | 45.0% | |
| TCGGCTTTCAAAATGTGGAC+GGG | + | chr4.1:22272846-22272865 | MS.gene26413:intron | 45.0% | |
| TGCACATTGCACACGTCTAT+GGG | - | chr4.1:22271166-22271185 | None:intergenic | 45.0% | |
| TGGTTGGAGTTCGACGAATT+TGG | - | chr4.1:22269630-22269649 | None:intergenic | 45.0% | |
| TTAGGAGCTGGATCTGCAAT+TGG | - | chr4.1:22270431-22270450 | None:intergenic | 45.0% | |
| TTGCAGTTGCTGAACTTCAG+AGG | + | chr4.1:22273251-22273270 | MS.gene26413:CDS | 45.0% | |
| TTGGAGACCATTGAAGAGAG+AGG | - | chr4.1:22269679-22269698 | None:intergenic | 45.0% | |
| ! | AGAGGCTCTTTGGTGATTAG+AGG | - | chr4.1:22270507-22270526 | None:intergenic | 45.0% |
| ! | TCCATGGTAGAGTGAGTTGA+GGG | - | chr4.1:22271429-22271448 | None:intergenic | 45.0% |
| !! | AGGAGATAATGGAACGGCTA+GGG | + | chr4.1:22272952-22272971 | MS.gene26413:intron | 45.0% |
| !! | GATGAAGATGGATTAGGTGG+TGG | - | chr4.1:22270479-22270498 | None:intergenic | 45.0% |
| !! | TCAGGTTTTGGTGAGGAAGA+TGG | + | chr4.1:22271260-22271279 | MS.gene26413:intron | 45.0% |
| !!! | CTTTTGGTTCGGAGAGATTG+TGG | - | chr4.1:22270606-22270625 | None:intergenic | 45.0% |
| AACCCCTCCTCTCTCTTCAA+TGG | + | chr4.1:22269669-22269688 | MS.gene26413:intron | 50.0% | |
| AACTTCAGAGGAGGATACGG+AGG | + | chr4.1:22273263-22273282 | MS.gene26413:CDS | 50.0% | |
| ACCCTCAACTCACTCTACCA+TGG | + | chr4.1:22271425-22271444 | MS.gene26413:CDS | 50.0% | |
| ACTTCAGAGGAGGATACGGA+GGG | + | chr4.1:22273264-22273283 | MS.gene26413:CDS | 50.0% | |
| AGCAGGTGCACTCATGTCAA+TGG | - | chr4.1:22271029-22271048 | None:intergenic | 50.0% | |
| CAGTTGCTGAACTTCAGAGG+AGG | + | chr4.1:22273254-22273273 | MS.gene26413:CDS | 50.0% | |
| CTCCATGGTAGAGTGAGTTG+AGG | - | chr4.1:22271430-22271449 | None:intergenic | 50.0% | |
| GACCATTGAAGAGAGAGGAG+GGG | - | chr4.1:22269674-22269693 | None:intergenic | 50.0% | |
| GAGACCATTGAAGAGAGAGG+AGG | - | chr4.1:22269676-22269695 | None:intergenic | 50.0% | |
| GGGAGAGAGTTATTAGGAGC+TGG | - | chr4.1:22270443-22270462 | None:intergenic | 50.0% | |
| GTTTGACTCCTTCTGTACCC+CGG | + | chr4.1:22271379-22271398 | MS.gene26413:CDS | 50.0% | |
| TGATCTTGCTCCTCTACCTC+CGG | + | chr4.1:22271003-22271022 | MS.gene26413:CDS | 50.0% | |
| TTTCACTGGGAGAGGCTCTT+TGG | - | chr4.1:22270517-22270536 | None:intergenic | 50.0% | |
| ! | ATGCGGATTTGCTCAGGCTT+TGG | - | chr4.1:22270227-22270246 | None:intergenic | 50.0% |
| ! | CCATTCATCGGTTAGAACCG+GGG | - | chr4.1:22271399-22271418 | None:intergenic | 50.0% |
| ! | CCCATTCATCGGTTAGAACC+GGG | - | chr4.1:22271400-22271419 | None:intergenic | 50.0% |
| ! | CCCCATTCATCGGTTAGAAC+CGG | - | chr4.1:22271401-22271420 | None:intergenic | 50.0% |
| ! | CCCGGTTCTAACCGATGAAT+GGG | + | chr4.1:22271397-22271416 | MS.gene26413:CDS | 50.0% |
| ! | CCGGTTCTAACCGATGAATG+GGG | + | chr4.1:22271398-22271417 | MS.gene26413:CDS | 50.0% |
| ! | TCCAGAATGCGGATTTGCTC+AGG | - | chr4.1:22270233-22270252 | None:intergenic | 50.0% |
| ! | TGCGGATTTGCTCAGGCTTT+GGG | - | chr4.1:22270226-22270245 | None:intergenic | 50.0% |
| ! | TTTGGGTTCCATCTTGGCCT+TGG | - | chr4.1:22270209-22270228 | None:intergenic | 50.0% |
| !! | ATGGATTAGGTGGTGGTGGT+GGG | - | chr4.1:22270472-22270491 | None:intergenic | 50.0% |
| !! | GAAGATGGATTAGGTGGTGG+TGG | - | chr4.1:22270476-22270495 | None:intergenic | 50.0% |
| !! | GAGGAGATAATGGAACGGCT+AGG | + | chr4.1:22272951-22272970 | MS.gene26413:intron | 50.0% |
| !! | TCAGGCTTTGGGTTCCATCT+TGG | - | chr4.1:22270215-22270234 | None:intergenic | 50.0% |
| ATCCTGGACCAAGGCCAAGA+TGG | + | chr4.1:22270198-22270217 | MS.gene26413:CDS | 55.0% | |
| ATGTCAATGGCCGGAGGTAG+AGG | - | chr4.1:22271016-22271035 | None:intergenic | 55.0% | |
| GAGGGTGACACCCCATTCAT+CGG | - | chr4.1:22271411-22271430 | None:intergenic | 55.0% | |
| GCCTGAGCAAATCCGCATTC+TGG | + | chr4.1:22270229-22270248 | MS.gene26413:CDS | 55.0% | |
| GGTGCACTCATGTCAATGGC+CGG | - | chr4.1:22271025-22271044 | None:intergenic | 55.0% | |
| GGTTAGAACCGGGGTACAGA+AGG | - | chr4.1:22271390-22271409 | None:intergenic | 55.0% | |
| ! | CCCCGGTTCTAACCGATGAA+TGG | + | chr4.1:22271396-22271415 | MS.gene26413:CDS | 55.0% |
| !! | GATGGATTAGGTGGTGGTGG+TGG | - | chr4.1:22270473-22270492 | None:intergenic | 55.0% |
| !! | GTGGTGGTGGTGGGATTTGT+GGG | - | chr4.1:22270463-22270482 | None:intergenic | 55.0% |
| !! | TTCCATCTTGGCCTTGGTCC+AGG | - | chr4.1:22270203-22270222 | None:intergenic | 55.0% |
| GCACTCATGTCAATGGCCGG+AGG | - | chr4.1:22271022-22271041 | None:intergenic | 60.0% | |
| !! | GGTGGTGGTGGTGGGATTTG+TGG | - | chr4.1:22270464-22270483 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 22269579 | 22273343 | 22269579 | ID=MS.gene26413 |
| chr4.1 | mRNA | 22269579 | 22273343 | 22269579 | ID=MS.gene26413.t1;Parent=MS.gene26413 |
| chr4.1 | exon | 22269579 | 22269666 | 22269579 | ID=MS.gene26413.t1.exon1;Parent=MS.gene26413.t1 |
| chr4.1 | CDS | 22269579 | 22269666 | 22269579 | ID=cds.MS.gene26413.t1;Parent=MS.gene26413.t1 |
| chr4.1 | exon | 22270177 | 22271085 | 22270177 | ID=MS.gene26413.t1.exon2;Parent=MS.gene26413.t1 |
| chr4.1 | CDS | 22270177 | 22271085 | 22270177 | ID=cds.MS.gene26413.t1;Parent=MS.gene26413.t1 |
| chr4.1 | exon | 22271264 | 22271463 | 22271264 | ID=MS.gene26413.t1.exon3;Parent=MS.gene26413.t1 |
| chr4.1 | CDS | 22271264 | 22271463 | 22271264 | ID=cds.MS.gene26413.t1;Parent=MS.gene26413.t1 |
| chr4.1 | exon | 22273230 | 22273343 | 22273230 | ID=MS.gene26413.t1.exon4;Parent=MS.gene26413.t1 |
| chr4.1 | CDS | 22273230 | 22273343 | 22273230 | ID=cds.MS.gene26413.t1;Parent=MS.gene26413.t1 |
| Gene Sequence |
| Protein sequence |
