Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26699.t1 | GAU29118.1 | 77.2 | 746 | 62 | 7 | 1 | 692 | 1 | 692 | 0.00E+00 | 1100.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26699.t1 | Q9SZL8 | 32.1 | 670 | 415 | 8 | 27 | 659 | 71 | 737 | 4.4e-92 | 340.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26699.t1 | A0A2Z6MBM1 | 77.2 | 746 | 62 | 7 | 1 | 692 | 1 | 692 | 0.0e+00 | 1100.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26699.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26699.t1 | MTR_0402s0040 | 50.151 | 331 | 90 | 6 | 360 | 689 | 200 | 456 | 1.54e-84 | 275 |
| MS.gene26699.t1 | MTR_0402s0040 | 59.756 | 164 | 38 | 1 | 40 | 175 | 37 | 200 | 2.75e-55 | 197 |
| MS.gene26699.t1 | MTR_1g086270 | 82.716 | 81 | 14 | 0 | 295 | 375 | 1 | 81 | 4.62e-44 | 154 |
| MS.gene26699.t1 | MTR_5g015480 | 48.824 | 170 | 35 | 3 | 10 | 129 | 18 | 185 | 3.54e-35 | 134 |
| MS.gene26699.t1 | MTR_6g051425 | 29.655 | 290 | 155 | 6 | 39 | 281 | 27 | 314 | 4.49e-33 | 130 |
| MS.gene26699.t1 | MTR_0558s0020 | 31.174 | 247 | 122 | 7 | 43 | 241 | 50 | 296 | 3.05e-29 | 118 |
| MS.gene26699.t1 | MTR_0137s0040 | 48.551 | 138 | 21 | 2 | 19 | 131 | 1 | 113 | 3.89e-29 | 112 |
| MS.gene26699.t1 | MTR_6g017200 | 53.390 | 118 | 26 | 2 | 20 | 108 | 20 | 137 | 6.21e-29 | 113 |
| MS.gene26699.t1 | MTR_1g057920 | 55.856 | 111 | 24 | 1 | 23 | 108 | 3 | 113 | 6.60e-29 | 112 |
| MS.gene26699.t1 | MTR_2g070590 | 72.464 | 69 | 19 | 0 | 40 | 108 | 28 | 96 | 2.54e-26 | 104 |
| MS.gene26699.t1 | MTR_8g446020 | 36.691 | 139 | 87 | 1 | 104 | 241 | 118 | 256 | 2.88e-25 | 105 |
| MS.gene26699.t1 | MTR_6g090505 | 39.130 | 138 | 83 | 1 | 104 | 240 | 93 | 230 | 2.13e-24 | 105 |
| MS.gene26699.t1 | MTR_1g070355 | 31.004 | 229 | 123 | 6 | 39 | 235 | 84 | 309 | 9.34e-23 | 103 |
| MS.gene26699.t1 | MTR_7g074790 | 42.254 | 142 | 71 | 3 | 39 | 170 | 20 | 160 | 3.36e-22 | 96.3 |
| MS.gene26699.t1 | MTR_4g102720 | 37.500 | 136 | 78 | 2 | 32 | 167 | 10 | 138 | 1.83e-20 | 91.3 |
| MS.gene26699.t1 | MTR_7g113010 | 39.375 | 160 | 29 | 3 | 20 | 125 | 423 | 568 | 3.21e-18 | 89.4 |
| MS.gene26699.t1 | MTR_1g091013 | 67.857 | 56 | 18 | 0 | 42 | 97 | 14 | 69 | 1.59e-16 | 74.7 |
| MS.gene26699.t1 | MTR_4g035820 | 28.571 | 245 | 132 | 7 | 39 | 245 | 85 | 324 | 2.76e-16 | 83.2 |
| MS.gene26699.t1 | MTR_6g022070 | 28.736 | 174 | 119 | 1 | 295 | 468 | 1 | 169 | 7.39e-16 | 79.7 |
| MS.gene26699.t1 | MTR_5g039760 | 33.721 | 172 | 91 | 5 | 39 | 196 | 20 | 182 | 1.63e-15 | 75.9 |
| MS.gene26699.t1 | MTR_1g083640 | 26.147 | 218 | 113 | 6 | 43 | 212 | 65 | 282 | 4.69e-15 | 76.6 |
| MS.gene26699.t1 | MTR_5g045210 | 33.333 | 126 | 81 | 1 | 532 | 654 | 20 | 145 | 3.17e-14 | 72.4 |
| MS.gene26699.t1 | MTR_7g446520 | 28.033 | 239 | 147 | 6 | 27 | 246 | 86 | 318 | 3.60e-14 | 74.7 |
| MS.gene26699.t1 | MTR_7g446510 | 32.867 | 143 | 93 | 2 | 108 | 248 | 187 | 328 | 2.43e-12 | 69.3 |
| MS.gene26699.t1 | MTR_0291s0060 | 72.500 | 40 | 11 | 0 | 40 | 79 | 46 | 85 | 9.26e-12 | 62.0 |
| MS.gene26699.t1 | MTR_0337s0060 | 25.806 | 279 | 131 | 9 | 391 | 655 | 21 | 237 | 1.27e-11 | 65.5 |
| MS.gene26699.t1 | MTR_7g446480 | 28.829 | 222 | 128 | 6 | 28 | 247 | 119 | 312 | 4.09e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26699.t1 | AT4G38180 | 34.589 | 584 | 337 | 9 | 39 | 582 | 83 | 661 | 3.44e-106 | 341 |
| MS.gene26699.t1 | AT4G15090 | 29.870 | 616 | 387 | 7 | 38 | 617 | 60 | 666 | 3.22e-88 | 294 |
| MS.gene26699.t1 | AT4G15090 | 29.870 | 616 | 387 | 7 | 38 | 617 | 60 | 666 | 3.22e-88 | 294 |
| MS.gene26699.t1 | AT4G15090 | 29.870 | 616 | 387 | 7 | 38 | 617 | 60 | 666 | 3.22e-88 | 294 |
| MS.gene26699.t1 | AT4G15090 | 29.870 | 616 | 387 | 7 | 38 | 617 | 60 | 666 | 3.22e-88 | 294 |
| MS.gene26699.t1 | AT4G15090 | 29.870 | 616 | 387 | 7 | 38 | 617 | 60 | 666 | 3.22e-88 | 294 |
| MS.gene26699.t1 | AT3G22170 | 30.102 | 588 | 377 | 11 | 38 | 600 | 79 | 657 | 4.77e-84 | 283 |
| MS.gene26699.t1 | AT3G22170 | 30.102 | 588 | 377 | 11 | 38 | 600 | 79 | 657 | 4.77e-84 | 283 |
| MS.gene26699.t1 | AT1G76320 | 30.693 | 606 | 350 | 16 | 38 | 600 | 6 | 584 | 1.31e-80 | 270 |
| MS.gene26699.t1 | AT1G76320 | 30.693 | 606 | 350 | 16 | 38 | 600 | 6 | 584 | 4.89e-80 | 270 |
| MS.gene26699.t1 | AT1G76320 | 30.693 | 606 | 350 | 16 | 38 | 600 | 6 | 584 | 4.89e-80 | 270 |
| MS.gene26699.t1 | AT1G76320 | 30.693 | 606 | 350 | 16 | 38 | 600 | 6 | 584 | 5.38e-80 | 270 |
| MS.gene26699.t1 | AT2G27110 | 30.435 | 621 | 378 | 15 | 10 | 600 | 25 | 621 | 3.41e-78 | 267 |
| MS.gene26699.t1 | AT2G27110 | 30.435 | 621 | 378 | 15 | 10 | 600 | 25 | 621 | 3.41e-78 | 267 |
| MS.gene26699.t1 | AT2G27110 | 34.965 | 429 | 265 | 8 | 179 | 600 | 55 | 476 | 4.24e-76 | 258 |
| MS.gene26699.t1 | AT3G06250 | 29.352 | 586 | 371 | 12 | 41 | 612 | 202 | 758 | 1.03e-73 | 253 |
| MS.gene26699.t1 | AT3G06250 | 29.352 | 586 | 371 | 12 | 41 | 612 | 202 | 758 | 1.03e-73 | 253 |
| MS.gene26699.t1 | AT3G06250 | 29.352 | 586 | 371 | 12 | 41 | 612 | 202 | 758 | 1.03e-73 | 253 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 48 | 605 | 6.38e-71 | 246 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 7 | 564 | 1.19e-70 | 245 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 7 | 564 | 1.26e-70 | 245 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 48 | 605 | 2.32e-70 | 245 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 48 | 605 | 2.32e-70 | 245 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 48 | 605 | 2.98e-70 | 244 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 48 | 605 | 2.98e-70 | 244 |
| MS.gene26699.t1 | AT2G32250 | 28.473 | 583 | 383 | 11 | 39 | 612 | 48 | 605 | 2.98e-70 | 244 |
| MS.gene26699.t1 | AT5G18960 | 28.790 | 587 | 376 | 13 | 41 | 612 | 223 | 782 | 3.18e-68 | 239 |
| MS.gene26699.t1 | AT5G18960 | 28.790 | 587 | 376 | 13 | 41 | 612 | 223 | 782 | 3.18e-68 | 239 |
| MS.gene26699.t1 | AT4G38170 | 30.065 | 459 | 295 | 10 | 179 | 625 | 21 | 465 | 6.56e-64 | 222 |
| MS.gene26699.t1 | AT1G10240 | 26.726 | 565 | 359 | 10 | 38 | 558 | 57 | 610 | 5.66e-62 | 219 |
| MS.gene26699.t1 | AT1G10240 | 26.726 | 565 | 359 | 10 | 38 | 558 | 57 | 610 | 5.66e-62 | 219 |
| MS.gene26699.t1 | AT4G19990 | 27.212 | 599 | 390 | 9 | 39 | 610 | 31 | 610 | 3.45e-60 | 216 |
| MS.gene26699.t1 | AT4G19990 | 27.212 | 599 | 390 | 9 | 39 | 610 | 31 | 610 | 3.63e-60 | 216 |
| MS.gene26699.t1 | AT4G19990 | 27.212 | 599 | 390 | 9 | 39 | 610 | 31 | 610 | 3.63e-60 | 216 |
| MS.gene26699.t1 | AT4G19990 | 27.212 | 599 | 390 | 9 | 39 | 610 | 45 | 624 | 3.69e-60 | 216 |
| MS.gene26699.t1 | AT4G19990 | 27.212 | 599 | 390 | 9 | 39 | 610 | 31 | 610 | 4.84e-60 | 216 |
| MS.gene26699.t1 | AT4G19990 | 27.212 | 599 | 390 | 9 | 39 | 610 | 31 | 610 | 4.84e-60 | 216 |
| MS.gene26699.t1 | AT4G19990 | 27.562 | 566 | 368 | 10 | 60 | 610 | 15 | 553 | 3.64e-54 | 198 |
| MS.gene26699.t1 | AT1G80010 | 26.389 | 576 | 348 | 12 | 38 | 555 | 104 | 661 | 3.10e-52 | 193 |
| MS.gene26699.t1 | AT5G28530 | 25.427 | 586 | 375 | 14 | 41 | 575 | 67 | 641 | 1.42e-51 | 190 |
| MS.gene26699.t1 | AT5G28530 | 25.507 | 592 | 363 | 15 | 41 | 575 | 67 | 637 | 3.61e-51 | 189 |
| MS.gene26699.t1 | AT5G28530 | 25.507 | 592 | 363 | 15 | 41 | 575 | 67 | 637 | 3.61e-51 | 189 |
| MS.gene26699.t1 | AT1G52520 | 27.174 | 552 | 357 | 14 | 38 | 553 | 94 | 636 | 2.91e-48 | 181 |
| MS.gene26699.t1 | AT5G28530 | 22.396 | 576 | 342 | 14 | 41 | 575 | 67 | 578 | 6.38e-31 | 129 |
| MS.gene26699.t1 | AT5G28530 | 22.337 | 582 | 331 | 14 | 41 | 575 | 67 | 574 | 1.75e-30 | 127 |
Find 106 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCTCCTTCCATGATTT+AGG | 0.199189 | 8.4:+10132068 | None:intergenic |
| GAAATTCTTCATATTCTTCT+TGG | 0.203404 | 8.4:+10132666 | None:intergenic |
| ATAAACGATTATGGATATTT+TGG | 0.203454 | 8.4:-10133433 | MS.gene26699:CDS |
| AGCAAATAACAAATATCTTT+TGG | 0.204370 | 8.4:-10133471 | MS.gene26699:CDS |
| AATAAGGAGAGGAAAGTAAT+AGG | 0.229152 | 8.4:-10132584 | MS.gene26699:CDS |
| CTCACCATTTGTAATTGATA+TGG | 0.238596 | 8.4:+10132175 | None:intergenic |
| TTGAAATTGATGGCTCATTA+AGG | 0.253482 | 8.4:+10134198 | None:intergenic |
| AGAATTTCCTTCGAACTAAA+AGG | 0.257081 | 8.4:-10133597 | MS.gene26699:CDS |
| TGTTGAAGGTGTAGAGAAAT+TGG | 0.264261 | 8.4:-10134174 | MS.gene26699:CDS |
| TTTGGTATTCGTCGAGAATA+TGG | 0.268503 | 8.4:-10134003 | MS.gene26699:CDS |
| GAAATTGGATAGAAAGAAAA+AGG | 0.272410 | 8.4:-10132051 | MS.gene26699:CDS |
| AGCAGAAATGGGAGCTCTTT+TGG | 0.284940 | 8.4:+10133095 | None:intergenic |
| GTTATGCCTCAAACATTTCA+TGG | 0.308775 | 8.4:-10133172 | MS.gene26699:CDS |
| GAAGAATATGAAGAATTTCT+AGG | 0.312241 | 8.4:-10132662 | MS.gene26699:CDS |
| TTTGAAGTCAGATATAAATT+TGG | 0.313176 | 8.4:-10132852 | MS.gene26699:CDS |
| TAGTTCGAAGGAAATTCTTA+TGG | 0.319083 | 8.4:+10133602 | None:intergenic |
| GAAAGGACGTCATATTGATT+TGG | 0.328106 | 8.4:-10132390 | MS.gene26699:CDS |
| TAAATCATGGAAGGAGAAAT+TGG | 0.331287 | 8.4:-10132066 | MS.gene26699:CDS |
| CCTTCAACAATTGAAATTGA+TGG | 0.337251 | 8.4:+10134188 | None:intergenic |
| GCACAGATGATAAACGATTA+TGG | 0.341323 | 8.4:-10133442 | MS.gene26699:CDS |
| TATAAATGATGATGACAATA+AGG | 0.364668 | 8.4:-10132600 | MS.gene26699:CDS |
| TTTATGTCTTGACTCATAAT+CGG | 0.369202 | 8.4:+10132769 | None:intergenic |
| TGGCAAAATACTTTCATGAA+TGG | 0.371247 | 8.4:+10134145 | None:intergenic |
| CTTCAAAATCCGAGCAGAAA+TGG | 0.375608 | 8.4:+10133083 | None:intergenic |
| ACGTGCTTTACACCCAGTTC+TGG | 0.377947 | 8.4:+10133867 | None:intergenic |
| CATATCCTCAACTATCTTGT+TGG | 0.380860 | 8.4:+10132247 | None:intergenic |
| AAACAATTCCTTCCTTTCAA+TGG | 0.386086 | 8.4:-10133288 | MS.gene26699:CDS |
| CGACCATTGGGAGTATTTGT+TGG | 0.391913 | 8.4:-10133364 | MS.gene26699:CDS |
| GTCTATTCCACCAACTTGCT+TGG | 0.399516 | 8.4:+10133648 | None:intergenic |
| ATAGGTGGTTCACATGCCTT+AGG | 0.401174 | 8.4:+10133119 | None:intergenic |
| ATAAGGAGAGGAAAGTAATA+GGG | 0.405782 | 8.4:-10132583 | MS.gene26699:CDS |
| TACAACATACAAGACAAATA+AGG | 0.410215 | 8.4:-10133392 | MS.gene26699:CDS |
| AAAATCCTTTGGCTTTAATC+CGG | 0.414261 | 8.4:+10133684 | None:intergenic |
| TGCATAAAGAATTTGAATGA+TGG | 0.425164 | 8.4:-10132635 | MS.gene26699:CDS |
| CGTACTGATGGAGAATCAAT+TGG | 0.425368 | 8.4:-10132212 | MS.gene26699:CDS |
| ATACTCATTATAAAATTCAT+AGG | 0.433466 | 8.4:+10134041 | None:intergenic |
| TTCAAAATCCGAGCAGAAAT+GGG | 0.435563 | 8.4:+10133084 | None:intergenic |
| ACATACTCATGAAAATCCTT+TGG | 0.439521 | 8.4:+10133673 | None:intergenic |
| TCTAGAGCAGAAACCAGAAC+TGG | 0.439558 | 8.4:-10133880 | MS.gene26699:CDS |
| ACCACCTCTTTGTCATTCCA+CGG | 0.452949 | 8.4:-10134394 | MS.gene26699:CDS |
| GTTGGACTCGTCATAGACTT+TGG | 0.455604 | 8.4:+10132265 | None:intergenic |
| CCATCAATTTCAATTGTTGA+AGG | 0.458479 | 8.4:-10134188 | MS.gene26699:CDS |
| TATAGCAGGAGAATCGGATT+TGG | 0.460968 | 8.4:-10134021 | MS.gene26699:CDS |
| AGGTGGTGGACGGCCAGAAT+TGG | 0.466416 | 8.4:+10134410 | None:intergenic |
| GTAATAAACGTCCTAAATCA+TGG | 0.467780 | 8.4:-10132079 | MS.gene26699:CDS |
| AAGATGGAGAAAACCAATTC+TGG | 0.469862 | 8.4:-10134423 | MS.gene26699:CDS |
| AGGGAGTTTCGAGGATCAAA+AGG | 0.469959 | 8.4:-10132564 | MS.gene26699:CDS |
| TCAAATAACCATTGAAAGGA+AGG | 0.471148 | 8.4:+10133280 | None:intergenic |
| GGTCAGGAAGTAATCGAGAT+TGG | 0.476854 | 8.4:-10132412 | MS.gene26699:CDS |
| TGAAAGTCATAAAAGAAAGA+AGG | 0.477032 | 8.4:+10133508 | None:intergenic |
| TCCTAAGTTGAAAATTAAGA+AGG | 0.489936 | 8.4:-10132744 | MS.gene26699:CDS |
| CATTTCATGGACTATGCACT+TGG | 0.490965 | 8.4:-10133159 | MS.gene26699:CDS |
| CAAGATAGTTGAGGATATGT+TGG | 0.494952 | 8.4:-10132243 | MS.gene26699:CDS |
| AAGATTCTCGTGCTTTAAAG+AGG | 0.497851 | 8.4:-10133944 | MS.gene26699:CDS |
| GTTGGTGGAATAGACATAGT+TGG | 0.498391 | 8.4:-10133640 | MS.gene26699:CDS |
| AATGAGTATAGCAGGAGAAT+CGG | 0.498444 | 8.4:-10134027 | MS.gene26699:CDS |
| GTTTCCATATCAATTACAAA+TGG | 0.502177 | 8.4:-10132179 | MS.gene26699:CDS |
| AATAAGGATTATCGACCATT+GGG | 0.502732 | 8.4:-10133376 | MS.gene26699:CDS |
| AAATAAGGATTATCGACCAT+TGG | 0.506629 | 8.4:-10133377 | MS.gene26699:CDS |
| GCATAAAGAATTTGAATGAT+GGG | 0.507372 | 8.4:-10132634 | MS.gene26699:CDS |
| ATGGTCAAATTAACAAATAG+AGG | 0.510113 | 8.4:-10132320 | MS.gene26699:CDS |
| ATAATGTTTCTGATGATTCG+TGG | 0.513389 | 8.4:-10132994 | MS.gene26699:CDS |
| CATAGTCCATGAAATGTTTG+AGG | 0.517904 | 8.4:+10133166 | None:intergenic |
| TGGACAAGAGAAGCAAGGTC+AGG | 0.530771 | 8.4:-10132428 | MS.gene26699:CDS |
| TCACTGAGGTATGGTGAAGT+AGG | 0.535157 | 8.4:-10133568 | MS.gene26699:CDS |
| AAGATGAATTTCTGAACGCA+TGG | 0.536411 | 8.4:-10133036 | MS.gene26699:CDS |
| ATTGTGTTGGCTGATGAATC+CGG | 0.546006 | 8.4:-10133703 | MS.gene26699:CDS |
| TTGGCTAATAAGCGTACTGA+TGG | 0.547149 | 8.4:-10132224 | MS.gene26699:CDS |
| AGGAATCATTCACTGAGGTA+TGG | 0.556258 | 8.4:-10133577 | MS.gene26699:CDS |
| TAGTCATGCTTTGAAAGTGT+TGG | 0.559284 | 8.4:-10132498 | MS.gene26699:CDS |
| TAGGTGGTTCACATGCCTTA+GGG | 0.559416 | 8.4:+10133120 | None:intergenic |
| AACAGATCAAAATGCAGCAA+TGG | 0.565858 | 8.4:-10133212 | MS.gene26699:CDS |
| CCACCTCTTTGTCATTCCAC+GGG | 0.567560 | 8.4:-10134393 | MS.gene26699:intron |
| CACTTCGAAAGAGTTGTGAA+TGG | 0.569131 | 8.4:-10132815 | MS.gene26699:CDS |
| GCATTATTGATGTATTTCAA+AGG | 0.569965 | 8.4:-10133544 | MS.gene26699:CDS |
| TTTGTTAATTTGACCATCCG+AGG | 0.571395 | 8.4:+10132326 | None:intergenic |
| AAAGAGCTCCCATTTCTGCT+CGG | 0.571791 | 8.4:-10133092 | MS.gene26699:CDS |
| GCACGTATGCTTGTTCAAGC+CGG | 0.574035 | 8.4:-10132722 | MS.gene26699:CDS |
| CAATGATTTATGTCCTCGGA+TGG | 0.584590 | 8.4:-10132339 | MS.gene26699:CDS |
| AGTTTCAAATAACCATTGAA+AGG | 0.585078 | 8.4:+10133276 | None:intergenic |
| CGCTTGAGTATATAGTGCGA+AGG | 0.588820 | 8.4:+10132452 | None:intergenic |
| TCAAAATGCAGCAATGGCAA+AGG | 0.593305 | 8.4:-10133206 | MS.gene26699:CDS |
| GAAAGTAATAGGGAGTTTCG+AGG | 0.597851 | 8.4:-10132573 | MS.gene26699:CDS |
| AGATTCTCGTGCTTTAAAGA+GGG | 0.598984 | 8.4:-10133943 | MS.gene26699:CDS |
| GTGGAATGACAAAGAGGTGG+TGG | 0.601159 | 8.4:+10134396 | None:intergenic |
| CGCACTATATACTCAAGCGA+TGG | 0.601753 | 8.4:-10132448 | MS.gene26699:CDS |
| TAAACGTCCTAAATCATGGA+AGG | 0.606769 | 8.4:-10132075 | MS.gene26699:CDS |
| ACAAGCATCACAAATTGTGT+TGG | 0.607468 | 8.4:-10133716 | MS.gene26699:CDS |
| TAGACATAGTTGGTTATACA+AGG | 0.611692 | 8.4:-10133630 | MS.gene26699:CDS |
| TGCTTTAAAGAGGGAAAGCG+AGG | 0.618222 | 8.4:-10133934 | MS.gene26699:CDS |
| TGTCGTAAATTTGAGACACA+TGG | 0.618799 | 8.4:-10132530 | MS.gene26699:CDS |
| GATACAATGATTTATGTCCT+CGG | 0.618907 | 8.4:-10132343 | MS.gene26699:CDS |
| TATGTGTCCAAGCAAGTTGG+TGG | 0.620761 | 8.4:-10133655 | MS.gene26699:CDS |
| AGTCCAACAAATACTCCCAA+TGG | 0.630456 | 8.4:+10133361 | None:intergenic |
| CTAGAGCAGAAACCAGAACT+GGG | 0.631153 | 8.4:-10133879 | MS.gene26699:CDS |
| ATATAAGAGAAAATGCCCTA+AGG | 0.636935 | 8.4:-10133135 | MS.gene26699:CDS |
| TGAATCCGGATTAAAGCCAA+AGG | 0.646687 | 8.4:-10133689 | MS.gene26699:CDS |
| GGAAGTAATCGAGATTGGAA+AGG | 0.647331 | 8.4:-10132407 | MS.gene26699:CDS |
| AATGACAAAGAGGTGGTGGA+CGG | 0.652235 | 8.4:+10134400 | None:intergenic |
| AGCGATGGACAAGAGAAGCA+AGG | 0.654037 | 8.4:-10132433 | MS.gene26699:CDS |
| ATGATGATGACAATAAGGAG+AGG | 0.664429 | 8.4:-10132595 | MS.gene26699:CDS |
| TTACCCGTGGAATGACAAAG+AGG | 0.668554 | 8.4:+10134390 | None:intergenic |
| CCCGTGGAATGACAAAGAGG+TGG | 0.685949 | 8.4:+10134393 | None:intergenic |
| CGAGTCCAACAAGATAGTTG+AGG | 0.688158 | 8.4:-10132252 | MS.gene26699:CDS |
| GAGTATGTGTCCAAGCAAGT+TGG | 0.694904 | 8.4:-10133658 | MS.gene26699:CDS |
| CTAAAAGGAATCATTCACTG+AGG | 0.744388 | 8.4:-10133582 | MS.gene26699:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTCATTATAAAATTCAT+AGG | + | chr8.4:10132401-10132420 | None:intergenic | 15.0% |
| !! | TTTGTAGTATTAATTAAAAG+AGG | + | chr8.4:10132157-10132176 | None:intergenic | 15.0% |
| !! | ATTTCACTTGATTGAAAAAT+TGG | - | chr8.4:10132601-10132620 | MS.gene26699:CDS | 20.0% |
| !! | TATAATCTACAAAAGTTTCT+TGG | + | chr8.4:10132339-10132358 | None:intergenic | 20.0% |
| !! | TTGAAAAATTGGAAAATACA+AGG | - | chr8.4:10132612-10132631 | MS.gene26699:CDS | 20.0% |
| !!! | AATAAGTATTTTGTTAAACC+AGG | + | chr8.4:10132099-10132118 | None:intergenic | 20.0% |
| !!! | AATTTTATAATGAGTATAGC+AGG | - | chr8.4:10132404-10132423 | MS.gene26699:CDS | 20.0% |
| !!! | AGCAAATAACAAATATCTTT+TGG | - | chr8.4:10132968-10132987 | MS.gene26699:CDS | 20.0% |
| !!! | ATAAACGATTATGGATATTT+TGG | - | chr8.4:10133006-10133025 | MS.gene26699:CDS | 20.0% |
| !!! | GCAAATAACAAATATCTTTT+GGG | - | chr8.4:10132969-10132988 | MS.gene26699:CDS | 20.0% |
| !!! | TATAAATGATGATGACAATA+AGG | - | chr8.4:10133839-10133858 | MS.gene26699:intron | 20.0% |
| !!! | TCTTTCTTTTTTATTGCTTT+TGG | + | chr8.4:10134326-10134345 | None:intergenic | 20.0% |
| !!! | TTTCTTTTATGACTTTCAAA+TGG | - | chr8.4:10132936-10132955 | MS.gene26699:CDS | 20.0% |
| !!! | TTTGAAGTCAGATATAAATT+TGG | - | chr8.4:10133587-10133606 | MS.gene26699:CDS | 20.0% |
| ! | AGTTTCAAATAACCATTGAA+AGG | + | chr8.4:10133166-10133185 | None:intergenic | 25.0% |
| ! | ATGGTCAAATTAACAAATAG+AGG | - | chr8.4:10134119-10134138 | MS.gene26699:intron | 25.0% |
| ! | GAAATTCTTCATATTCTTCT+TGG | + | chr8.4:10133776-10133795 | None:intergenic | 25.0% |
| ! | GAAATTGGATAGAAAGAAAA+AGG | - | chr8.4:10134388-10134407 | MS.gene26699:intron | 25.0% |
| ! | GAAGAATATGAAGAATTTCT+AGG | - | chr8.4:10133777-10133796 | MS.gene26699:intron | 25.0% |
| ! | GCATAAAGAATTTGAATGAT+GGG | - | chr8.4:10133805-10133824 | MS.gene26699:intron | 25.0% |
| ! | GCATTATTGATGTATTTCAA+AGG | - | chr8.4:10132895-10132914 | MS.gene26699:CDS | 25.0% |
| ! | GTAGTATTAATTAAAAGAGG+AGG | + | chr8.4:10132154-10132173 | None:intergenic | 25.0% |
| ! | GTTTCCATATCAATTACAAA+TGG | - | chr8.4:10134260-10134279 | MS.gene26699:intron | 25.0% |
| ! | TACAACATACAAGACAAATA+AGG | - | chr8.4:10133047-10133066 | MS.gene26699:CDS | 25.0% |
| ! | TGAAAGTCATAAAAGAAAGA+AGG | + | chr8.4:10132934-10132953 | None:intergenic | 25.0% |
| ! | TGCATAAAGAATTTGAATGA+TGG | - | chr8.4:10133804-10133823 | MS.gene26699:intron | 25.0% |
| ! | TTACACTCCAAAAATATTTG+AGG | - | chr8.4:10133746-10133765 | MS.gene26699:CDS | 25.0% |
| ! | TTTATGTCTTGACTCATAAT+CGG | + | chr8.4:10133673-10133692 | None:intergenic | 25.0% |
| !! | AATAACAAATATCTTTTGGG+CGG | - | chr8.4:10132972-10132991 | MS.gene26699:CDS | 25.0% |
| !! | TCCTAAGTTGAAAATTAAGA+AGG | - | chr8.4:10133695-10133714 | MS.gene26699:CDS | 25.0% |
| AAACAATTCCTTCCTTTCAA+TGG | - | chr8.4:10133151-10133170 | MS.gene26699:CDS | 30.0% | |
| AAATAAGGATTATCGACCAT+TGG | - | chr8.4:10133062-10133081 | MS.gene26699:CDS | 30.0% | |
| AATAAGGAGAGGAAAGTAAT+AGG | - | chr8.4:10133855-10133874 | MS.gene26699:intron | 30.0% | |
| AATAAGGATTATCGACCATT+GGG | - | chr8.4:10133063-10133082 | MS.gene26699:CDS | 30.0% | |
| AATTTCTCCTTCCATGATTT+AGG | + | chr8.4:10134374-10134393 | None:intergenic | 30.0% | |
| ACAAAAGTTTCTTGGCTATT+TGG | + | chr8.4:10132331-10132350 | None:intergenic | 30.0% | |
| ACATACTCATGAAAATCCTT+TGG | + | chr8.4:10132769-10132788 | None:intergenic | 30.0% | |
| AGAATTTCCTTCGAACTAAA+AGG | - | chr8.4:10132842-10132861 | MS.gene26699:CDS | 30.0% | |
| ATAAGGAGAGGAAAGTAATA+GGG | - | chr8.4:10133856-10133875 | MS.gene26699:intron | 30.0% | |
| ATATAAGAGAAAATGCCCTA+AGG | - | chr8.4:10133304-10133323 | MS.gene26699:CDS | 30.0% | |
| CACTCATTATTATTGAAACC+TGG | - | chr8.4:10132078-10132097 | MS.gene26699:CDS | 30.0% | |
| CCATCAATTTCAATTGTTGA+AGG | - | chr8.4:10132251-10132270 | MS.gene26699:CDS | 30.0% | |
| CCTTCAACAATTGAAATTGA+TGG | + | chr8.4:10132254-10132273 | None:intergenic | 30.0% | |
| CTCACCATTTGTAATTGATA+TGG | + | chr8.4:10134267-10134286 | None:intergenic | 30.0% | |
| GATACAATGATTTATGTCCT+CGG | - | chr8.4:10134096-10134115 | MS.gene26699:intron | 30.0% | |
| GGCAATAAAAGCAAAAAAGA+CGG | - | chr8.4:10132457-10132476 | MS.gene26699:CDS | 30.0% | |
| GTAATAAACGTCCTAAATCA+TGG | - | chr8.4:10134360-10134379 | MS.gene26699:intron | 30.0% | |
| TAAATCATGGAAGGAGAAAT+TGG | - | chr8.4:10134373-10134392 | MS.gene26699:intron | 30.0% | |
| TAGACATAGTTGGTTATACA+AGG | - | chr8.4:10132809-10132828 | MS.gene26699:CDS | 30.0% | |
| TAGTTCGAAGGAAATTCTTA+TGG | + | chr8.4:10132840-10132859 | None:intergenic | 30.0% | |
| TCAAATAACCATTGAAAGGA+AGG | + | chr8.4:10133162-10133181 | None:intergenic | 30.0% | |
| TGGCAAAATACTTTCATGAA+TGG | + | chr8.4:10132297-10132316 | None:intergenic | 30.0% | |
| TGGGAAAAATATTGAGTCAA+CGG | + | chr8.4:10132216-10132235 | None:intergenic | 30.0% | |
| TTTCGAAGTGTGTGAAAAAT+TGG | + | chr8.4:10133614-10133633 | None:intergenic | 30.0% | |
| ! | ATAATGTTTCTGATGATTCG+TGG | - | chr8.4:10133445-10133464 | MS.gene26699:CDS | 30.0% |
| ! | GAAACTTTTCTCAAAGCAAT+GGG | - | chr8.4:10133180-10133199 | MS.gene26699:CDS | 30.0% |
| ! | GCCTTCTTAATTTTCAACTT+AGG | + | chr8.4:10133699-10133718 | None:intergenic | 30.0% |
| ! | GCTATTTGGCAAAATACTTT+TGG | + | chr8.4:10132317-10132336 | None:intergenic | 30.0% |
| ! | TGAAACTTTTCTCAAAGCAA+TGG | - | chr8.4:10133179-10133198 | MS.gene26699:CDS | 30.0% |
| ! | TGATCTGTTAACATGGTTTT+TGG | + | chr8.4:10133216-10133235 | None:intergenic | 30.0% |
| ! | TGGAACTCCTCAAATATTTT+TGG | + | chr8.4:10133756-10133775 | None:intergenic | 30.0% |
| ! | TTGAAATTGATGGCTCATTA+AGG | + | chr8.4:10132244-10132263 | None:intergenic | 30.0% |
| !! | AAAATCCTTTGGCTTTAATC+CGG | + | chr8.4:10132758-10132777 | None:intergenic | 30.0% |
| !! | TGCATTTTGATCTGTTAACA+TGG | + | chr8.4:10133223-10133242 | None:intergenic | 30.0% |
| !!! | AATGATTCCTTTTAGTTCGA+AGG | + | chr8.4:10132852-10132871 | None:intergenic | 30.0% |
| !!! | TCAGACAAACTGTTGTTTTT+GGG | - | chr8.4:10133109-10133128 | MS.gene26699:CDS | 30.0% |
| !!! | TTCAGACAAACTGTTGTTTT+TGG | - | chr8.4:10133108-10133127 | MS.gene26699:CDS | 30.0% |
| !!! | TTTTCGAGTGAAGGAAAAAT+GGG | - | chr8.4:10133479-10133498 | MS.gene26699:CDS | 30.0% |
| !!! | TTTTGGAGTGTAAATGTTTC+CGG | + | chr8.4:10133739-10133758 | None:intergenic | 30.0% |
| !!! | TTTTTCGAGTGAAGGAAAAA+TGG | - | chr8.4:10133478-10133497 | MS.gene26699:CDS | 30.0% |
| AACAGATCAAAATGCAGCAA+TGG | - | chr8.4:10133227-10133246 | MS.gene26699:CDS | 35.0% | |
| AAGATGAATTTCTGAACGCA+TGG | - | chr8.4:10133403-10133422 | MS.gene26699:CDS | 35.0% | |
| AATGAGTATAGCAGGAGAAT+CGG | - | chr8.4:10132412-10132431 | MS.gene26699:CDS | 35.0% | |
| ACAAGCATCACAAATTGTGT+TGG | - | chr8.4:10132723-10132742 | MS.gene26699:CDS | 35.0% | |
| CAAGATAGTTGAGGATATGT+TGG | - | chr8.4:10134196-10134215 | MS.gene26699:CDS | 35.0% | |
| CATAGTCCATGAAATGTTTG+AGG | + | chr8.4:10133276-10133295 | None:intergenic | 35.0% | |
| CATATCCTCAACTATCTTGT+TGG | + | chr8.4:10134195-10134214 | None:intergenic | 35.0% | |
| CGTGCATATCAAGGAAAAAA+TGG | - | chr8.4:10134411-10134430 | MS.gene26699:CDS | 35.0% | |
| CTAAAAGGAATCATTCACTG+AGG | - | chr8.4:10132857-10132876 | MS.gene26699:CDS | 35.0% | |
| GCACAGATGATAAACGATTA+TGG | - | chr8.4:10132997-10133016 | MS.gene26699:CDS | 35.0% | |
| GGAAATGGAATTTGAATCTG+AGG | - | chr8.4:10132369-10132388 | MS.gene26699:CDS | 35.0% | |
| GTTATGCCTCAAACATTTCA+TGG | - | chr8.4:10133267-10133286 | MS.gene26699:CDS | 35.0% | |
| TAAACGTCCTAAATCATGGA+AGG | - | chr8.4:10134364-10134383 | MS.gene26699:intron | 35.0% | |
| TCAAATTCCATTTCCAAGTG+TGG | + | chr8.4:10132364-10132383 | None:intergenic | 35.0% | |
| TGTAGATTATACACCACACT+TGG | - | chr8.4:10132348-10132367 | MS.gene26699:CDS | 35.0% | |
| TGTTCGAAAAACTTTCACTG+CGG | - | chr8.4:10133512-10133531 | MS.gene26699:CDS | 35.0% | |
| TTATACACCACACTTGGAAA+TGG | - | chr8.4:10132354-10132373 | MS.gene26699:CDS | 35.0% | |
| TTCAAAATCCGAGCAGAAAT+GGG | + | chr8.4:10133358-10133377 | None:intergenic | 35.0% | |
| TTTGGTATTCGTCGAGAATA+TGG | - | chr8.4:10132436-10132455 | MS.gene26699:CDS | 35.0% | |
| ! | ATGATGATGACAATAAGGAG+AGG | - | chr8.4:10133844-10133863 | MS.gene26699:intron | 35.0% |
| ! | GAAAGGACGTCATATTGATT+TGG | - | chr8.4:10134049-10134068 | MS.gene26699:intron | 35.0% |
| ! | TGTCGTAAATTTGAGACACA+TGG | - | chr8.4:10133909-10133928 | MS.gene26699:CDS | 35.0% |
| ! | TGTTGAAGGTGTAGAGAAAT+TGG | - | chr8.4:10132265-10132284 | MS.gene26699:CDS | 35.0% |
| ! | TTTGTTAATTTGACCATCCG+AGG | + | chr8.4:10134116-10134135 | None:intergenic | 35.0% |
| !! | AAGATTCTCGTGCTTTAAAG+AGG | - | chr8.4:10132495-10132514 | MS.gene26699:CDS | 35.0% |
| !! | AGATTCTCGTGCTTTAAAGA+GGG | - | chr8.4:10132496-10132515 | MS.gene26699:CDS | 35.0% |
| !! | GTTGACTCAATATTTTTCCC+AGG | - | chr8.4:10132215-10132234 | MS.gene26699:CDS | 35.0% |
| !! | TAGTCATGCTTTGAAAGTGT+TGG | - | chr8.4:10133941-10133960 | MS.gene26699:CDS | 35.0% |
| !!! | CAGACAAACTGTTGTTTTTG+GGG | - | chr8.4:10133110-10133129 | MS.gene26699:CDS | 35.0% |
| !!! | GCATTCAATTTTTCGAGTGA+AGG | - | chr8.4:10133470-10133489 | MS.gene26699:CDS | 35.0% |
| AGGAATCATTCACTGAGGTA+TGG | - | chr8.4:10132862-10132881 | MS.gene26699:CDS | 40.0% | |
| AGTCCAACAAATACTCCCAA+TGG | + | chr8.4:10133081-10133100 | None:intergenic | 40.0% | |
| AGTGAAGGAAAAATGGGCAT+GGG | - | chr8.4:10133485-10133504 | MS.gene26699:CDS | 40.0% | |
| ATGAGTGAATTTCTTACCCG+TGG | + | chr8.4:10132065-10132084 | None:intergenic | 40.0% | |
| ATGGCTCATTAAGGTTTCCT+GGG | + | chr8.4:10132235-10132254 | None:intergenic | 40.0% | |
| CAATGATTTATGTCCTCGGA+TGG | - | chr8.4:10134100-10134119 | MS.gene26699:intron | 40.0% | |
| CACTTCGAAAGAGTTGTGAA+TGG | - | chr8.4:10133624-10133643 | MS.gene26699:CDS | 40.0% | |
| CTTCAAAATCCGAGCAGAAA+TGG | + | chr8.4:10133359-10133378 | None:intergenic | 40.0% | |
| GAAAGTAATAGGGAGTTTCG+AGG | - | chr8.4:10133866-10133885 | MS.gene26699:intron | 40.0% | |
| GGAAGTAATCGAGATTGGAA+AGG | - | chr8.4:10134032-10134051 | MS.gene26699:CDS | 40.0% | |
| GTTCGAAAAACTTTCACTGC+GGG | - | chr8.4:10133513-10133532 | MS.gene26699:CDS | 40.0% | |
| TATAGCAGGAGAATCGGATT+TGG | - | chr8.4:10132418-10132437 | MS.gene26699:CDS | 40.0% | |
| TCAAAATGCAGCAATGGCAA+AGG | - | chr8.4:10133233-10133252 | MS.gene26699:CDS | 40.0% | |
| TGAATCCGGATTAAAGCCAA+AGG | - | chr8.4:10132750-10132769 | MS.gene26699:CDS | 40.0% | |
| TTGGCTAATAAGCGTACTGA+TGG | - | chr8.4:10134215-10134234 | MS.gene26699:intron | 40.0% | |
| ! | AATGGGAGCTCTTTTGGTAT+AGG | + | chr8.4:10133341-10133360 | None:intergenic | 40.0% |
| ! | ACTTTTCTCAAAGCAATGGG+TGG | - | chr8.4:10133183-10133202 | MS.gene26699:CDS | 40.0% |
| ! | AGAAAAAGGCGTGCATATCA+AGG | - | chr8.4:10134402-10134421 | MS.gene26699:CDS | 40.0% |
| ! | CATTTCATGGACTATGCACT+TGG | - | chr8.4:10133280-10133299 | MS.gene26699:CDS | 40.0% |
| ! | CGTACTGATGGAGAATCAAT+TGG | - | chr8.4:10134227-10134246 | MS.gene26699:intron | 40.0% |
| ! | CTCTAGACTCTTTTGTCAAG+TGG | + | chr8.4:10132546-10132565 | None:intergenic | 40.0% |
| ! | GTTGGTGGAATAGACATAGT+TGG | - | chr8.4:10132799-10132818 | MS.gene26699:CDS | 40.0% |
| !! | ATTGTGTTGGCTGATGAATC+CGG | - | chr8.4:10132736-10132755 | MS.gene26699:CDS | 40.0% |
| AAAGAGCTCCCATTTCTGCT+CGG | - | chr8.4:10133347-10133366 | MS.gene26699:CDS | 45.0% | |
| AACTGGGTGTAAAGCACGTA+TGG | - | chr8.4:10132576-10132595 | MS.gene26699:CDS | 45.0% | |
| AATCACCTTCTTCAACCACC+AGG | - | chr8.4:10132658-10132677 | MS.gene26699:CDS | 45.0% | |
| ACCACCTCTTTGTCATTCCA+CGG | - | chr8.4:10132045-10132064 | MS.gene26699:CDS | 45.0% | |
| AGGGAGTTTCGAGGATCAAA+AGG | - | chr8.4:10133875-10133894 | MS.gene26699:CDS | 45.0% | |
| ATAGGTGGTTCACATGCCTT+AGG | + | chr8.4:10133323-10133342 | None:intergenic | 45.0% | |
| ATCACCTTCTTCAACCACCA+GGG | - | chr8.4:10132659-10132678 | MS.gene26699:CDS | 45.0% | |
| ATCATATGAACGTACCCTGG+TGG | + | chr8.4:10132676-10132695 | None:intergenic | 45.0% | |
| CGAATCATATGAACGTACCC+TGG | + | chr8.4:10132679-10132698 | None:intergenic | 45.0% | |
| CGAGTCCAACAAGATAGTTG+AGG | - | chr8.4:10134187-10134206 | MS.gene26699:CDS | 45.0% | |
| CGCACTATATACTCAAGCGA+TGG | - | chr8.4:10133991-10134010 | MS.gene26699:CDS | 45.0% | |
| CGCTTGAGTATATAGTGCGA+AGG | + | chr8.4:10133990-10134009 | None:intergenic | 45.0% | |
| CTAGAGCAGAAACCAGAACT+GGG | - | chr8.4:10132560-10132579 | MS.gene26699:CDS | 45.0% | |
| GAGTATGTGTCCAAGCAAGT+TGG | - | chr8.4:10132781-10132800 | MS.gene26699:CDS | 45.0% | |
| GAGTGAAGGAAAAATGGGCA+TGG | - | chr8.4:10133484-10133503 | MS.gene26699:CDS | 45.0% | |
| GATGGCTCATTAAGGTTTCC+TGG | + | chr8.4:10132236-10132255 | None:intergenic | 45.0% | |
| GGTCAGGAAGTAATCGAGAT+TGG | - | chr8.4:10134027-10134046 | MS.gene26699:CDS | 45.0% | |
| GTTGGACTCGTCATAGACTT+TGG | + | chr8.4:10134177-10134196 | None:intergenic | 45.0% | |
| TAGGTGGTTCACATGCCTTA+GGG | + | chr8.4:10133322-10133341 | None:intergenic | 45.0% | |
| TCACTGAGGTATGGTGAAGT+AGG | - | chr8.4:10132871-10132890 | MS.gene26699:CDS | 45.0% | |
| TTACCCGTGGAATGACAAAG+AGG | + | chr8.4:10132052-10132071 | None:intergenic | 45.0% | |
| ! | AGCAGAAATGGGAGCTCTTT+TGG | + | chr8.4:10133347-10133366 | None:intergenic | 45.0% |
| ! | GTCTATTCCACCAACTTGCT+TGG | + | chr8.4:10132794-10132813 | None:intergenic | 45.0% |
| ! | TATGTGTCCAAGCAAGTTGG+TGG | - | chr8.4:10132784-10132803 | MS.gene26699:CDS | 45.0% |
| ! | TCTAGAGCAGAAACCAGAAC+TGG | - | chr8.4:10132559-10132578 | MS.gene26699:CDS | 45.0% |
| !! | AATGACAAAGAGGTGGTGGA+CGG | + | chr8.4:10132042-10132061 | None:intergenic | 45.0% |
| !! | CGACCATTGGGAGTATTTGT+TGG | - | chr8.4:10133075-10133094 | MS.gene26699:CDS | 45.0% |
| !! | TGCTTTAAAGAGGGAAAGCG+AGG | - | chr8.4:10132505-10132524 | MS.gene26699:CDS | 45.0% |
| ACGTGCTTTACACCCAGTTC+TGG | + | chr8.4:10132575-10132594 | None:intergenic | 50.0% | |
| AGCGATGGACAAGAGAAGCA+AGG | - | chr8.4:10134006-10134025 | MS.gene26699:CDS | 50.0% | |
| CCACCTCTTTGTCATTCCAC+GGG | - | chr8.4:10132046-10132065 | MS.gene26699:CDS | 50.0% | |
| GCACGTATGCTTGTTCAAGC+CGG | - | chr8.4:10133717-10133736 | MS.gene26699:CDS | 50.0% | |
| GTGGAATGACAAAGAGGTGG+TGG | + | chr8.4:10132046-10132065 | None:intergenic | 50.0% | |
| TGGACAAGAGAAGCAAGGTC+AGG | - | chr8.4:10134011-10134030 | MS.gene26699:CDS | 50.0% | |
| ! | GGGAGCTCTTTTGGTATAGG+TGG | + | chr8.4:10133338-10133357 | None:intergenic | 50.0% |
| CCCGTGGAATGACAAAGAGG+TGG | + | chr8.4:10132049-10132068 | None:intergenic | 55.0% | |
| CGTACCCTGGTGGTTGAAGA+AGG | + | chr8.4:10132666-10132685 | None:intergenic | 55.0% | |
| !! | AGGTGGTGGACGGCCAGAAT+TGG | + | chr8.4:10132032-10132051 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 10132019 | 10134442 | 10132019 | ID=MS.gene26699 |
| chr8.4 | mRNA | 10132019 | 10134442 | 10132019 | ID=MS.gene26699.t1;Parent=MS.gene26699 |
| chr8.4 | exon | 10134394 | 10134442 | 10134394 | ID=MS.gene26699.t1.exon1;Parent=MS.gene26699.t1 |
| chr8.4 | CDS | 10134394 | 10134442 | 10134394 | ID=cds.MS.gene26699.t1;Parent=MS.gene26699.t1 |
| chr8.4 | exon | 10134156 | 10134224 | 10134156 | ID=MS.gene26699.t1.exon2;Parent=MS.gene26699.t1 |
| chr8.4 | CDS | 10134156 | 10134224 | 10134156 | ID=cds.MS.gene26699.t1;Parent=MS.gene26699.t1 |
| chr8.4 | exon | 10133869 | 10134066 | 10133869 | ID=MS.gene26699.t1.exon3;Parent=MS.gene26699.t1 |
| chr8.4 | CDS | 10133869 | 10134066 | 10133869 | ID=cds.MS.gene26699.t1;Parent=MS.gene26699.t1 |
| chr8.4 | exon | 10132019 | 10133781 | 10132019 | ID=MS.gene26699.t1.exon4;Parent=MS.gene26699.t1 |
| chr8.4 | CDS | 10132019 | 10133781 | 10132019 | ID=cds.MS.gene26699.t1;Parent=MS.gene26699.t1 |
| Gene Sequence |
| Protein sequence |
